CMJ_chr3_010090.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_010090.1 vs. ExPASy TrEMBL
Match: A0A2H5PY76|A0A2H5PY76_CITUN (ANK_REP_REGION domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_178320 PE=4 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 3.291e-71 Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0 Query: 1 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPATSHVNDGFRQFYRHFSVLDESTPVRH 104 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPAT HVNDGFRQFYRHFSVLDESTPVRH Sbjct: 1 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSVLDESTPVRH 104
BLAST of CMJ_chr3_010090.1 vs. ExPASy TrEMBL
Match: A0A2H5PY69|A0A2H5PY69_CITUN (ANK_REP_REGION domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_178320 PE=4 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 2.403e-70 Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0 Query: 1 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPATSHVNDGFRQFYRHFSVLDESTPVRH 104 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPAT HVNDGFRQFYRHFSVLDESTPVRH Sbjct: 68 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSVLDESTPVRH 171 HSP 2 Score: 108.612 bits (270), Expect = 1.282e-27 Identity = 49/52 (94.23%), Postives = 51/52 (98.08%), Query Frame = 0 Query: 50 NKTLQNMDRKTPIDVAKLNSQHDMLKLPATSHVNDGFRQFYRHFSVLDESTP 101 ++TLQNMDRKTPIDVAKLNSQHDMLKLPAT HVNDGFRQFYRHFSVLDESTP Sbjct: 15 SRTLQNMDRKTPIDVAKLNSQHDMLKLPATPHVNDGFRQFYRHFSVLDESTP 66
BLAST of CMJ_chr3_010090.1 vs. ExPASy TrEMBL
Match: A0A2H5QMD7|A0A2H5QMD7_CITUN (ANK_REP_REGION domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_243660 PE=4 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.745e-54 Identity = 83/86 (96.51%), Postives = 84/86 (97.67%), Query Frame = 0 Query: 1 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPATSHVNDGF 86 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLL+AGANVD VDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPAT HVNDGF Sbjct: 64 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLKAGANVDVVDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPATPHVNDGF 149
BLAST of CMJ_chr3_010090.1 vs. ExPASy TrEMBL
Match: A0A2H5QMC3|A0A2H5QMC3_CITUN (ANK_REP_REGION domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_243660 PE=4 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.218e-50 Identity = 77/80 (96.25%), Postives = 78/80 (97.50%), Query Frame = 0 Query: 7 ASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPATSHVNDGF 86 ASANKDEEDLEGRTTLHFACGYGEVECAQLLL+AGANVD VDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPAT HVNDGF Sbjct: 57 ASANKDEEDLEGRTTLHFACGYGEVECAQLLLKAGANVDVVDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPATPHVNDGF 136
BLAST of CMJ_chr3_010090.1 vs. ExPASy TrEMBL
Match: A0A2H5QLL5|A0A2H5QLL5_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_241670 PE=4 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.080e-44 Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0 Query: 30 EVECAQLLLEAGANVDAVDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPATSHVNDGFRQFYRHFSVLDESTPVRH 104 +VECAQLLLE GANVD VDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPAT HVNDGFRQFYRHFSVLDEST VRH Sbjct: 28 DVECAQLLLEVGANVDVVDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPATPHVNDGFRQFYRHFSVLDESTSVRH 102
BLAST of CMJ_chr3_010090.1 vs. ExPASy TrEMBL
Match: A0A1S8AD73|A0A1S8AD73_CITLI (Ankyrin repeat-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.586e-33 Identity = 59/73 (80.82%), Postives = 60/73 (82.19%), Query Frame = 0 Query: 32 ECAQLLLEAGANVDAVDKNKTLQNMDRKTPIDVAKLNSQHDMLKLPATSHVNDGFRQFYRHFSVLDESTPVRH 104 EC LL+ GA V TLQNMDRKTPIDVAKLNSQHDMLKLPAT HVNDGFRQFYRHFSVLDESTPVRH Sbjct: 2 ECVAPLLKNGAAV-------TLQNMDRKTPIDVAKLNSQHDMLKLPATPHVNDGFRQFYRHFSVLDESTPVRH 67
BLAST of CMJ_chr3_010090.1 vs. ExPASy TrEMBL
