CMJ_chr3_018470.3
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_018470.3 vs. ExPASy TrEMBL
Match: A0A067GMK4|A0A067GMK4_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g033701mg PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 1.147e-66 Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0 Query: 1 MAQGNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLKSFTILLLEYSSCEVAALI 102 MAQGNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLKSFTIL+LEYSSCEVAALI Sbjct: 1 MAQGNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLKSFTILVLEYSSCEVAALI 102
BLAST of CMJ_chr3_018470.3 vs. ExPASy TrEMBL
Match: A0A2H5NPK6|A0A2H5NPK6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_060800 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 8.471e-55 Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0 Query: 1 MAQGNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLKSFTI 88 MAQGNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLK + I Sbjct: 1 MAQGNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLKRYRI 88
BLAST of CMJ_chr3_018470.3 vs. ExPASy TrEMBL
Match: A0A067GZR1|A0A067GZR1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g033701mg PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 8.471e-55 Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0 Query: 1 MAQGNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLKSFTI 88 MAQGNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLK + I Sbjct: 1 MAQGNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLKRYRI 88
BLAST of CMJ_chr3_018470.3 vs. ExPASy TrEMBL
Match: V4SHS9|V4SHS9_CITCL (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10003485mg PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 3.987e-54 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 Query: 1 MAQGNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLK 84 MAQGNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLK Sbjct: 1 MAQGNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLK 84
BLAST of CMJ_chr3_018470.3 vs. ExPASy TrEMBL
Match: A0A5C7H6U1|A0A5C7H6U1_9ROSI (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_021962 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.748e-40 Identity = 65/92 (70.65%), Postives = 73/92 (79.35%), Query Frame = 0 Query: 1 MAQGNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLKSFTILLLE 92 MAQ ND AL+SSLVWLAVIMVIVG+ T SWKKIM TYVVGI+GIAGL LPDWDFFDR +SRW P++ EER +ILA R TSL K + I L Sbjct: 1 MAQTNDVALRSSLVWLAVIMVIVGMYTHSWKKIMVTYVVGILGIAGLFLPDWDFFDRSYSRWCYPISTEERDAILALRHTSLFKRYRIYPLR 92
BLAST of CMJ_chr3_018470.3 vs. ExPASy TrEMBL
Match: M5Y1Z1|M5Y1Z1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G517300 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.738e-34 Identity = 53/82 (64.63%), Postives = 72/82 (87.80%), Query Frame = 0 Query: 5 NDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLKSF 86 NDA ++SLVWLA ++V+VG+CT+S+KK+M TYVVG++GI+GL+LPDW +FDRDFSRWT PV+AEERAS +AQR + L++ F Sbjct: 3 NDAVFRASLVWLAAVIVVVGVCTQSFKKMMYTYVVGVLGISGLLLPDWGYFDRDFSRWTSPVSAEERASEVAQR-SGLIRRF 83
BLAST of CMJ_chr3_018470.3 vs. ExPASy TrEMBL
Match: A0A5E4FTM0|A0A5E4FTM0_PRUDU (PREDICTED: signal peptidase complex DTM1 OS=Prunus dulcis OX=3755 GN=ALMOND_2B012172 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 9.643e-34 Identity = 53/82 (64.63%), Postives = 72/82 (87.80%), Query Frame = 0 Query: 5 NDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLKSF 86 NDA ++SLVWLA ++V+VG+CT+S+KK+M TYVVG++GI+GL+LPDW +FDRDFSRWT PV+AEERAS +AQR + L++ F Sbjct: 3 NDAVFRASLVWLAAVIVVVGVCTQSFKKMMYTYVVGVLGISGLLLPDWGYFDRDFSRWTSPVSAEERASEVAQR-SGLIRRF 83
BLAST of CMJ_chr3_018470.3 vs. ExPASy TrEMBL
