CMJ_chr3_020220.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_020220.1 vs. ExPASy TrEMBL
Match: A0A2H5N5J8|A0A2H5N5J8_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_277330 PE=4 SV=1) HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE Sbjct: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281
BLAST of CMJ_chr3_020220.1 vs. ExPASy TrEMBL
Match: V4T7I4|V4T7I4_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002099mg PE=4 SV=1) HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0 Identity = 280/281 (99.64%), Postives = 280/281 (99.64%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGK LRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE Sbjct: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKSLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281
BLAST of CMJ_chr3_020220.1 vs. ExPASy TrEMBL
Match: A0A6A1V0H5|A0A6A1V0H5_9ROSI (Photosystem II 22 kDa protein, chloroplastic OS=Morella rubra OX=262757 GN=CJ030_MR7G014288 PE=4 SV=1) HSP 1 Score: 417.542 bits (1072), Expect = 4.238e-145 Identity = 233/281 (82.92%), Postives = 245/281 (87.19%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQTMLLMS VSTS G+LKRD L+ FQ Q LRPKPFSHL+ PL SS +AF+T ALFKSKTKA P K VE KPKVEDGIFGTSGG GFTKQNELFVGRVAMIGFAASLLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVDE P+GL AVIPPGK +RSALGLKEGGP+FGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFF AALNPGTGKF+TDE+EE Sbjct: 1 MAQTMLLMSAVSTSRVGDLKRDPLLNFQVQKLRPKPFSHLVLPPLPTNP-------SSPQAFTTFALFKSKTKAAPSKKVVEPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDE--TPSGLEKAVIPPGKSIRSALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFFAALNPGTGKFLTDEEEE 272
BLAST of CMJ_chr3_020220.1 vs. ExPASy TrEMBL
Match: A0A1Q3BVC8|A0A1Q3BVC8_CEPFO (Chloroa_b-bind domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_15463 PE=4 SV=1) HSP 1 Score: 414.075 bits (1063), Expect = 1.191e-143 Identity = 228/281 (81.14%), Postives = 244/281 (86.83%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQTMLLM G+STSH +L+RD L Q Q LRPK FSHL FNPLSN + A + F+T+ALFKSKTKA PK +KPKVEDG+FGTSGG GFTKQNELFVGRVAMIGFAASLLGE +TGKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVD DEPTGL AVIPPGKG+R ALGL+EGGP+FGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFF AALNPGTGKFVTDE+ E Sbjct: 1 MAQTMLLMCGISTSHVVDLRRDPLFHVQIQKLRPKSFSHLFFNPLSNNGFSLA------QKFNTLALFKSKTKAAPKKVATTAKPKVEDGLFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAVTGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVD--DEPTGLERAVIPPGKGIRGALGLREGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFFAALNPGTGKFVTDEEAE 273
BLAST of CMJ_chr3_020220.1 vs. ExPASy TrEMBL
Match: A0A2K3PA05|A0A2K3PA05_TRIPR (Photosystem II 22 kDa protein chloroplastic-like OS=Trifolium pratense OX=57577 GN=L195_g008732 PE=4 SV=1) HSP 1 Score: 412.92 bits (1060), Expect = 2.472e-143 Identity = 220/281 (78.29%), Postives = 241/281 (85.77%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQTMLLMS VS++++ LK+D L+ Q Q LRP+ S + FNPLS+ S SS+ F+T+ALFKSKTKAP K V+ KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAAS+LGE +TGKGILAQLNLETGIPIYEAEPLLLFFI+FTLLGAIGALGDRGKFVD DEPT G VIPPGKG R+ALGL+EGGP+FGFTKSNELFVGRLAQLG FSLIGEIITGKGALAQLNIETG+PI EIEPLVLFNVIFFFVAALNPGTG FV DEDE+ Sbjct: 1 MAQTMLLMSSVSSTYSVELKKDPLLQLQCQRLRPR-ISDVSFNPLSSNS-----KRLSSRTFTTLALFKSKTKAPAKV--VKPKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASILGEALTGKGILAQLNLETGIPIYEAEPLLLFFIIFTLLGAIGALGDRGKFVD--DEPTT--GGVIPPGKGFRAALGLREGGPLFGFTKSNELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPITEIEPLVLFNVIFFFVAALNPGTGTFVKDEDED 269
