CMJ_chr3_013200.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_013200.1 vs. ExPASy TrEMBL
Match: V4SFR5|V4SFR5_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001229mg PE=3 SV=1) HSP 1 Score: 466.077 bits (1198), Expect = 1.522e-161 Identity = 265/336 (78.87%), Postives = 275/336 (81.85%), Query Frame = 0 Query: 1 MENEEQNNESAKTQPPQSKKKTIITIPSYQEVINSTNPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPANPPTTSQNPTLSQGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDV---------------------------EECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFG-----------------------VKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSSMNEVTKVKKDTEE 286
MENEEQNNESAK QPPQ+KKKTIITIPSYQEVIN+TNPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPANPPTTSQNPTLSQGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLK+IRNVRWAFADVVCDYL+GQNSCALYLSLRYHLLHPDYLYY IRELQKNF LR VLCHVDV EECG YLETIKVYENKPADLIQGQ+DTDYLS+LTHALTSV SVNKTDVVTL STFG VK LYDTFHEPFKRVVS HPPIPETPS KDVE SS+NEVT+V+KDTE+
Sbjct: 37 MENEEQNNESAKAQPPQNKKKTIITIPSYQEVINATNPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPANPPTTSQNPTLSQGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLKYIRNVRWAFADVVCDYLVGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRIVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLTHALTSVRSVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVSSHPPIPETPSQKDVERSSVNEVTEVEKDTED 372
BLAST of CMJ_chr3_013200.1 vs. ExPASy TrEMBL
Match: A0A2H5PAR5|A0A2H5PAR5_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_117240 PE=3 SV=1) HSP 1 Score: 409.838 bits (1052), Expect = 2.798e-141 Identity = 238/302 (78.81%), Postives = 244/302 (80.79%), Query Frame = 0 Query: 1 MENEEQNNESAKTQPPQSKKKTIITIPSYQEVINSTNPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPANPPTTSQNPTLSQGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDV---------------------------EECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFG-----------------------VKCLYDTFHEPFKR 252
MENEEQNNESAK QPPQ+KKKTIITIPSYQEVIN+TNPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPANPPTTSQNPTLSQGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLK+IRNVRWAFAD+VCDYLLGQNSCALYLSLRYHLLHPDYLYY IRELQKNF LR VLCHVDV EECG YLETIKVYENKPADLIQGQ+DTDYLS+LTHALTSV SVNKTDVVTL STFG VK LYDTFHEPFKR
Sbjct: 1 MENEEQNNESAKAQPPQNKKKTIITIPSYQEVINATNPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPANPPTTSQNPTLSQGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLKYIRNVRWAFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLTHALTSVRSVNKTDVVTLGSTFGSLLHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKR 302
BLAST of CMJ_chr3_013200.1 vs. ExPASy TrEMBL
Match: V4T061|V4T061_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003828mg PE=3 SV=1) HSP 1 Score: 395.971 bits (1016), Expect = 7.438e-136 Identity = 199/263 (75.67%), Postives = 205/263 (77.95%), Query Frame = 0 Query: 76 SQNPTLSQGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDVE----------------------------------------------------ECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFGVKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSSMNEVTKVKKDTEE 286
S +PT SQGGEQ+VGTASA ASSSQSIQSRNAILVS QKGNPLLKH+RN+RWAFADVVC YLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCH+DVE ECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTL+STFGVKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSSMNEVTKVKKDTEE
