CMJ_chr3_017960.3
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_017960.3 vs. ExPASy TrEMBL
Match: A0A067H019|A0A067H019_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g021890mg PE=4 SV=1) HSP 1 Score: 553.132 bits (1424), Expect = 0.000e+0 Identity = 267/274 (97.45%), Postives = 268/274 (97.81%), Query Frame = 0 Query: 1 MSLLRLYCCFPSTSYLYTEPQQQQSHGAPFVSLPQKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVDYSSAAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMCLVIALSYLYL 274
MSLLRLYCCFPSTSYLYTEPQQQQSH APFVSL QKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVD SSAAA NTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAK+KKKNP PPVQPKPF TFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMCLVIALSYLYL
Sbjct: 1 MSLLRLYCCFPSTSYLYTEPQQQQSHEAPFVSLLQKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVDSSSAAAVNTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKIKKKNPFPPVQPKPFATFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMCLVIALSYLYL 274
BLAST of CMJ_chr3_017960.3 vs. ExPASy TrEMBL
Match: V4TC07|V4TC07_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001605mg PE=4 SV=1) HSP 1 Score: 551.206 bits (1419), Expect = 0.000e+0 Identity = 265/274 (96.72%), Postives = 267/274 (97.45%), Query Frame = 0 Query: 1 MSLLRLYCCFPSTSYLYTEPQQQQSHGAPFVSLPQKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVDYSSAAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMCLVIALSYLYL 274
MSLLRLYCCFPSTSYLYTEPQQQQSH APFVSL QKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVD SSAAA NTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLD+ELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAK+KKKNP PPVQPKPF TFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAE AISAFQGKVIMCLVIALSYLYL
Sbjct: 58 MSLLRLYCCFPSTSYLYTEPQQQQSHEAPFVSLLQKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVDSSSAAAVNTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDVELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKIKKKNPFPPVQPKPFATFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAEAAISAFQGKVIMCLVIALSYLYL 331
BLAST of CMJ_chr3_017960.3 vs. ExPASy TrEMBL
Match: A0A2H5NNP3|A0A2H5NNP3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_060370 PE=4 SV=1) HSP 1 Score: 532.717 bits (1371), Expect = 0.000e+0 Identity = 256/263 (97.34%), Postives = 257/263 (97.72%), Query Frame = 0 Query: 1 MSLLRLYCCFPSTSYLYTEPQQQQSHGAPFVSLPQKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVDYSSAAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIM 263
MSLLRLYCCFPSTSYLYTEPQQQQSHGAPFVSL QKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVD SSAAA NTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFV MGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNP PPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGK+ M
Sbjct: 58 MSLLRLYCCFPSTSYLYTEPQQQQSHGAPFVSLLQKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVDSSSAAAVNTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVMMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPFPPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKLFM 320
BLAST of CMJ_chr3_017960.3 vs. ExPASy TrEMBL
Match: A0A067H0G6|A0A067H0G6_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g021890mg PE=4 SV=1) HSP 1 Score: 527.709 bits (1358), Expect = 0.000e+0 Identity = 254/263 (96.58%), Postives = 256/263 (97.34%), Query Frame = 0 Query: 1 MSLLRLYCCFPSTSYLYTEPQQQQSHGAPFVSLPQKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVDYSSAAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIM 263
