CMJ_chr3_014900.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_014900.1 vs. ExPASy TrEMBL
Match: A0A2H5PPZ2|A0A2H5PPZ2_CITUN (Phospholipase OS=Citrus unshiu OX=55188 GN=CUMW_156620 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.260e-11 Identity = 40/71 (56.34%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 13 GFPRGINDGGAATVP------------KETSILHDL--VARTQTVDYKISFYGLRPYGRLCDDGPVATSRV 69 GF GI+DGGAATV ++TSILH L + +T DY ISFYGLR YGRLCD GPVATS+V Sbjct: 849 GFQGGIDDGGAATVRAIIHWQYRTISREKTSILHKLSMLLGPKTRDY-ISFYGLRSYGRLCDGGPVATSQV 918
BLAST of CMJ_chr3_014900.1 vs. ExPASy TrEMBL
Match: V4TAV1|V4TAV1_CITCL (Phospholipase OS=Citrus clementina OX=85681 GN=CICLE_v10000089mg PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.260e-11 Identity = 40/71 (56.34%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 13 GFPRGINDGGAATVP------------KETSILHDL--VARTQTVDYKISFYGLRPYGRLCDDGPVATSRV 69 GF GI+DGGAATV ++TSILH L + +T DY ISFYGLR YGRLCD GPVATS+V Sbjct: 849 GFQGGIDDGGAATVRAIIHWQYRTISREKTSILHKLSMLLGPKTRDY-ISFYGLRSYGRLCDGGPVATSQV 918
BLAST of CMJ_chr3_014900.1 vs. ExPASy TrEMBL
Match: A0A067H2J0|A0A067H2J0_CITSI (Phospholipase OS=Citrus sinensis OX=2711 GN=CISIN_1g001225mg PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.260e-11 Identity = 40/71 (56.34%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 13 GFPRGINDGGAATVP------------KETSILHDL--VARTQTVDYKISFYGLRPYGRLCDDGPVATSRV 69 GF GI+DGGAATV ++TSILH L + +T DY ISFYGLR YGRLCD GPVATS+V Sbjct: 849 GFQGGIDDGGAATVRAIIHWQYRTISREKTSILHKLSMLLGPKTRDY-ISFYGLRSYGRLCDGGPVATSQV 918
BLAST of CMJ_chr3_014900.1 vs. ExPASy TrEMBL
Match: A0A6P5WTS4|A0A6P5WTS4_DURZI (Phospholipase OS=Durio zibethinus OX=66656 GN=LOC111277347 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.535e-11 Identity = 40/71 (56.34%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 13 GFPRGINDGGAATVP------------KETSILHDLVAR--TQTVDYKISFYGLRPYGRLCDDGPVATSRV 69 GF G+ND GAATV ++TSILH+L AR +T DY ISFYGLR YGRL D GPVATS+V Sbjct: 759 GFQGGLNDNGAATVRALVHWQYRTISREKTSILHNLNARLGPKTWDY-ISFYGLRSYGRLSDGGPVATSQV 828
BLAST of CMJ_chr3_014900.1 vs. ExPASy TrEMBL
Match: A0A6P5WUH6|A0A6P5WUH6_DURZI (Phospholipase OS=Durio zibethinus OX=66656 GN=LOC111277347 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.545e-11 Identity = 40/71 (56.34%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 13 GFPRGINDGGAATVP------------KETSILHDLVAR--TQTVDYKISFYGLRPYGRLCDDGPVATSRV 69 GF G+ND GAATV ++TSILH+L AR +T DY ISFYGLR YGRL D GPVATS+V Sbjct: 837 GFQGGLNDNGAATVRALVHWQYRTISREKTSILHNLNARLGPKTWDY-ISFYGLRSYGRLSDGGPVATSQV 906
BLAST of CMJ_chr3_014900.1 vs. ExPASy TrEMBL
Match: A0A7J7D1S5|A0A7J7D1S5_TRIWF (Phospholipase OS=Tripterygium wilfordii OX=458696 GN=HS088_TW11G00089 PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 4.166e-10 Identity = 39/71 (54.93%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 13 GFPRGINDGGAATVP------------KETSILHDL--VARTQTVDYKISFYGLRPYGRLCDDGPVATSRV 69 GF G++DGGAATV ++TSILH+L V +T DY ISFYGLR YGRL D GPVATS+V Sbjct: 840 GFQGGVDDGGAATVRAIMHWQYRTISREKTSILHNLNEVLGPKTRDY-ISFYGLRSYGRLFDGGPVATSQV 909
BLAST of CMJ_chr3_014900.1 vs. Araport11
Match: AT3G05630.1 (| phospholipase D P2 | Chr3:1635321-1640105 FORWARD LENGTH=1046 | 201606) HSP 1 Score: 55.8398 bits (133), Expect = 8.034e-11 Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 0 Query: 13 GFPRGINDGGAATVP------------KETSILHDLVAR--TQTVDYKISFYGLRPYGRLCDDGPVATSRV 69 GF GI+D GAATV + TSIL +L A +T DY ISFYGLR YGRL +DGP+ATS++ Sbjct: 780 GFQGGIDDFGAATVRALMHWQYRTISREGTSILDNLNALLGPKTQDY-ISFYGLRSYGRLFEDGPIATSQI 849 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_014900.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 6 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_014900.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_014900.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 1 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_014900.1_cmj_v1 ID=CMJ_chr3_014900.1_cmj_v1; Name=CMJ_chr3_014900.1; organism=Citrus maxima; type=mRNA; length=210bpback to top protein sequence of CMJ_chr3_014900.1_cmj_v1 >CMJ_chr3_014900.1_cmj_v1 ID=CMJ_chr3_014900.1_cmj_v1; Name=CMJ_chr3_014900.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=70bpback to top mRNA from alignment at chr3:33670475..33670777- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=303bp; location=Sequence derived from: chr3:33670475..33670777- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:33670475..33670777- >CMJ_chr3_014900.1_cmj_v1 ID=CMJ_chr3_014900.1_cmj_v1; Name=CMJ_chr3_014900.1; organism=Citrus maxima; type=CDS; length=210bp; location=Sequence derived from: chr3:33670475..33670777- (Citrus maximaback to top |