CMJ_chr3_014620.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_014620.1 vs. ExPASy TrEMBL
Match: A0A2H5PPY3|A0A2H5PPY3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_156560 PE=4 SV=1) HSP 1 Score: 602.053 bits (1551), Expect = 0.000e+0 Identity = 303/316 (95.89%), Postives = 303/316 (95.89%), Query Frame = 0 Query: 1 MANSLRKMNTVEEQSHANAAADKACRVLVDSCNAPKSPLAYFFSISIAQPKIRIKIPKALGKSIRKRSSDQCNDNTKKRGNAPEKLFAKKVGLIFSKVFSHKKREETCSSRAGKNSKAFGNGGKVGFGDVGSVESVSKGSERGGNGEGKQPKDVADVTLPKMKNILVFQEGGKKNRLDNGEQLPSKSLFNRKKDRFSLCRGNSRRSLSSAKGVAATDFVSGKLERSPELARVPARILASRQKLNRDRSMRKNLIGLFEEEGKREQRADEDLIFEKSLHHEVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPENIP 316 MANSLRKMNTVEEQSHANAAADKACRVLVDSCNAPKSPLAYFFSISIAQPKIRIKIPKALGKSIRKRSSDQCNDNTKKRGNAPEKLFAKKVGLIFSKVFSHKKREETCSSRAGKNSKAFGNGGKVGFGDVGSVESVSKGSERGGNGEGKQPKDVADVTLPKMKNILVFQEGGKK RLDNGEQLPSKSLFNRKKDRFSLCRGNSRRSLSSAKGVAATDFVSGKLERSPELARVPARIL SRQKLNRDRSMRKNLIGLFEEEGKREQRAD EVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPENIP Sbjct: 1 MANSLRKMNTVEEQSHANAAADKACRVLVDSCNAPKSPLAYFFSISIAQPKIRIKIPKALGKSIRKRSSDQCNDNTKKRGNAPEKLFAKKVGLIFSKVFSHKKREETCSSRAGKNSKAFGNGGKVGFGDVGSVESVSKGSERGGNGEGKQPKDVADVTLPKMKNILVFQEGGKKKRLDNGEQLPSKSLFNRKKDRFSLCRGNSRRSLSSAKGVAATDFVSGKLERSPELARVPARILTSRQKLNRDRSMRKNLIGLFEEEGKREQRAD-----------EVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPENIP 305
BLAST of CMJ_chr3_014620.1 vs. ExPASy TrEMBL
Match: V4TAW0|V4TAW0_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003158mg PE=4 SV=1) HSP 1 Score: 584.719 bits (1506), Expect = 0.000e+0 Identity = 295/316 (93.35%), Postives = 297/316 (93.99%), Query Frame = 0 Query: 1 MANSLRKMNTVEEQSHANAAADKACRVLVDSCNAPKSPLAYFFSISIAQPKIRIKIPKALGKSIRKRSSDQCNDNTKKRGNAPEKLFAKKVGLIFSKVFSHKKREETCSSRAGKNSKAFGNGGKVGFGDVGSVESVSKGSERGGNGEGKQPKDVADVTLPKMKNILVFQEGGKKNRLDNGEQLPSKSLFNRKKDRFSLCRGNSRRSLSSAKGVAATDFVSGKLERSPELARVPARILASRQKLNRDRSMRKNLIGLFEEEGKREQRADEDLIFEKSLHHEVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPENIP 316 MANSL+KMNTVEEQS NAAADKACRVLVD CNAPKSPLAYFFSISIAQPKIRIKIPKALGKSIRKRSSDQCND+TK RGNAPEKLFAKKVGLIFSKVFSHKKREETCSSRAGKNSKAF NGGKVGFGDVGSVESVSKGSERGGNGEGKQPKDVADV LPKMKNILVFQEGGKK RLDNGEQLPSKSLFNRKKDRFSLCRGNSRRSLSSAKGVAATDFVSGKLERSPELARVPARIL SRQKLNRDRSMRKNLIGLFEEEGKREQRAD EVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPENIP Sbjct: 1 MANSLQKMNTVEEQSRENAAADKACRVLVDPCNAPKSPLAYFFSISIAQPKIRIKIPKALGKSIRKRSSDQCNDSTKNRGNAPEKLFAKKVGLIFSKVFSHKKREETCSSRAGKNSKAFSNGGKVGFGDVGSVESVSKGSERGGNGEGKQPKDVADVALPKMKNILVFQEGGKKKRLDNGEQLPSKSLFNRKKDRFSLCRGNSRRSLSSAKGVAATDFVSGKLERSPELARVPARILTSRQKLNRDRSMRKNLIGLFEEEGKREQRAD-----------EVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPENIP 305