BLAST of CMJ_chr3_020220.1 vs. ExPASy TrEMBL
Match: A0A5N6RI01|A0A5N6RI01_9ROSI (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016019 PE=4 SV=1) HSP 1 Score: 409.068 bits (1050), Expect = 1.149e-141 Identity = 232/282 (82.27%), Postives = 251/282 (89.01%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNP-LSNESLTAAAASSSSKAFSTVALFKSKTKAP-PKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDE 280 MAQTMLLMSGVSTSH +LKRD+L+ FQ Q LRPK FSHL+ P L +S SSS + F+T ALFKSKTKAP K + ++KPKVEDGIFGTSGG GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVD+P PTGL AV+PPGKGLRSALGLKEGGP+FGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETG+PI+EIEPLVLFNVIFFF AALNPGTG+FVTD+++ Sbjct: 1 MAQTMLLMSGVSTSHVVDLKRDTLLNFQIQKLRPKSFSHLLQLPRLPTDS------SSSPQPFTTFALFKSKTKAPLKKVVEAKAKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVVPPGKGLRSALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGLPISEIEPLVLFNVIFFFFAALNPGTGQFVTDDED 274
BLAST of CMJ_chr3_020220.1 vs. ExPASy TrEMBL
Match: A0A0N7BU01|A0A0N7BU01_PEA (PsbS OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 400.979 bits (1029), Expect = 1.400e-138 Identity = 218/281 (77.58%), Postives = 242/281 (86.12%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQTMLLMS VS++++ L +D L+ Q Q L+P+ FS + F+PLS + + S SS+ F T+ALFKSKTKAP K + KPKVEDG+FGTSGGFGFTKQNELFVGRVAMIGFAAS+LGEGITGKGIL+QLNLETGIPIYEAEPLLLFFI+FTLLGAIGALGDRGKFVD DEPT G VIPPGKG R ALGL EGGP+FGFTKSNELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PINEIEPLVLFNV FFF+AALNPGTGKFVTDE+E+ Sbjct: 1 MAQTMLLMSSVSSTYSVPLNKDPLLQLQCQRLKPR-FSDISFSPLS-----SNSKSFSSRTFKTLALFKSKTKAPAKVVP-KQKPKVEDGVFGTSGGFGFTKQNELFVGRVAMIGFAASILGEGITGKGILSQLNLETGIPIYEAEPLLLFFIIFTLLGAIGALGDRGKFVD--DEPTT--GGVIPPGKGFRQALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVAFFFIAALNPGTGKFVTDEEED 270
BLAST of CMJ_chr3_020220.1 vs. ExPASy TrEMBL
Match: A0A2Z6N806|A0A2Z6N806_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_300570 PE=4 SV=1) HSP 1 Score: 399.053 bits (1024), Expect = 7.793e-138 Identity = 217/281 (77.22%), Postives = 242/281 (86.12%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQTMLLMS VS++++ LK+D L+ Q Q LR + S + FNPLS + + S SS+ F+T+ALFKSKTKAP K V+ KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAAS+LGE +TGKGILAQLNLETGIPIYEAEPLLLFFI+FTLLGAIGALGDRGKFVD DEPT G VIPPGKG R+ALGL+EGGP+FGFTKSNELFVGRLAQLG FSLIGEIITGKGALAQLN+ETG+PI EIEPLVLFNVIFFF+AALNPGTG FVTDE+E+ Sbjct: 1 MAQTMLLMSSVSSTYSVELKKDPLLQLQCQRLRSR-ISDVSFNPLS-----SNSKSLSSRTFTTLALFKSKTKAPAKV--VKPKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASILGEALTGKGILAQLNLETGIPIYEAEPLLLFFIIFTLLGAIGALGDRGKFVD--DEPTT--GGVIPPGKGFRAALGLREGGPLFGFTKSNELFVGRLAQLGFVFSLIGEIITGKGALAQLNVETGVPITEIEPLVLFNVIFFFIAALNPGTGTFVTDEEED 269
BLAST of CMJ_chr3_020220.1 vs. ExPASy TrEMBL
Match: A0A067GYV9|A0A067GYV9_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g0234812mg PE=4 SV=1) HSP 1 Score: 395.586 bits (1015), Expect = 4.443e-137 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGG 201 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGG Sbjct: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGG 201 HSP 2 Score: 78.9518 bits (193), Expect = 1.386e-13 Identity = 49/79 (62.03%), Postives = 59/79 (74.68%), Query Frame = 0 Query: 204 FGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNP--GTGKFVTDEDE 280 FGFTK NELFVGR+A +G A SL+GE ITGKG LAQLN+ETGIPI E EPL+LF ++F + A+ GKFV + DE Sbjct: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDE 176
