CMJ_chr3_019560.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_019560.1 vs. ExPASy TrEMBL
Match: V4V5S5|V4V5S5_CITCL (RRM_2 domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10003827mg PE=4 SV=1) HSP 1 Score: 623.624 bits (1607), Expect = 0.000e+0 Identity = 293/297 (98.65%), Postives = 295/297 (99.33%), Query Frame = 0 Query: 35 LLMRPVNSLNPHAKPFVPQPTKALFLPHHAPPALTHHFSSFQLHYPMNMNMMCLYHQPTTPIRSSYPYSYSYPKGNSNGEACDCHVQLLWSFSAPKEAATDDDTGKKKSVGDGDDGYYQVLLAGGETTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPTIVGRCINVGAAAPVYRRKSPLMMRRKCFKK 331 LLMRPVNSLNPHAKPFVPQPTKALFLPHHAPPALTHHFSSFQLHYPMNMNMMCLYHQPTTPIRSSYPYSYSYPKGNS+GEACDCHVQLLWSFSAPKEAATDDDTGK KSVGDGDDGYYQVLLAGGETTLMIKNIPNRFKRHDLLQILDNHCWAENMK+KLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGW RTRPTIVGRCINVGAAAPVYRRKSPLMMRRKCFKK Sbjct: 1 LLMRPVNSLNPHAKPFVPQPTKALFLPHHAPPALTHHFSSFQLHYPMNMNMMCLYHQPTTPIRSSYPYSYSYPKGNSSGEACDCHVQLLWSFSAPKEAATDDDTGKTKSVGDGDDGYYQVLLAGGETTLMIKNIPNRFKRHDLLQILDNHCWAENMKAKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWMRTRPTIVGRCINVGAAAPVYRRKSPLMMRRKCFKK 297
BLAST of CMJ_chr3_019560.1 vs. ExPASy TrEMBL
Match: A0A2H5NNP8|A0A2H5NNP8_CITUN (RRM_2 domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_061620 PE=4 SV=1) HSP 1 Score: 570.852 bits (1470), Expect = 0.000e+0 Identity = 279/331 (84.29%), Postives = 282/331 (85.20%), Query Frame = 0 Query: 1 MKTKAQPWTHAPQPPSSKSELLTNTSTTTEADRQLLMRPVNSLNPHAKPFVPQPTKALFLPHHAPPALTHHFSSFQLHYPMNMNMMCLYHQPTTPIRSSYPYSYSYPKGNSNGEACDCHVQLLWSFSAPKEAATDDDTGKKKSVGDGDDGYYQVLLAGGETTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPTIVGRCINVGAAAPVYRRKSPLMMRRKCFKK 331 MKTKAQPWTHAPQPPSSKSELLTNTSTTTEADRQLLMRPVNSLNPHAKPFVPQPTKALFLPHHAPPALTHHFSSFQLHYPMNMNMMCLYHQPTTPIRSSYPYSYSYPKGNSNGEACDCHVQLLWSFSAPKEAAT+DDTGK KSVGDGDDGYYQVLLAGGETTLMIKNIPNRFKRHDLLQILDNHCWAENMK+KLHSDPCRSEYDFLYLPMDFC + QGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGW RTRPTIVGRCINVGAAAPVYRRKSPLMMRRKCFKK Sbjct: 1 MKTKAQPWTHAPQPPSSKSELLTNTSTTTEADRQLLMRPVNSLNPHAKPFVPQPTKALFLPHHAPPALTHHFSSFQLHYPMNMNMMCLYHQPTTPIRSSYPYSYSYPKGNSNGEACDCHVQLLWSFSAPKEAATNDDTGKTKSVGDGDDGYYQVLLAGGETTLMIKNIPNRFKRHDLLQILDNHCWAENMKAKLHSDPCRSEYDFLYLPMDFCACGD--------------------------------------------QGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWMRTRPTIVGRCINVGAAAPVYRRKSPLMMRRKCFKK 287
BLAST of CMJ_chr3_019560.1 vs. ExPASy TrEMBL
Match: A0A067GME5|A0A067GME5_CITSI (RRM_2 domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g040456mg PE=4 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 5.058e-85 Identity = 126/142 (88.73%), Postives = 127/142 (89.44%), Query Frame = 0 Query: 164 MIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPTIVGR 305 MIKNIPNRFKRHDLLQILDNHCWAENMK+KLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQ S QGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGW RTRPTIVGR Sbjct: 1 MIKNIPNRFKRHDLLQILDNHCWAENMKAKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQW----LEFLTSACGDQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWMRTRPTIVGR 138
