CMJ_chr3_015270.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_015270.1 vs. ExPASy TrEMBL
Match: A0A067H1R5|A0A067H1R5_CITSI (BHLH domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035883mg PE=4 SV=1) HSP 1 Score: 401.749 bits (1031), Expect = 6.807e-141 Identity = 204/225 (90.67%), Postives = 206/225 (91.56%), Query Frame = 0 Query: 1 MDSFDESNCDTSLDMEPKRKKRRIGNNNDGGGEDELI-------------------LYREVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSARTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAGSSPADDRLGLNVVRS 206
MDSFDESNCDTSLDMEPKRKKRRIGNN+DGGGEDELI +YREVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSARTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAGSSPADDRLGLNVVRS
Sbjct: 1 MDSFDESNCDTSLDMEPKRKKRRIGNNDDGGGEDELIRRRQRNDDDDDDDDDSRNAVYREVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSARTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAGSSPADDRLGLNVVRS 225
BLAST of CMJ_chr3_015270.1 vs. ExPASy TrEMBL
Match: V4SGJ6|V4SGJ6_CITCL (BHLH domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10002396mg PE=4 SV=1) HSP 1 Score: 395.586 bits (1015), Expect = 1.928e-138 Identity = 203/224 (90.62%), Postives = 205/224 (91.52%), Query Frame = 0 Query: 1 MDSFDESNCDTSLDMEPKRKKRRIGNNNDG-GGEDELI-----------------LYREVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSARTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAGSSPADDRLGLNVVRS 206
MDSFDESNCDTSLDMEPKRKKRRIGNN+DG GGEDELI YREVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSARTGKAIRETADRL+AVSAKGATRWSRAILSSPPSLRLKKRQVKVRVTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAGSSPADDRLGLNVVRS
Sbjct: 1 MDSFDESNCDTSLDMEPKRKKRRIGNNDDGVGGEDELIRRRQRNDDDDDDDSRNAAYREVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSARTGKAIRETADRLMAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAGSSPADDRLGLNVVRS 224
BLAST of CMJ_chr3_015270.1 vs. ExPASy TrEMBL
Match: A0A5C7I8E6|A0A5C7I8E6_9ROSI (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_006716 PE=4 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.846e-55 Identity = 137/226 (60.62%), Postives = 161/226 (71.24%), Query Frame = 0 Query: 1 MDSFD------ESNCDTSLD---MEPKRKKRRIGN--NNDGGGEDELILYREVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSARTGKA--IRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVT---GCSRLRRKPEEA----MRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAG---SSPADDRLGLNV 203
M+SF ESNC TS MEPKRK+RRI + + DGGG ++ KRWRT+KEQQIYSSKL QA+RHVR R+ S TG+ +RETADR+LAVSAKGATRWSRA+LSS SLRLK+R KV+V GC+RL+++ + ++ KLP V KLRVLGR+IPGCRK S LNLLEEATDYI+ALEMQVRAM AL ILA SSPADDRLG NV
Sbjct: 1 MESFIVSNDHVESNCGTSSSSSSMEPKRKRRRIESQEDADGGGGNQ----NATVKRWRTEKEQQIYSSKLLQALRHVRSRNQSQTTGRGRDVRETADRVLAVSAKGATRWSRAMLSSSLSLRLKRRHRKVKVAAVIGCNRLKKELKTTEMLNKKKNKKLPVVDMKLRVLGRLIPGCRKASCLNLLEEATDYIAALEMQVRAMAALAEILAAAAQSSPADDRLGANV 222
BLAST of CMJ_chr3_015270.1 vs. ExPASy TrEMBL
Match: A0A6A1WXL6|A0A6A1WXL6_9ROSI (BHLH domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR1G020885 PE=4 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 9.708e-52 Identity = 100/164 (60.98%), Postives = 126/164 (76.83%), Query Frame = 0 Query: 45 RWRTDKEQQIYSSKLFQAVRHVRRRS---SSARTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRL----KKRQVKV-RVTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAGSSPADDRLG 200