BLAST of CMJ_chr3_020220.1 vs. ExPASy TrEMBL
Match: A0A2N9HK88|A0A2N9HK88_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40013 PE=4 SV=1) HSP 1 Score: 396.356 bits (1017), Expect = 8.411e-137 Identity = 235/281 (83.63%), Postives = 249/281 (88.61%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQTMLLMS VSTS+ +LKRD L+ FQ Q LRPK FSHL+ PL + SSS+ F+T ALFK+KTKA TKKVE KPKVEDGIFGTSGG GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVDE EPTGL AVI PGKGLRSALGLKEGGP+FGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNV+FFF+AALNPGTGKFVTDE++E Sbjct: 1 MAQTMLLMSSVSTSNVVDLKRDPLLNFQIQKLRPKSFSHLLLPPLPTNT-------SSSQLFTTFALFKAKTKA--PTKKVEPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGQFVDE--EPTGLEKAVISPGKGLRSALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVVFFFIAALNPGTGKFVTDEEKE 270
BLAST of CMJ_chr3_020220.1 vs. ExPASy Swiss-Prot
Match: PSBS_SPIOL (Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSBS PE=1 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 3.157e-123 Identity = 211/284 (74.30%), Postives = 237/284 (83.45%), Query Frame = 0 Query: 1 MAQTMLLM-SGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK--AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQ MLLM GVST++ +LKR++L+ Q Q ++PK + SN + +SSSS F T+ALFKSK KAP K +K K KVEDG+FGTSGG GFTK+NELFVGRVAMIGFAASLLGEGITGKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVDEP TGL AVIPPGK +RSALGLK GP+FGFTKSNELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PINEIEPLVL NV+FFF+AA+NPGTGKF+TD++EE Sbjct: 1 MAQAMLLMMPGVSTTNTIDLKRNALLKLQIQKIKPK-------SSTSNLFFSPLPSSSSSSSTVFKTLALFKSKAKAPKKVEK--PKLKVEDGLFGTSGGIGFTKENELFVGRVAMIGFAASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEPT--TGLEKAVIPPGKDVRSALGLKTKGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAINPGTGKFITDDEEE 273
BLAST of CMJ_chr3_020220.1 vs. ExPASy Swiss-Prot
Match: PSBS1_ORYSJ (Photosystem II 22 kDa protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PSBS1 PE=1 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 3.035e-118 Identity = 207/285 (72.63%), Postives = 228/285 (80.00%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALF-KSKTKAPPKTKKVESKPK--VEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEP-TGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQ+ML+ T A + R Q +RP PFS L+ LS S + A S TVALF +SKTKA P +K E KPK EDGIFGTSGG GFTK+NELFVGRVAM+GFAAS+LGE ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG FVD D+P TGL AVI PGKG RSALGL EGGP+FGFTK+NELFVGRLAQLGIAFS+IGEIITGKGALAQLNIETG+PINEIEPLVLFNV+FFF+AA+NPGTGKFV+D+DEE Sbjct: 1 MAQSMLVSGANGTVAAASTSR-------LQPVRPTPFSRLV---LSQPSSSLGRAVS----VKTVALFGRSKTKAAP-ARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVD--DQPVTGLDKAVIAPGKGFRSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPINEIEPLVLFNVVFFFIAAINPGTGKFVSDDDEE 268
BLAST of CMJ_chr3_020220.1 vs. ExPASy Swiss-Prot
Match: PSBS1_ORYSI (Photosystem II 22 kDa protein 1, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=PSBS1 PE=1 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 3.035e-118 Identity = 207/285 (72.63%), Postives = 228/285 (80.00%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALF-KSKTKAPPKTKKVESKPK--VEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEP-TGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQ+ML+ T A + R Q +RP PFS L+ LS S + A S TVALF +SKTKA P +K E KPK EDGIFGTSGG GFTK+NELFVGRVAM+GFAAS+LGE ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG FVD D+P TGL AVI PGKG RSALGL EGGP+FGFTK+NELFVGRLAQLGIAFS+IGEIITGKGALAQLNIETG+PINEIEPLVLFNV+FFF+AA+NPGTGKFV+D+DEE Sbjct: 1 MAQSMLVSGANGTVAAASTSR-------LQPVRPTPFSRLV---LSQPSSSLGRAVS----VKTVALFGRSKTKAAP-ARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVD--DQPVTGLDKAVIAPGKGFRSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPINEIEPLVLFNVVFFFIAAINPGTGKFVSDDDEE 268