BLAST of CMJ_chr3_019560.1 vs. ExPASy TrEMBL
Match: A0A6A6L837|A0A6A6L837_HEVBR (RRM_2 domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_001783 PE=4 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.795e-60 Identity = 97/147 (65.99%), Postives = 116/147 (78.91%), Query Frame = 0 Query: 159 GETTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPTIVGR 305 G+T+LMIKNIPN+F+RHDLL+ILD HC EN K+K SDP +SEYDFLYLPMDF + +NLGYAFVNFT +VAA RF K FNK WE V NKKTCEIS A IQG +AL+ HF+ F CHT+ YLPV+L+PPRDG ++RP +VGR Sbjct: 167 GKTSLMIKNIPNQFQRHDLLRILDKHCLEENRKAKSRSDPFKSEYDFLYLPMDFRNHSNLGYAFVNFTNAVAASRFCKTFNKYEWE--VSFNKKTCEISCAVIQGREALRNHFKNSVFYCHTNGYLPVVLSPPRDGLVQSRPVVVGR 311
BLAST of CMJ_chr3_019560.1 vs. ExPASy TrEMBL
Match: A0A6A6L5W8|A0A6A6L5W8_HEVBR (RRM_2 domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_001735 PE=4 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 4.074e-60 Identity = 97/147 (65.99%), Postives = 116/147 (78.91%), Query Frame = 0 Query: 159 GETTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPTIVGR 305 G+T+LMIKNIPN+F+RHDLL+ILD HC EN K+K SDP +SEYDFLYLPMDF + +NLGYAFVNFT +VAA RF K FNK WE V NKKTCEIS A IQG +AL+ HF+ F CHT+ YLPV+L+PPRDG ++RP +VGR Sbjct: 173 GKTSLMIKNIPNQFQRHDLLRILDKHCLEENRKAKSRSDPFKSEYDFLYLPMDFRNHSNLGYAFVNFTNAVAASRFCKTFNKYEWE--VSFNKKTCEISCAVIQGREALRNHFKNSVFYCHTNGYLPVVLSPPRDGLVQSRPVVVGR 317
BLAST of CMJ_chr3_019560.1 vs. ExPASy TrEMBL
Match: A0A5C7H872|A0A5C7H872_9ROSI (RRM_2 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_022078 PE=4 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 6.152e-60 Identity = 102/201 (50.75%), Postives = 129/201 (64.18%), Query Frame = 0 Query: 156 LAGGETTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHG----------------------------ANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGN-KKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPTIVGRCINVGAAAPVYRRKSPLMMRRK 327 + G T+LMI+NIPN F R DL++ILD HC EN K+KL SDPCRSEYDF+YLPMDF + +NLGYAFVNFTT AA+RF AF++ +WE PG KK CEI+ A IQG + L +F++ F+CHT YLPV L+PPRDGW T P+++G+C+ VGAA PV RK L+MR+K Sbjct: 172 ILKGNTSLMIRNIPNHFDRRDLIRILDKHCRNENSKAKLISDPCRSEYDFVYLPMDFGYKTITSPTSHSFFAYDDHFSYFVVSFVSFCSNLGYAFVNFTTCAAALRFCVAFDQYQWEVSAPGQKKKICEITCATIQGKEGLVKNFEKSKFSCHTRRYLPVTLSPPRDGWNDTAPSLIGKCVGVGAAPPVNLRKVRLLMRKK 372
BLAST of CMJ_chr3_019560.1 vs. ExPASy TrEMBL