Sbjct: 3 SISPT-SQGGEQSVGTASALASSSQSIQSRNAILVSHSQKGNPLLKHLRNMRWAFADVVCGYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHLDVEDVVKPLLEVTKTTLLHDCTLLCAWRNKIMSKILFVELGLQHCCHCLILFTSEECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLQSTFGVKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSSMNEVTKVKKDTEE 264
BLAST of CMJ_chr3_013200.1 vs. ExPASy TrEMBL
Match: A0A5C7I906|A0A5C7I906_9ROSI (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_006886 PE=3 SV=1) HSP 1 Score: 393.66 bits (1010), Expect = 1.373e-133 Identity = 217/349 (62.18%), Postives = 237/349 (67.91%), Query Frame = 0 Query: 1 MENEEQNNESAKTQPPQSKKKTIITIPSYQEVINST----NPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPANPPTTSQNPTLSQGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDV---------------------------EECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFG-----------------------VKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPS-SMNEVTKVKKDTEERKQNVGRK 294
ME E+Q E A TQ +KKKT ITIPSYQEVI S+ P QNLF PSQSFSQAFSFIKSSEFY PP TT+QNPT SQ G NV A+ S S SQ QSRNAILVS RQKGNPLLKHIRNVRWAFADVVCDY+LGQNSCALYLSLRYHLLHPDYLYY IRELQKNF LR VLCH+DV EECG YLETIKVYENKPADLIQGQ+D+DYLS+LTH+LT+V SVNKTDVVTL STFG VK L+DTFHEPFKRVV+ HP +PETP KD EP E T V+KDT++ + +K
Sbjct: 1 MEKEDQPTEPAATQ---NKKKTTITIPSYQEVIESSEIKSTPTQNLFAPSQSFSQAFSFIKSSEFYEPPVKS-----TTTQNPTSSQSGASNVVVATTS-SQSQYNQSRNAILVSHRQKGNPLLKHIRNVRWAFADVVCDYMLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHIDVDDVVKPLLEVTKTAMLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDSDYLSRLTHSLTTVRSVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLHDTFHEPFKRVVTSHPSVPETPVQKDAEPCLETEEATGVEKDTDDTSKKRRKK 340
BLAST of CMJ_chr3_013200.1 vs. ExPASy TrEMBL
Match: A0A2H5P9Z6|A0A2H5P9Z6_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_117190 PE=3 SV=1) HSP 1 Score: 379.407 bits (973), Expect = 2.594e-129 Identity = 198/253 (78.26%), Postives = 201/253 (79.45%), Query Frame = 0 Query: 83 QGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDVE---------------------------------------------ECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFGVKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSSMNEVTKVKKDTEERKQN 290
QGGEQ VGTASA ASSSQSIQSRNAILVS QKGNPLLKHIRN+RWAFADVVC YLLGQNSCALYLSLRYHLLHPDYLY+ IRELQKNFMLRFVLCHVDVE ECGCYLETIKVYENK ADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFGVKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSS+NEVTKVKKDTEERKQN
Sbjct: 1 QGGEQIVGTASALASSSQSIQSRNAILVSHSQKGNPLLKHIRNMRWAFADVVCGYLLGQNSCALYLSLRYHLLHPDYLYHRIRELQKNFMLRFVLCHVDVEDVVKPLLKVTKTTLLHDCTLLCAWRNKIMSRYCLWNWDFNTAVTEECGCYLETIKVYENKQADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFGVKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSSVNEVTKVKKDTEERKQN 253
BLAST of CMJ_chr3_013200.1 vs. ExPASy TrEMBL
Match: A0A2H5P9Y5|A0A2H5P9Y5_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_117190 PE=3 SV=1) HSP 1 Score: 370.163 bits (949), Expect = 7.661e-126 Identity = 194/249 (77.91%), Postives = 197/249 (79.12%), Query Frame = 0 Query: 83 QGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDVE---------------------------------------------ECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFGVKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSSMNEVTKVKKDTEE 286
QGGEQ VGTASA ASSSQSIQSRNAILVS QKGNPLLKHIRN+RWAFADVVC YLLGQNSCALYLSLRYHLLHPDYLY+ IRELQKNFMLRFVLCHVDVE ECGCYLETIKVYENK ADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFGVKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSS+NEVTKVKKDTEE