Match: A0A2H5PY59|A0A2H5PY59_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_178320 PE=4 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.005e-31 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0 Query: 50 NKTLQNMDRKTPIDVAKLNSQHDMLKLPATSHVNDGFRQFYRHFSVLDESTPVRH 104 ++TLQNMDRKTPIDVAKLNSQHDMLKLPAT HVNDGFRQFYRHFSVLDESTPVRH Sbjct: 15 SRTLQNMDRKTPIDVAKLNSQHDMLKLPATPHVNDGFRQFYRHFSVLDESTPVRH 69
BLAST of CMJ_chr3_010090.1 vs. ExPASy TrEMBL
Match: A0A067E571|A0A067E571_CITSI (ANK_REP_REGION domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g018578mg PE=4 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.717e-31 Identity = 64/102 (62.75%), Postives = 70/102 (68.63%), Query Frame = 0 Query: 1 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNK--------------------------TLQNMDRKTPIDVAKLNSQHDMLKL 76 +K LAA A+KDEED EGRT LHFACGYGEV+CAQ+LLEAGANVDA+DKNK TLQNMD KTPIDVAKLNSQHD+LKL Sbjct: 226 LKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKL 327
BLAST of CMJ_chr3_010090.1 vs. ExPASy TrEMBL
Match: A0A067E567|A0A067E567_CITSI (ANK_REP_REGION domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g018578mg PE=4 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 6.714e-31 Identity = 64/102 (62.75%), Postives = 70/102 (68.63%), Query Frame = 0 Query: 1 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNK--------------------------TLQNMDRKTPIDVAKLNSQHDMLKL 76 +K LAA A+KDEED EGRT LHFACGYGEV+CAQ+LLEAGANVDA+DKNK TLQNMD KTPIDVAKLNSQHD+LKL Sbjct: 245 LKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKL 346
BLAST of CMJ_chr3_010090.1 vs. ExPASy TrEMBL
Match: A0A067E1Z6|A0A067E1Z6_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035417mg PE=4 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 9.357e-31 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0 Query: 52 TLQNMDRKTPIDVAKLNSQHDMLKLPATSHVNDGFRQFYRHFSVLDESTPVRH 104 TLQNMDRKTPIDVAKLNSQHDMLKLPAT HVNDGFRQFYRHFSVLDESTPVRH Sbjct: 9 TLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSVLDESTPVRH 61
BLAST of CMJ_chr3_010090.1 vs. ExPASy Swiss-Prot
Match: AKR2A_ARATH (Ankyrin repeat domain-containing protein 2A OS=Arabidopsis thaliana OX=3702 GN=AKR2A PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 6.316e-28 Identity = 55/102 (53.92%), Postives = 68/102 (66.67%), Query Frame = 0 Query: 1 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNK--------------------------TLQNMDRKTPIDVAKLNSQHDMLKL 76 +K LA+ NKDEED EGRT LHFACGYGE++CAQ+L++AGA+V+AVDKNK TLQN+D KTPIDVAKLNSQ +++KL Sbjct: 234 LKAALASGGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKNKNTPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKL 335
BLAST of CMJ_chr3_010090.1 vs. ExPASy Swiss-Prot
Match: AKR2B_ARATH (Ankyrin repeat domain-containing protein 2B OS=Arabidopsis thaliana OX=3702 GN=AKR2B PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.626e-27 Identity = 54/102 (52.94%), Postives = 64/102 (62.75%), Query Frame = 0 Query: 1 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNK--------------------------TLQNMDRKTPIDVAKLNSQHDMLKL 76 +K LA+ NKDEED EGRT LHFACGYGEV CAQ+LL+AGAN +A+DKNK T QNMD K PIDVA+LN+Q D++KL Sbjct: 236 LKAALASGGNKDEEDSEGRTALHFACGYGEVRCAQVLLDAGANANAIDKNKNTPLHYAAGYGRKECVSLLLENGAAVTQQNMDNKNPIDVARLNNQLDVVKL 337
BLAST of CMJ_chr3_010090.1 vs. Araport11
Match: AT4G35450.4 (| ankyrin repeat-containing protein 2 | Chr4:16840072-16841759 FORWARD LENGTH=304 | 201606) HSP 1 Score: 106.301 bits (264), Expect = 5.305e-29 Identity = 55/102 (53.92%), Postives = 68/102 (66.67%), Query Frame = 0 Query: 1 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNK--------------------------TLQNMDRKTPIDVAKLNSQHDMLKL 76 +K LA+ NKDEED EGRT LHFACGYGE++CAQ+L++AGA+V+AVDKNK TLQN+D KTPIDVAKLNSQ +++KL Sbjct: 196 LKAALASGGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKNKNTPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKL 297
BLAST of CMJ_chr3_010090.1 vs. Araport11