Match: A0A2C9WEC3|A0A2C9WEC3_MANES (RRM_2 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_02G159500 PE=4 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.578e-59 Identity = 110/205 (53.66%), Postives = 139/205 (67.80%), Query Frame = 0 Query: 114 EACDCHVQLLW---SFSAPKEAATDDDTGKK-KSVGDGD-DGY--------YQVLLAGGETTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPTIVGR 305 E D + LW FS + DD G+K GDGD DG+ YQ+ L G+T+LMI+NIPN+F+RHDLL+ILDNHC EN K++L SD +SEYDFLYLPMDF + AN G AFVNFT ++AA RF ++F+K W+ V NKK CEIS A IQG +ALK F+ F+CH+D YLPV+L+PPRDG R++P IVGR Sbjct: 176 ERRDSCAERLWVPKKFSV-ENKNDDDGIGRKLDEEGDGDHDGFGVRSSLSDYQIGL-DGKTSLMIRNIPNQFERHDLLRILDNHCLEENRKAELQSDSFKSEYDFLYLPMDFRNRANYGDAFVNFTNAIAASRFCESFHKYEWKVSV--NKKICEISCAVIQGKEALKNQFKNSLFHCHSDGYLPVVLSPPRDGVVRSKPVIVGR 376
BLAST of CMJ_chr3_019560.1 vs. ExPASy TrEMBL
Match: A0A067K969|A0A067K969_JATCU (RRM_2 domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_12043 PE=4 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 9.742e-57 Identity = 99/170 (58.24%), Postives = 120/170 (70.59%), Query Frame = 0 Query: 135 DDDTGKKKSVGDGDDGYYQVLLAGGETTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPTIVG 304 D D SV D D+ ++ G+T+LMI+NIPN+F+RHDLL+ILD HC EN K++L SDP RSEYDFLYLPMDF + AN GYAFVNFT VAA RF K+F+K W V NKK CEIS A IQG DALK HF+ F+CHT+ YLPV+ PPRDG R++ +VG Sbjct: 233 DSDGALVASVADRDEVNHE-----GKTSLMIRNIPNQFERHDLLRILDKHCLEENRKARLQSDPVRSEYDFLYLPMDFRNRANYGYAFVNFTNPVAASRFWKSFHKYEWPVYV--NKKICEISCAVIQGKDALKNHFRNSVFSCHTNGYLPVVFWPPRDGHVRSKIILVG 395
BLAST of CMJ_chr3_019560.1 vs. ExPASy TrEMBL
Match: A0A2K2BFR9|A0A2K2BFR9_POPTR (RRM_2 domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G088200 PE=4 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 1.569e-56 Identity = 103/201 (51.24%), Postives = 130/201 (64.68%), Query Frame = 0 Query: 133 ATDDDTGKKKSVGDG--DDGYYQVLLAGGETTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPTIVGRCINVGAAAPVYRRKSPLMMRRKCFKK 331 ++ DD G DG +V LAG +TTLMIKNIPN+ RHDLL+ILD HC EN K+ D +SE+DF YLPMDF ANLGYAFVNFT + A+RF KAFNK +W+ V N+KTCE+S A IQG DAL ++ F CHT++YLPV+L P RDGW++T P+IVGR ++ P + + RRK F K Sbjct: 204 SSGDDQGLSVKEEDGVLSCSTDEVFLAG-KTTLMIKNIPNQLGRHDLLRILDVHCLGENQKAMQRFDRVKSEFDFFYLPMDFVRRANLGYAFVNFTNAAGALRFRKAFNKYKWD--VGANRKTCEVSLATIQGKDALCNRYKNSVFPCHTNAYLPVVLLPARDGWRQTAPSIVGRRVD-----PAFPLERGCFSRRKSFNK 396
BLAST of CMJ_chr3_019560.1 vs. ExPASy TrEMBL
Match: A0A4U5QSK0|A0A4U5QSK0_POPAL (RNA-binding family protein OS=Populus alba OX=43335 GN=D5086_0000040660 PE=4 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 5.643e-56 Identity = 103/201 (51.24%), Postives = 128/201 (63.68%), Query Frame = 0 Query: 133 ATDDDTGKKKSVGDG--DDGYYQVLLAGGETTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPTIVGRCINVGAAAPVYRRKSPLMMRRKCFKK 331 ++ DD G DG +V LAG +TTLMIKNIPN+ RHDLL+ILD HC EN K+ D +SEYDF YLPMDF ANLGYAFVNFT + A+RF KAFNK +W+ V N+KTCE+S A IQG DAL ++ F CHT++YLPV+L P RDGW +T P+IVGR ++ P + + RRK K Sbjct: 204 SSGDDQGLSAKEEDGVLSCSTDEVFLAG-KTTLMIKNIPNQLGRHDLLRILDVHCLGENQKAMQRCDRVKSEYDFFYLPMDFVRRANLGYAFVNFTNAAGALRFWKAFNKYKWD--VGANRKTCEVSLATIQGKDALCNRYKNSVFPCHTNAYLPVVLLPARDGWSQTAPSIVGRRVD-----PAFPLERGCFSRRKSLNK 396