MSLLRLYCCFPSTSYLYTEPQQQQSH APFVSL QKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVD SSAAA NTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAK+KKKNP PPVQPKPF TFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGK+ M
Sbjct: 1 MSLLRLYCCFPSTSYLYTEPQQQQSHEAPFVSLLQKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVDSSSAAAVNTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKIKKKNPFPPVQPKPFATFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKLFM 263
BLAST of CMJ_chr3_017960.3 vs. ExPASy TrEMBL
Match: V4T6V2|V4T6V2_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001605mg PE=4 SV=1) HSP 1 Score: 525.783 bits (1353), Expect = 0.000e+0 Identity = 252/263 (95.82%), Postives = 255/263 (96.96%), Query Frame = 0 Query: 1 MSLLRLYCCFPSTSYLYTEPQQQQSHGAPFVSLPQKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVDYSSAAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIM 263
MSLLRLYCCFPSTSYLYTEPQQQQSH APFVSL QKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVD SSAAA NTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLD+ELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAK+KKKNP PPVQPKPF TFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAE AISAFQGK+ M
Sbjct: 58 MSLLRLYCCFPSTSYLYTEPQQQQSHEAPFVSLLQKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVDSSSAAAVNTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDVELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKIKKKNPFPPVQPKPFATFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAEAAISAFQGKLFM 320
BLAST of CMJ_chr3_017960.3 vs. ExPASy TrEMBL
Match: A0A5C7GTN5|A0A5C7GTN5_9ROSI (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027438 PE=4 SV=1) HSP 1 Score: 338.191 bits (866), Expect = 1.968e-113 Identity = 183/266 (68.80%), Postives = 214/266 (80.45%), Query Frame = 0 Query: 1 MSLLRLYCCFPSTSYLYTEPQQQQSHGAPFVSLPQKQQKQHYNYFFPLSSSPFHAYTFPITPKKVSPFVFHFSATT-QDPFVDYSSAA-AANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNP-APPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIM 263
M+LLRL CFPS +YL TE +Q H +P +S K Q Q N LS S ++TFPI PK+ F+FH SA T Q+P VD SS+ ANTEQ EE SK RL+AQNVPWTST EDIRALFE+HGTVLD+ELSMH+K RNRGLAFVTMGSP+EA AALNNLESYEFEGRTLKVNYAK KKKNP APPV+PKP TFNLF+ANLSFEARAKD++EFFISEG+++ SAEV+FH+NPRRS+GYGFVSFK+KK A+ A+SAF+GK+ M
Sbjct: 3 MALLRL-NCFPSNTYLSTE--KQHLHLSPVLSF-HKPQNQQNNNNLSLSWSFSRSHTFPIKPKRPGHFIFHVSAVTAQNPVVDSSSSTETANTEQNEE-LSKDRLIAQNVPWTSTAEDIRALFEKHGTVLDVELSMHNKTRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKVNYAKPKKKNPAAPPVRPKPI-TFNLFVANLSFEARAKDIKEFFISEGYNIYSAEVVFHNNPRRSSGYGFVSFKTKKEADAALSAFEGKMFM 262
BLAST of CMJ_chr3_017960.3 vs. ExPASy TrEMBL
Match: A0A6P6ANF6|A0A6P6ANF6_DURZI (28 kDa ribonucleoprotein, chloroplastic-like OS=Durio zibethinus OX=66656 GN=LOC111311294 PE=4 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 1.234e-96 Identity = 149/246 (60.57%), Postives = 184/246 (74.80%), Query Frame = 0 Query: 26 HGAPFVSLPQKQQKQ--HYNYFFPLSSSPFHAYTFPIT------PKKVSPFVFHFSATTQDPFVDYSSAAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIM 263
H + SL K Q Q ++NY +SS F P+T + S F+ HFS TQDP ++ +Q++EE+SKTRL+AQNVPW T EDIR+LFE+HGTV+D+ELSMH+K RNRGLAFV+M SP+EA AALNNLESYE EGRTL++NYAK +KK APP +PKP P FNLF+ANLS+EARAK L+EFF SEG +VVSAEVIFH+NPR+S+GYGFVSFKSKK A+ A+SAFQGK+ M
