CMJ_chr3_017530.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_017530.1 vs. ExPASy TrEMBL
Match: A0A067H077|A0A067H077_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g009977mg PE=4 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 3.465e-79 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 Query: 1 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG Sbjct: 1 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131 HSP 2 Score: 196.823 bits (499), Expect = 2.697e-56 Identity = 107/160 (66.88%), Postives = 118/160 (73.75%), Query Frame = 0 Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE-------------GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDELVIKESGTIQVP 224 ALE+ + E +G + T+ IL L R K E +L ++ Y+ ++ GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF LLDELVIKESGTIQVP Sbjct: 363 ALELLKEMKE-RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
BLAST of CMJ_chr3_017530.1 vs. ExPASy TrEMBL
Match: A0A2H5NMV3|A0A2H5NMV3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_060060 PE=4 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 3.652e-78 Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 0 Query: 1 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKL RYKKF+AVDAVLRQMTYETCKFHEG Sbjct: 1 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLVRYKKFQAVDAVLRQMTYETCKFHEG 131 HSP 2 Score: 192.586 bits (488), Expect = 8.412e-55 Identity = 104/160 (65.00%), Postives = 117/160 (73.12%), Query Frame = 0 Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE-------------GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDELVIKESGTIQVP 224 ALE+ + E +G + T+ IL L R + E +L ++ Y+ ++ GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVE+ICRGRKLLFAFVLLDELVI ESGT QVP Sbjct: 363 ALELLKEMKE-RGCKADIVTFNIILGGLCREGRIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEMICRGRKLLFAFVLLDELVITESGTNQVP 521
BLAST of CMJ_chr3_017530.1 vs. ExPASy TrEMBL
Match: V4TBT9|V4TBT9_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10000867mg PE=4 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 2.230e-75 Identity = 126/131 (96.18%), Postives = 128/131 (97.71%), Query Frame = 0 Query: 1 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRS+FISHGAAISLIKCEKEPQ ALEIFNTVSEQKGFNHNN TYATILDKL RYKKF+AVDAVLRQMTYETCKFHEG Sbjct: 1 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSKFISHGAAISLIKCEKEPQRALEIFNTVSEQKGFNHNNGTYATILDKLVRYKKFQAVDAVLRQMTYETCKFHEG 131 HSP 2 Score: 196.823 bits (499), Expect = 2.558e-56 Identity = 107/160 (66.88%), Postives = 118/160 (73.75%), Query Frame = 0 Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE-------------GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDELVIKESGTIQVP 224 ALE+ + E +G + T+ IL L R K E +L ++ Y+ ++ GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAF LLDELVIKESGTIQVP Sbjct: 363 ALELLKEMKE-RGCKADIVTFNIILGGLCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLDELVIKESGTIQVP 521
BLAST of CMJ_chr3_017530.1 vs. ExPASy TrEMBL