RW+++ +Q+IYS+KL +A+RHVR+ S S + +G+ IR ADR+LAV+AKG TRWSRAIL+S SLRL K R+ K +VTGCSRL+R PE +K LP VQKK++VLGR++PGCRKVS NLLEEATDYI+ALEMQVRAMTALT +L G+ DRLG
Sbjct: 33 RWKSESQQRIYSTKLVEALRHVRQNSLPTSKSPSGREIRHAADRVLAVAAKGRTRWSRAILASRLSLRLANSRKHRKAKPGKVTGCSRLKR-PE----KKRSLPAVQKKVKVLGRLVPGCRKVSFPNLLEEATDYIAALEMQVRAMTALTELLTGA--PVDRLG 189
BLAST of CMJ_chr3_015270.1 vs. ExPASy TrEMBL
Match: A0A5B7A6Q9|A0A5B7A6Q9_DAVIN (BHLH domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_020692 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.716e-50 Identity = 102/187 (54.55%), Postives = 130/187 (69.52%), Query Frame = 0 Query: 31 GGEDELILYREVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSARTG-----KAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVR------VTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAGSSP---ADDRLGLNV 203
G E+++ + RW+T+ EQQIYSSKL A+R VR+ SSS T + IRETADR+LAV+AKG TRWSRAIL+SP SL+L K K + VTG +RL+ KP K +LP +Q+K+ VLGR++PGCRK+S NLLEEATDYI+ALEMQVRAMT LT +L G+ P + DRLG N+
Sbjct: 28 GSENQIEEAKMERTRWKTEAEQQIYSSKLIAALRQVRQNSSSPATASPARSRVIRETADRVLAVAAKGRTRWSRAILTSPLSLKLSKINNKHKKHKKMKVTGDNRLK-KPV----LKKRLPALQRKVLVLGRLVPGCRKLSFPNLLEEATDYIAALEMQVRAMTTLTGLLTGAGPLAASSDRLGSNL 209
BLAST of CMJ_chr3_015270.1 vs. ExPASy TrEMBL
Match: A0A6J1A5F9|A0A6J1A5F9_9ROSI (transcription factor bHLH149 OS=Herrania umbratica OX=108875 GN=LOC110415073 PE=4 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.768e-49 Identity = 112/202 (55.45%), Postives = 139/202 (68.81%), Query Frame = 0 Query: 8 NCDTSLDMEP--KRKKRRIGNNNDGGGEDELILYREVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSARTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLK--KRQVKVRVTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILA--GSSPADDRLGLNV 203
N + S D P KRKKRR + G + R KRWRT++EQQIYSSKL +A+R RR SSSA K +RETADR+LAVSAKG TRWSRAIL+S + K ++ + +VT RLR KPE K KLP V++KL+VLGR++PGCRKVS NLLEE +DYI+ALEMQVRAMT +TA+LA G+ P DRLG ++
Sbjct: 7 NLEHSPDTSPEFKRKKRRKTDETPGPFDRNQGSQR--IKRWRTEREQQIYSSKLIEALRRSRRTSSSA-PAKEVRETADRVLAVSAKGTTRWSRAILASRLGVGSKTMRKHKRAKVTANRRLR-KPE-INGEKRKLPAVERKLKVLGRLVPGCRKVSFSNLLEETSDYIAALEMQVRAMTTITALLAGGGTQPPTDRLGSHI 203
BLAST of CMJ_chr3_015270.1 vs. ExPASy TrEMBL
Match: A0A1J3K717|A0A1J3K717_NOCCA (BHLH domain-containing protein OS=Noccaea caerulescens OX=107243 GN=MP_TR17949_c2_g1_i1_g.51340 PE=4 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.879e-49 Identity = 98/193 (50.78%), Postives = 128/193 (66.32%), Query Frame = 0 Query: 6 ESNCDTSLDMEPKRKKRRIGNNNDGGGEDELILYREVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSAR----TGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAGSSP 194
E+ D E RKKRRI + + + E KRWRT++ QQIYS KL +A+R VR+RS+ A + IRETADR+LA SA+G TRWSRAI+++ RLKK + K + TG + R+ E R KLP V++KL++LGR++PGCRKVS NLL+EATDYI+ALEMQVRAM AL ILA ++P
Sbjct: 10 ENTGDDDASPESSRKKRRISETSKEAETEARRINEESLKRWRTNRVQQIYSCKLVEALRRVRQRSNDAGKVSGAAREIRETADRVLAASARGTTRWSRAIIATRVRARLKKHR-KAKSTGNIKSRKATTETKR--IKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVRAMEALAEILATAAP 199
BLAST of CMJ_chr3_015270.1 vs. ExPASy TrEMBL
Match: A0A1J3I698|A0A1J3I698_NOCCA (BHLH domain-containing protein OS=Noccaea caerulescens OX=107243 GN=LE_TR6215_c0_g1_i1_g.22596 PE=4 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 5.743e-49 Identity = 97/193 (50.26%), Postives = 128/193 (66.32%), Query Frame = 0 Query: 6 ESNCDTSLDMEPKRKKRRIGNNNDGGGEDELILYREVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSAR----TGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAGSSP 194
E+ D E RKKRRI + + + E KRWRT++ QQIYS KL +A+R VR+RS+ A + IRETADR+LA SA+G TRWSRAI+++ RLKK + K + TG + R+ E R KLP V++KL++LGR++PGCRKV+ NLL+EATDYI+ALEMQVRAM AL ILA ++P
Sbjct: 10 ENTGDDDASPESSRKKRRISETSKEAETEARRINEESLKRWRTNRVQQIYSCKLVEALRRVRQRSNDASKVSGAAREIRETADRVLAASARGTTRWSRAIIATRVRARLKKHR-KAKSTGNIKSRKATTETKR--IKLPAVERKLKILGRLVPGCRKVTVPNLLDEATDYIAALEMQVRAMEALAEILATAAP 199
BLAST of CMJ_chr3_015270.1 vs. ExPASy TrEMBL
Match: A0A5N6QT66|A0A5N6QT66_9ROSI (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_006726 PE=4 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 9.542e-49 Identity = 98/164 (59.76%), Postives = 121/164 (73.78%), Query Frame = 0 Query: 45 RWRTDKEQQIYSSKLFQAVRHVRRRSSSA---RTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRL----KKRQVKV-RVTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAGSSPADDRLG 200
RWR+++EQ+IYS+KLF+A+R VRR SS A G +RE ADR+LAVSAKG TRWSRAIL+S LRL K ++ K +VTG +RL+R +K LP VQ+K +VL R++PGCRKVS NLLEEA+DYI+ALEMQVRAMTALT +L G SP DRLG
Sbjct: 35 RWRSEREQRIYSTKLFEALRQVRRNSSPAFKVSGGLQVREAADRVLAVSAKGRTRWSRAILTSRLGLRLGCNNKHKKAKAGKVTGSNRLKRPA-----KKRHLPAVQRKAKVLSRLVPGCRKVSFPNLLEEASDYIAALEMQVRAMTALTELLTG-SPV-DRLG 191
BLAST of CMJ_chr3_015270.1 vs. ExPASy TrEMBL
Match: A0A6D2J7V0|A0A6D2J7V0_9BRAS (BHLH domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS24319 PE=4 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.103e-48 Identity = 100/200 (50.00%), Postives = 133/200 (66.50%), Query Frame = 0 Query: 1 MDSFDESNCDTSLDMEPKR--KKRRIGNNNDGGGEDELILYREVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSAR----TGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAGSSP 194
+D+ S +T D P+ KKRRI + + + E KRWRT++ QQIYSSKL +A+R VR+RS+ A + IRETADR+LA SA+G TRWSRAI+++ RL+K Q K + TG + R+ E R KLP V++KL++LGR++PGCRKVS NLL+EATDYI+ALEMQVRAM AL ILA ++P
Sbjct: 2 VDTLFPSIENTGDDASPESRWKKRRISETSKEAETEARRINEESLKRWRTNRVQQIYSSKLVEALRRVRQRSNDAGKVSGAAREIRETADRVLAASARGTTRWSRAIIATRVRARLRK-QRKAKSTGNIKSRKATAETKR--IKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVRAMEALAEILATAAP 198
BLAST of CMJ_chr3_015270.1 vs. ExPASy Swiss-Prot
Match: BH149_ARATH (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 8.129e-40 Identity = 86/175 (49.14%), Postives = 115/175 (65.71%), Query Frame = 0 Query: 18 KRKKRRIGNNNDGGGEDELILYREVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSART----------GKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAM 182
+RKK RI + E + E KRW+T++ QQIY+ KL +A+R VR+RSS+ + IR+TADR+LA SA+G TRWSRAIL+S +LKK + + TG + R+ E R KLP V++KL++LGR++PGCRKVS NLL+EATDYI+ALEMQVRAM
