CMJ_chr3_013280.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of CMJ_chr3_013280.1 vs. ExPASy TrEMBL
Match: V4V3Q7|V4V3Q7_CITCL (SHSP domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10003281mg PE=3 SV=1) HSP 1 Score: 531.561 bits (1368), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0 Query: 31 FAFTVSATAMDSPSQYIVTPESSMLESNDEPSGSHGESTPTLASPTSQAKRHIDDIEESTDYVVHDIEESEDYVVHDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKHL 291
FAFTVSATAMDSPSQYIVTPESSMLESNDEPSGSHGESTPTLASPTSQAKRHIDDIEESTDYVVHDIEESEDYVVHDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKHL
Sbjct: 1 FAFTVSATAMDSPSQYIVTPESSMLESNDEPSGSHGESTPTLASPTSQAKRHIDDIEESTDYVVHDIEESEDYVVHDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKHL 261
BLAST of CMJ_chr3_013280.1 vs. ExPASy TrEMBL
Match: A0A067F059|A0A067F059_CITSI (SHSP domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g025484mg PE=3 SV=1) HSP 1 Score: 511.916 bits (1317), Expect = 0.000e+0 Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0 Query: 40 MDSPSQYIVTPESSMLESNDEPSGSHGESTPTLASPTSQAKRHIDDIEESTDYVVHDIEESEDYVVHDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKHL 291
MDSPSQYIVTPESSMLESNDEPSGSHGESTPTLASPTSQAKRHIDDIEESTDYVVHDIEESEDYVVHDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVG HVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKHL
Sbjct: 1 MDSPSQYIVTPESSMLESNDEPSGSHGESTPTLASPTSQAKRHIDDIEESTDYVVHDIEESEDYVVHDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGPHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKHL 252
BLAST of CMJ_chr3_013280.1 vs. ExPASy TrEMBL
Match: A0A2H5P9W5|A0A2H5P9W5_CITUN (SHSP domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_117070 PE=3 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 2.782e-87 Identity = 141/268 (52.61%), Postives = 179/268 (66.79%), Query Frame = 0 Query: 40 MDSPSQYIVTPESSMLESND-----------------EPSGSHGESTPTLASPTSQAKRHIDDIEESTDYVVHDIEESEDYVVHDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKH 290
MDSPS+++V P++ MLES++ + + S+GES L S TSQ KRH+DD E S ++ +H + ++ LPP +SIPS S P + +++ PA +F+PSRPTK WA++ AATK+GF++TG A G+VG VG D+GE ED YMFR+ALPGVKRDD +FSC VDP GK+LIKGVTTTGEKSV K+SQVFEMQTQNL P G FSI+ LPGPV+P+QFS NFG DGILEG V KQKH
Sbjct: 1 MDSPSKFMVAPDTPMLESSEAARFLILEEGSLHDVPVKEAESNGESLLVLPSQTSQRKRHLDDAEASEEHNLHKVTP----------------LNSRLPPLDSIPSESAPVSNYTRYLEGHEPALLFLPSRPTKQVWAEITAATKTGFSVTGSAATGKVGPVVGLVDIGECEDSYMFRVALPGVKRDDGDFSCEVDPMGKVLIKGVTTTGEKSVYKYSQVFEMQTQNLCPPGHFSISFQLPGPVNPEQFSGNFGIDGILEGIVMKQKH 252
BLAST of CMJ_chr3_013280.1 vs. ExPASy TrEMBL
Match: V4T522|V4T522_CITCL (SHSP domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10002241mg PE=3 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 4.075e-87 Identity = 142/268 (52.99%), Postives = 178/268 (66.42%), Query Frame = 0 Query: 40 MDSPSQYIVTPESSMLESND-----------------EPSGSHGESTPTLASPTSQAKRHIDDIEESTDYVVHDIEESEDYVVHDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEFIDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKH 290
MDSPS+++V P++ MLES + + + S+GES L S TSQ KRH+DD E S ++ +H + S + LPP +SIPS S P + +++ PA +F+PSRPTK WA++ AATK+GF++TG A G+VG VG D+GE ED YMFR+ALPGVKRDD +FSC VDP GK+LIKGVTTTGEKSV K+SQVFEMQTQNL P G FSI+ LPGPV+P+QFS NFG DGILEG V KQKH