Match: A0A2I4E035|A0A2I4E035_JUGRE (pentatricopeptide repeat-containing protein At5g18475 isoform X2 OS=Juglans regia OX=51240 GN=LOC108985061 PE=4 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 7.982e-54 Identity = 96/192 (50.00%), Postives = 129/192 (67.19%), Query Frame = 0 Query: 26 WISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDELVIKE 217 WISPL + KA K DPP E+ V++ ++ ++ISH +AI+LIK E++PQ ALEIFNTV+EQKGFNHN+ATYATILDKLAR KKF AVDAVLRQMTYETCKFHEG++++A +++ M G P+ + L+ CK +A + G KP++ S++ L+ CR K+ A LL E+ KE Sbjct: 35 WISPLRLSKATLTKPDPPTESIAAMVESHRKHKYISHESAINLIKRERDPQRALEIFNTVTEQKGFNHNSATYATILDKLARSKKFPAVDAVLRQMTYETCKFHEGKVDRAKKMMEFMRKNGCNPNVFNYSTLMNGFCKEKKLLEAKEVFDEMKSFGLKPDTISYSTLINCFCRAGKIDEATELLKEMKEKE 226 HSP 2 Score: 137.117 bits (344), Expect = 7.795e-35 Identity = 73/137 (53.28%), Postives = 90/137 (65.69%), Query Frame = 0 Query: 94 NNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHE-------------GELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDELVIKE 217 + T+ IL L R +FE +L ++ + ++ GEL KA ELL LML RGFLPHYATSNELLVRLCKAGM +DAA+A+F L+EMGFKPE DSWA +ELIC+ RKLL F LLDEL ++E Sbjct: 230 DTVTFNVILGGLCREGRFETALDMLEKLPCDGVYLNKASYRIVLNFLCQKGELNKATELLDLMLGRGFLPHYATSNELLVRLCKAGMVDDAAVAMFELMEMGFKPEPDSWAHALELICKERKLLCTFELLDELTVRE 366
BLAST of CMJ_chr3_017530.1 vs. ExPASy TrEMBL
Match: A0A1U8NYB6|A0A1U8NYB6_GOSHI (pentatricopeptide repeat-containing protein At5g18475-like isoform X4 OS=Gossypium hirsutum OX=3635 GN=LOC107953223 PE=4 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.398e-53 Identity = 102/233 (43.78%), Postives = 142/233 (60.94%), Query Frame = 0 Query: 1 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG------ELEKAIELLRLMLCR--------------GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDEL 213 MN VR S C+ FS+SSS LPWISPL+++K N+ K DPP + S +++++ +FISH AI+LIK EK+PQ AL+IFN VS QKGF HN+ATY TIL KLA+ KKF+AVD++LRQM+YETC+FHEG L++AIEL M+ + G P+ + L+ LCK G E+A + G KP++ + L+ +CR ++ LL E+ Sbjct: 1 MNLVRVSF---CKQRCFSSSSSPLPWISPLQLLKPNSQKPDPPPQPSLASTESQRKPKFISHDTAINLIKREKDPQRALQIFNKVSRQKGFTHNSATYGTILHKLAQSKKFQAVDSLLRQMSYETCRFHEGGLCESRRLKEAIELFEEMVGKVDRARKIIEFMKNNGCSPNLFNYSALMNGLCKEGSWEEAKQLFVEMKSTGLKPDTIVYTTLMNCLCRASRIDEVMPLLKEM 230 HSP 2 Score: 121.709 bits (304), Expect = 6.535e-29 Identity = 65/134 (48.51%), Postives = 81/134 (60.45%), Query Frame = 0 Query: 97 TYATILDKLARYKKFEAVDAVLRQMTYE-------------TCKFHEGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDELVIKE 217 T +L L R +F +L ++ YE + + E+EKA +LL LML RG PHYATSNE+L++LCKAGM +DA ALFGL E GFKPE W L+E+ C+ RKLL F LLDELVIKE Sbjct: 241 TLNVLLGGLCRESRFHEALQMLEKLPYEGVYLNKASYRIVLNALWQKDEMEKAAKLLGLMLDRGVFPHYATSNEVLIQLCKAGMLDDAVTALFGLAETGFKPEPHCWEFLIEMNCKDRKLLPVFELLDELVIKE 374
BLAST of CMJ_chr3_017530.1 vs. ExPASy TrEMBL
Match: A0A1U8NYJ6|A0A1U8NYJ6_GOSHI (pentatricopeptide repeat-containing protein At5g18475-like isoform X3 OS=Gossypium hirsutum OX=3635 GN=LOC107953223 PE=4 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 3.505e-50 Identity = 96/206 (46.60%), Postives = 134/206 (65.05%), Query Frame = 0 Query: 1 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG------ELEKAIELLRLMLCRG-FLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICR 199 MN VR S C+ FS+SSS LPWISPL+++K N+ K DPP + S +++++ +FISH AI+LIK EK+PQ AL+IFN VS QKGF HN+ATY