Sbjct: 8 HQSSLFSLQHKPQTQCNNFNYIQNISSICFLPPLSPLTNTLRLKATRFSSFILHFSTATQDPALNVKE------QQQQEEFSKTRLIAQNVPWNCTTEDIRSLFEKHGTVVDVELSMHNKIRNRGLAFVSMASPEEALAALNNLESYELEGRTLRLNYAKPRKKKAAPPEKPKPVPAFNLFVANLSYEARAKHLKEFFSSEGANVVSAEVIFHENPRKSSGYGFVSFKSKKEADAAMSAFQGKMFM 247
BLAST of CMJ_chr3_017960.3 vs. ExPASy TrEMBL
Match: A0A6A2ZFR7|A0A6A2ZFR7_HIBSY (Metallophosphoesterase 1-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110895pilonHSYRG00270 PE=4 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 4.210e-92 Identity = 142/219 (64.84%), Postives = 170/219 (77.63%), Query Frame = 0 Query: 45 FFPLSSSPFHAYTFPITPKKVSPFVFHFSATTQDPFVDYSSAAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIM 263
F PLS++ F TP + FV HFSATTQ P A ++ EEE+SKTRL+AQNVPW+ T EDIR+LFE+HGTV+D+ELSMH+K RNRGLAFV+M SP+EA ALNNLESYEFEGRTL++NYAK K+K PP +PK P FNLF+ANLS+E RAK L+E F SEG +VVSAEVIFHDNPR+S+GYGFVSFKSKK A+ A+SAFQGK+ M
Sbjct: 35 FSPLSTT----LRFKATP--FTSFVLHFSATTQHP--------ALQVKEEEEEFSKTRLIAQNVPWSCTVEDIRSLFEKHGTVVDVELSMHNKTRNRGLAFVSMASPEEALVALNNLESYEFEGRTLRLNYAKPKQKKALPPEKPKQVPAFNLFVANLSYEVRAKHLKELFSSEGANVVSAEVIFHDNPRKSSGYGFVSFKSKKEADAALSAFQGKMFM 239
BLAST of CMJ_chr3_017960.3 vs. ExPASy TrEMBL
Match: A0A2I4GQJ7|A0A2I4GQJ7_JUGRE (28 kDa ribonucleoprotein, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109009951 PE=4 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 6.892e-92 Identity = 148/234 (63.25%), Postives = 182/234 (77.78%), Query Frame = 0 Query: 47 PLSS-SPFHAYTFPITPKKVSPFVFHFSATTQDPFVDYSSAAAANTEQR-EEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKK--NPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMC--LVIALSYLYL 274
PLS SP H +T K+V FV +FS+T Q+ +D SA + ++E EE+S+TRL+AQNVPWT T EDIRALFE+HGTVLD+ELSMH+K +NRGLAFVTMGSP+EA ALNNL SYE EGRT+KVNYAK +KK +P+PPVQP P TFNLF+ANL FEAR+KDLREFF G DVVSA+VIFHD+PR+S+GYGFV+FKSKK A+ A+ AFQGK+ M + +A S Y+
Sbjct: 42 PLSHPSPAHTHTLSAKAKRVRNFVLYFSSTAQEQALDSVSAQSDDSEPAPTEEFSRTRLIAQNVPWTCTVEDIRALFEKHGTVLDVELSMHNKTKNRGLAFVTMGSPEEARMALNNLVSYELEGRTIKVNYAKARKKRPSPSPPVQPNPV-TFNLFVANLPFEARSKDLREFFSGSG-DVVSAQVIFHDSPRKSSGYGFVAFKSKKDADEALPAFQGKMFMGRPIRVARSRQYV 273
BLAST of CMJ_chr3_017960.3 vs. ExPASy TrEMBL
Match: A0A218X8Y3|A0A218X8Y3_PUNGR (28 kDa ribonucleoprotein, chloroplastic OS=Punica granatum OX=22663 GN=LOC116193050 PE=4 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 9.057e-92 Identity = 146/244 (59.84%), Postives = 174/244 (71.31%), Query Frame = 0 Query: 30 FVSLPQKQQKQHYNYFFPLSSSPFHAYTFPITPKK---VSPFVFHFSATTQDPFVDYSSAAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMCLVIALS 270
F S P Q Y PLSS PF + + P+ +PF FSA + A N+E+ EE SKTRL+AQNVPW+ T EDIR+LFE+HGTV+D+ELSM++K RNRGLAFV M SP+EA ALNNLES E+EGRTL++NYA +KK P+PP QP+P PTFNLF+ANLS+EARAKDLREFF S V SAEVIFHDNPRRS+GYGFVSFK KK AE+AISAFQGK M I ++
Sbjct: 18 FSSTPLTSSSQSLVYL-PLSSPPFSCLSHTLNPRARRPTNPFSCSFSAVAVETSELELDAKQENSEE-AEEVSKTRLIAQNVPWSCTAEDIRSLFEKHGTVVDVELSMYNKTRNRGLAFVEMASPEEALRALNNLESSEYEGRTLRLNYANPRKKKPSPPAQPRPIPTFNLFVANLSYEARAKDLREFFDSGSGTVASAEVIFHDNPRRSSGYGFVSFKYKKAAESAISAFQGKEFMGRPIRIA 259
BLAST of CMJ_chr3_017960.3 vs. ExPASy Swiss-Prot
Match: ROC3_NICSY (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.606e-20 Identity = 58/187 (31.02%), Postives = 93/187 (49.73%), Query Frame = 0 Query: 86 AAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSK-NRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPF-PTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMCLVIALS 270