BLAST of CMJ_chr3_019560.1 vs. ExPASy Swiss-Prot
Match: OML6_ORYSJ (Protein MEI2-like 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ML6 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.737e-38 Identity = 71/152 (46.71%), Postives = 91/152 (59.87%), Query Frame = 0 Query: 161 TTLMIKNIPNRFKRHDLLQILDNHCWAENMK-----SKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPTIVGRCI 307 T+LMI+NIPN+F + L+ ILD HC EN K +SEYDF Y+P+DF G N GYAFVN TT+ AA R RW+A + G K C++ AAIQG+DA HF CF C T +LPV PPRDG ++T+ +VGR + Sbjct: 170 TSLMIRNIPNKFLKARLMAILDQHCADENGKCHRRGGGGGRSVVKSEYDFFYVPIDFKTGFNKGYAFVNMTTATAARRLRAFLQDHRWDAAMSG--KVCDVVPAAIQGLDAFVAHFSASCFPCRTKEFLPVWFEPPRDGEQQTKAHVVGRLV 319
BLAST of CMJ_chr3_019560.1 vs. ExPASy Swiss-Prot
Match: EAR1_ORYSI (Protein terminal ear1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=PLA2 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 7.117e-37 Identity = 73/149 (48.99%), Postives = 99/149 (66.44%), Query Frame = 0 Query: 161 TTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLH-SDPCR--SEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPT-IVGR 305 TT+MI+NIPN++ + LL +LDNHC N + + D + S YDFLYLP+DF + N+GY FVN T+ AAVR KAF+K WE V ++K C+++ A +QG+DALK HF+ F C +D YLPV+ +PPRDG T P +VGR Sbjct: 455 TTVMIRNIPNKYSQKLLLNMLDNHCILSNQQIEASCEDEAQPFSSYDFLYLPIDFNNKCNVGYGFVNLTSPEAAVRLYKAFHKQPWE--VFNSRKICQVTYARVQGLDALKEHFKNSKFPCDSDEYLPVVFSPPRDGKLLTEPVPLVGR 601
BLAST of CMJ_chr3_019560.1 vs. ExPASy Swiss-Prot
Match: EAR1_ORYSJ (Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=PLA2 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 8.203e-37 Identity = 73/149 (48.99%), Postives = 99/149 (66.44%), Query Frame = 0 Query: 161 TTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLH-SDPCR--SEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPT-IVGR 305 TT+MI+NIPN++ + LL +LDNHC N + + D + S YDFLYLP+DF + N+GY FVN T+ AAVR KAF+K WE V ++K C+++ A +QG+DALK HF+ F C +D YLPV+ +PPRDG T P +VGR Sbjct: 458 TTVMIRNIPNKYSQKLLLNMLDNHCILSNQQIEASCEDEAQPFSSYDFLYLPIDFNNKCNVGYGFVNLTSPEAAVRLYKAFHKQPWE--VFNSRKICQVTYARVQGLDALKEHFKNSKFPCDSDEYLPVVFSPPRDGKLLTEPVPLVGR 604
BLAST of CMJ_chr3_019560.1 vs. ExPASy Swiss-Prot
Match: TE1_MAIZE (Protein terminal ear1 OS=Zea mays OX=4577 GN=TE1 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.666e-34 Identity = 70/148 (47.30%), Postives = 96/148 (64.86%), Query Frame = 0 Query: 161 TTLMIKNIPNRFKRHDLLQILDNHCWAEN--MKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPT-IVGR 305 TT+MI+NIPN++ + LL +LDNHC N + + P S YDF+YLP+DF + N+GY FVN T+ A VR KAF+K WE V ++K C+++ A +QG++ALK HF+ F C +D YLPV +P RDG + T P IVGR Sbjct: 441 TTVMIRNIPNKYSQKLLLNMLDNHCIQSNEWIVASGEEQPF-SAYDFVYLPIDFNNKCNVGYGFVNLTSPEARVRLYKAFHKQPWE--VYNSRKICQVTYARVQGLEALKEHFKNSKFPCDSDEYLPVAFSPARDGKELTDPVPIVGR 585