TIL KLA+ KKF+AVD++LRQM+YETC+FHEG L++AIEL M+ + LP T N L+ C+ G + A + + G P +++ L+ +C+ Sbjct: 1 MNLVRVSF---CKQRCFSSSSSPLPWISPLQLLKPNSQKPDPPPQPSLASTESQRKPKFISHDTAINLIKREKDPQRALQIFNKVSRQKGFTHNSATYGTILHKLAQSKKFQAVDSLLRQMSYETCRFHEGGLCESRRLKEAIELFEEMVGKDQILPDALTYNLLINGFCREGKVDRARKIIEFMKNNGCSPNLFNYSALMNGLCK 203 HSP 2 Score: 121.324 bits (303), Expect = 1.194e-28 Identity = 65/134 (48.51%), Postives = 81/134 (60.45%), Query Frame = 0 Query: 97 TYATILDKLARYKKFEAVDAVLRQMTYE-------------TCKFHEGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDELVIKE 217 T +L L R +F +L ++ YE + + E+EKA +LL LML RG PHYATSNE+L++LCKAGM +DA ALFGL E GFKPE W L+E+ C+ RKLL F LLDELVIKE Sbjct: 263 TLNVLLGGLCRESRFHEALQMLEKLPYEGVYLNKASYRIVLNALWQKDEMEKAAKLLGLMLDRGVFPHYATSNEVLIQLCKAGMLDDAVTALFGLAETGFKPEPHCWEFLIEMNCKDRKLLPVFELLDELVIKE 396
BLAST of CMJ_chr3_017530.1 vs. ExPASy TrEMBL
Match: A0A6P4LFK1|A0A6P4LFK1_GOSAR (pentatricopeptide repeat-containing protein At5g18475 isoform X3 OS=Gossypium arboreum OX=29729 GN=LOC108450354 PE=4 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.319e-50 Identity = 104/255 (40.78%), Postives = 144/255 (56.47%), Query Frame = 0 Query: 1 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG------ELEKAIELLRLML-------------------CR-----------------GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDEL 213 MN VR S C+ FS+SSS LPWISPL+++K N+ K DPP + S +++++ +FISH AI+LIK EK+PQ AL+IFN VS QKGF HN+ATY TIL KLA+ KKF+AVD++LRQM+YETC+FHEG L++AIEL ++ CR G P+ + L+ LCK G E+A + G KP++ + L+ +CR ++ A LL E+ Sbjct: 1 MNLVRVSF---CKQRCFSSSSSPLPWISPLQLLKPNSQKPDPPPQPSLASTESQRKPKFISHDTAINLIKREKDPQRALQIFNKVSRQKGFTHNSATYGTILHKLAQSKKFQAVDSLLRQMSYETCRFHEGGLCESRRLKEAIELFEEIVGKDQILPDALTYNLLINGFCREGKVDRARKIIEFMKNNGCSPNLFNYSALMNGLCKEGSWEEAKQLFVEMKSTGLKPDTIVYTTLMNCLCRASRIDEAMPLLKEM 252 HSP 2 Score: 122.094 bits (305), Expect = 5.858e-29 Identity = 71/166 (42.77%), Postives = 92/166 (55.42%), Query Frame = 0 Query: 65 AISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYE-------------TCKFHEGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDELVIKE 217 A+ L+K KE +C ++ T +L L R +F +L ++ YE + + E+EKA +LL LML RG PHYATSNE+L++LCKAGM +DA ALFGL E GFKPE W L+E+ C+ RKLL F LLDELVIKE Sbjct: 245 AMPLLKEMKENKCEADV--------------VTLNVLLGGLCRESRFHEALQMLEKLPYEGVYLNKASYRIVLNALWQKDEMEKAAKLLGLMLDRGVFPHYATSNEVLIQLCKAGMLDDAVTALFGLAETGFKPEPHCWEFLIEMNCKDRKLLPVFELLDELVIKE 396
BLAST of CMJ_chr3_017530.1 vs. ExPASy TrEMBL
Match: A0A0D2N910|A0A0D2N910_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G131400 PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 9.158e-50 Identity = 105/255 (41.18%), Postives = 143/255 (56.08%), Query Frame = 0 Query: 1 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG------ELEKAIELLRLML-------------------CR-----------------GFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDEL 213 MN VR S C+ FS+SSS LPWISPL+++K N K DPP + S +++++ +FISH AI+LIK EK+PQ AL+IFN VS QKGF HN+ATY TIL KLA+ KKF+AVD++LRQM+YETC+FHEG L++AIEL M+ CR G P+ + L+ LCK G E+A + G KP++ + L+ +CR ++ A LL E+ Sbjct: 1 