Sbjct: 17 RRKKPRISETAEAEIEARRV-NEESLKRWKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKSTGNCKSRKGLTETNR--IKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVRAM 188
BLAST of CMJ_chr3_015270.1 vs. ExPASy Swiss-Prot
Match: BH148_ARATH (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.643e-35 Identity = 81/176 (46.02%), Postives = 114/176 (64.77%), Query Frame = 0 Query: 41 EVTKRWRTDKEQQIYSSKLFQAVRHVR--------RRSSSARTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQ----------VKVRVTGCSRLRRKPEEAMRRKNK--LPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILA--GSSP 194
E+ RWR++K+Q+IYS+KLFQA++ VR ++ + GKA+RE ADR LAVSA+G T WSRAIL++ L+ +K++ + V+ S RK ++ R NK +P V +K+RVLGR++PGC K S +LEEATDYI ALEMQVRAM +L +L+ GS+P
Sbjct: 43 EIHARWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAP 218
BLAST of CMJ_chr3_015270.1 vs. ExPASy Swiss-Prot
Match: BH147_ARATH (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.816e-34 Identity = 71/160 (44.38%), Postives = 104/160 (65.00%), Query Frame = 0 Query: 44 KRWRTDKEQQIYSSKLFQAVRHVRRRSSSA--------RTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVT---------GCSRLRRKPEEAMRRKNK-LPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTAL 185
++WR++K+QQIYS+KL A+R +R + R G+A+RE ADR LAV+A+G T WSRAILS L+ +K + + R++ G R +++ +R K K LP VQ+K++VL R++PGCRK S +LEE TDYI+A+EMQ+R MTA+
Sbjct: 48 EKWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHK-RQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAI 206
BLAST of CMJ_chr3_015270.1 vs. ExPASy Swiss-Prot
Match: BH150_ARATH (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.983e-30 Identity = 68/168 (40.48%), Postives = 101/168 (60.12%), Query Frame = 0 Query: 40 REVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSARTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVTGCSRLRRKPEEAM----------RRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAGSSPADD 197
R +++RWR Q++YS KL+ A++ RR ++ +R+TAD++LA +A+GATRWSRAIL S L++R+ KP A+ R+ KL V ++RVLG ++PGCR+ + LL+E DYI+ALEMQVRAMTAL+ IL+ P+ +
Sbjct: 57 RHLSRRWRATTAQKVYSLKLYDALQRSRRSAT-------VRDTADKVLATTARGATRWSRAILVSRFGTSLRRRR-----------NTKPASALAAAIRGSGGSGRRRKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQPSTN 206
BLAST of CMJ_chr3_015270.1 vs. Araport11
Match: AT1G09250.1 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr1:2989509-2990132 FORWARD LENGTH=207 | 201606) HSP 1 Score: 138.272 bits (347), Expect = 8.317e-41 Identity = 86/175 (49.14%), Postives = 115/175 (65.71%), Query Frame = 0 Query: 18 KRKKRRIGNNNDGGGEDELILYREVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSART----------GKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVTGCSRLRRKPEEAMRRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAM 182
+RKK RI + E + E KRW+T++ QQIY+ KL +A+R VR+RSS+ + IR+TADR+LA SA+G TRWSRAIL+S +LKK + + TG + R+ E R KLP V++KL++LGR++PGCRKVS NLL+EATDYI+ALEMQVRAM
Sbjct: 17 RRKKPRISETAEAEIEARRV-NEESLKRWKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKSTGNCKSRKGLTETNR--IKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVRAM 188
BLAST of CMJ_chr3_015270.1 vs. Araport11