A TE+ +E +L N+P+ E + LF+Q G V E+ + + +R+RG FVTM + +EA A+ Y+ GR L VN K + P P+ F PT+ +++ N+ ++ L + F SE VVSA V+F RS G+GFV+ S+ AI+ G+ + I ++
Sbjct: 82 GEAGETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVN--KAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVF-SEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVN 265
BLAST of CMJ_chr3_017960.3 vs. ExPASy Swiss-Prot
Match: CP33_ARATH (RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.815e-19 Identity = 52/168 (30.95%), Postives = 94/168 (55.95%), Query Frame = 0 Query: 102 RLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSK--NRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPT--------FNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQG 259
RL N+P+T T ++ +F + GTV+D+++ ++ K +R+RG FVTMGS +EA A+ S + GRT+KVN+ +V + ++ K ++ NL + ++ L++ F + V+ A+VI+ N RS G+GF+SF+S + ++A++ G
Sbjct: 117 RLYVGNLPYTITSSELSQIFGEAGTVVDVQI-VYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAF-GDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNG 282
BLAST of CMJ_chr3_017960.3 vs. ExPASy Swiss-Prot
Match: ROC5_NICSY (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.547e-19 Identity = 53/163 (32.52%), Postives = 92/163 (56.44%), Query Frame = 0 Query: 102 RLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHS-KNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPTF--------NLFIANLSFEARAKDLREFFISE-GWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAI 254
RL N+P++ T + +F + GTV ++E+ +R+RG AFVTMGS +EA A+ + + GRT+KVN+ +V + + K T+ L++ANLS+ ++ LR+ F + G+ +SA+VI+ + RS G+GF++F S + +A+
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGF--MSAKVIYDRSSGRSRGFGFITFSSAEAMNSAL 275
BLAST of CMJ_chr3_017960.3 vs. ExPASy Swiss-Prot
Match: CP31A_ARATH (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.068e-16 Identity = 58/188 (30.85%), Postives = 89/188 (47.34%), Query Frame = 0 Query: 82 DYSSAAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSK-NRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPF-PTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMCLVI 267
D S A + + E + +L N+ + + + LFEQ GTV E+ + + +++RG FVTM S DEA A+ Y+ GR L VN K + P P+ + P F +++ NL ++ L + F SE VV A V++ RS G+GFV+ AISA G+ + I
Sbjct: 131 DVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN--KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLF-SEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAI 315
BLAST of CMJ_chr3_017960.3 vs. ExPASy Swiss-Prot
Match: CP31B_ARATH (RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31B PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.454e-16 Identity = 71/253 (28.06%), Postives = 114/253 (45.06%), Query Frame = 0 Query: 40 QHYNYFFPLSSSPFHAYTFPITPKKV---SPFVFHFSATT--------QDPFVDYSSAAAANTEQREEEYS------KTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRN----RGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPF-PTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMCLVIALS 270
+ + + F LSS P + T + K + SP V S T+ +D + +S + + E+ + +L N+P+ + + LFEQ GTV E+S NR+ RG FVTM + +EA A+ S+E GR L VN A + P QP+ + F +++ NL ++ + L F SE VV A V+ RS G+GFV ++ AI+A G+ + I ++
Sbjct: 36 ESHRFNFSLSSRPVN-LTLSLKSKTLRNSSPVVTFVSQTSNWAEEEEGEDGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQALAMLFEQAGTV---EISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRA--APRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLF-SEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVN 281
