CMJ_chr3_015320.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of CMJ_chr3_015320.1 vs. ExPASy TrEMBL
Match: A0A2H5QEZ8|A0A2H5QEZ8_CITUN (IGR domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_223490 PE=4 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 6.002e-74 Identity = 107/109 (98.17%), Postives = 109/109 (100.00%), Query Frame = 0 Query: 1 MAWRQVFNNARANSMVAASGFSRFFSSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
MAWRQ+FNNARANSMVAASGFSRFF+SKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA
Sbjct: 1 MAWRQIFNNARANSMVAASGFSRFFTSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
BLAST of CMJ_chr3_015320.1 vs. ExPASy TrEMBL
Match: V4SGK0|V4SGK0_CITCL (IGR domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10002908mg PE=4 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 4.112e-72 Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 0 Query: 1 MAWRQVFNNARANSMVAASGFSRFFSSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
MAWRQ+FNNA ANSMVA SGFSRFF+SKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA
Sbjct: 1 MAWRQIFNNAGANSMVAVSGFSRFFTSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
BLAST of CMJ_chr3_015320.1 vs. ExPASy TrEMBL
Match: A0A067GPT4|A0A067GPT4_CITSI (IGR domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g033920mg PE=4 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 4.112e-72 Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 0 Query: 1 MAWRQVFNNARANSMVAASGFSRFFSSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
MAWRQ+FNNA ANSMVA SGFSRFF+SKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA
Sbjct: 1 MAWRQIFNNAGANSMVAVSGFSRFFTSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
BLAST of CMJ_chr3_015320.1 vs. ExPASy TrEMBL
Match: A0A6P5YTG6|A0A6P5YTG6_DURZI (uncharacterized protein LOC111294428 OS=Durio zibethinus OX=66656 GN=LOC111294428 PE=4 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.273e-51 Identity = 81/109 (74.31%), Postives = 90/109 (82.57%), Query Frame = 0 Query: 1 MAWRQVFNNARANSMVAASGFSRFFSSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
MAW Q+ N RA + + GFSR FS S+ +IVKVGIPEFLNG+G GVETH AKLESEIGDFQ+LLVTRTLKLKKLGIPCKHRKLILK+ HKYRLGLWRPRA P +A
Sbjct: 1 MAWMQILNKTRAFPISSPYGFSRSFSK--SSPFIVKVGIPEFLNGVGNGVETHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYAHKYRLGLWRPRAEPVEA 107
BLAST of CMJ_chr3_015320.1 vs. ExPASy TrEMBL
Match: F6I4T8|F6I4T8_VITVI (IGR domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_14s0060g00970 PE=4 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.454e-51 Identity = 83/109 (76.15%), Postives = 90/109 (82.57%), Query Frame = 0 Query: 1 MAWRQVFNNARANSMVAASGFSRFFSSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
MAWRQ+ +N S A G RFFS S YIVKVGIPEFLNGIGKGVETH AKLE+EIGDFQ+LLVTRTL+LKKLGIPCKHRKLIL+HTHKYRLGLWRPRA P K+
Sbjct: 1 MAWRQIISNRMGVSWQA--GLPRFFSK--STPYIVKVGIPEFLNGIGKGVETHVAKLETEIGDFQKLLVTRTLRLKKLGIPCKHRKLILRHTHKYRLGLWRPRAEPIKS 105
BLAST of CMJ_chr3_015320.1 vs. ExPASy TrEMBL