Sbjct: 1 MDSPSKFMVAPDTPMLESGEAAGFLILEEGSLHDVPVKEAESNGESPLVLPSQTSQRKRHLDDAEASEEHNLHKVMPS----------------NSRLPPLDSIPSESAPVSNYTRYLEGHEPALLFLPSRPTKQVWAEITAATKTGFSVTGSAATGKVGPVVGLVDIGECEDSYMFRVALPGVKRDDGDFSCEVDPMGKVLIKGVTTTGEKSVYKYSQVFEMQTQNLCPPGHFSISFQLPGPVNPEQFSGNFGIDGILEGIVMKQKH 252
BLAST of CMJ_chr3_013280.1 vs. ExPASy TrEMBL
Match: A0A5C7ICK7|A0A5C7ICK7_9ROSI (SHSP domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_008355 PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.360e-65 Identity = 110/182 (60.44%), Postives = 133/182 (73.08%), Query Frame = 0 Query: 112 EDYVVHDVLP---PSESIPSVSEPRVHGFEFIDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKH 290
E+ V +DV P PS + R H ++ PA IF+PS+P+K EWA + +A KSGFALTG A +G VG VG DVGE ED Y+FR+ALPGVKRDD EFSC VDPTGK+ I+G+TTTGEKSV++FSQVFEM+TQNL P GPFS+T LPG V ++FS NFG DGILEG VKK+KH
Sbjct: 167 ENTVPYDVPPMMHPSLGPGPTQDDRKH----LERDSPAIIFLPSQPSKQEWADITSAVKSGFALTGSAAMGHVGPIVGLMDVGECEDSYLFRVALPGVKRDDSEFSCWVDPTGKVSIRGITTTGEKSVHRFSQVFEMKTQNLCPPGPFSMTFQLPGRVVVEEFSGNFGMDGILEGIVKKEKH 344
BLAST of CMJ_chr3_013280.1 vs. ExPASy TrEMBL
Match: A0A2N9IQM5|A0A2N9IQM5_FAGSY (SHSP domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55688 PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 3.668e-65 Identity = 117/236 (49.58%), Postives = 146/236 (61.86%), Query Frame = 0 Query: 64 SHGESTPTLASPTSQAKRHIDDIEESTDYVVHDIEESEDYVVHDIEESEDYVVHDVLPPSESIPSVSEPRVHGF----------EFIDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQK 289
S+ ES P +S SQ R IDDI + D H V+ P S+P +P ++ + ++ GPA IF+PS PTK EW + AATKSGFALTG A +GQVG +G D+GE ED Y+FR++LPGVKRD+ EFSC V+ GK+LI+GVTTTGEK+V ++SQVF+MQTQNL P G FSI+ LPGPVDPQQF NFG DGILEG V K +
Sbjct: 204 SNRESPPPRSSRGSQKTRRIDDILKPEDPRQH---------------------FHVVAPVSSVPYSGKPMMYSYMASLPTEDDSNPMEEVGPAMIFLPSHPTKKEWTNIVAATKSGFALTGSAAMGQVGPVIGLMDIGECEDSYLFRVSLPGVKRDEREFSCEVEIDGKVLIRGVTTTGEKTVYRYSQVFDMQTQNLCPPGHFSISFQLPGPVDPQQFCGNFGTDGILEGIVMKGR 418
BLAST of CMJ_chr3_013280.1 vs. ExPASy TrEMBL
Match: A0A7N2L4K5|A0A7N2L4K5_QUELO (SHSP domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 5.737e-65 Identity = 119/238 (50.00%), Postives = 147/238 (61.76%), Query Frame = 0 Query: 67 ESTPTLASPTS----QAKRHIDDIEESTDYVVHDIEESEDYVVHDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEF----------IDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKH 290
ES L SP+S Q R IDDI D+ H H V P S S+P +P ++ + ++ GPA IF+PS PTK EW + AATKSGFALTG A +GQVG +G D+GE +D Y+FR++LPGVKRD+ EFSC V+ GK+LI+GVTTTGEK+V ++SQVFEMQTQNL P G FSI+ LPGPVDPQQF NFG DG+LEG V K +H
Sbjct: 204 ESNRELPSPSSSRGSQKTRRIDDILNPQDHQQH--------------------FHFVAPIS-SVPYSGKPMMYSYMASLPTKDDSNPMEKVGPAMIFLPSHPTKKEWTNIVAATKSGFALTGSAAMGQVGPVIGLMDIGECDDSYLFRVSLPGVKRDEREFSCEVEIDGKVLIQGVTTTGEKTVYRYSQVFEMQTQNLCPPGHFSISFQLPGPVDPQQFCGNFGTDGVLEGIVMKGRH 420
BLAST of CMJ_chr3_013280.1 vs. ExPASy TrEMBL
Match: A0A7N2L4H2|A0A7N2L4H2_QUELO (SHSP domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 5.861e-65 Identity = 119/238 (50.00%), Postives = 147/238 (61.76%), Query Frame = 0 Query: 67 ESTPTLASPTS----QAKRHIDDIEESTDYVVHDIEESEDYVVHDIEESEDYVVHDVLPPSESIPSVSEPRVHGFEF----------IDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKH 290