BLAST of CMJ_chr3_017960.3 vs. ExPASy Swiss-Prot
Match: ROC4_NICSY (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 6.021e-16 Identity = 51/164 (31.10%), Postives = 87/164 (53.05%), Query Frame = 0 Query: 102 RLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKN--RNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFP-TFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVI 262
+L N+P+ E + LFEQ G V++I +++++ ++RG FVTM + +EA A+ Y+ GR L VN A + + P P P+ F ++ +++ N+ + L + F SE VVSA V++ RS G+GFV+ S+ AI+ G+ +
Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQAG-VVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERP--PRTFEQSYRIYVGNIPWGIDDARLEQLF-SEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSL 296
BLAST of CMJ_chr3_017960.3 vs. ExPASy Swiss-Prot
Match: ROC1_SPIOL (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.036e-15 Identity = 51/166 (30.72%), Postives = 85/166 (51.20%), Query Frame = 0 Query: 100 KTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSK-NRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPF--PTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVI 262
+ +L N+P+ E + +F+ G V E+ + + +R+RG FVTM + +EA A+ L Y+ +GR L VN A + +P P+ P+ +++ NL ++ L + F SE VVSA V+ RS G+GFV+ S+ AI+A G+ +
Sbjct: 54 EAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRG---SPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLF-SEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTL 215
BLAST of CMJ_chr3_017960.3 vs. ExPASy Swiss-Prot
Match: RRP2_SPIOL (30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP2 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 8.243e-15 Identity = 52/175 (29.71%), Postives = 85/175 (48.57%), Query Frame = 0 Query: 102 RLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSK--NRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPT------------FNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVI 262
RL N+P ++++R + E+HG + +I M+ K R+R FVTM + ++A A + L E GR +KVN + P++ T + ++I NL+ + L++FF SE V+ A+V +S G+GFVSF S++ E AI A V+
Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAI-EIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITE-------KPLEGMDIATTQAEDSQFVESPYKVYIGNLAKTVTNELLKDFF-SEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVL 250
BLAST of CMJ_chr3_017960.3 vs. ExPASy Swiss-Prot
Match: PSRP2_ARATH (30S ribosomal protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSRP2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.257e-14 Identity = 63/233 (27.04%), Postives = 106/233 (45.49%), Query Frame = 0 Query: 51 SPFHAYTFPITPKKVSPFVFHFSATTQDPFVDYSSAAAANTEQR------EEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSK--NRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPT-------------FNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVI 262
+P H + K FS +++ F+ Y A TE++ E ++ R+ N+P T T+E + L E+HG V +++ M+ K R+R F TM S ++A A + L EGR +KVN + P+ P + + +++ NL+ + K++ E SE VVSA+V +S G+GFV+F S++ E AI A ++
Sbjct: 24 TPLHTRVNVFSSKPFPSLAGTFSRSSRTRFIPY---AVTETEEKPAALDPSSEAAR-RVYIGNIPRTVTNEQLTKLVEEHGAVEKVQV-MYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITE-------KPIASSPDLSVLQSEDSAFVDSPYKVYVGNLA-KTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLL 243
BLAST of CMJ_chr3_017960.3 vs. ExPASy Swiss-Prot
