CMJ_chr3_010690.2
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of CMJ_chr3_010690.2 vs. ExPASy TrEMBL
Match: A0A2H5MZK5|A0A2H5MZK5_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_275050 PE=4 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 6.720e-67 Identity = 112/141 (79.43%), Postives = 117/141 (82.98%), Query Frame = 0 Query: 11 RKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQAKFVWHANQVDPGKFNKFLVWRSEIGLCNSRAFQVRLFDSTHYLKAFGIGDVWVAVGGSSDVLPAVKCMSN 151 R L + DWKD W+PELAGRISMVNSPREVIGSVLKY ASYNSN+IDSQVAGGK+AVQQNLALL NQ N VDPGKF+K LVWRSEIGLCNS AFQVRLFDSTHYLKAF IGDVWVAVG SDVLPAVK MSN Sbjct: 148 RILSLNTVNDWKDPWQPELAGRISMVNSPREVIGSVLKYRVASYNSNDIDSQVAGGKIAVQQNLALLANQEDS--RCNHVDPGKFDKVLVWRSEIGLCNSGAFQVRLFDSTHYLKAFAIGDVWVAVGWISDVLPAVKHMSN 286
BLAST of CMJ_chr3_010690.2 vs. ExPASy TrEMBL
Match: A0A067E9C7|A0A067E9C7_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g016927mg PE=4 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 1.716e-64 Identity = 109/151 (72.19%), Postives = 113/151 (74.83%), Query Frame = 0 Query: 1 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQAKFVWHANQVDPGKFNKFLVWRSEIGLCNSRAFQVRLFDSTHYLKAFGIGDVWVAVGGSSDVLPAVKCMSN 151 M+IAYKKSKFRKH+LAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID QVAGGK++VQQNLALL NQA RLFDSTHYLKAFGIGDVWVAVG SSDVLPAVK MSN Sbjct: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA----------------------------------RLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN 117
BLAST of CMJ_chr3_010690.2 vs. ExPASy TrEMBL
Match: A0A2H5PM90|A0A2H5PM90_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_149460 PE=4 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 2.197e-63 Identity = 108/151 (71.52%), Postives = 113/151 (74.83%), Query Frame = 0 Query: 1 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQAKFVWHANQVDPGKFNKFLVWRSEIGLCNSRAFQVRLFDSTHYLKAFGIGDVWVAVGGSSDVLPAVKCMSN 151 M+IAYKKSKFRKH+LAPIEDWKDLW+PELAGRISMVNSPREVIGSVLKYMGASYNSN+IDSQVAGGK+AVQQNLALL N QVRLFDSTHYL AFGIGDVWVAVG SSDVLPAVK MSN Sbjct: 1 MVIAYKKSKFRKHNLAPIEDWKDLWQPELAGRISMVNSPREVIGSVLKYMGASYNSNDIDSQVAGGKIAVQQNLALLAN----------------------------------QVRLFDSTHYLIAFGIGDVWVAVGWSSDVLPAVKRMSN 117
BLAST of CMJ_chr3_010690.2 vs. ExPASy TrEMBL
Match: A0A067DXW9|A0A067DXW9_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g016927mg PE=4 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.518e-62 Identity = 109/151 (72.19%), Postives = 113/151 (74.83%), Query Frame = 0 Query: 1 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQAKFVWHANQVDPGKFNKFLVWRSEIGLCNSRAFQVRLFDSTHYLKAFGIGDVWVAVGGSSDVLPAVKCMSN 151 M+IAYKKSKFRKH+LAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID QVAGGK++VQQNLALL NQA RLFDSTHYLKAFGIGDVWVAVG SSDVLPAVK MSN Sbjct: 108 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA----------------------------------RLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN 224
BLAST of CMJ_chr3_010690.2 vs. ExPASy TrEMBL
Match: A0A2H5PM75|A0A2H5PM75_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_149330 PE=4 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 4.384e-61 Identity = 108/151 (71.52%), Postives = 114/151 (75.50%), Query Frame = 0 Query: 1 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQAKFVWHANQVDPGKFNKFLVWRSEIGLCNSRAFQVRLFDSTHYLKAFGIGDVWVAVGGSSDVLPAVKCMSN 151 ++IAYKKSKFRKH+LAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGK++VQQNLALL N +VRLFDSTHYLKAFGIGDVWVAVG SSDVLPAVK MSN Sbjct: 250 VVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKISVQQNLALLAN----------------------------------RVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN 366
BLAST of CMJ_chr3_010690.2 vs. ExPASy TrEMBL
Match: A0A2H5PM77|A0A2H5PM77_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_149330 PE=4 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 7.972e-61 Identity = 108/151 (71.52%), Postives = 114/151 (75.50%), Query Frame = 0 Query: 1 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQAKFVWHANQVDPGKFNKFLVWRSEIGLCNSRAFQVRLFDSTHYLKAFGIGDVWVAVGGSSDVLPAVKCMSN 151 ++IAYKKSKFRKH+LAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGK++VQQNLALL N +VRLFDSTHYLKAFGIGDVWVAVG SSDVLPAVK MSN Sbjct: 263 VVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKISVQQNLALLAN----------------------------------RVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN 379
BLAST of CMJ_chr3_010690.2 vs. ExPASy TrEMBL