Sbjct: 1 QGGEQIVGTASALASSSQSIQSRNAILVSHSQKGNPLLKHIRNMRWAFADVVCGYLLGQNSCALYLSLRYHLLHPDYLYHRIRELQKNFMLRFVLCHVDVEDVVKPLLKVTKTTLLHDCTLLCAWRNKIMSRYCLWNWDFNTAVTEECGCYLETIKVYENKQADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFGVKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSSVNEVTKVKKDTEE 249
BLAST of CMJ_chr3_013200.1 vs. ExPASy TrEMBL
Match: A0A540M5L0|A0A540M5L0_MALBA (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_020377 PE=3 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 5.567e-121 Identity = 195/355 (54.93%), Postives = 237/355 (66.76%), Query Frame = 0 Query: 1 MENEEQNNESAKTQPPQSKKKTIITIPSYQEVINST---NPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPA--NPPTTSQNPTLSQGGEQNVGTASAS----ASSSQSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDV---------------------------EECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFG-----------------------VKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSSMNEVTKVKKDTEERKQNVGRKNR 296
ME+E+ +S ++ ++KKKT+I IPS+QEV+ S+ + P +LFTPS SFSQAF+F+KSSEFY+PPPP A PP S Q G+ +V ++S++ +SS S+Q RNAILVS RQKGNPLLKHIRNVRW FAD+VCDYLLGQ+SCALYLSLRYHLLHPDYLY+ IRELQKNF LR VLCHVDV EECG YLETIKVYENKPAD+IQGQ+DTDYLS+L HALT+V VNKTDVVTL +TFG VK LYDTFHEPFKRVV+ P +PET + EP S++E ++ +E K+ G+K R
Sbjct: 1 MEDED-GGKSTESDLNKNKKKTVIKIPSFQEVLESSQSKSTPPSLFTPSHSFSQAFAFVKSSEFYSPPPPSTAASQPPQASDATNSRQTGQSDVPSSSSAPANAVASSSSVQRRNAILVSHRQKGNPLLKHIRNVRWEFADIVCDYLLGQSSCALYLSLRYHLLHPDYLYFRIRELQKNFKLRVVLCHVDVEDVIKPLLEVTKTALLHECTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSRLNHALTTVRHVNKTDVVTLGTTFGSLSHIMDVSMEDLARCPGIGELKVKRLYDTFHEPFKRVVASRPAVPETSVPSNAEPRSVDEDKAAEETEDESKR--GKKER 352
BLAST of CMJ_chr3_013200.1 vs. ExPASy TrEMBL
Match: A0A5N5MM86|A0A5N5MM86_9ROSI (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_007184 PE=3 SV=1) HSP 1 Score: 350.517 bits (898), Expect = 2.201e-116 Identity = 198/337 (58.75%), Postives = 222/337 (65.88%), Query Frame = 0 Query: 3 NEEQNNESAKTQPPQSKKKTIITIPSYQEVINST--NPPQ----NLFTPSQSFSQAFSFIKSSEFYNPPPPP-------PANPPTTSQNPTLSQGGEQNVGTASASASSS-QSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDV---------------------------EECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFG-----------------------VKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSSMN 275
EEQN +S+ TQ KK +I IPSYQEV S+ P Q +LF PSQ+FSQAFSFIK+SEFY+PPPPP P++ TTS+ + S + ASSS QS +SRNAILVS RQKGNPLL HIRNVRWAF DVVCDYLLGQ+SCALYLSLRYHLLHPDYLYY IRELQKN+ LR VLCH+DV EECG YLETIK+YENKPADLIQGQ+DTDY S+L HALT+V VNKTDVVTL STFG VK LYDTFHEPFKRVVS HP +P+TP KD EPSS+N
Sbjct: 7 GEEQNTDSS-TQ----NKKVMIQIPSYQEVFESSQVKPKQTQESSLFKPSQTFSQAFSFIKNSEFYSPPPPPTSKNEHGPSSSATTSEKVSPSPSAAAPAASFGGVASSSVQSNKSRNAILVSHRQKGNPLLNHIRNVRWAFEDVVCDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNYKLRVVLCHIDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYSSRLHHALTTVRRVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVSSHPVVPQTPVQKDTEPSSVN 338
BLAST of CMJ_chr3_013200.1 vs. ExPASy TrEMBL
Match: A0A6M2EW27|A0A6M2EW27_9ROSI (Uncharacterized protein OS=Populus davidiana OX=266767 PE=3 SV=1) HSP 1 Score: 348.206 bits (892), Expect = 1.965e-115 Identity = 209/366 (57.10%), Postives = 233/366 (63.66%), Query Frame = 0 Query: 1 MENEEQNNESAKTQPPQSKKKTIITIPSYQEVINST--NPPQ----NLFTPSQSFSQAFSFIKSSEFYNPPPP-------PPANPPTTSQN---------PTLSQGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDV---------------------------EECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFG-----------------------VKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSSMNEVTKVKKDTEERKQNVGRK 294