Match: FCA_ORYSJ (Flowering time control protein FCA OS=Oryza sativa subsp. japonica OX=39947 GN=FCA PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.569e-14 Identity = 54/166 (32.53%), Postives = 84/166 (50.60%), Query Frame = 0 Query: 102 RLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSK-NRNRGLAFVTMGSPDEATAALNNLES-YEFEG--RTLKVNYAKVKKKNPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIM 263
+L +VP T+T +D+R LFE+HG V+++ L K +G FV + +EA A+ L + Y G ++V YA +++ LF+A+L+ +A AK++ E F G V I D R+S G GFV F S++ A A+SA G +M
Sbjct: 123 KLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIRALHNQYTLPGAMGPIQVRYADGERERHG-------AIEHKLFVASLNKQATAKEIEEIFAPYGH--VEDVYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVM 279
BLAST of CMJ_chr3_017960.3 vs. Araport11
Match: AT4G09040.1 (| RNA-binding (RRM/RBD/RNP motifs) family protein | Chr4:5795075-5797315 REVERSE LENGTH=304 | 201606) HSP 1 Score: 239.195 bits (609), Expect = 5.429e-78 Identity = 130/216 (60.19%), Postives = 164/216 (75.93%), Query Frame = 0 Query: 57 TFPIT-PKKVSPFVFHFSATTQDPFVDYSSAAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQ-PKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMCLVIALS 270
TFP + P K +FS TTQ+P ++ SS++++ E EEE SKTRL+AQNVPWTST EDIR+LFE++G+V+DIE+SMH K RNRGL F+ M SP+EA AL +LES E+EGR LKV+YAK KKK P + P P PTFNLF+ANL+FEARAK L+EFF ++ +VVS EVIFH+NPRRS+GYGFVSFK+KK AE A+ FQGK + I L+
Sbjct: 49 TFPDSIPAKSRNLTSYFSTTTQEPVLESSSSSSSAPEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGLVFIEMASPEEAATALKSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRLA 264
BLAST of CMJ_chr3_017960.3 vs. Araport11
Match: AT4G09040.2 (| RNA-binding (RRM/RBD/RNP motifs) family protein | Chr4:5795075-5797193 REVERSE LENGTH=244 | 201606) HSP 1 Score: 220.32 bits (560), Expect = 1.716e-71 Identity = 113/173 (65.32%), Postives = 138/173 (79.77%), Query Frame = 0 Query: 99 SKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQ-PKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMCLVIALS 270
SKTRL+AQNVPWTST EDIR+LFE++G+V+DIE+SMH K RNRGL F+ M SP+EA AL +LES E+EGR LKV+YAK KKK P + P P PTFNLF+ANL+FEARAK L+EFF ++ +VVS EVIFH+NPRRS+GYGFVSFK+KK AE A+ FQGK + I L+
Sbjct: 32 SKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGLVFIEMASPEEAATALKSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRLA 204
BLAST of CMJ_chr3_017960.3 vs. Araport11
Match: AT2G35410.1 (| RNA-binding (RRM/RBD/RNP motifs) family protein | Chr2:14898341-14899590 FORWARD LENGTH=308 | 201606) HSP 1 Score: 135.191 bits (339), Expect = 1.171e-37 Identity = 76/204 (37.25%), Postives = 118/204 (57.84%), Query Frame = 0 Query: 73 SATTQDPFVDYSSAAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYA-KVKKKNPAPPVQ-PKPFPT---FNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMCLVIALSY 271
S ++ D ++ TE+ + K +L N+PW+ + DI LF Q GTV ++E+ +NRG AFVTM S +EA AA++ ++++ GR + V++A + KK P P P P P L+++NL+++AR+ LRE F + ++ VSA V+F D RS+GYGFVSF +++ AE AI+ GK IM I L +
Sbjct: 67 SVAEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPAPGDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEAENAITKLNGKEIMGRPITLKF 270
BLAST of CMJ_chr3_017960.3 vs. Araport11
Match: AT3G52380.1 (| chloroplast RNA-binding protein 33 | Chr3:19421619-19422855 FORWARD LENGTH=329 | 201606) HSP 1 Score: 88.5817 bits (218), Expect = 3.903e-20 Identity = 52/168 (30.95%), Postives = 94/168 (55.95%), Query Frame = 0 Query: 102 RLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSK--NRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPT--------FNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQG 259
