CMJ_chr3_014380.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_014380.1 vs. ExPASy TrEMBL
Match: A0A067DDV0|A0A067DDV0_CITSI (PMEI domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g044793mg PE=4 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 6.263e-103 Identity = 142/156 (91.03%), Postives = 149/156 (95.51%), Query Frame = 0 Query: 1 MASQVRFHVPLFVIVYSIFVHLMLVTTAQAKNENNDGVQLIRKSCNVTEFAKECISVFESDPRSRAAANLTSLVGVGMNISYEKIKEAKSYFLKAQKNATDHWTKEYIDDCLVNYDAAIWQMDNHGFPGFDKRNYEDAISAVNVCNYAAGFCAENG 156 MA Q+RFH+PLFV V SIF+HLMLVT AQAK+EN+DGV LI KSCNVTEFAKECISVFESDPRSRAAANLTSLVGVGMNISYEKIK AKSYFLKAQK+ATDHWTKEYIDDCLVNYDAAIWQMD+HGFPGFDKRNYEDAISAVNVCNYAAGFCAENG Sbjct: 1 MAGQIRFHLPLFVFVCSIFIHLMLVTAAQAKSENSDGVPLIGKSCNVTEFAKECISVFESDPRSRAAANLTSLVGVGMNISYEKIKVAKSYFLKAQKSATDHWTKEYIDDCLVNYDAAIWQMDHHGFPGFDKRNYEDAISAVNVCNYAAGFCAENG 156
BLAST of CMJ_chr3_014380.1 vs. ExPASy TrEMBL
Match: A0A5C7GR67|A0A5C7GR67_9ROSI (PMEI domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026595 PE=4 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 7.482e-33 Identity = 71/184 (38.59%), Postives = 101/184 (54.89%), Query Frame = 0 Query: 1 MASQVRFHVP---LFVIVYSIFVHLMLVTTAQAKNENNDGVQLIRKSCNVTEFAKECISVFESDPRSRAAANLTSLVGVGMNISYEKIKEAKSYFLKAQKNATDHWTKEYIDDCLVNYDAAIWQMDNHGFPGFDKRNYEDAISAVNVCNYAAGFCAENGVQLYVQENKKLFNFTGAVYEILSTL 181 M F++P L V++ +FV VT NND V LIR+SC T F CISV E+D RSR A +L SL + M+I YE+ KS F+KA++N TD +K + C+ +++ I M N G P F+K NY DA V+ C A C + G++L+ +E F+F+G V L+ L Sbjct: 1 MVKPTCFYLPFLMLSVVLRVLFVDHNTVTATS----NNDEVPLIRQSCKATSFPNTCISVLEADSRSRNATDLKSLTRISMDIVYEEAIVLKSLFIKAEENVTDPVSKRSVKQCIDSFEDCINNMKNVGIPDFEKGNYRDANIDVDFCAVCANDCRDTGIKLFNKEIVTFFDFSGDVLAFLNML 180
BLAST of CMJ_chr3_014380.1 vs. ExPASy TrEMBL
Match: A0A5C7GRQ6|A0A5C7GRQ6_9ROSI (PMEI domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026597 PE=4 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 4.226e-32 Identity = 68/184 (36.96%), Postives = 102/184 (55.43%), Query Frame = 0 Query: 1 MASQVRFHVPLF---VIVYSIFVHLMLVTTAQAKNENNDGVQLIRKSCNVTEFAKECISVFESDPRSRAAANLTSLVGVGMNISYEKIKEAKSYFLKAQKNATDHWTKEYIDDCLVNYDAAIWQMDNHGFPGFDKRNYEDAISAVNVCNYAAGFCAENGVQLYVQENKKLFNFTGAVYEILSTL 181 M + ++PL +++Y +F+ TT ND V LIR+SC T CISV E+D RSR+A +L +L + M+I YE+ K F+KA++N TD K I C+ +++ I M N G P F+K NY +A V+VC AG C + G++L+ +E LF+F+G V L+ L Sbjct: 1 MVNPTSCYLPLLMLSIVLYVLFIDHNTATTTSY----NDEVPLIRQSCKATSVPDTCISVLEADSRSRSATDLKTLTRISMDIVYEEAIGLKLLFIKAEENVTDPVLKRNIKQCIDSFEDCINNMKNVGIPDFEKGNYREANIDVDVCVVCAGDCMDTGIKLFNREIVTLFDFSGDVLAFLNML 180
BLAST of CMJ_chr3_014380.1 vs. ExPASy TrEMBL
Match: A0A5C7I816|A0A5C7I816_9ROSI (PMEI domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_006562 PE=4 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.670e-30 Identity = 67/182 (36.81%), Postives = 101/182 (55.49%), Query Frame = 0 Query: 1 MASQVRFHVPLFVIVYSIFVHLMLVTTAQAK-NENNDGVQLIRKSCNVTEFAKECISVFESDPRSRAAANLTSLVGVGMNISYEKIKEAKSYFLKAQKNATDHWTKEYIDDCLVNYDAAIWQMDNHGFPGFDKRNYEDAISAVNVCNYAAGFCAENGVQLYVQENKKLFNFTGAVYEILSTL 181 M + F++P +++ I V L+ V + A NND V IRKSCN TE+ CI V E DPRSR +L +L + M+I YE+ E KS F+KA +NATD K I C+ +D + + +G P F+K +Y +A S + + C + G +L+ +E + FNF+ V ++LS L Sbjct: 1 MLNPTCFYLPF--LMFFIVVPLLSVNQSSATATVNNDAVPFIRKSCNGTEYPDTCIYVLEGDPRSRTTTDLKNLTRISMDIVYEEAIELKSLFIKAGENATDPVLKMNIRSCIGEFDIGSYHVKTYGIPYFEKGDYANANSQIGYIVGGSSNCNDTGTKLFNKEVETSFNFSCNVLDLLSML 180