Match: A0A438DUS1|A0A438DUS1_VITVI (IGR domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_106659 PE=4 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.454e-51 Identity = 83/109 (76.15%), Postives = 90/109 (82.57%), Query Frame = 0 Query: 1 MAWRQVFNNARANSMVAASGFSRFFSSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
MAWRQ+ +N S A G RFFS S YIVKVGIPEFLNGIGKGVETH AKLE+EIGDFQ+LLVTRTL+LKKLGIPCKHRKLIL+HTHKYRLGLWRPRA P K+
Sbjct: 1 MAWRQIISNRMGVSWQA--GLPRFFSK--STPYIVKVGIPEFLNGIGKGVETHVAKLETEIGDFQKLLVTRTLRLKKLGIPCKHRKLILRHTHKYRLGLWRPRAEPIKS 105
BLAST of CMJ_chr3_015320.1 vs. ExPASy TrEMBL
Match: A5AME9|A5AME9_VITVI (IGR domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_026720 PE=4 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.679e-51 Identity = 83/109 (76.15%), Postives = 90/109 (82.57%), Query Frame = 0 Query: 1 MAWRQVFNNARANSMVAASGFSRFFSSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
MAWRQ+ +N S A G RFFS S YIVKVGIPEFLNGIGKGVETH AKLE+EIGDFQ+LLVTRTL+LKKLGIPCKHRKLIL+HTHKYRLGLWRPRA P K+
Sbjct: 1 MAWRQIISNRMGISWQA--GLPRFFSK--STPYIVKVGIPEFLNGIGKGVETHVAKLETEIGDFQKLLVTRTLRLKKLGIPCKHRKLILRHTHKYRLGLWRPRAEPIKS 105
BLAST of CMJ_chr3_015320.1 vs. ExPASy TrEMBL
Match: A0A6N2KD19|A0A6N2KD19_SALVM (IGR domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS64290 PE=4 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.981e-51 Identity = 81/115 (70.43%), Postives = 91/115 (79.13%), Query Frame = 0 Query: 1 MAWRQVFNNAR------ANSMVAASGFSRFFSSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
MAWRQ+ N + ++ GFSRFFS K+S +Y+VKVGIPEFLNGIGKGVE H AKLESEIGDF +LLVTRTLKLKKLGIPC+ RKLILK+ HKYRLGLWRPRA P KA
Sbjct: 3 MAWRQIITNTKRTVSIPTQQAISTPGFSRFFS-KSSPRYLVKVGIPEFLNGIGKGVEAHVAKLESEIGDFHKLLVTRTLKLKKLGIPCQQRKLILKYAHKYRLGLWRPRAEPVKA 116
BLAST of CMJ_chr3_015320.1 vs. ExPASy TrEMBL
Match: A0A6J1A729|A0A6J1A729_9ROSI (uncharacterized protein LOC110415578 OS=Herrania umbratica OX=108875 GN=LOC110415578 PE=4 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 3.812e-51 Identity = 81/109 (74.31%), Postives = 89/109 (81.65%), Query Frame = 0 Query: 1 MAWRQVFNNARANSMVAASGFSRFFSSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
MAW Q+ N RA + GFSR FS S+ ++VKVGIPEFLNG+GKGVETH AKLESEIGDFQ+LLVTRTLKLKKLGIPCKHRKLILK+ HKYRLGLWRPRA KA
Sbjct: 1 MAWVQILKNTRAIPVSNPCGFSRLFSK--SSPFVVKVGIPEFLNGVGKGVETHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYAHKYRLGLWRPRAESLKA 107
BLAST of CMJ_chr3_015320.1 vs. ExPASy TrEMBL
Match: A0A1R3KQM8|A0A1R3KQM8_9ROSI (IGR domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_05537 PE=4 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.535e-51 Identity = 82/109 (75.23%), Postives = 87/109 (79.82%), Query Frame = 0 Query: 1 MAWRQVFNNARANSMVAASGFSRFFSSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
MA Q+ N RA GFSRFFS S+ Y +KVGIPEFLNG+G GVETH AKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILK+ HKYRLGLWRPRA P KA