BLAST of CMJ_chr3_020220.1 vs. ExPASy Swiss-Prot
Match: PSBS_TOBAC (Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSBS PE=2 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 5.532e-113 Identity = 205/281 (72.95%), Postives = 229/281 (81.49%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQTMLL + ++SLV + L+PKP S L + +A+A++SS +TVALFKSK KAP K + K KVEDGIFGTSGG GFTKQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGAL DRGKF+D+P PTGL AVIPPGKG +SALGL EGGP+F FTK+NELFVGRLAQLGIAFS+IGEIITGKGALAQLN ETG+PINEIEPL+LFN++FFFVAA+NPGTGKFVTDE+EE Sbjct: 1 MAQTMLLTANAKVDLR---SKESLV----ERLKPKPLSSFFLPSLPLKYPSASASASSHFTSTTVALFKSKAKAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGLDKAVIPPGKGFKSALGLSEGGPLFEFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274
BLAST of CMJ_chr3_020220.1 vs. ExPASy Swiss-Prot
Match: PSBS_ARATH (Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBS PE=2 SV=1) HSP 1 Score: 322.398 bits (825), Expect = 3.724e-110 Identity = 206/282 (73.05%), Postives = 225/282 (79.79%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVES-KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQTMLL SGV+ H + ++ + +PK H +F LS S A S ++F +ALFK KTKA KKVE K KVEDGIFGTSGG GFTK NELFVGRVAMIGFAASLLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVD+P PTGL AVIPPGK +RSALGLKE GP+FGFTK+NELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPI +IEPLVL NV FFF AA+NPG GKF+TD+ EE Sbjct: 1 MAQTMLLTSGVTAGH--------FLRNKSPLAQPK--VHHLF--LSGNS--PVALPSRRQSFVPLALFKPKTKA--APKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264
BLAST of CMJ_chr3_020220.1 vs. ExPASy Swiss-Prot
Match: PSBS_SOLLC (Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PSBS PE=3 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 6.268e-104 Identity = 207/288 (71.88%), Postives = 229/288 (79.51%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFST-VALFKSKTK------APPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQTMLL + ++SLV + L+PKP S L L +++ +SSSK ST VALFKSK K APPK K+ KVEDGIFGTSGG GFTKQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRGKFVD+P PTGL AVIPPGK +SALGL EGGP+FGFTK+NELFVGRLAQLGIAFS+IGEIITGKGALAQLN ETG+PINEIEPL+LFN+ FFF AA+NPGTGKF+TDE+E+ Sbjct: 1 MAQTMLLTANAKVDLR---SKESLV----ERLKPKPLSSLFLPSLPLRFSSSSTNASSSKFTSTTVALFKSKAKAPPKKVAPPKEKQ-----KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDDPTPPTGLEKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276
BLAST of CMJ_chr3_020220.1 vs. ExPASy Swiss-Prot
Match: PSBS2_ORYSJ (Photosystem II 22 kDa protein 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PSBS2 PE=2 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 1.671e-103 Identity = 180/223 (80.72%), Postives = 200/223 (89.69%), Query Frame = 0 Query: 60 KAFSTVALFKSKTKAPPKTKKV-ESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 K VA FKS+TKA PK K ++K VEDGIFGTSGG GFTK+NELFVGRVAM+GFAASLLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVD+ TGL AVIPPGKG R+ALGL EGGP+FGFTK+NELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETG+PINEIEPL+LFN++FFF AA+NPGTGKFVTD++++ Sbjct: 34 KHLVVVAAFKSRTKASPKVDKSNKNKSIVEDGIFGTSGGIGFTKENELFVGRVAMLGFAASLLGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDDA---TGLERAVIPPGKGFRAALGLSEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGVPINEIEPLLLFNILFFFFAAINPGTGKFVTDDNDD 253