BLAST of CMJ_chr3_014620.1 vs. ExPASy TrEMBL
Match: A0A067H2I1|A0A067H2I1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035306mg PE=4 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.055e-40 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 Query: 249 MRKNLIGLFEEEGKREQRADEDLIFEKSLHHEVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPENIP 316 MRKNLIGLFEEEGKREQRADEDLIFEKSLHHEVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPENIP Sbjct: 1 MRKNLIGLFEEEGKREQRADEDLIFEKSLHHEVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPENIP 68
BLAST of CMJ_chr3_014620.1 vs. ExPASy TrEMBL
Match: A0A2N9ITY1|A0A2N9ITY1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56759 PE=4 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.859e-31 Identity = 107/315 (33.97%), Postives = 154/315 (48.89%), Query Frame = 0 Query: 39 LAYFFSISIAQPKIRIKIPKALGKSIRKRSS---DQCNDNTKKRGNAPEKLFAKKVGLIFSKVFSHKKREETCSSRAGKNSKAFGNGGKVGFGDVGSVESVSKGSERGGNGEGKQPKDVADVTLPK---MKNILVFQEGGKKNRLD----------NGEQLPSKSLF-------------------NRKKDRFSLCRGNSRRSLSSAKGVAATDF--VSGKLERSPELARVPARILASRQKLNRDRSMRKNLIGLFEEEGKREQRADEDLIFEKSLHHEVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPENIP 316 ++YF +I +PKIR+K PK + K+++KR D ++NTKK +AKKVG++FS V KK E CS G N + G + E+ + G + G+ + +L K +K +L ++ G + R+D ++LP K N++ D S+C G + S+ GV T ++GK S L RVP++IL +RQKL RS+RK E++ EQ +DE + EK LCKKRILMG KCRPL SG L+Y KDGILLPE +P Sbjct: 26 MSYFKRFTIPKPKIRVKFPKLIVKTMQKRCHFCKDDHSNNTKK--------WAKKVGIVFSGVMGKKKSVEACSYN-GTNVEVHRENGDGLCDSLHERETDNSGINKMDCGDEQPFLGAPKFSLSKSHSLKEVLDTEDEGNQKRIDKVKSSIQVSVTKQKLPMKKFLSFSSICSKKIRMKSIKGKINKENDSCSICDGCGEANSSTTVGVVTTSSFRLTGKQGSSGHLIRVPSKILTTRQKLKVARSLRKKENKQLEQDS--EQESDEKVRDEKGDLE--LCKKRILMGAKCRPLGFSGILRYGKDGILLPEVLP 327
BLAST of CMJ_chr3_014620.1 vs. ExPASy TrEMBL
Match: A0A7N2L5E6|A0A7N2L5E6_QUELO (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.482e-30 Identity = 106/276 (38.41%), Postives = 152/276 (55.07%), Query Frame = 0 Query: 43 FSISIAQPKIRIKIPKALGKSIRKRSSDQCNDNTKKRGNAPEKLFAKKVGLIFSKVFSHKKREETCSSRAGKNSKAFGNGG--KVGFGDVGSVESVSKGSERGGNGEGK---QPKDVADVTLPKMKNILVFQEGGKKNRLDNGEQLPSKSLFNRKKDRFSLCRGNSRRSLSSAKGVAATDFVSGKLERSPELARVPARILASRQKLNRDRSMRKNLIGLFEEEGKREQRADEDLIFEKSLHHEVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPE 313 SIS +PKIRIK+PK + K ++KR +D++K + K +AK+VG +FS V +K + CSS +N + + KVG + S + ++G ++ NG+ K QP+ VA+ LP K + +KNR + K N++ D S+C G S + + GV + + GK S L RV ++IL +R+KL RS+RK + FE G E+ +D + L LCKKRILMGEKCRPL SGTL+YDKDGILLPE Sbjct: 5 LSISYFKPKIRIKVPKLIAKIMQKRCRQCIDDHSKNK-----KKWAKQVGSVFSGVMRKRKSVDACSSN-DRNEELYRKTAMNKVGSETLKSEKDTTEGMQKR-NGKVKSSIQPR-VAN-KLPTKKFLSFTSFFNRKNRKN-----FIKGNINKENDSCSICDGCSTPNFRTVGGVTTSFRLIGKQGSSGHLIRVRSKILTTRKKLRVARSLRKKMNKQFER-GSEEENDGKDKEEKGELE---LCKKRILMGEKCRPLGFSGTLQYDKDGILLPE 262
BLAST of CMJ_chr3_014620.1 vs. ExPASy TrEMBL
Match: A0A5J5BRI2|A0A5J5BRI2_9ASTE (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_020000 PE=4 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.148e-23 Identity = 102/325 (31.38%), Postives = 143/325 (44.00%), Query Frame = 0 Query: 24 ACRVLV--DSCNAPKSPLAYFFSISIAQPKIRIKIPKALGKSIRKRS------SDQCNDN-TKKRGNAPEKLFA-KKVGLIFSKVFSHKKREETCSSRAGKNSKAFGNGG--------------KVGFGDVGSVESVSKGSERGGNGEGKQPKDVADVTLPKMKNILVFQEGGKKNRLDNGEQLPSKSLFNRKKDRFSLCRGNSRRSLSSA-------KGVAATDFVSGKLERSPELARVPA-RILASRQKLNRDRSMRKNLIGLFEEEGKREQRADEDLIFEKSLHHEVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPENIP 316 CR L+ D P SPL+YF SI+I QPK+RIKIPK L K++++RS +D+ + N K + P +LF KKVG I VF KK +E N K G ++ +E+ + E + Q D+AD K L L LF KD S +G ++ + + GV ++ V GK E S L RVP+ R + R + R +S RK + + + + E LCKKRILMG +CR ++ SG L YD++GILLPE IP Sbjct: 8 TCRALITRDPNMPPNSPLSYFISITIPQPKLRIKIPKLLVKTMQRRSQKCSNEADEFDQNKNKNKCVKPRRLFLRKKVGSIIHNVFGSKKSQEIMEELEEDNEKKLNCGDGPFQISTPETKISKSYSLKEILEIENEREKQEMLEGLKSSQQSDMAD-----------------KQPLKGPGSLSLSGLF-ITKDHLSFIKGKMNKACNCSYRDKRGDNGVGSSFRVIGKQESSSNLTRVPSGRAIGCRN-IRRVKSTRK--------------KVTKQVEEDSEQEGEELCKKRILMGGRCRTINLSGALHYDENGILLPEAIP 299
BLAST of CMJ_chr3_014620.1 vs. ExPASy TrEMBL
Match: A0A5N5KFQ9|A0A5N5KFQ9_9ROSI (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_019262 PE=4 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.876e-22 Identity = 112/322 (34.78%), Postives = 159/322 (49.38%), Query Frame = 0 Query: 24 ACRVLVDSCNAPKSPLAYFFSISIAQPKIRIKIPKALGKSIRKRSSDQC-----NDNT---KKRGNAPEKLFAKKVGLIFSKVFSHKKREETCSSRAGKNSKAFGNGGKVGFGDVGSVESVSKGSERGGNGEGKQPKDVADVTLPKMKNILVFQEGGK--KNRLDNGEQLPSKSL------------FNRKKDRFSLCRGNS-------RRSLSS---AKGVAATDFVSGKLERSPELARVPARILASRQKLNRDRSMRKNLIGLFEEEGKREQRADEDLIFEKSLHHEVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPE 313 CR ++ S ++P S SI+ +PKIRI+IPK L K++ +R+SD C +D+T K+R P+ L +K+GL FS VF KK + SS+ KN G+G K DV V+ GG +G