BLAST of CMJ_chr3_014380.1 vs. ExPASy TrEMBL
Match: A0A7N2LM05|A0A7N2LM05_QUELO (PMEI domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.756e-17 Identity = 54/181 (29.83%), Postives = 87/181 (48.07%), Query Frame = 0 Query: 1 MASQVRFHVPLFVIVYSIFVHLMLVTTAQAKNENNDGVQLIRKSCNVTEFAKECISVFESDPRSRAAANLTSLVGVGMNISYEKIKEAKSYFLKAQKNATDHWTKEYIDDCLVNYDAAIWQMDNHGFPGFDKRNYEDAISAVNVCNYAAGFCAENGVQLYVQENKKLFNFTGAVYEILSTL 181 MA +V + L VI I + +L + AK N G LI K+C TEF C SV ESDPRS ++ANL L G+G+ ++ K E K +A D+ C+ ++ +++++ G FD + ++ A V++ N +C+ G+ + + L FT + IL L Sbjct: 1 MAMEVDVFLDLLVI--PIILSTLLSSHHYAKASNEIGKPLIAKTCTPTEFPDVCTSVLESDPRS-SSANLAGLSGIGLEVTATKGNETAPVAYKLMNSAKDYAEWSIRSTCIQAFNINVYRVNGEGLKYFDAKKFDKAYEIVDIVNGELQYCSTLGIAELTESSTLLAKFTTDLKTILHQL 178
BLAST of CMJ_chr3_014380.1 vs. ExPASy TrEMBL
Match: A0A6J1AQ40|A0A6J1AQ40_9ROSI (pectinesterase inhibitor 28-like isoform X1 OS=Herrania umbratica OX=108875 GN=LOC110419841 PE=4 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.249e-15 Identity = 55/163 (33.74%), Postives = 79/163 (48.47%), Query Frame = 0 Query: 9 VPLFVIVYSIFVHLMLVTTAQAKNENNDGVQLIRKSCNVTEFAKECISVFESDPRSRAAANLTSLVGVGMNISYEKIKEAKSYFLKAQKNATDHWTKEYIDDCLVNYDAAIWQMDNHGFPGFDKRNYEDAISAVNVCNYAAGFCAENGVQLYVQENKKLFNFT 171 VP+ +I + +F LV + G LI K+CN TE+ +ECIS ESD S +ANLT L + + S K+ + SY NATD+ T + C +Y+A+ Q+ G FD+ Y+ +V N AA C G+ + Q N LF T Sbjct: 9 VPIALIPFLVFHQSFLVAGEET------GKALIAKTCNQTEYPEECISALESDASSL-SANLTGLGRIAVEQSASKLNQTLSYVDSLVNNATDYATWASLVICQYSYNASANQIQ-QGLQAFDRLKYDKTYQSVAAVNQAAIECNNQGLGILTQVNTALFRLT 163
BLAST of CMJ_chr3_014380.1 vs. ExPASy TrEMBL
Match: A0A7N2LPB3|A0A7N2LPB3_QUELO (PMEI domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.550e-15 Identity = 54/168 (32.14%), Postives = 82/168 (48.81%), Query Frame = 0 Query: 14 IVYSIFVHLMLVTTAQAKNENNDGVQLIRKSCNVTEFAKECISVFESDPRSRAAANLTSLVGVGMNISYEKIKEAKSYFLKAQKNATDHWTKEYIDDCLVNYDAAIWQMDNHGFPGFDKRNYEDAISAVNVCNYAAGFCAENGVQLYVQENKKLFNFTGAVYEILSTL 181 +V + + L+L + AK +N G LI K+C T+F C SV ESDPRS ++ANLT L +G+ ++ K+ E + K NAT+++ C Y++++ Q+ G FD+R Y A V + N C+ V N L FT + IL L Sbjct: 13 LVIPVVLSLLLSSHYFAKADNEIGKPLIIKTCTQTKFPDVCTSVLESDPRS-SSANLTGLSRIGLELTATKVNETTAEAYKLLINATEYYQWSMRSACFYEYNSSVHQIYK-GLEYFDQRKYHKANEVVFLVNGDIHTCSTRDVPELTGTNTLLSKFTADLQTILHQL 178
BLAST of CMJ_chr3_014380.1 vs. ExPASy TrEMBL