BLAST of CMJ_chr3_020220.1 vs. ExPASy Swiss-Prot
Match: PSBS2_ORYSI (Photosystem II 22 kDa protein 2, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=PSBS2 PE=3 SV=2) HSP 1 Score: 305.064 bits (780), Expect = 1.823e-103 Identity = 180/223 (80.72%), Postives = 200/223 (89.69%), Query Frame = 0 Query: 60 KAFSTVALFKSKTKAPPKTKKV-ESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 K VA FKS+TKA PK K ++K VEDGIFGTSGG GFTK+NELFVGRVAM+GFAASLLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVD+ TGL AVIPPGKG R+ALGL EGGP+FGFTK+NELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETG+PINEIEPL+LFN++FFF AA+NPGTGKFVTD++++ Sbjct: 34 KHLVVVAAFKSRTKASPKVDKSNKNKSIVEDGIFGTSGGIGFTKENELFVGRVAMLGFAASLLGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDDA---TGLERAVIPPGKGFRAALGLSEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGVPINEIEPLLLFNILFFFFAAINPGTGKFVTDDNDD 253
BLAST of CMJ_chr3_020220.1 vs. ExPASy Swiss-Prot
Match: PSBS_SOLSG (Photosystem II 22 kDa protein, chloroplastic OS=Solanum sogarandinum OX=52705 GN=PSBS PE=2 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 1.733e-102 Identity = 204/288 (70.83%), Postives = 226/288 (78.47%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFST-VALFKSKTK------APPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQTMLL + ++SLV + L+PKP S L L ++ SSSK ST VALFKSK K APPK K+ KVEDGIFGTSGG GFTKQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG+F+D+P TGL AVIPPGK +SALGL EGGP+FGFTK+NELFVGRLAQLGIAFS+IGEIITGKGALAQLN ETG+PINEIEPL+LFN+ FFF AA+NPGTGKF+TDE+E+ Sbjct: 1 MAQTMLLTANAKVDLR---SKESLV----ERLKPKPLSSLFLPSLPLRFSSSTTNFSSSKFTSTTVALFKSKAKAPPKKVAPPKEKQ-----KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFIDDPAPATGLEKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276
BLAST of CMJ_chr3_020220.1 vs. ExPASy Swiss-Prot
Match: PSBS1_CHLRE (Photosystem II protein PSBS1 OS=Chlamydomonas reinhardtii OX=3055 GN=PSBS1 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.669e-41 Identity = 108/254 (42.52%), Postives = 143/254 (56.30%), Query Frame = 0 Query: 54 AASSSSKAFS---------TVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGF--------------GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKE-----GGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDED 279 A + S+KAF+ TV ++ + TK PK + SK +VE F + G GFTK NELFVGR+AM+GF+ASL+GE +TGKG LAQ ETG+ E + L++ I F L+ A+ L FV E + + P G + L E G FGFTK NELFVGR AQLG AFSLIGE +TGKGALAQ +IETG+ + + E ++ ++F AA+N G+GKFV +E Sbjct: 2 AMTLSTKAFAQRGVSARKNTVRVYAASTKVNPK---LASKTEVER--FKQATGLPAPAINGKQFPLKLGFTKTNELFVGRLAMVGFSASLIGEILTGKGALAQFGYETGLNGIEVDGLVIGLIAFNLIAAV--LPTSQTFVPEEQDTI----SERPAGPLQDPRITLLEPKKFFGVQGFGFTKENELFVGRAAQLGFAFSLIGEAVTGKGALAQFDIETGLSLRDTEFGLVVFILFLLFAAINEGSGKFVDEES 244 HSP 2 Score: 75.485 bits (184), Expect = 7.134e-15 Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0 Query: 205 GFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDE 280 GFTK+NELFVGRLA +G + SLIGEI+TGKGALAQ ETG+ E++ LV+ + F +AA+ P + FV +E + Sbjct: 65 GFTKTNELFVGRLAMVGFSASLIGEILTGKGALAQFGYETGLNGIEVDGLVIGLIAFNLIAAVLPTSQTFVPEEQD 140
BLAST of CMJ_chr3_020220.1 vs. Araport11