ES L SP+S Q R IDDI D+ H H V P S S+P +P ++ + ++ GPA IF+PS PTK EW + AATKSGFALTG A +GQVG +G D+GE +D Y+FR++LPGVKRD+ EFSC V+ GK+LI+GVTTTGEK+V ++SQVFEMQTQNL P G FSI+ LPGPVDPQQF NFG DG+LEG V K +H
Sbjct: 204 ESNRELPSPSSSRGSQKTRRIDDILNPQDHQQH--------------------FHFVAPIS-SVPYSGKPMMYSYMASLPTKDDSNPMEKVGPAMIFLPSHPTKKEWTNIVAATKSGFALTGSAAMGQVGPVIGLMDIGECDDSYLFRVSLPGVKRDEREFSCEVEIDGKVLIQGVTTTGEKTVYRYSQVFEMQTQNLCPPGHFSISFQLPGPVDPQQFCGNFGTDGVLEGIVMKGRH 420
BLAST of CMJ_chr3_013280.1 vs. ExPASy TrEMBL
Match: A0A2Z6PDF3|A0A2Z6PDF3_TRISU (SHSP domain-containing protein (Fragment) OS=Trifolium subterraneum OX=3900 GN=TSUD_34330 PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.003e-64 Identity = 109/214 (50.93%), Postives = 142/214 (66.36%), Query Frame = 0 Query: 86 IEESTDYVVHDIEESEDYVVHDIEESEDYV-VHDVLPPSES--IPSVSEPRVHGFEF-------IDASGPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQK 289
+E + + +I+ S + + ES+D+ + LP S +P S P G + GPA +F+PSRPTK EW+ + AATK+GF LTG A +G+VG +G D+GE ED Y+FR++LPGVKRD+ EFSC VD GK+LI GVTTTGEK+V+++SQVF+MQTQNL P G F++T LPGPVDP QFS NFG DGILEG V K K
Sbjct: 117 VERNRIMSLPEIKCSRNTSSRKVNESDDFSEIKHQLPRSACAVMPIRSVPFNEGMALESEGDDSVKVCGPAVLFLPSRPTKKEWSDVVAATKNGFGLTGSAAMGRVGPIIGLVDIGECEDSYLFRMSLPGVKRDEKEFSCEVDTNGKVLINGVTTTGEKTVSRYSQVFQMQTQNLCPPGNFAVTFQLPGPVDPHQFSGNFGTDGILEGMVMKGK 330
BLAST of CMJ_chr3_013280.1 vs. ExPASy TrEMBL
Match: A0A6A5MZS0|A0A6A5MZS0_LUPAL (Putative HSP20-like chaperone OS=Lupinus albus OX=3870 GN=Lal_00048991 PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 7.499e-64 Identity = 98/146 (67.12%), Postives = 119/146 (81.51%), Query Frame = 0 Query: 145 PASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKH 290
PA +F+PSRPTK EW+ + AATK+GFALTG A +GQVG ++G D+GE ED ++FR++LPGVKRD+ FSC VD GK+LI+GVTTTGEK++++FSQVFEMQT NL P G FSIT LPGPVDP QFS NFG DGILEG V K+KH
Sbjct: 267 PAMLFLPSRPTKKEWSDIVAATKNGFALTGSAAMGQVGPNIGLMDIGECEDSFLFRVSLPGVKRDEKYFSCEVDTEGKVLIQGVTTTGEKTISRFSQVFEMQTHNLCPPGDFSITFQLPGPVDPHQFSGNFGTDGILEGMVMKRKH 412
BLAST of CMJ_chr3_013280.1 vs. ExPASy Swiss-Prot
Match: IDM2L_ARATH (Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana OX=3702 GN=ACD22.3 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.732e-53 Identity = 81/144 (56.25%), Postives = 108/144 (75.00%), Query Frame = 0 Query: 144 GPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKK 287
GPA IF+PS + +E++ L + TK+G ALTG A +G++G +G D+ ESED Y FR+ALPGV RD+ EFSC ++P GKI+IKG TTTGE++V K +Q+F+M TQNL P G F+I LPGPV ++F+ NFG DG+LEG VKK
Sbjct: 59 GPAMIFLPSD-SSSEFSNLISQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKEFSCEIEPDGKIMIKGATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEFNGNFGSDGVLEGVVKK 201
BLAST of CMJ_chr3_013280.1 vs. ExPASy Swiss-Prot
Match: IDM2_ARATH (Increased DNA methylation 2 OS=Arabidopsis thaliana OX=3702 GN=IDM2 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 6.308e-39 Identity = 63/107 (58.88%), Postives = 80/107 (74.77%), Query Frame = 0 Query: 182 GTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQ 288
G VG D+GE +D Y+FR++LPGVKRD+ FSC V+ GK+L++GVTTTG K V ++S VFEMQT++L P G FS++ LPGPV P +FS NFG DGILEG V K