RL N+P+T T ++ +F + GTV+D+++ ++ K +R+RG FVTMGS +EA A+ S + GRT+KVN+ +V + ++ K ++ NL + ++ L++ F + V+ A+VI+ N RS G+GF+SF+S + ++A++ G
Sbjct: 117 RLYVGNLPYTITSSELSQIFGEAGTVVDVQI-VYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAF-GDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNG 282
BLAST of CMJ_chr3_017960.3 vs. Araport11
Match: AT1G60000.1 (| RNA-binding (RRM/RBD/RNP motifs) family protein | Chr1:22093678-22094540 REVERSE LENGTH=258 | 201606) HSP 1 Score: 84.3445 bits (207), Expect = 5.038e-19 Identity = 54/161 (33.54%), Postives = 80/161 (49.69%), Query Frame = 0 Query: 100 KTRLVAQNVPWTSTHEDIRALFEQHGTVLDIE-LSMHSKNRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQG 259
T+L N+P+ + + + +E L ++RG AFVTM + ++ ++NL+ E+ GR LKVN+A K N P P LF+ NLS+ ++ L F E DVV A V+F + RS GYGFV + SK ETA+ + G
Sbjct: 84 NTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFADKPKPNKEPLY---PETEHKLFVGNLSWTVTSESLAGAF-RECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESLDG 240
BLAST of CMJ_chr3_017960.3 vs. Araport11
Match: AT4G24770.2 (| 31-kDa RNA binding protein | Chr4:12766223-12767952 REVERSE LENGTH=329 | 201606) HSP 1 Score: 82.0333 bits (201), Expect = 1.093e-17 Identity = 58/188 (30.85%), Postives = 89/188 (47.34%), Query Frame = 0 Query: 82 DYSSAAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSK-NRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPF-PTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMCLVI 267
D S A + + E + +L N+ + + + LFEQ GTV E+ + + +++RG FVTM S DEA A+ Y+ GR L VN K + P P+ + P F +++ NL ++ L + F SE VV A V++ RS G+GFV+ AISA G+ + I
Sbjct: 131 DVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN--KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLF-SEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAI 315
BLAST of CMJ_chr3_017960.3 vs. Araport11
Match: AT4G24770.1 (| 31-kDa RNA binding protein | Chr4:12766223-12767952 REVERSE LENGTH=329 | 201606) HSP 1 Score: 82.0333 bits (201), Expect = 1.093e-17 Identity = 58/188 (30.85%), Postives = 89/188 (47.34%), Query Frame = 0 Query: 82 DYSSAAAANTEQREEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSK-NRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPF-PTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMCLVI 267
D S A + + E + +L N+ + + + LFEQ GTV E+ + + +++RG FVTM S DEA A+ Y+ GR L VN K + P P+ + P F +++ NL ++ L + F SE VV A V++ RS G+GFV+ AISA G+ + I
Sbjct: 131 DVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN--KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLF-SEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAI 315
BLAST of CMJ_chr3_017960.3 vs. Araport11
Match: AT5G50250.1 (| chloroplast RNA-binding protein 31B | Chr5:20452677-20453965 REVERSE LENGTH=289 | 201606) HSP 1 Score: 80.8777 bits (198), Expect = 1.488e-17 Identity = 71/253 (28.06%), Postives = 114/253 (45.06%), Query Frame = 0 Query: 40 QHYNYFFPLSSSPFHAYTFPITPKKV---SPFVFHFSATT--------QDPFVDYSSAAAANTEQREEEYS------KTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRN----RGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPF-PTFNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIMCLVIALS 270
+ + + F LSS P + T + K + SP V S T+ +D + +S + + E+ + +L N+P+ + + LFEQ GTV E+S NR+ RG FVTM + +EA A+ S+E GR L VN A + P QP+ + F +++ NL ++ + L F SE VV A V+ RS G+GFV ++ AI+A G+ + I ++