ME EE+ E T KK +I IPSYQEVI S+ P Q +LF PSQ+FSQAFSFIK+SEFY+PPPP P++ TTS+ P S GG G AS SS Q+ QSRNAILVS RQKGNPLLKHIRNV+WAFADVVCDYLLGQ+SCALYLSLRYHLLHPDYLYY IRELQKN LR VLCHVDV EECG YLETIK+YENKPADLIQGQ+DTDY S+L HALT+V VNKTDVVTL STFG VK LYDTFHEPFKRVVS HP +P+TP KD EPSS+NEV ++ + +E N RK
Sbjct: 1 MEREERGEEQ-NTNSSNQNKKVLIQIPSYQEVIESSQVKPTQTQESSLFKPSQTFSQAFSFIKNSEFYSPPPPPPSKSEHGPSSSATTSEKVSPSPLASAPAASFGG----GVAS---SSVQNNQSRNAILVSHRQKGNPLLKHIRNVKWAFADVVCDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNCKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYSSRLHHALTTVRRVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVSSHPVVPQTPVQKDTEPSSVNEVAEM--EMKEANANKRRK 356
BLAST of CMJ_chr3_013200.1 vs. ExPASy TrEMBL
Match: A0A5D2MN13|A0A5D2MN13_GOSTO (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A13G210400v1 PE=3 SV=1) HSP 1 Score: 347.051 bits (889), Expect = 4.558e-115 Identity = 207/355 (58.31%), Postives = 232/355 (65.35%), Query Frame = 0 Query: 1 MENEEQNNESAKTQPPQSKKKTIITIPSYQEVINST---NPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPANP-------PTTSQNPTLSQGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDV---------------------------EECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFG-----------------------VKCLYDTFHEPFKRVVSHHPPIPETPSLKDVEPSSMNEVTKVKKDTEERKQNVGRKN 295
ME +E+N KTQ +I IPSY+EVI S+ + P +LFTPSQSFSQAF+FIKSSEFY PPPPPPA PT N S + +A+A+SS S QSRNAILVS RQKGNPLLKHIRNVRWAFADV CDYLLGQN+CALYLSLRYHLLHPDYLYY IRELQKNF LR VLCHVDV EECG YLETIKVYENKPADLIQGQ+DTDYLS+L HALT+V VNKTDVVTL STFG VK L+DTFHEPFKR+VS +P IPETP KD EPSS +EV + K TE+ + ++N
Sbjct: 1 MEKDEENQNKKKTQ-------IVIGIPSYKEVIESSQTKSTPPSLFTPSQSFSQAFNFIKSSEFYTPPPPPPAPSSPLSTPRPTGGANVPSSSSAASTSASPAAAAASSTSSQSRNAILVSHRQKGNPLLKHIRNVRWAFADVACDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLNHALTTVRRVNKTDVVTLGSTFGSLSSIMDASLEDLARCPGIGERKVKRLHDTFHEPFKRIVSSNPSIPETPVCKDAEPSSASEVIEADKYTEDTSKRRKKEN 348
BLAST of CMJ_chr3_013200.1 vs. ExPASy Swiss-Prot
Match: ERCC1_ARATH (DNA excision repair protein ERCC-1 OS=Arabidopsis thaliana OX=3702 GN=ERCC1 PE=2 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.971e-97 Identity = 184/365 (50.41%), Postives = 224/365 (61.37%), Query Frame = 0 Query: 1 MENEEQNNESAKTQPPQSKKK----TIITIPSYQEVINST---NPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPANPPTTS-----QNPTLSQGGEQNVGTASAS------ASSSQSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDVE---------------------------ECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFG-----------------------VKCLYDTFHEPFKRVVSHH-----PPIPETPSLKDV---EPSSMNEVTKVKKDTEERKQ 289
M NE+ + E +++ Q +K +I +PSYQEV+ S+ + P +LF PSQSFSQAF+F+KSS+ Y+PPPP A ++ Q P S Q G +S+S + S + Q+RNAILVS RQKGNPLLKHIRNV+W F+D++ DY+LGQNSCALYLSLRYHLLHPDYLY+ IRELQKNF L VLCHVDVE EC YLETIKVYENKPADLIQGQ+DTDYLS+L H+LTS+ VNK+DVVTL STFG VK LYDTFHEPFKR S + PPIPE P KDV EP +E +D+ +RK+
Sbjct: 1 MANEDDDGEKSRSLHQQIARKPKTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKSSDVYSPPPPSSAAASSSQPSGASQVPHSSSQTHQTDGASSSSTPVATGSVPSNTTQNRNAILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKPADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGERKVKRLYDTFHEPFKRATSSYPSVVEPPIPEAPVEKDVNSEEPVEEDE--DFVEDSRKRKK 363
BLAST of CMJ_chr3_013200.1 vs. ExPASy Swiss-Prot