BLAST of CMJ_chr3_019560.1 vs. ExPASy Swiss-Prot
Match: OML7_ORYSJ (Protein MEI2-like 7 OS=Oryza sativa subsp. japonica OX=39947 GN=OML7 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 9.048e-28 Identity = 61/145 (42.07%), Postives = 87/145 (60.00%), Query Frame = 0 Query: 156 LAGGETTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDF--CH---GANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKC-FNCHTDSYLPVILAPPRDG 294 L TT+M++NIPN+ R D++++LD+HC A + + R+EYD +Y+ MDF C+ +N+GYAFVNFTT+ AA +A + RW+ + K +I A IQG DAL HF + C TD YLP + +PPRDG Sbjct: 211 LKPAHTTVMVRNIPNKLTRSDMVRLLDDHC-ARENRRRGRGGEPRAEYDLVYVRMDFGMCNKERSSNMGYAFVNFTTAEAARGLQRALHGCRWKRSAFDSGKIIDIRAARIQGKDALVRHFGRTTYYECDTDEYLPAVFSPPRDG 354
BLAST of CMJ_chr3_019560.1 vs. ExPASy Swiss-Prot
Match: AML1_ARATH (Protein MEI2-like 1 OS=Arabidopsis thaliana OX=3702 GN=ML1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.511e-18 Identity = 48/116 (41.38%), Postives = 61/116 (52.59%), Query Frame = 0 Query: 161 TTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCF 276 TTLMIKNIPN++ LL +D HC + YDFLYLP+DF + N+GYAF+N V F KAFN +WE ++K ++ A IQG AL HFQ Sbjct: 744 TTLMIKNIPNKYTSKMLLSAIDEHC--------------KGTYDFLYLPIDFKNKCNVGYAFINLIEPEKIVPFFKAFNGKKWEKF--NSEKVATLTYARIQGKTALIAHFQNSSL 843
BLAST of CMJ_chr3_019560.1 vs. ExPASy Swiss-Prot
Match: AML4_ARATH (Protein MEI2-like 4 OS=Arabidopsis thaliana OX=3702 GN=ML4 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 6.097e-17 Identity = 47/128 (36.72%), Postives = 63/128 (49.22%), Query Frame = 0 Query: 161 TTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVIL 288 TTLMIKNIPN++ LL +D +C + YDFLYLP+DF + N+GYAF+N V F KAFN +WE ++K ++ IQG AL HFQ P++ Sbjct: 742 TTLMIKNIPNKYTSKMLLAAIDEYC--------------KGTYDFLYLPIDFKNKCNVGYAFINLIEPENIVPFYKAFNGKKWEKF--NSEKVASLAYGRIQGKSALIAHFQNSSLMNEDKRCRPILF 853
BLAST of CMJ_chr3_019560.1 vs. ExPASy Swiss-Prot
Match: OML3_ORYSJ (Protein MEI2-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ML3 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 3.321e-16 Identity = 50/125 (40.00%), Postives = 66/125 (52.80%), Query Frame = 0 Query: 156 LAGGE---TTLMIKNIPNRFKRHDLLQILD-NHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCF 276 +A GE TTLMIKNIPN++ LL ++D NH R YDF+YLP+DF + N+GYAF+N T + F K FN +WE ++K ++ A IQG AL HFQ Sbjct: 772 IAKGEDSRTTLMIKNIPNKYNCKLLLAVIDENH---------------RGTYDFIYLPIDFKNKCNVGYAFINMTDPQHIIPFYKTFNGKKWEKF--NSEKVASLAYARIQGRSALIAHFQNSSL 879
BLAST of CMJ_chr3_019560.1 vs. ExPASy Swiss-Prot