MNLVRVSF---CKQRCFSSSSSPLPWISPLQLLKPNFQKPDPPPQPSLASTESQRKPKFISHETAINLIKREKDPQRALQIFNKVSRQKGFTHNSATYGTILHKLAQSKKFQAVDSLLRQMSYETCRFHEGGLCESRRLKEAIELFEEMVGKDQILPDALTYNLLINGFCREGKVDRARKIIEFMKNNGCSPNLFNYSALMNGLCKEGSWEEAKQLFVEMKSTGLKPDTIVYTTLMNCLCRASRIDEAMSLLKEM 252 HSP 2 Score: 130.183 bits (326), Expect = 6.670e-32 Identity = 75/166 (45.18%), Postives = 95/166 (57.23%), Query Frame = 0 Query: 65 AISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG-------------ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDELVIKE 217 A+SL+K KE +C ++ T +L L R +F V +L ++ YE ++ E+EKA +LL LML RGF PHYATSNE+L++LCKAGM +DA ALFGL E GFKPE W L+E+ CR RKLL F LLDELVIKE Sbjct: 245 AMSLLKEMKENKCEADV--------------VTLNVLLGGLCRESRFHEVLQMLEKLPYEGVYLNKASYRIVLNALCQKDEMEKAAKLLGLMLDRGFFPHYATSNEVLIQLCKAGMVDDAVTALFGLAETGFKPEPHCWEFLIEMNCRDRKLLPVFELLDELVIKE 396
BLAST of CMJ_chr3_017530.1 vs. ExPASy TrEMBL
Match: A0A6A2YPF9|A0A6A2YPF9_HIBSY (Putative Nuclear factor Y OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111332pilonHSYRG00053 PE=4 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.988e-49 Identity = 86/131 (65.65%), Postives = 107/131 (81.68%), Query Frame = 0 Query: 1 MNSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131 MNS R S K C FSS STSSSSLPWISPL+ +KA + KADPP+E S ++++++ +FISH AI+LIK EK+PQ ALEIFN VSEQKGF+HN+ATY TIL KLA+ KKF+A+D++LRQM YETC+FHEG Sbjct: 1 MNSARVSFHKLCYFSS-STSSSSLPWISPLQFVKAKSRKADPPLEMSHATMESQRKPKFISHETAINLIKREKDPQRALEIFNRVSEQKGFSHNSATYGTILHKLAQSKKFQAIDSLLRQMIYETCRFHEG 130
BLAST of CMJ_chr3_017530.1 vs. ExPASy TrEMBL
Match: A0A4S4E4P0|A0A4S4E4P0_CAMSI (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_003262 PE=4 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 6.230e-46 Identity = 75/112 (66.96%), Postives = 95/112 (84.82%), Query Frame = 0 Query: 20 SSSSLPWISPLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG 131 +SSS+PWISPL+ +K +PK D P ET + V+AR++ +FISH +A++LIK E++PQ ALEIFN VS+Q+GFNHNNATYATILDKLAR KKF+AVDA+L QM YETC+FHEG Sbjct: 2 ASSSIPWISPLQFLKTTSPKPDLPTETMTSLVEARRKPKFISHESAVNLIKRERDPQHALEIFNKVSDQRGFNHNNATYATILDKLARSKKFQAVDAILHQMKYETCRFHEG 113 HSP 2 Score: 139.813 bits (351), Expect = 5.023e-35 Identity = 79/154 (51.30%), Postives = 99/154 (64.29%), Query Frame = 0 Query: 78 ALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH-------------EGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDELVIKES 218 A+E+ + E K + T+ ++ L R +FE +L ++ E + EGEL KA+ELL LML RGF+PH+ATSNELLVRLC+AG DAA+ LFGLVEMGFKPE DSW+LLV+LICR RKLL AF LLDELV+ E Sbjct: 345 AMELLKEMKE-KECRADTVTFNVVIGGLCRQGRFEEALRMLYKLPNECVYLNKASYRIVLNFLCKEGELGKAVELLCLMLSRGFVPHFATSNELLVRLCEAGKVADAAMVLFGLVEMGFKPEPDSWSLLVDLICRERKLLPAFELLDELVLVEQ 497
BLAST of CMJ_chr3_017530.1 vs. ExPASy Swiss-Prot
Match: PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX=3702 GN=At5g18475 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 4.465e-30 Identity = 68/186 (36.56%), Postives = 109/186 (58.60%), Query Frame = 0 Query: 51 VDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGEL-------------EKAIELLRLML----CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDELVIKESG 219 V+ +++FISH +A+SL+K E++PQ L+IFN S+QKGFNHNNATY+ +LD L R+KKF AVDA+L QM YETC+F E +K +E+ L+ + L +T LL+ + ++ + L+ +G +P + + +LV+ C+ + FAF++++E+ K SG Sbjct: 45 VETNPKTKFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSR--KLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEM--KRSG 226 HSP 2 Score: 87.0409 bits (214), Expect = 1.267e-18 Identity = 51/131 (38.93%), Postives = 68/131 (51.91%), Query Frame = 0 Query: 97 TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG-------------ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDELV 214 TY IL L+ + E +L Q E ++G ELEKA++ L +M RG PH+AT NEL+VRLC++G E L G + +G P SW +VE IC+ RKL+ F LLD LV Sbjct: 375 TYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
BLAST of CMJ_chr3_017530.1 vs. ExPASy Swiss-Prot
Match: PP120_ARATH (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.230e-11 Identity = 42/162 (25.93%), Postives = 81/162 (50.00%), Query Frame = 0 Query: 67 SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH---------------EGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDEL 213 ++IKC+K+P ALE+FN++ ++ GF H +TY ++++KL Y KFEA++ VL M E H +G++++A+ + M P + N ++ L +G + A + + G P+ S+ + ++ C+ + A LL+ + Sbjct: 12 AVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR-ENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
BLAST of CMJ_chr3_017530.1 vs. Araport11
Match: AT5G18475.1 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr5:6129255-6130775 REVERSE LENGTH=506 | 201606) HSP 1 Score: 119.398 bits (298), Expect = 4.568e-31 Identity = 68/186 (36.56%), Postives = 109/186 (58.60%), Query Frame = 0 Query: 51 VDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGEL-------------EKAIELLRLML----CRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDELVIKESG 219 V+ +++FISH +A+SL+K E++PQ L+IFN S+QKGFNHNNATY+ +LD L R+KKF AVDA+L QM YETC+F E +K +E+ L+ + L +T LL+ + ++ + L+ +G +P + + +LV+ C+ + FAF++++E+ K SG Sbjct: 45 VETNPKTKFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSR--KLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEM--KRSG 226 HSP 2 Score: 87.0409 bits (214), Expect = 1.296e-19 Identity = 51/131 (38.93%), Postives = 68/131 (51.91%), Query Frame = 0 Query: 97 TYATILDKLARYKKFEAVDAVLRQMTYETCKFHEG-------------ELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDELV 214 TY IL L+ + E +L Q E ++G ELEKA++ L +M RG PH+AT NEL+VRLC++G E L G + +G P SW +VE IC+ RKL+ F LLD LV Sbjct: 375 TYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
BLAST of CMJ_chr3_017530.1 vs. Araport11
Match: AT1G74580.3 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr1:28020777-28023068 FORWARD LENGTH=763 | 201606) HSP 1 Score: 66.2402 bits (160), Expect = 2.281e-12 Identity = 42/162 (25.93%), Postives = 81/162 (50.00%), Query Frame = 0 Query: 67 SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH---------------EGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDEL 213 ++IKC+K+P ALE+FN++ ++ GF H +TY ++++KL Y KFEA++ VL M E H +G++++A+ + M P + N ++ L +G + A + + G P+ S+ + ++ C+ + A LL+ + Sbjct: 12 AVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR-ENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
BLAST of CMJ_chr3_017530.1 vs. Araport11