Sbjct: 1 MALMQILNKTRAIPFSNPYGFSRFFSK--SSPYALKVGIPEFLNGVGNGVETHVAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKYAHKYRLGLWRPRAEPVKA 107
BLAST of CMJ_chr3_015320.1 vs. Araport11
Match: AT3G05810.2 (| IGR motif protein | Chr3:1731259-1732321 REVERSE LENGTH=112 | 201606) HSP 1 Score: 142.51 bits (358), Expect = 3.092e-45 Identity = 73/113 (64.60%), Postives = 84/113 (74.34%), Query Frame = 0 Query: 1 MAWRQVFNNARANSMVAAS----GFSRFFSSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
MAW ++ +ARA A S G RF SSK + Y VKVGIPEFL GIG+G ETH AK+E+EIGD +LLVTRTL+LKKLGIPCKHRKLILK+ KYRLGLW+PRA KA
Sbjct: 1 MAWTRLIQSARAALGTAQSCSTLGLPRFHSSKPAT-YFVKVGIPEFLGGIGRGAETHIAKIETEIGDLHKLLVTRTLRLKKLGIPCKHRKLILKYGQKYRLGLWKPRADAIKA 112
BLAST of CMJ_chr3_015320.1 vs. Araport11
Match: AT3G05810.1 (| IGR motif protein | Chr3:1731259-1732321 REVERSE LENGTH=112 | 201606) HSP 1 Score: 142.51 bits (358), Expect = 3.092e-45 Identity = 73/113 (64.60%), Postives = 84/113 (74.34%), Query Frame = 0 Query: 1 MAWRQVFNNARANSMVAAS----GFSRFFSSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
MAW ++ +ARA A S G RF SSK + Y VKVGIPEFL GIG+G ETH AK+E+EIGD +LLVTRTL+LKKLGIPCKHRKLILK+ KYRLGLW+PRA KA
Sbjct: 1 MAWTRLIQSARAALGTAQSCSTLGLPRFHSSKPAT-YFVKVGIPEFLGGIGRGAETHIAKIETEIGDLHKLLVTRTLRLKKLGIPCKHRKLILKYGQKYRLGLWKPRADAIKA 112
BLAST of CMJ_chr3_015320.1 vs. Araport11
Match: AT5G26800.1 (| xaa-pro aminopeptidase P | Chr5:9425224-9426485 FORWARD LENGTH=112 | 201606) HSP 1 Score: 141.354 bits (355), Expect = 8.380e-45 Identity = 71/113 (62.83%), Postives = 87/113 (76.99%), Query Frame = 0 Query: 1 MAWRQVFNNARANSMVAASG----FSRFFSSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAPAKA 109
MAW ++ +AR+ A + F RF+S K++ Y VKVGIPEFL+GIG GVETH AKLE+E+GD +LLVTRTL+LKK GIPCKHRKLILK++HKYRLGLW+PRA KA
Sbjct: 1 MAWMRLIQSARSVLTTAPASSTLNFHRFYS-KSAAPYHVKVGIPEFLSGIGGGVETHIAKLETELGDLPKLLVTRTLRLKKFGIPCKHRKLILKYSHKYRLGLWKPRADAIKA 112 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_015320.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_015320.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_015320.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_015320.1_cmj_v1 ID=CMJ_chr3_015320.1_cmj_v1; Name=CMJ_chr3_015320.1; organism=Citrus maxima; type=mRNA; length=330bpback to top protein sequence of CMJ_chr3_015320.1_cmj_v1 >CMJ_chr3_015320.1_cmj_v1 ID=CMJ_chr3_015320.1_cmj_v1; Name=CMJ_chr3_015320.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=110bpback to top mRNA from alignment at chr3:33913869..33916351- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2483bp; location=Sequence derived from: chr3:33913869..33916351- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:33913869..33916351- >CMJ_chr3_015320.1_cmj_v1 ID=CMJ_chr3_015320.1_cmj_v1; Name=CMJ_chr3_015320.1; organism=Citrus maxima; type=CDS; length=330bp; location=Sequence derived from: chr3:33913869..33916351- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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