QP +VA + + I +E GK K ++ E PS++ F K + RG + RR +S A G ++ +G+ E S L R P+R+ ++R K+ G EE RE+ DE LCKKRILMGEKC+PL+ SG+L YD+DGILLPE Sbjct: 18 TCRDIIASNDSPNSQRCNVSSITPPEPKIRIRIPKLLAKTM-QRTSDDCITDHLDDHTRAKKERVVQPKSLLPQKLGLFFSSVFGKKKSPKA-SSKVHKN----GDGYK---SDVAVVD--------GGLHDGDQPFEVAPKSPLHLLEIEEEEEEGKNGKPAIERRENKPSRAADMYLKVSFPFLSFFTKYTGLNFFRGKTITDHTVLRRQGTSHNLASGARVSETPAGRQESSGNLLRNPSRVPSTRGKIG-------GKPGQAGEE-SREESGDE------------LCKKRILMGEKCKPLNLSGSLHYDEDGILLPE 302
BLAST of CMJ_chr3_014620.1 vs. ExPASy TrEMBL
Match: A0A1Q3D6G3|A0A1Q3D6G3_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31494 PE=4 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.281e-22 Identity = 94/286 (32.87%), Postives = 130/286 (45.45%), Query Frame = 0 Query: 77 KKRGNAPEKLFAKKVGLIFSKVFSHKKREETCSSRAGKNSKAFGNGGK-VGFG------------DVGSVESVSKGSERGGNGEGKQPKDVADVTLPKMKNILVFQEGGKKNRLDNGE---QLPS--KSLFNRKKDRF-----------------------SLCRGNSRRSLSSAKGV--------AATDFVSGKLERSPELARVPARILASRQKLNRDRSMRKNLIGLFEEEGKREQRADEDLIFEKSLHHEVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPE 313 K++ P +F K+G + SK F+H K E CSS KN GN +G+G D+GSV + + SE NGE + +A K +L ++ +K+ E Q PS K L K F + C+ NS S + G A V G+ ER L RVP+RIL +R+KL RS++ + G EG+RE R D++L CKKRILMGE+C+PL+ SG+L YD +GILLPE Sbjct: 14 KRKWAKPGMVFPNKIGSVLSKFFAHNKGPEPCSSSGDKNGNDCGNDDHGLGYGKDIKIFRKDESYDMGSVPNTVQNSENKLNGEDQL---LAIAPFHLYKKLLEIEDEEEKHGSHGDEKRQQQPSTAKKLLQEKSLSFFHKRSGLNFIRRKVKNANTGTATTSCKSNSNGGDSGSIGNGTNTLNDNATKAIVIGRRERCRGLPRVPSRILTTRKKLRMARSIK--MWGSRRIEGEREDRGDKEL-----------CKKRILMGERCKPLNYSGSLHYDINGILLPE 283
BLAST of CMJ_chr3_014620.1 vs. ExPASy TrEMBL
Match: A0A5J5B4N9|A0A5J5B4N9_9ASTE (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_029265 PE=4 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.106e-21 Identity = 102/311 (32.80%), Postives = 151/311 (48.55%), Query Frame = 0 Query: 25 CRVLV-DSCNAPKSP-LAYFFSISIAQPKIRIKIPKALGKSIRKRSSDQCNDNT-------KKRGNAPEKLFAKKVGLIFSKVFSHKKREETCSSRAGKNSKAFGNGGKVGFGDVGSVESVSKGSERGGNGEGKQPKDVADVTLPKM-KNILVFQ--EGGKKNRLDNGEQ-----LPSKSLFNRKKDRFSLCRGNSRRSLS---SAKGVAATDFVSGKLERSPELARVPARILASRQKLNRDRSMRKNLIGLFEEEGKREQRADEDLIFEKSLHHEVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPENI 315 CR L + N P +P L+Y+ SI++ QP I++K+PK L KS + R+ +CND+ KK+ + KKVG I VF +KK +E CSS +K N + E V + + N GK ++D P + K IL + E GK+ + +Q L FN+K +G R+ S S +G ++ + V GK E S +RV + +K+ R +S+RK + EE ++ DE+L CKKRILMGEKCRPL+ SGTL+Y D + EN+ Sbjct: 11 CRALSRKNTNMPTNPPLSYYVSIAMPQPNIKVKMPKLLMKSKQGRNH-ECNDSADVDHSRKKKKWAQTRRFLPKKVGSIMHSVFGNKKSQEMCSSNC--ENKVVHNDCDGFKQSITESERVVEEDDLTKNLNGKTDSKMSD--QPHLLKEILEVENNEKGKQESVMADKQPLKVSLSLSCFFNKKT------KGKMNRTDSFSCSKRGDSSGNRVIGKQESSSNFSRVASSRQNGCRKIRRAKSVRKKVTKKVNEES---EQGDEEL-----------CKKRILMGEKCRPLNLSGTLQYVIDFTI--ENV 294