Sbjct: 237 GLMVGLMDIGECDDAYLFRVSLPGVKRDERYFSCEVEDNGKVLVRGVTTTGGKRVKRYSHVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTDGILEGVVMKN 343
BLAST of CMJ_chr3_013280.1 vs. ExPASy Swiss-Prot
Match: IDM3_ARATH (Increased DNA methylation 3 OS=Arabidopsis thaliana OX=3702 GN=IDM3 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 7.267e-33 Identity = 56/118 (47.46%), Postives = 82/118 (69.49%), Query Frame = 0 Query: 173 TGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKH 290
TG A+ +G+ VG D+G ++ Y F++ALPGV++D EFSC ++ GK++++G TT GEK++ + S+VFEM + L P GPF + NLPGPVDP+ FS NF DGI EG + + K+
Sbjct: 345 TGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGEFSCEIESDGKVILEGSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFEGVIIRHKN 462
BLAST of CMJ_chr3_013280.1 vs. Araport11
Match: AT1G54850.1 (| HSP20-like chaperones superfamily protein | Chr1:20454440-20455994 FORWARD LENGTH=206 | 201606) HSP 1 Score: 175.637 bits (444), Expect = 2.795e-54 Identity = 81/144 (56.25%), Postives = 108/144 (75.00%), Query Frame = 0 Query: 144 GPASIFIPSRPTKTEWAKLRAATKSGFALTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKK 287
GPA IF+PS + +E++ L + TK+G ALTG A +G++G +G D+ ESED Y FR+ALPGV RD+ EFSC ++P GKI+IKG TTTGE++V K +Q+F+M TQNL P G F+I LPGPV ++F+ NFG DG+LEG VKK
Sbjct: 59 GPAMIFLPSD-SSSEFSNLISQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKEFSCEIEPDGKIMIKGATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEFNGNFGSDGVLEGVVKK 201
BLAST of CMJ_chr3_013280.1 vs. Araport11
Match: AT1G54840.1 (| HSP20-like chaperones superfamily protein | Chr1:20452801-20453932 REVERSE LENGTH=349 | 201606) HSP 1 Score: 142.895 bits (359), Expect = 6.454e-40 Identity = 63/107 (58.88%), Postives = 80/107 (74.77%), Query Frame = 0 Query: 182 GTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQ 288
G VG D+GE +D Y+FR++LPGVKRD+ FSC V+ GK+L++GVTTTG K V ++S VFEMQT++L P G FS++ LPGPV P +FS NFG DGILEG V K
Sbjct: 237 GLMVGLMDIGECDDAYLFRVSLPGVKRDERYFSCEVEDNGKVLVRGVTTTGGKRVKRYSHVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTDGILEGVVMKN 343
BLAST of CMJ_chr3_013280.1 vs. Araport11
Match: AT1G20870.2 (| HSP20-like chaperones superfamily protein | Chr1:7259287-7260775 REVERSE LENGTH=463 | 201606) HSP 1 Score: 128.642 bits (322), Expect = 7.435e-34 Identity = 56/118 (47.46%), Postives = 82/118 (69.49%), Query Frame = 0 Query: 173 TGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKH 290
TG A+ +G+ VG D+G ++ Y F++ALPGV++D EFSC ++ GK++++G TT GEK++ + S+VFEM + L P GPF + NLPGPVDP+ FS NF DGI EG + + K+
Sbjct: 345 TGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGEFSCEIESDGKVILEGSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFEGVIIRHKN 462
BLAST of CMJ_chr3_013280.1 vs. Araport11
Match: AT1G20870.1 (| HSP20-like chaperones superfamily protein | Chr1:7259287-7260775 REVERSE LENGTH=463 | 201606) HSP 1 Score: 128.642 bits (322), Expect = 7.435e-34 Identity = 56/118 (47.46%), Postives = 82/118 (69.49%), Query Frame = 0 Query: 173 TGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSVNKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKKQKH 290
TG A+ +G+ VG D+G ++ Y F++ALPGV++D EFSC ++ GK++++G TT GEK++ + S+VFEM + L P GPF + NLPGPVDP+ FS NF DGI EG + + K+