Match: AT1G74580.2 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr1:28020777-28023068 FORWARD LENGTH=763 | 201606) HSP 1 Score: 66.2402 bits (160), Expect = 2.281e-12 Identity = 42/162 (25.93%), Postives = 81/162 (50.00%), Query Frame = 0 Query: 67 SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH---------------EGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDEL 213 ++IKC+K+P ALE+FN++ ++ GF H +TY ++++KL Y KFEA++ VL M E H +G++++A+ + M P + N ++ L +G + A + + G P+ S+ + ++ C+ + A LL+ + Sbjct: 12 AVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR-ENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
BLAST of CMJ_chr3_017530.1 vs. Araport11
Match: AT1G74580.1 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr1:28020777-28023068 FORWARD LENGTH=763 | 201606) HSP 1 Score: 66.2402 bits (160), Expect = 2.281e-12 Identity = 42/162 (25.93%), Postives = 81/162 (50.00%), Query Frame = 0 Query: 67 SLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFH---------------EGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDEL 213 ++IKC+K+P ALE+FN++ ++ GF H +TY ++++KL Y KFEA++ VL M E H +G++++A+ + M P + N ++ L +G + A + + G P+ S+ + ++ C+ + A LL+ + Sbjct: 12 AVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR-ENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
BLAST of CMJ_chr3_017530.1 vs. Araport11
Match: AT1G12620.1 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr1:4294883-4296748 REVERSE LENGTH=621 | 201606) HSP 1 Score: 60.4622 bits (145), Expect = 1.685e-10 Identity = 57/228 (25.00%), Postives = 104/228 (45.61%), Query Frame = 0 Query: 2 NSVRFSLRKCCRFSSFSTSSSSLPWISPLEVIKANTP--KADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQKGFNHNNATYATILDKLARYKK----FEAVDAVLRQMTYE--TCKFH--------EGELEKAIELLRLMLCRGFLPHYATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFVLLDEL 213 ++R +L C FS+ S +S E +++ K D V+ +R R R I S++ K+ L++ + E KG HN T + +++ R +K F A+ +++ + YE T F EG + +A+EL+ M+ G P T N L+ LC G DA + + +VE GF+P ++ +++++C+ + A LL ++ Sbjct: 13 GTLRTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM-ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIK-LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_017530.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_017530.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 2 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_017530.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_017530.1_cmj_v1 ID=CMJ_chr3_017530.1_cmj_v1; Name=CMJ_chr3_017530.1; organism=Citrus maxima; type=mRNA; length=675bpback to top protein sequence of CMJ_chr3_017530.1_cmj_v1 >CMJ_chr3_017530.1_cmj_v1 ID=CMJ_chr3_017530.1_cmj_v1; Name=CMJ_chr3_017530.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=225bpback to top mRNA from alignment at chr3:35387119..35389369- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2251bp; location=Sequence derived from: chr3:35387119..35389369- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:35387119..35389369- >CMJ_chr3_017530.1_cmj_v1 ID=CMJ_chr3_017530.1_cmj_v1; Name=CMJ_chr3_017530.1; organism=Citrus maxima; type=CDS; length=675bp; location=Sequence derived from: chr3:35387119..35389369- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|