Sbjct: 36 ESHRFNFSLSSRPVN-LTLSLKSKTLRNSSPVVTFVSQTSNWAEEEEGEDGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQALAMLFEQAGTV---EISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRA--APRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLF-SEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVN 281
BLAST of CMJ_chr3_017960.3 vs. Araport11
Match: AT3G52150.2 (| RNA-binding (RRM/RBD/RNP motifs) family protein | Chr3:19342074-19343090 FORWARD LENGTH=253 | 201606) HSP 1 Score: 74.3294 bits (181), Expect = 2.309e-15 Identity = 63/233 (27.04%), Postives = 106/233 (45.49%), Query Frame = 0 Query: 51 SPFHAYTFPITPKKVSPFVFHFSATTQDPFVDYSSAAAANTEQR------EEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSK--NRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPT-------------FNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVI 262
+P H + K FS +++ F+ Y A TE++ E ++ R+ N+P T T+E + L E+HG V +++ M+ K R+R F TM S ++A A + L EGR +KVN + P+ P + + +++ NL+ + K++ E SE VVSA+V +S G+GFV+F S++ E AI A ++
Sbjct: 24 TPLHTRVNVFSSKPFPSLAGTFSRSSRTRFIPY---AVTETEEKPAALDPSSEAAR-RVYIGNIPRTVTNEQLTKLVEEHGAVEKVQV-MYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITE-------KPIASSPDLSVLQSEDSAFVDSPYKVYVGNLA-KTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLL 243
BLAST of CMJ_chr3_017960.3 vs. Araport11
Match: AT3G52150.1 (| RNA-binding (RRM/RBD/RNP motifs) family protein | Chr3:19342074-19343090 FORWARD LENGTH=253 | 201606) HSP 1 Score: 74.3294 bits (181), Expect = 2.309e-15 Identity = 63/233 (27.04%), Postives = 106/233 (45.49%), Query Frame = 0 Query: 51 SPFHAYTFPITPKKVSPFVFHFSATTQDPFVDYSSAAAANTEQR------EEEYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSK--NRNRGLAFVTMGSPDEATAALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPT-------------FNLFIANLSFEARAKDLREFFISEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVI 262
+P H + K FS +++ F+ Y A TE++ E ++ R+ N+P T T+E + L E+HG V +++ M+ K R+R F TM S ++A A + L EGR +KVN + P+ P + + +++ NL+ + K++ E SE VVSA+V +S G+GFV+F S++ E AI A ++
Sbjct: 24 TPLHTRVNVFSSKPFPSLAGTFSRSSRTRFIPY---AVTETEEKPAALDPSSEAAR-RVYIGNIPRTVTNEQLTKLVEEHGAVEKVQV-MYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITE-------KPIASSPDLSVLQSEDSAFVDSPYKVYVGNLA-KTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLL 243 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_017960.3 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_017960.3 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_017960.3 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_017960.3_cmj_v1 ID=CMJ_chr3_017960.3_cmj_v1; Name=CMJ_chr3_017960.3; organism=Citrus maxima; type=mRNA; length=825bpback to top protein sequence of CMJ_chr3_017960.3_cmj_v1 >CMJ_chr3_017960.3_cmj_v1 ID=CMJ_chr3_017960.3_cmj_v1; Name=CMJ_chr3_017960.3_cmj_v1; organism=Citrus maxima; type=polypeptide; length=275bpback to top mRNA from alignment at chr3:35635917..35638885+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2969bp; location=Sequence derived from: chr3:35635917..35638885+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:35635917..35638885+ >CMJ_chr3_017960.3_cmj_v1 ID=CMJ_chr3_017960.3_cmj_v1; Name=CMJ_chr3_017960.3; organism=Citrus maxima; type=CDS; length=825bp; location=Sequence derived from: chr3:35635917..35638885+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|