BLAST of CMJ_chr3_014620.1 vs. ExPASy TrEMBL
Match: A0A6A6M3U0|A0A6A6M3U0_HEVBR (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_026102 PE=4 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.661e-21 Identity = 107/328 (32.62%), Postives = 146/328 (44.51%), Query Frame = 0 Query: 26 RVLVDSCNAPKSPLAYFFSISIAQPKIRIKIPKALGKSIRKRSSDQCNDNTKKRGNAPEKLFAKKVGLIFSKVFSHKKREETCSSRAGKNSKAFGNGGKVGFGDVGSVES----------VSKGSERGGNGEG---------KQPKDVAD--VTLPKMKNILVFQEGGKKNRLDNGEQLPSKSLFNRKKDRFSLCRGNSRRSLSSAKGVA-ATDFVSGK------LERSPE---------LARVPARILASRQKLNRDRSMRKNLIGLFEEEGKREQRADEDLIFEKSLHHEVLCKKRILMGEKCRPLHQSGTLKYDKDGILLPENIP 316 R L+DS + +YF SI+I+Q KIRIKIPK L K+++KR ND T+ + N EK V IFS F+ K T S KV DV + +S E G G+ K+P ++ D P +NI ++ K ++ L LF+++ + C+ S ++ GV +D V G+ L R P L RVP+RIL R +S+ K EGK + D D + LCKKRILMGEKCRPL SG L+YD+DGILLP+ IP Sbjct: 11 RALIDSNSN-----SYFSSITISQTKIRIKIPKLLAKTMQKRG----NDRTRGKKNKWEK-----VSSIFSSAFNSNKLPRTYS--------------KVQISDVHDRDQEDGLAVAEAKISIKDESDGTGDQSPLSKSYSFKEPLEIEDGEQKRPNKENIPNNRQPRKADK-SLKMSLSFSRLFHKRANNAGGCQNTSDQN-----GVGRISDVVIGEQASTRSLARVPSTRNISDTVNLPRVPSRILTCRWNFEMSQSLTK-FTSRQGNEGKPSETEDRD--------GKELCKKRILMGEKCRPLSFSGILEYDRDGILLPDIIP 295 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_014620.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_014620.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_014620.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_014620.1_cmj_v1 ID=CMJ_chr3_014620.1_cmj_v1; Name=CMJ_chr3_014620.1; organism=Citrus maxima; type=mRNA; length=951bpback to top protein sequence of CMJ_chr3_014620.1_cmj_v1 >CMJ_chr3_014620.1_cmj_v1 ID=CMJ_chr3_014620.1_cmj_v1; Name=CMJ_chr3_014620.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=317bpback to top mRNA from alignment at chr3:33523130..33524080- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=951bp; location=Sequence derived from: chr3:33523130..33524080- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:33523130..33524080- >CMJ_chr3_014620.1_cmj_v1 ID=CMJ_chr3_014620.1_cmj_v1; Name=CMJ_chr3_014620.1; organism=Citrus maxima; type=CDS; length=951bp; location=Sequence derived from: chr3:33523130..33524080- (Citrus maximaback to top |