Match: OML5_ORYSJ (Protein MEI2-like 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ML5 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.631e-16 Identity = 54/165 (32.73%), Postives = 81/165 (49.09%), Query Frame = 0 Query: 137 DTGKKKSVGDG---DDGYYQV------LLAGGET--TLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAP 290 D G+ ++VG+ +D Q ++AG +T TLMIKNIPN++ + LL+++D + YDF YLP+DF + N+GYAF+N + V F KAF +WE ++K ++ A IQG AL HFQ P++ P Sbjct: 623 DRGRNQTVGNSGCQEDSRVQYQLDLEKIIAGKDTRTTLMIKNIPNKYTSNMLLEVID--------------ETHEGTYDFFYLPIDFKNKCNVGYAFINMASPGYIVSFFKAFAGRKWEKF--NSEKVVSLAYARIQGKAALVNHFQNSSLMNEDKRCRPMLFDP 771
BLAST of CMJ_chr3_019560.1 vs. ExPASy Swiss-Prot
Match: OML2_ORYSJ (Protein MEI2-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ML2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.523e-16 Identity = 54/151 (35.76%), Postives = 75/151 (49.67%), Query Frame = 0 Query: 161 TTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVIL--APPRDGWKRTRPTIVGRCINV 309 TTLMIKNIPN++ LL +D + H + YDF YLP+DF + N+GYAF+N + V V F +AFN +WE ++K ++ A IQG AL HFQ P++ P G + P I G CI++ Sbjct: 685 TTLMIKNIPNKYTSKMLLAAID----------EFH----KGTYDFFYLPIDFKNKCNVGYAFINMISPVHIVSFYQAFNGKKWEKF--NSEKVASLAYARIQGRTALISHFQNSSLMNEDKRCRPILFHSNGPDAGNQEPFP-INGICIHM 818
BLAST of CMJ_chr3_019560.1 vs. Araport11
Match: AT1G37140.1 (| MEI2 C-terminal RRM only like 1 | Chr1:14170351-14172040 REVERSE LENGTH=233 | 201606) HSP 1 Score: 146.362 bits (368), Expect = 4.176e-42 Identity = 80/163 (49.08%), Postives = 97/163 (59.51%), Query Frame = 0 Query: 158 GGETTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPTIVGRCINVGAAAPVYRRKS 320 G T++M+KNIPN R DLL+ILDNHC N KS YDFLYLPMDF ANLGYAFVNFT+S+AA RF + F W+ + KK CEI+ A QG + L HF+ F CHTD YLPV+L+PP +G+ T +G VGA R S Sbjct: 81 AGRTSVMVKNIPNCLGRMDLLRILDNHCRKHNEKS---------SYDFLYLPMDFGKRANLGYAFVNFTSSLAAERFRREFENFSWD-NIGFRKKICEITVAKYQGKEELTRHFRNSRFTCHTDDYLPVVLSPPSNGFTAYTLTKLG--YRVGALGGGSRNAS 231
BLAST of CMJ_chr3_019560.1 vs. Araport11
Match: AT3G26120.1 (| terminal EAR1-like 1 | Chr3:9546398-9549186 FORWARD LENGTH=615 | 201606) HSP 1 Score: 137.502 bits (345), Expect = 5.490e-36 Identity = 73/155 (47.10%), Postives = 96/155 (61.94%), Query Frame = 0 Query: 161 TTLMIKNIPNRFKRHDLLQILDNHCW-------AENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPTIVGRCIN 308 TTLMIKNIPN++ + LL +LD HC E+ K + H P S YDF+YLPMDF + N+GY FVN T+ AA RF KAF+ RWE V + K C+I+ A +QG++ LK HF+ F C + YLPV+ +PPRDG + T P + IN Sbjct: 408 TTLMIKNIPNKYSQKLLLDMLDKHCIHINEAITEEHNKHESHHQPY-SSYDFVYLPMDFNNKCNVGYGFVNMTSPEAAWRFYKAFHGQRWE--VFNSHKICQITYARVQGLEDLKEHFKSSKFPCEAELYLPVVFSPPRDGKQLTEPVSINITIN 559
BLAST of CMJ_chr3_019560.1 vs. Araport11