Match: AT3G06590.4 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr3:2054647-2055312 REVERSE LENGTH=221 | 201606) HSP 1 Score: 125.946 bits (315), Expect = 6.797e-36 Identity = 81/176 (46.02%), Postives = 114/176 (64.77%), Query Frame = 0 Query: 41 EVTKRWRTDKEQQIYSSKLFQAVRHVR--------RRSSSARTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQ----------VKVRVTGCSRLRRKPEEAMRRKNK--LPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILA--GSSP 194
E+ RWR++K+Q+IYS+KLFQA++ VR ++ + GKA+RE ADR LAVSA+G T WSRAIL++ L+ +K++ + V+ S RK ++ R NK +P V +K+RVLGR++PGC K S +LEEATDYI ALEMQVRAM +L +L+ GS+P
Sbjct: 43 EIHARWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAP 218
BLAST of CMJ_chr3_015270.1 vs. Araport11
Match: AT3G06590.3 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr3:2054647-2055312 REVERSE LENGTH=221 | 201606) HSP 1 Score: 125.946 bits (315), Expect = 6.797e-36 Identity = 81/176 (46.02%), Postives = 114/176 (64.77%), Query Frame = 0 Query: 41 EVTKRWRTDKEQQIYSSKLFQAVRHVR--------RRSSSARTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQ----------VKVRVTGCSRLRRKPEEAMRRKNK--LPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILA--GSSP 194
E+ RWR++K+Q+IYS+KLFQA++ VR ++ + GKA+RE ADR LAVSA+G T WSRAIL++ L+ +K++ + V+ S RK ++ R NK +P V +K+RVLGR++PGC K S +LEEATDYI ALEMQVRAM +L +L+ GS+P
Sbjct: 43 EIHARWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAP 218
BLAST of CMJ_chr3_015270.1 vs. Araport11
Match: AT3G06590.2 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr3:2054647-2055312 REVERSE LENGTH=221 | 201606) HSP 1 Score: 125.946 bits (315), Expect = 6.797e-36 Identity = 81/176 (46.02%), Postives = 114/176 (64.77%), Query Frame = 0 Query: 41 EVTKRWRTDKEQQIYSSKLFQAVRHVR--------RRSSSARTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQ----------VKVRVTGCSRLRRKPEEAMRRKNK--LPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILA--GSSP 194
E+ RWR++K+Q+IYS+KLFQA++ VR ++ + GKA+RE ADR LAVSA+G T WSRAIL++ L+ +K++ + V+ S RK ++ R NK +P V +K+RVLGR++PGC K S +LEEATDYI ALEMQVRAM +L +L+ GS+P
Sbjct: 43 EIHARWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAP 218
BLAST of CMJ_chr3_015270.1 vs. Araport11
Match: AT3G06590.1 (| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr3:2054647-2055312 REVERSE LENGTH=221 | 201606) HSP 1 Score: 125.946 bits (315), Expect = 6.797e-36 Identity = 81/176 (46.02%), Postives = 114/176 (64.77%), Query Frame = 0 Query: 41 EVTKRWRTDKEQQIYSSKLFQAVRHVR--------RRSSSARTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQ----------VKVRVTGCSRLRRKPEEAMRRKNK--LPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILA--GSSP 194
E+ RWR++K+Q+IYS+KLFQA++ VR ++ + GKA+RE ADR LAVSA+G T WSRAIL++ L+ +K++ + V+ S RK ++ R NK +P V +K+RVLGR++PGC K S +LEEATDYI ALEMQVRAM +L +L+ GS+P
Sbjct: 43 EIHARWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAP 218
BLAST of CMJ_chr3_015270.1 vs. Araport11
Match: AT3G17100.2 (| sequence-specific DNA binding transcription factor | Chr3:5831552-5832244 FORWARD LENGTH=230 | 201606) HSP 1 Score: 125.176 bits (313), Expect = 1.858e-35 Identity = 71/160 (44.38%), Postives = 104/160 (65.00%), Query Frame = 0 Query: 44 KRWRTDKEQQIYSSKLFQAVRHVRRRSSSA--------RTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVT---------GCSRLRRKPEEAMRRKNK-LPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTAL 185