Match: ERCC1_HUMAN (DNA excision repair protein ERCC-1 OS=Homo sapiens OX=9606 GN=ERCC1 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.827e-47 Identity = 87/198 (43.94%), Postives = 114/198 (57.58%), Query Frame = 0 Query: 106 NAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDV---------------------------EECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFG-----------------------VKCLYDTFHEPFKRV 253
N+I+VS RQ+GNP+LK +RNV W F DV+ DY+LGQ++CAL+LSLRYH LHPDY++ ++ L KNF LR +L VDV EE G YLET K YE KPADL+ +L+ D++S++T LT+V SVNKTD TL +TFG + L+D HEPF +V
Sbjct: 99 NSIIVSPRQRGNPVLKFVRNVPWEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLTTVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKV 296
BLAST of CMJ_chr3_013200.1 vs. ExPASy Swiss-Prot
Match: ERCC1_BOVIN (DNA excision repair protein ERCC-1 OS=Bos taurus OX=9913 GN=ERCC1 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.422e-46 Identity = 85/198 (42.93%), Postives = 115/198 (58.08%), Query Frame = 0 Query: 106 NAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDV---------------------------EECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFG-----------------------VKCLYDTFHEPFKRV 253
N+I+VS RQ+GNP+L+ +RNV W F DV+ DY+LGQ++CAL+LSLRYH LHPDY++ ++ L K++ LR +L VDV EE G YLET K YE KPADL+ +L+ D++S++T LT+V SVNKTD TL +TFG + L+D FHEPF +V
Sbjct: 95 NSIIVSPRQRGNPVLRFVRNVPWEFGDVLPDYVLGQSTCALFLSLRYHNLHPDYIHQRLQSLGKSYALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLTTVKSVNKTDSQTLLTTFGSLEQLIAASREDLSLCPGLGPQKARRLFDVFHEPFLKV 292
BLAST of CMJ_chr3_013200.1 vs. ExPASy Swiss-Prot
Match: ERCC1_MOUSE (DNA excision repair protein ERCC-1 OS=Mus musculus OX=10090 GN=Ercc1 PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 2.960e-46 Identity = 106/310 (34.19%), Postives = 153/310 (49.35%), Query Frame = 0 Query: 7 NNESAKTQP--PQSKKKTIITI-----------PSYQEVINSTNPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPANPPTTSQNPTLSQGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDV---------------------------EECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFG-----------------------VKCLYDTFHEPFKRV 253
+E ++ QP P +++K +I + P ++ N T P + Q++++ PP A PT S+ P + Q + T + S N+I+VS RQ+GNP+LK +RNV W F +V+ DY+LGQ++CAL+LSLRYH LHPDY++ ++ L KNF LR +L VDV EE G YLET K YE KPADL+ +L+ ++LS+ T LT+V SVNKTD TL +TFG + L++ HEPF +V
Sbjct: 5 KDEESRPQPSGPPTRRKFVIPLEEEEVPCAGVKPLFRSSRNPTIPATSAHVAPQTYAE-------YAITQPPGGAGATVPTGSE-PAAGENPSQTLKTGAKS----------NSIIVSPRQRGNPVLKFVRNVPWEFGEVIPDYVLGQSTCALFLSLRYHNLHPDYIHERLQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLVLAWSAEEAGRYLETYKAYEQKPADLLMEKLEQNFLSRATECLTTVKSVNKTDSQTLLATFGSLEQLFTASREDLALCPGLGPQKARRLFEVLHEPFLKV 296
BLAST of CMJ_chr3_013200.1 vs. ExPASy Swiss-Prot
Match: SWI10_SCHPO (Mating-type switching protein swi10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=swi10 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.050e-35 Identity = 73/180 (40.56%), Postives = 100/180 (55.56%), Query Frame = 0 Query: 86 EQNVGTASASASSSQSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDV---------------------------EECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFG 238
E+ G A S + ++ILV+ RQKGNPLL H+RNV W + D+V D+++G C+L+LSL+YH LHP+Y+Y I +L K++ LR +L VDV EE YLET K YEN LI + TDYLSQ+ LTS+ +NK+D ++L S FG
Sbjct: 21 EKKAGFAQQPTPQKVSRVTAHSILVNPRQKGNPLLPHVRNVPWEYTDIVPDFVMGTGICSLFLSLKYHHLHPEYIYSRISKLGKSYNLRILLILVDVENHQASIQELVKTSIVNQYTLILAWSSEEAARYLETYKAYENMSPALIMEKPSTDYLSQVQSFLTSIRGINKSDSLSLLSKFG 200