Match: AT1G67770.1 (| terminal EAR1-like 2 | Chr1:25408043-25410153 FORWARD LENGTH=527 | 201606) HSP 1 Score: 116.701 bits (291), Expect = 7.706e-29 Identity = 58/147 (39.46%), Postives = 86/147 (58.50%), Query Frame = 0 Query: 159 GETTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPC-RSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQE-KCFNCHTDSYLPVILAPPRDGWKRTRPTIV 303 G TT+MIKNIPN++ + LL++LD HC N + S YDF+YLP+DF + +N+GY FVN T+ A R K+F+ W +K CE++ A IQG+++L+ HF+ + D Y+PV+ +PPRDG P + Sbjct: 335 GRTTVMIKNIPNKYTQKLLLKMLDTHCKDCNQSVIKEGNKTPMSSYDFVYLPIDFSNKSNVGYGFVNMTSPEAVWRLYKSFHNQHWR-DFTTTRKICEVTYARIQGLESLREHFKNVRLAGVEIDEYMPVVFSPPRDGRLSPEPVAI 480
BLAST of CMJ_chr3_019560.1 vs. Araport11
Match: AT5G07930.3 (| MEI2 C-terminal RRM only like 2 | Chr5:2530865-2532333 FORWARD LENGTH=294 | 201606) HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-23 Identity = 60/147 (40.82%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 161 TTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRT-RPTIVGRC 306 TT+M++NIPNR+ R ++Q +D HC N KS + + S YDF+YLP+DF N GYAFVNFT + A +F A N W +KK EI+ A IQ + +K FQ + ++Y V +P R G K T + T+VG+C Sbjct: 135 TTVMLRNIPNRYTREMMIQFMDKHCEEAN-KSGKNEEFTISAYDFIYLPIDFRTTMNKGYAFVNFTNAKAVSKFKAACNNKPWCHFY--SKKELEITYARIQANELVK-RFQHMTY--PEEAYSAVCFSPARSGGKDTVQTTMVGKC 275
BLAST of CMJ_chr3_019560.1 vs. Araport11
Match: AT5G07930.1 (| MEI2 C-terminal RRM only like 2 | Chr5:2530865-2532216 FORWARD LENGTH=282 | 201606) HSP 1 Score: 97.0561 bits (240), Expect = 4.513e-23 Identity = 60/147 (40.82%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 161 TTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRT-RPTIVGRC 306 TT+M++NIPNR+ R ++Q +D HC N KS + + S YDF+YLP+DF N GYAFVNFT + A +F A N W +KK EI+ A IQ + +K FQ + ++Y V +P R G K T + T+VG+C Sbjct: 135 TTVMLRNIPNRYTREMMIQFMDKHCEEAN-KSGKNEEFTISAYDFIYLPIDFRTTMNKGYAFVNFTNAKAVSKFKAACNNKPWCHFY--SKKELEITYARIQANELVK-RFQHMTY--PEEAYSAVCFSPARSGGKDTVQTTMVGKC 275
BLAST of CMJ_chr3_019560.1 vs. Araport11
Match: AT1G37140.2 (| MEI2 C-terminal RRM only like 1 | Chr1:14170351-14172040 REVERSE LENGTH=202 | 201606) HSP 1 Score: 89.7373 bits (221), Expect = 5.267e-21 Identity = 47/96 (48.96%), Postives = 60/96 (62.50%), Query Frame = 0 Query: 216 ANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCFNCHTDSYLPVILAPPRDGWKRTRPTIVGRCINVGA 311 ANLGYAFVNFT+S+AA RF + F W+ + KK CEI+ A QG + L HF+ F CHTD YLPV+L+PP +G+ T +G VGA Sbjct: 99 ANLGYAFVNFTSSLAAERFRREFENFSWD-NIGFRKKICEITVAKYQGKEELTRHFRNSRFTCHTDDYLPVVLSPPSNGFTAYTLTKLG--YRVGA 191
BLAST of CMJ_chr3_019560.1 vs. Araport11
Match: AT5G61960.9 (| MEI2-like protein 1 | Chr5:24879001-24883553 REVERSE LENGTH=908 | 201606) HSP 1 Score: 88.5817 bits (218), Expect = 4.518e-19 Identity = 48/116 (41.38%), Postives = 61/116 (52.59%), Query Frame = 0 Query: 161 TTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCF 276 TTLMIKNIPN++ LL +D HC + YDFLYLP+DF + N+GYAF+N V F KAFN +WE ++K ++ A IQG AL HFQ Sbjct: 737 TTLMIKNIPNKYTSKMLLSAIDEHC--------------KGTYDFLYLPIDFKNKCNVGYAFINLIEPEKIVPFFKAFNGKKWEKF--NSEKVATLTYARIQGKTALIAHFQNSSL 836