++WR++K+QQIYS+KL A+R +R + R G+A+RE ADR LAV+A+G T WSRAILS L+ +K + + R++ G R +++ +R K K LP VQ+K++VL R++PGCRK S +LEE TDYI+A+EMQ+R MTA+
Sbjct: 48 EKWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHK-RQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAI 206
BLAST of CMJ_chr3_015270.1 vs. Araport11
Match: AT3G17100.1 (| sequence-specific DNA binding transcription factor | Chr3:5831552-5832244 FORWARD LENGTH=230 | 201606) HSP 1 Score: 125.176 bits (313), Expect = 1.858e-35 Identity = 71/160 (44.38%), Postives = 104/160 (65.00%), Query Frame = 0 Query: 44 KRWRTDKEQQIYSSKLFQAVRHVRRRSSSA--------RTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVT---------GCSRLRRKPEEAMRRKNK-LPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTAL 185
++WR++K+QQIYS+KL A+R +R + R G+A+RE ADR LAV+A+G T WSRAILS L+ +K + + R++ G R +++ +R K K LP VQ+K++VL R++PGCRK S +LEE TDYI+A+EMQ+R MTA+
Sbjct: 48 EKWRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHK-RQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAI 206
BLAST of CMJ_chr3_015270.1 vs. Araport11
Match: AT3G05800.1 (| AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 | Chr3:1727476-1728111 FORWARD LENGTH=211 | 201606) HSP 1 Score: 114.39 bits (285), Expect = 2.028e-31 Identity = 68/168 (40.48%), Postives = 101/168 (60.12%), Query Frame = 0 Query: 40 REVTKRWRTDKEQQIYSSKLFQAVRHVRRRSSSARTGKAIRETADRLLAVSAKGATRWSRAILSSPPSLRLKKRQVKVRVTGCSRLRRKPEEAM----------RRKNKLPPVQKKLRVLGRMIPGCRKVSSLNLLEEATDYISALEMQVRAMTALTAILAGSSPADD 197
R +++RWR Q++YS KL+ A++ RR ++ +R+TAD++LA +A+GATRWSRAIL S L++R+ KP A+ R+ KL V ++RVLG ++PGCR+ + LL+E DYI+ALEMQVRAMTAL+ IL+ P+ +
Sbjct: 57 RHLSRRWRATTAQKVYSLKLYDALQRSRRSAT-------VRDTADKVLATTARGATRWSRAILVSRFGTSLRRRR-----------NTKPASALAAAIRGSGGSGRRRKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQPSTN 206 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_015270.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_015270.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 4 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_015270.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 8 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_015270.1_cmj_v1 ID=CMJ_chr3_015270.1_cmj_v1; Name=CMJ_chr3_015270.1; organism=Citrus maxima; type=mRNA; length=621bpback to top protein sequence of CMJ_chr3_015270.1_cmj_v1 >CMJ_chr3_015270.1_cmj_v1 ID=CMJ_chr3_015270.1_cmj_v1; Name=CMJ_chr3_015270.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=207bpback to top mRNA from alignment at chr3:33889300..33889974+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=675bp; location=Sequence derived from: chr3:33889300..33889974+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:33889300..33889974+ >CMJ_chr3_015270.1_cmj_v1 ID=CMJ_chr3_015270.1_cmj_v1; Name=CMJ_chr3_015270.1; organism=Citrus maxima; type=CDS; length=621bp; location=Sequence derived from: chr3:33889300..33889974+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|