Match: A0A2H5QM65|A0A2H5QM65_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_243150 PE=4 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 5.996e-60 Identity = 105/151 (69.54%), Postives = 108/151 (71.52%), Query Frame = 0 Query: 1 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQAKFVWHANQVDPGKFNKFLVWRSEIGLCNSRAFQVRLFDSTHYLKAFGIGDVWVAVGGSSDVLPAVKCMSN 151 M I YKKSKF+ H+LAPIEDWKD W PELAGRISMVNSPREVIGSVLKYMGASYNSNNID QVAGGK+AVQQNLALL N QVRLFDSTHYLKAFGIGDVWVAVG SSDVLPAVK MSN Sbjct: 21 MAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKIAVQQNLALLAN----------------------------------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN 137
BLAST of CMJ_chr3_010690.2 vs. ExPASy TrEMBL
Match: A0A2H5QM52|A0A2H5QM52_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_243150 PE=4 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.987e-57 Identity = 105/151 (69.54%), Postives = 108/151 (71.52%), Query Frame = 0 Query: 1 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQAKFVWHANQVDPGKFNKFLVWRSEIGLCNSRAFQVRLFDSTHYLKAFGIGDVWVAVGGSSDVLPAVKCMSN 151 M I YKKSKF+ H+LAPIEDWKD W PELAGRISMVNSPREVIGSVLKYMGASYNSNNID QVAGGK+AVQQNLALL N QVRLFDSTHYLKAFGIGDVWVAVG SSDVLPAVK MSN Sbjct: 256 MAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKIAVQQNLALLAN----------------------------------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN 372
BLAST of CMJ_chr3_010690.2 vs. ExPASy TrEMBL
Match: A0A2H5Q748|A0A2H5Q748_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_202050 PE=4 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.328e-52 Identity = 109/196 (55.61%), Postives = 115/196 (58.67%), Query Frame = 0 Query: 1 MMIAYKKSKFRKHDLAPIE---------------------------------------------DWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQAKFVWHANQVDPGKFNKFLVWRSEIGLCNSRAFQVRLFDSTHYLKAFGIGDVWVAVGGSSDVLPAVKCMSN 151 M+IAYKKSKFRKH+LAPIE DWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID QVAGGK++VQQNLALL NQ + S + VRLFDSTHYLKAFGI DVWVAVG SSDVLPAVK MSN Sbjct: 263 MVIAYKKSKFRKHNLAPIETAFLFNIFDDNIFRSISLTGSYEGGGIFRFLRPHSRHHPGSKEGADWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQ--------------------------MLISLSIPVRLFDSTHYLKAFGIRDVWVAVGWSSDVLPAVKRMSN 432
BLAST of CMJ_chr3_010690.2 vs. ExPASy TrEMBL
Match: A0A151QVX8|A0A151QVX8_CAJCA (Spermidine/putrescine-binding periplasmic protein 1 OS=Cajanus cajan OX=3821 GN=KK1_044521 PE=4 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 5.864e-51 Identity = 87/151 (57.62%), Postives = 107/151 (70.86%), Query Frame = 0 Query: 1 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQAKFVWHANQVDPGKFNKFLVWRSEIGLCNSRAFQVRLFDSTHYLKAFGIGDVWVAVGGSSDVLPAVKCMSN 151 M+IAYK +KF+KH LAPIEDW DLWRP+LAGRISMV+SPREV+G+VLKYMGASYN+N+I+++V GG+ AV+ NLALL A QVRLFDS++YLKAFG+GDVWVAVG SSD++PA K +SN Sbjct: 1 MVIAYKTNKFQKHKLAPIEDWADLWRPDLAGRISMVDSPREVVGAVLKYMGASYNTNDINAEVNGGRDAVKHNLALL----------------------------------AKQVRLFDSSNYLKAFGVGDVWVAVGWSSDIIPAAKRLSN 117
BLAST of CMJ_chr3_010690.2 vs. Araport11
Match: AT1G31410.1 (| putrescine-binding periplasmic protein-like protein | Chr1:11247094-11249345 REVERSE LENGTH=524 | 201606) HSP 1 Score: 166.392 bits (420), Expect = 2.080e-49 Identity = 84/151 (55.63%), Postives = 101/151 (66.89%), Query Frame = 0 Query: 1 MMIAYKKSKFRKHDLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDSQVAGGKVAVQQNLALLQNQAKFVWHANQVDPGKFNKFLVWRSEIGLCNSRAFQVRLFDSTHYLKAFGIGDVWVAVGGSSDVLPAVKCMSN 151 M+IAYKKSKF+ + LAPIEDW DLWRPELAGRI+MVNSPREV+G+VLKYM ASYN+ ++DSQV GG++AV++NLA L Q+RLFDS +YLKAF +GDVWV VG SSDV+P K MSN Sbjct: 244 MVIAYKKSKFQNYKLAPIEDWADLWRPELAGRIAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEKNLASLMK----------------------------------QIRLFDSNNYLKAFNVGDVWVTVGWSSDVIPVAKRMSN 360 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_010690.2 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_010690.2 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_010690.2 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 1 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_010690.2_cmj_v1 ID=CMJ_chr3_010690.2_cmj_v1; Name=CMJ_chr3_010690.2; organism=Citrus maxima; type=mRNA; length=456bpback to top protein sequence of CMJ_chr3_010690.2_cmj_v1 >CMJ_chr3_010690.2_cmj_v1 ID=CMJ_chr3_010690.2_cmj_v1; Name=CMJ_chr3_010690.2_cmj_v1; organism=Citrus maxima; type=polypeptide; length=152bpback to top mRNA from alignment at chr3:27355785..27360310- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=4526bp; location=Sequence derived from: chr3:27355785..27360310- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:27355785..27360310- >CMJ_chr3_010690.2_cmj_v1 ID=CMJ_chr3_010690.2_cmj_v1; Name=CMJ_chr3_010690.2; organism=Citrus maxima; type=CDS; length=456bp; location=Sequence derived from: chr3:27355785..27360310- (Citrus maximaback to top |