Match: AT4G35450.3 (| ankyrin repeat-containing protein 2 | Chr4:16839862-16841759 FORWARD LENGTH=342 | 201606) HSP 1 Score: 106.686 bits (265), Expect = 6.462e-29 Identity = 55/102 (53.92%), Postives = 68/102 (66.67%), Query Frame = 0 Query: 1 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNK--------------------------TLQNMDRKTPIDVAKLNSQHDMLKL 76 +K LA+ NKDEED EGRT LHFACGYGE++CAQ+L++AGA+V+AVDKNK TLQN+D KTPIDVAKLNSQ +++KL Sbjct: 234 LKAALASGGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKNKNTPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKL 335
BLAST of CMJ_chr3_010090.1 vs. Araport11
Match: AT4G35450.2 (| ankyrin repeat-containing protein 2 | Chr4:16839862-16841759 FORWARD LENGTH=342 | 201606) HSP 1 Score: 106.686 bits (265), Expect = 6.462e-29 Identity = 55/102 (53.92%), Postives = 68/102 (66.67%), Query Frame = 0 Query: 1 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNK--------------------------TLQNMDRKTPIDVAKLNSQHDMLKL 76 +K LA+ NKDEED EGRT LHFACGYGE++CAQ+L++AGA+V+AVDKNK TLQN+D KTPIDVAKLNSQ +++KL Sbjct: 234 LKAALASGGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKNKNTPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKL 335
BLAST of CMJ_chr3_010090.1 vs. Araport11
Match: AT4G35450.1 (| ankyrin repeat-containing protein 2 | Chr4:16839862-16841759 FORWARD LENGTH=342 | 201606) HSP 1 Score: 106.686 bits (265), Expect = 6.462e-29 Identity = 55/102 (53.92%), Postives = 68/102 (66.67%), Query Frame = 0 Query: 1 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNK--------------------------TLQNMDRKTPIDVAKLNSQHDMLKL 76 +K LA+ NKDEED EGRT LHFACGYGE++CAQ+L++AGA+V+AVDKNK TLQN+D KTPIDVAKLNSQ +++KL Sbjct: 234 LKAALASGGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKNKNTPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKL 335
BLAST of CMJ_chr3_010090.1 vs. Araport11
Match: AT4G35450.5 (| ankyrin repeat-containing protein 2 | Chr4:16839862-16841759 FORWARD LENGTH=350 | 201606) HSP 1 Score: 106.301 bits (264), Expect = 1.082e-28 Identity = 55/102 (53.92%), Postives = 68/102 (66.67%), Query Frame = 0 Query: 1 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNK--------------------------TLQNMDRKTPIDVAKLNSQHDMLKL 76 +K LA+ NKDEED EGRT LHFACGYGE++CAQ+L++AGA+V+AVDKNK TLQN+D KTPIDVAKLNSQ +++KL Sbjct: 242 LKAALASGGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKNKNTPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKL 343
BLAST of CMJ_chr3_010090.1 vs. Araport11
Match: AT2G17390.1 (| ankyrin repeat-containing 2B | Chr2:7555870-7557743 FORWARD LENGTH=344 | 201606) HSP 1 Score: 104.76 bits (260), Expect = 3.710e-28 Identity = 54/102 (52.94%), Postives = 64/102 (62.75%), Query Frame = 0 Query: 1 MKYKLAASANKDEEDLEGRTTLHFACGYGEVECAQLLLEAGANVDAVDKNK--------------------------TLQNMDRKTPIDVAKLNSQHDMLKL 76 +K LA+ NKDEED EGRT LHFACGYGEV CAQ+LL+AGAN +A+DKNK T QNMD K PIDVA+LN+Q D++KL Sbjct: 236 LKAALASGGNKDEEDSEGRTALHFACGYGEVRCAQVLLDAGANANAIDKNKNTPLHYAAGYGRKECVSLLLENGAAVTQQNMDNKNPIDVARLNNQLDVVKL 337 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_010090.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_010090.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 2 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_010090.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 6 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_010090.1_cmj_v1 ID=CMJ_chr3_010090.1_cmj_v1; Name=CMJ_chr3_010090.1; organism=Citrus maxima; type=mRNA; length=315bpback to top protein sequence of CMJ_chr3_010090.1_cmj_v1 >CMJ_chr3_010090.1_cmj_v1 ID=CMJ_chr3_010090.1_cmj_v1; Name=CMJ_chr3_010090.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=105bpback to top mRNA from alignment at chr3:26482729..26483563+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=835bp; location=Sequence derived from: chr3:26482729..26483563+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:26482729..26483563+ >CMJ_chr3_010090.1_cmj_v1 ID=CMJ_chr3_010090.1_cmj_v1; Name=CMJ_chr3_010090.1; organism=Citrus maxima; type=CDS; length=315bp; location=Sequence derived from: chr3:26482729..26483563+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|