BLAST of CMJ_chr3_019560.1 vs. Araport11
Match: AT5G61960.8 (| MEI2-like protein 1 | Chr5:24879001-24883553 REVERSE LENGTH=908 | 201606) HSP 1 Score: 88.5817 bits (218), Expect = 4.518e-19 Identity = 48/116 (41.38%), Postives = 61/116 (52.59%), Query Frame = 0 Query: 161 TTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCF 276 TTLMIKNIPN++ LL +D HC + YDFLYLP+DF + N+GYAF+N V F KAFN +WE ++K ++ A IQG AL HFQ Sbjct: 737 TTLMIKNIPNKYTSKMLLSAIDEHC--------------KGTYDFLYLPIDFKNKCNVGYAFINLIEPEKIVPFFKAFNGKKWEKF--NSEKVATLTYARIQGKTALIAHFQNSSL 836
BLAST of CMJ_chr3_019560.1 vs. Araport11
Match: AT5G61960.7 (| MEI2-like protein 1 | Chr5:24879001-24883553 REVERSE LENGTH=908 | 201606) HSP 1 Score: 88.5817 bits (218), Expect = 4.518e-19 Identity = 48/116 (41.38%), Postives = 61/116 (52.59%), Query Frame = 0 Query: 161 TTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCF 276 TTLMIKNIPN++ LL +D HC + YDFLYLP+DF + N+GYAF+N V F KAFN +WE ++K ++ A IQG AL HFQ Sbjct: 737 TTLMIKNIPNKYTSKMLLSAIDEHC--------------KGTYDFLYLPIDFKNKCNVGYAFINLIEPEKIVPFFKAFNGKKWEKF--NSEKVATLTYARIQGKTALIAHFQNSSL 836
BLAST of CMJ_chr3_019560.1 vs. Araport11
Match: AT5G61960.6 (| MEI2-like protein 1 | Chr5:24879001-24883553 REVERSE LENGTH=908 | 201606) HSP 1 Score: 88.5817 bits (218), Expect = 4.518e-19 Identity = 48/116 (41.38%), Postives = 61/116 (52.59%), Query Frame = 0 Query: 161 TTLMIKNIPNRFKRHDLLQILDNHCWAENMKSKLHSDPCRSEYDFLYLPMDFCHGANLGYAFVNFTTSVAAVRFAKAFNKSRWEAQVPGNKKTCEISRAAIQGMDALKIHFQEKCF 276 TTLMIKNIPN++ LL +D HC + YDFLYLP+DF + N+GYAF+N V F KAFN +WE ++K ++ A IQG AL HFQ Sbjct: 737 TTLMIKNIPNKYTSKMLLSAIDEHC--------------KGTYDFLYLPIDFKNKCNVGYAFINLIEPEKIVPFFKAFNGKKWEKF--NSEKVATLTYARIQGKTALIAHFQNSSL 836 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_019560.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_019560.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_019560.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_019560.1_cmj_v1 ID=CMJ_chr3_019560.1_cmj_v1; Name=CMJ_chr3_019560.1; organism=Citrus maxima; type=mRNA; length=996bpback to top protein sequence of CMJ_chr3_019560.1_cmj_v1 >CMJ_chr3_019560.1_cmj_v1 ID=CMJ_chr3_019560.1_cmj_v1; Name=CMJ_chr3_019560.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=332bpback to top mRNA from alignment at chr3:36610741..36613222- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2482bp; location=Sequence derived from: chr3:36610741..36613222- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:36610741..36613222- >CMJ_chr3_019560.1_cmj_v1 ID=CMJ_chr3_019560.1_cmj_v1; Name=CMJ_chr3_019560.1; organism=Citrus maxima; type=CDS; length=996bp; location=Sequence derived from: chr3:36610741..36613222- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|