Sbjct: 345 TGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGEFSCEIESDGKVILEGSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFEGVIIRHKN 462
BLAST of CMJ_chr3_013280.1 vs. Araport11
Match: AT1G76440.3 (| HSP20-like chaperones superfamily protein | Chr1:28682371-28682999 REVERSE LENGTH=143 | 201606) HSP 1 Score: 105.531 bits (262), Expect = 7.682e-28 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 0 Query: 172 LTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSV-NKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKK 287
TG A LG VG +G D+G SE Y+FR++LPG++++ D+ C + G++ I+GV E ++ + ++ MQ Q L P GPFSIT NLPG VDP+ FS NF DGI E V K
Sbjct: 21 CTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEIQREGRVCIQGVIP--EIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVVK 135
BLAST of CMJ_chr3_013280.1 vs. Araport11
Match: AT1G76440.2 (| HSP20-like chaperones superfamily protein | Chr1:28682371-28682999 REVERSE LENGTH=143 | 201606) HSP 1 Score: 105.531 bits (262), Expect = 7.682e-28 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 0 Query: 172 LTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSV-NKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKK 287
TG A LG VG +G D+G SE Y+FR++LPG++++ D+ C + G++ I+GV E ++ + ++ MQ Q L P GPFSIT NLPG VDP+ FS NF DGI E V K
Sbjct: 21 CTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEIQREGRVCIQGVIP--EIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVVK 135
BLAST of CMJ_chr3_013280.1 vs. Araport11
Match: AT1G76440.1 (| HSP20-like chaperones superfamily protein | Chr1:28682371-28682999 REVERSE LENGTH=143 | 201606) HSP 1 Score: 105.531 bits (262), Expect = 7.682e-28 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 0 Query: 172 LTGVATLGQVGTHVGKADVGESEDDYMFRIALPGVKRDDDEFSCTVDPTGKILIKGVTTTGEKSV-NKFSQVFEMQTQNLTPAGPFSITINLPGPVDPQQFSANFGFDGILEGTVKK 287
TG A LG VG +G D+G SE Y+FR++LPG++++ D+ C + G++ I+GV E ++ + ++ MQ Q L P GPFSIT NLPG VDP+ FS NF DGI E V K
Sbjct: 21 CTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEIQREGRVCIQGVIP--EIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVVK 135 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_013280.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_013280.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 3 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_013280.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 7 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_013280.1_cmj_v1 ID=CMJ_chr3_013280.1_cmj_v1; Name=CMJ_chr3_013280.1; organism=Citrus maxima; type=mRNA; length=876bpback to top protein sequence of CMJ_chr3_013280.1_cmj_v1 >CMJ_chr3_013280.1_cmj_v1 ID=CMJ_chr3_013280.1_cmj_v1; Name=CMJ_chr3_013280.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=292bpback to top mRNA from alignment at chr3:32054345..32055577- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1233bp; location=Sequence derived from: chr3:32054345..32055577- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:32054345..32055577- >CMJ_chr3_013280.1_cmj_v1 ID=CMJ_chr3_013280.1_cmj_v1; Name=CMJ_chr3_013280.1; organism=Citrus maxima; type=CDS; length=876bp; location=Sequence derived from: chr3:32054345..32055577- (Citrus maximaback to top |