Match: A0A6J5TVC4|A0A6J5TVC4_PRUAR (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS9735 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.240e-33 Identity = 53/82 (64.63%), Postives = 72/82 (87.80%), Query Frame = 0 Query: 5 NDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLKSF 86 NDA ++SLVWLA ++V+VG+CT+S+KK+M TYVVG++GI+GL+LPDW +FDRDFSRWT PV+AEERAS +AQR + L++ F Sbjct: 3 NDAVFRASLVWLAAVIVVVGVCTQSFKKMMLTYVVGVLGISGLLLPDWGYFDRDFSRWTSPVSAEERASEVAQR-SGLIRRF 83
BLAST of CMJ_chr3_018470.3 vs. ExPASy TrEMBL
Match: A0A5E4FTT6|A0A5E4FTT6_PRUDU (PREDICTED: signal peptidase complex DTM1 OS=Prunus dulcis OX=3755 GN=ALMOND_2B012172 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.533e-33 Identity = 53/83 (63.86%), Postives = 72/83 (86.75%), Query Frame = 0 Query: 4 GNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQTSLLKSF 86 NDA ++SLVWLA ++V+VG+CT+S+KK+M TYVVG++GI+GL+LPDW +FDRDFSRWT PV+AEERAS +AQR + L++ F Sbjct: 31 ANDAVFRASLVWLAAVIVVVGVCTQSFKKMMYTYVVGVLGISGLLLPDWGYFDRDFSRWTSPVSAEERASEVAQR-SGLIRRF 112
BLAST of CMJ_chr3_018470.3 vs. ExPASy TrEMBL
Match: A0A5N5HQ60|A0A5N5HQ60_9ROSA (Signal peptidase complex subunit 1 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_033762 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.527e-33 Identity = 57/99 (57.58%), Postives = 75/99 (75.76%), Query Frame = 0 Query: 5 NDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQRQ--TSLLKSFTILLLEYSSCEVAAL 101 NDA +SSLVWLAVIM +VGI T+S+KK+M TYVVG++GIAGL+LPDW +FDRDFSRWT PV+ EERA +AQR + + + + L+ Y++ AL Sbjct: 3 NDAVFRSSLVWLAVIMAVVGIYTQSFKKMMLTYVVGVLGIAGLLLPDWGYFDRDFSRWTSPVSFEERAYEIAQRSGLITRFRKYPMRLVAYATVYGFAL 101
BLAST of CMJ_chr3_018470.3 vs. ExPASy Swiss-Prot
Match: DTM1_ORYSJ (Signal peptidase complex-like protein DTM1 OS=Oryza sativa subsp. japonica OX=39947 GN=DTM1 PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 7.037e-12 Identity = 27/56 (48.21%), Postives = 37/56 (66.07%), Query Frame = 0 Query: 31 KKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEER--ASILAQRQTSLLK 84 +K ATY GI+ IAG++LPDW+FFDRD+S+W P+ A R A A R+ + K Sbjct: 29 RKAAATYGFGILAIAGVLLPDWEFFDRDYSQWLTPMPASRRTAAEAAADREHDVWK 84
BLAST of CMJ_chr3_018470.3 vs. Araport11
Match: AT1G34640.1 (| peptidase | Chr1:12687706-12688427 REVERSE LENGTH=110 | 201606) HSP 1 Score: 91.2781 bits (225), Expect = 4.471e-25 Identity = 49/94 (52.13%), Postives = 69/94 (73.40%), Query Frame = 0 Query: 4 GNDAALKSSLVWLAVIMVIVGICTESWKKIMATYVVGIIGIAGLILPDWDFFDRDFSRWTCPVTAEERASILAQR-QTSLLKSFTILLLEYSSC 96 GN+AAL+SS+V LAV+MV+V + T+S KK + TY VGI I G++LPDWDFFDR FSRW PVTAEER++ LA++ S + + + ++ Y + Sbjct: 2 GNEAALRSSMVGLAVVMVVVWLWTQSLKKTVVTYAVGISLIGGILLPDWDFFDRSFSRWGYPVTAEERSAALARKSHPSRFRVYPMRMVLYGTV 95 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_018470.3 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_018470.3 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 1 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_018470.3 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 1 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_018470.3_cmj_v1 ID=CMJ_chr3_018470.3_cmj_v1; Name=CMJ_chr3_018470.3; organism=Citrus maxima; type=mRNA; length=309bpback to top protein sequence of CMJ_chr3_018470.3_cmj_v1 >CMJ_chr3_018470.3_cmj_v1 ID=CMJ_chr3_018470.3_cmj_v1; Name=CMJ_chr3_018470.3_cmj_v1; organism=Citrus maxima; type=polypeptide; length=103bpback to top mRNA from alignment at chr3:36014191..36015632+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1442bp; location=Sequence derived from: chr3:36014191..36015632+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:36014191..36015632+ >CMJ_chr3_018470.3_cmj_v1 ID=CMJ_chr3_018470.3_cmj_v1; Name=CMJ_chr3_018470.3; organism=Citrus maxima; type=CDS; length=309bp; location=Sequence derived from: chr3:36014191..36015632+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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