Match: A0A1R3KYS2|A0A1R3KYS2_9ROSI (Pectinesterase inhibitor OS=Corchorus olitorius OX=93759 GN=COLO4_03371 PE=4 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.025e-15 Identity = 45/147 (30.61%), Postives = 73/147 (49.66%), Query Frame = 0 Query: 40 LIRKSCNVTEFAKECISVFESDPRSRAAANLTSLVGVGMNISYEKIKEAKSYFLKAQKNATDHWTKEYIDDCLVNYDAAIWQMDNHGFPGFDKRNYEDAISAVNVCNYAA----GFCAENGVQLYVQENKKLFNFTGAVYEILSTLV 182 LI K+C + C S E+DP ++ A + SL V M ++ KIK+ K+ +D K I C YD A++ ++ P FD++NY +A AV++ Y A C E G+ ++ Q N +++ F+ V +L LV Sbjct: 19 LISKACKESRNPDLCKSTLETDPLTKKAESYNSLCRVAMVVAISKIKKVSFLLAKSLAKESDFRNKSGIMVCTQRYDNALYALNMTAIPAFDEKNYNEAYHAVSLAGYCATACNDVCNEGGLTMFQQHNNEIYAFSSVVQSLLIKLV 165
BLAST of CMJ_chr3_014380.1 vs. ExPASy TrEMBL
Match: A0A061F746|A0A061F746_THECC (PMEI domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_031181 PE=4 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.759e-14 Identity = 54/163 (33.13%), Postives = 79/163 (48.47%), Query Frame = 0 Query: 9 VPLFVIVYSIFVHLMLVTTAQAKNENNDGVQLIRKSCNVTEFAKECISVFESDPRSRAAANLTSLVGVGMNISYEKIKEAKSYFLKAQKNATDHWTKEYIDDCLVNYDAAIWQMDNHGFPGFDKRNYEDAISAVNVCNYAAGFCAENGVQLYVQENKKLFNFT 171 VP+ +I + +F LV +A G LI K+CN TE+ +ECIS ESD S +ANLT L + + S K+ + SY NATD+ T + C +Y+A+ Q+ G FD+ Y+ +V N A C G+ + Q + LF T Sbjct: 9 VPIALIPFLVFHQSFLVAGEEA------GKALIAKTCNQTEYPEECISALESDASSL-SANLTGLGRIAVEQSASKLNQTLSYVDSLVNNATDYATWASLVVCQYSYNASANQIQ-QGLQAFDQLKYDKTYQSVAAVNQAVIECNNQGLGILTQVDTALFRLT 163
BLAST of CMJ_chr3_014380.1 vs. ExPASy TrEMBL
Match: A0A6J1AP75|A0A6J1AP75_9ROSI (pectinesterase inhibitor 28-like isoform X2 OS=Herrania umbratica OX=108875 GN=LOC110419841 PE=4 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.865e-14 Identity = 49/135 (36.30%), Postives = 68/135 (50.37%), Query Frame = 0 Query: 37 GVQLIRKSCNVTEFAKECISVFESDPRSRAAANLTSLVGVGMNISYEKIKEAKSYFLKAQKNATDHWTKEYIDDCLVNYDAAIWQMDNHGFPGFDKRNYEDAISAVNVCNYAAGFCAENGVQLYVQENKKLFNFT 171 G LI K+CN TE+ +ECIS ESD S +ANLT L + + S K+ + SY NATD+ T + C +Y+A+ Q+ G FD+ Y+ +V N AA C G+ + Q N LF T Sbjct: 13 GKALIAKTCNQTEYPEECISALESDASSL-SANLTGLGRIAVEQSASKLNQTLSYVDSLVNNATDYATWASLVICQYSYNASANQIQ-QGLQAFDRLKYDKTYQSVAAVNQAAIECNNQGLGILTQVNTALFRLT 145 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_014380.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_014380.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_014380.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_014380.1_cmj_v1 ID=CMJ_chr3_014380.1_cmj_v1; Name=CMJ_chr3_014380.1; organism=Citrus maxima; type=mRNA; length=555bpback to top protein sequence of CMJ_chr3_014380.1_cmj_v1 >CMJ_chr3_014380.1_cmj_v1 ID=CMJ_chr3_014380.1_cmj_v1; Name=CMJ_chr3_014380.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=185bpback to top mRNA from alignment at chr3:33404655..33405443- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=789bp; location=Sequence derived from: chr3:33404655..33405443- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:33404655..33405443- >CMJ_chr3_014380.1_cmj_v1 ID=CMJ_chr3_014380.1_cmj_v1; Name=CMJ_chr3_014380.1; organism=Citrus maxima; type=CDS; length=555bp; location=Sequence derived from: chr3:33404655..33405443- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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