CMJ_chr3_017150.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_017150.1 vs. ExPASy TrEMBL
Match: A0A067GRC7|A0A067GRC7_CITSI (Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g002355mg PE=4 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 1.680e-54 Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0 Query: 1 MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTAKGTFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFKKKRK 96
MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNT KGTFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFK K++
Sbjct: 1 MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTEKGTFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFKVKKQ 96
BLAST of CMJ_chr3_017150.1 vs. ExPASy TrEMBL
Match: A0A067GNN3|A0A067GNN3_CITSI (Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g002355mg PE=4 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.431e-54 Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0 Query: 1 MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTAKGTFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFKKKRK 96
MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNT KGTFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFK K++
Sbjct: 1 MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTEKGTFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFKVKKQ 96
BLAST of CMJ_chr3_017150.1 vs. ExPASy TrEMBL
Match: A0A2H5NMR5|A0A2H5NMR5_CITUN (Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_059710 PE=4 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.438e-54 Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0 Query: 1 MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTAKGTFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFKKKRK 96
MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNT KGTFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFK K++
Sbjct: 1 MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTEKGTFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFKVKKQ 96
BLAST of CMJ_chr3_017150.1 vs. ExPASy TrEMBL
Match: V4T6G8|V4T6G8_CITCL (Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10000192mg PE=4 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 2.449e-54 Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0 Query: 1 MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTAKGTFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFKKKRK 96
MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTAKG FGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFK K++
Sbjct: 1 MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTAKGPFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFKVKKQ 96
BLAST of CMJ_chr3_017150.1 vs. ExPASy TrEMBL
Match: V4TBN8|V4TBN8_CITCL (Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10000192mg PE=4 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.066e-54 Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0 Query: 1 MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTAKGTFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFKKKRK 96
MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTAKG FGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFK K++
Sbjct: 1 MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTAKGPFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFKVKKQ 96
BLAST of CMJ_chr3_017150.1 vs. ExPASy TrEMBL
Match: A0A5C7H7W2|A0A5C7H7W2_9ROSI (Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_021824 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.865e-13 Identity = 48/85 (56.47%), Postives = 60/85 (70.59%), Query Frame = 0 Query: 12 QFPDHRGFDASASPSPAAANKQLLENHEKNTAKGTFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSGDEKFKKKRK 96
QFPD RGFDAS+S S NKQLLENHEKN+ K TF + ENDRK +++TTS KN K+SA +SD+ TS DEKF+ K++
Sbjct: 4 QFPD-RGFDASSSSS----NKQLLENHEKNSVKETFNV-ENDRKYSSSTTS------KNYKSSA----LSDILTSSDEKFQIKKQ 72
BLAST of CMJ_chr3_017150.1 vs. ExPASy TrEMBL
Match: B9GN95|B9GN95_POPTR (Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G111200 PE=4 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.581e-12 Identity = 43/100 (43.00%), Postives = 56/100 (56.00%), Query Frame = 0 Query: 1 MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTAKGTFGINENDRKSAAA---TTSTTTTTTKNLKNSAAPLSVSDLFTSG-DEKFKKKRK 96
MPHRTTYFFPRQFPD GF+AS+S +KQLL++ K K F I + RK ++ +T T+ + +SDLFTS DEK+ K K
Sbjct: 1 MPHRTTYFFPRQFPDRSGFNASSS------SKQLLDHGNKKVTKDAFNIENDLRKPSSKDLYSTVGKNTSKATATPTTITTPISDLFTSSDDEKYHLKTK 94
BLAST of CMJ_chr3_017150.1 vs. ExPASy TrEMBL
Match: A0A2C9VZ24|A0A2C9VZ24_MANES (Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_05G189700 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.541e-11 Identity = 43/96 (44.79%), Postives = 58/96 (60.42%), Query Frame = 0 Query: 1 MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTAKGTFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSG-DEKFKKKR 95
MPHRTTYFFPRQFPD G D+S+ KQLL+ +K +K TF + END ++ + T T++T + VSDLFTS DEK+ +K+
Sbjct: 1 MPHRTTYFFPRQFPDRSGLDSSS--------KQLLDQEKKKLSKDTFDV-ENDHENDSYTVGKITSSTPTTTSITP-TPVSDLFTSSDDEKYHQKK 86
BLAST of CMJ_chr3_017150.1 vs. ExPASy TrEMBL
Match: A0A2C9VXN3|A0A2C9VXN3_MANES (Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_05G189700 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.682e-11 Identity = 43/96 (44.79%), Postives = 58/96 (60.42%), Query Frame = 0 Query: 1 MPHRTTYFFPRQFPDHRGFDASASPSPAAANKQLLENHEKNTAKGTFGINENDRKSAAATTSTTTTTTKNLKNSAAPLSVSDLFTSG-DEKFKKKR 95
MPHRTTYFFPRQFPD G D+S+ KQLL+ +K +K TF + END ++ + T T++T + VSDLFTS DEK+ +K+
Sbjct: 1 MPHRTTYFFPRQFPDRSGLDSSS--------KQLLDQEKKKLSKDTFDV-ENDHENDSYTVGKITSSTPTTTSITP-TPVSDLFTSSDDEKYHQKK 86 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_017150.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 9 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_017150.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_017150.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_017150.1_cmj_v1 ID=CMJ_chr3_017150.1_cmj_v1; Name=CMJ_chr3_017150.1; organism=Citrus maxima; type=mRNA; length=312bpback to top protein sequence of CMJ_chr3_017150.1_cmj_v1 >CMJ_chr3_017150.1_cmj_v1 ID=CMJ_chr3_017150.1_cmj_v1; Name=CMJ_chr3_017150.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=104bpback to top mRNA from alignment at chr3:35098437..35098791+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=355bp; location=Sequence derived from: chr3:35098437..35098791+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:35098437..35098791+ >CMJ_chr3_017150.1_cmj_v1 ID=CMJ_chr3_017150.1_cmj_v1; Name=CMJ_chr3_017150.1; organism=Citrus maxima; type=CDS; length=312bp; location=Sequence derived from: chr3:35098437..35098791+ (Citrus maximaback to top |