BLAST of CMJ_chr3_013200.1 vs. Araport11
Match: AT3G05210.1 (| nucleotide repair protein | Chr3:1479591-1481823 FORWARD LENGTH=410 | 201606) HSP 1 Score: 295.049 bits (754), Expect = 4.062e-98 Identity = 184/365 (50.41%), Postives = 224/365 (61.37%), Query Frame = 0 Query: 1 MENEEQNNESAKTQPPQSKKK----TIITIPSYQEVINST---NPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPANPPTTS-----QNPTLSQGGEQNVGTASAS------ASSSQSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDVE---------------------------ECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFG-----------------------VKCLYDTFHEPFKRVVSHH-----PPIPETPSLKDV---EPSSMNEVTKVKKDTEERKQ 289
M NE+ + E +++ Q +K +I +PSYQEV+ S+ + P +LF PSQSFSQAF+F+KSS+ Y+PPPP A ++ Q P S Q G +S+S + S + Q+RNAILVS RQKGNPLLKHIRNV+W F+D++ DY+LGQNSCALYLSLRYHLLHPDYLY+ IRELQKNF L VLCHVDVE EC YLETIKVYENKPADLIQGQ+DTDYLS+L H+LTS+ VNK+DVVTL STFG VK LYDTFHEPFKR S + PPIPE P KDV EP +E +D+ +RK+
Sbjct: 1 MANEDDDGEKSRSLHQQIARKPKTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKSSDVYSPPPPSSAAASSSQPSGASQVPHSSSQTHQTDGASSSSTPVATGSVPSNTTQNRNAILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKPADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGERKVKRLYDTFHEPFKRATSSYPSVVEPPIPEAPVEKDVNSEEPVEEDE--DFVEDSRKRKK 363
BLAST of CMJ_chr3_013200.1 vs. Araport11
Match: AT3G05210.2 (| nucleotide repair protein | Chr3:1479591-1481302 FORWARD LENGTH=294 | 201606) HSP 1 Score: 266.159 bits (679), Expect = 1.945e-88 Identity = 156/285 (54.74%), Postives = 191/285 (67.02%), Query Frame = 0 Query: 1 MENEEQNNESAKTQPPQSKKK----TIITIPSYQEVINST---NPPQNLFTPSQSFSQAFSFIKSSEFYNPPPPPPANPPTTS-----QNPTLSQGGEQNVGTASAS------ASSSQSIQSRNAILVSQRQKGNPLLKHIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYCIRELQKNFMLRFVLCHVDVE---------------------------ECGCYLETIKVYENKPADLIQGQLDTDYLSQLTHALTSVWSVNKTDVVTLESTFGVK 240
M NE+ + E +++ Q +K +I +PSYQEV+ S+ + P +LF PSQSFSQAF+F+KSS+ Y+PPPP A ++ Q P S Q G +S+S + S + Q+RNAILVS RQKGNPLLKHIRNV+W F+D++ DY+LGQNSCALYLSLRYHLLHPDYLY+ IRELQKNF L VLCHVDVE EC YLETIKVYENKPADLIQGQ+DTDYLS+L H+LTS+ VNK+DVVTL STFGV+
Sbjct: 1 MANEDDDGEKSRSLHQQIARKPKTQIVIGVPSYQEVLESSQTKSTPPSLFKPSQSFSQAFAFVKSSDVYSPPPPSSAAASSSQPSGASQVPHSSSQTHQTDGASSSSTPVATGSVPSNTTQNRNAILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKPADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGVE 285 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_013200.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_013200.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 5 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_013200.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_013200.1_cmj_v1 ID=CMJ_chr3_013200.1_cmj_v1; Name=CMJ_chr3_013200.1; organism=Citrus maxima; type=mRNA; length=894bpback to top protein sequence of CMJ_chr3_013200.1_cmj_v1 >CMJ_chr3_013200.1_cmj_v1 ID=CMJ_chr3_013200.1_cmj_v1; Name=CMJ_chr3_013200.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=298bpback to top mRNA from alignment at chr3:31899919..31976953+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=77035bp; location=Sequence derived from: chr3:31899919..31976953+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:31899919..31976953+ >CMJ_chr3_013200.1_cmj_v1 ID=CMJ_chr3_013200.1_cmj_v1; Name=CMJ_chr3_013200.1; organism=Citrus maxima; type=CDS; length=894bp; location=Sequence derived from: chr3:31899919..31976953+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|