Match: AT1G44575.3 (| Chlorophyll A-B binding family protein | Chr1:16871768-16873194 FORWARD LENGTH=265 | 201606) HSP 1 Score: 322.398 bits (825), Expect = 3.810e-111 Identity = 206/282 (73.05%), Postives = 225/282 (79.79%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVES-KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQTMLL SGV+ H + ++ + +PK H +F LS S A S ++F +ALFK KTKA KKVE K KVEDGIFGTSGG GFTK NELFVGRVAMIGFAASLLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVD+P PTGL AVIPPGK +RSALGLKE GP+FGFTK+NELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPI +IEPLVL NV FFF AA+NPG GKF+TD+ EE Sbjct: 1 MAQTMLLTSGVTAGH--------FLRNKSPLAQPK--VHHLF--LSGNS--PVALPSRRQSFVPLALFKPKTKA--APKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264
BLAST of CMJ_chr3_020220.1 vs. Araport11
Match: AT1G44575.1 (| Chlorophyll A-B binding family protein | Chr1:16871768-16873194 FORWARD LENGTH=265 | 201606) HSP 1 Score: 322.398 bits (825), Expect = 3.810e-111 Identity = 206/282 (73.05%), Postives = 225/282 (79.79%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVES-KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 281 MAQTMLL SGV+ H + ++ + +PK H +F LS S A S ++F +ALFK KTKA KKVE K KVEDGIFGTSGG GFTK NELFVGRVAMIGFAASLLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVD+P PTGL AVIPPGK +RSALGLKE GP+FGFTK+NELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPI +IEPLVL NV FFF AA+NPG GKF+TD+ EE Sbjct: 1 MAQTMLLTSGVTAGH--------FLRNKSPLAQPK--VHHLF--LSGNS--PVALPSRRQSFVPLALFKPKTKA--APKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264
BLAST of CMJ_chr3_020220.1 vs. Araport11
Match: AT1G44575.2 (| Chlorophyll A-B binding family protein | Chr1:16871768-16872548 FORWARD LENGTH=205 | 201606) HSP 1 Score: 189.119 bits (479), Expect = 1.077e-59 Identity = 138/202 (68.32%), Postives = 151/202 (74.75%), Query Frame = 0 Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVES-KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGG 201 MAQTMLL SGV+ H + ++ + +PK H +F LS S A S ++F +ALFK KTKA KKVE K KVEDGIFGTSGG GFTK NELFVGRVAMIGFAASLLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVD+P PTGL AVIPPGK +RSALGLKE G Sbjct: 1 MAQTMLLTSGVTAGH--------FLRNKSPLAQPK--VHHLF--LSGNS--PVALPSRRQSFVPLALFKPKTKA--APKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSALGLKEQG 184 HSP 2 Score: 74.7146 bits (182), Expect = 7.145e-16 Identity = 46/75 (61.33%), Postives = 57/75 (76.00%), Query Frame = 0 Query: 205 GFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNP--GTGKFVTD 277 GFTK+NELFVGR+A +G A SL+GE +TGKG LAQLN+ETGIPI E EPL+LF ++F + A+ GKFV D Sbjct: 84 GFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD 158 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_020220.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_020220.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_020220.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_020220.1_cmj_v1 ID=CMJ_chr3_020220.1_cmj_v1; Name=CMJ_chr3_020220.1; organism=Citrus maxima; type=mRNA; length=846bpback to top protein sequence of CMJ_chr3_020220.1_cmj_v1 >CMJ_chr3_020220.1_cmj_v1 ID=CMJ_chr3_020220.1_cmj_v1; Name=CMJ_chr3_020220.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=282bpback to top mRNA from alignment at chr3:37011825..37014164- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2340bp; location=Sequence derived from: chr3:37011825..37014164- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:37011825..37014164- >CMJ_chr3_020220.1_cmj_v1 ID=CMJ_chr3_020220.1_cmj_v1; Name=CMJ_chr3_020220.1; organism=Citrus maxima; type=CDS; length=846bp; location=Sequence derived from: chr3:37011825..37014164- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|