CMJ_chr3_022290.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_022290.1 vs. ExPASy TrEMBL
Match: V4V6Q2|V4V6Q2_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002747mg PE=3 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 7.039e-102 Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0 Query: 1 MSEEKHHHHGLFHHHKEHEKPEGATGYSDSTTGYSDQSATAYSETTGYPGDRRRPSETESGDYGRKEEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGLGGFAFHEHHEKKEAKEEDEEAHGKKHHHLF 158
MSEEKHHHHGLFHHHKEHEKPEGATGYSDSTTGYSDQSATAYSETTGYPGDR RPSETESGDYGRKEEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGLGGFAFHEHHEKKEAKEEDEEAHGKKHHHLF
Sbjct: 1 MSEEKHHHHGLFHHHKEHEKPEGATGYSDSTTGYSDQSATAYSETTGYPGDRCRPSETESGDYGRKEEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGLGGFAFHEHHEKKEAKEEDEEAHGKKHHHLF 158
BLAST of CMJ_chr3_022290.1 vs. ExPASy TrEMBL
Match: V4SJ40|V4SJ40_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002749mg PE=3 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 6.181e-101 Identity = 156/158 (98.73%), Postives = 156/158 (98.73%), Query Frame = 0 Query: 1 MSEEKHHHHGLFHHHKEHEKPEGATGYSDSTTGYSDQSATAYSETTGYPGDRRRPSETESGDYGRKEEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGLGGFAFHEHHEKKEAKEEDEEAHGKKHHHLF 158
MSEEKHHHHGLFHHHKEHEKPEGATGYSDSTTGYSDQSATAYSETTGYPGDR RPSETESGDYGRKEEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVG GGFAFHEHHEKKEAKEEDEEAHGKKHHHLF
Sbjct: 1 MSEEKHHHHGLFHHHKEHEKPEGATGYSDSTTGYSDQSATAYSETTGYPGDRCRPSETESGDYGRKEEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGSGGFAFHEHHEKKEAKEEDEEAHGKKHHHLF 158
BLAST of CMJ_chr3_022290.1 vs. ExPASy TrEMBL
Match: K9JG59|K9JG59_CITSI (Abscisic acid stress ripening-related protein OS=Citrus sinensis OX=2711 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 1.195e-77 Identity = 154/179 (86.03%), Postives = 155/179 (86.59%), Query Frame = 0 Query: 1 MSEEKHHHHGLFHHHKEHEKPEGATGYSD---------------------STTGYSDQSATAYSETTGYPGDRRRPSETESGDYGRKEEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGLGGFAFHEHHEKKEAKEEDEEAHGKKHHHLF 158
MSEEKHHHHGLFHHHKEHEKPEGATGYSD STTGYSDQSAT YSETTGYPGDRRRPSETESGDYGRKEEE DYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVG GGFAFHEHHEKKEAKEED+EAHGKKHHHLF
Sbjct: 1 MSEEKHHHHGLFHHHKEHEKPEGATGYSDTATGYSDTATGYSDTPTGYSDSTTGYSDQSATDYSETTGYPGDRRRPSETESGDYGRKEEEFDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGSGGFAFHEHHEKKEAKEEDQEAHGKKHHHLF 179
BLAST of CMJ_chr3_022290.1 vs. ExPASy TrEMBL
Match: A0A2H5QYB1|A0A2H5QYB1_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_289930 PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 6.963e-71 Identity = 112/121 (92.56%), Postives = 114/121 (94.21%), Query Frame = 0 Query: 13 HHHKEHEKPEGATGYSDSTTGYSDQSATAYSETTGYPGDRRRPSETESGDYGRKEEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGLGGFAF 133
HHHKEHEKPEGATGYSDSTTGYSDQSATAYSETTGYPGDR RPSETESGDYGRKEEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAA+ +G
Sbjct: 1 HHHKEHEKPEGATGYSDSTTGYSDQSATAYSETTGYPGDRCRPSETESGDYGRKEEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAASRWIGRICV 121
BLAST of CMJ_chr3_022290.1 vs. ExPASy TrEMBL
Match: V4T3I6|V4T3I6_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002644mg PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 4.123e-60 Identity = 147/179 (82.12%), Postives = 150/179 (83.80%), Query Frame = 0 Query: 1 MSEEKHHHHGLFHHHKEHEKPEGATGYSDS---------------------TTGYSDQSATAYSETTGYPGDRRRPSETESGDYGRKEEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGLGGFAFHEHHEKKEAKEEDEEAHGKKHHHLF 158
MSEEKHH HGLFHHHKEHEKPEG TGYSD+ TTGYSDQSAT YSETTGYPGDRRRPSE ESG+YGRKEEE DYKKEEKHHKHLEH+GELGT AGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVG GGFAFHEHHEKKEAKEEDEEAHGKKHHHLF
Sbjct: 1 MSEEKHHQHGLFHHHKEHEKPEGTTGYSDTVTGYSDTATGYSDTPTGYSDLTTGYSDQSATDYSETTGYPGDRRRPSEMESGEYGRKEEEFDYKKEEKHHKHLEHVGELGTGAAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGSGGFAFHEHHEKKEAKEEDEEAHGKKHHHLF 179
BLAST of CMJ_chr3_022290.1 vs. ExPASy TrEMBL
Match: A0A2P2NFK7|A0A2P2NFK7_RHIMU (Uncharacterized protein LOC106768000 OS=Rhizophora mucronata OX=61149 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.368e-51 Identity = 99/142 (69.72%), Postives = 109/142 (76.76%), Query Frame = 0 Query: 24 ATGYSDSTTGYSDQSA-TAYSETTGYPGDRRRPSET------ESGDYGRKEEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGLGGFAFHEHHEKKEAKEEDEEAHGKKHHHLF 158
A YS++ TGY++ S+ SE T Y D + SE+ SG E EVDY+KEEKHHKHLEHLGELGTA AGAFAL EKHKAEKDP+HAHRHK+EEEIAAA AVG GGFAFHEHHEKKEAKE DEEAHGKKHHHLF
Sbjct: 60 ANRYSETGTGYNNPSSYNKNSEDTAYYSDANKYSESGETTKYSSGGPAVDESEVDYRKEEKHHKHLEHLGELGTAAAGAFALHEKHKAEKDPDHAHRHKVEEEIAAAVAVGSGGFAFHEHHEKKEAKEHDEEAHGKKHHHLF 201
BLAST of CMJ_chr3_022290.1 vs. ExPASy TrEMBL
Match: A0A067H7T9|A0A067H7T9_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g0333542mg PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.289e-45 Identity = 96/120 (80.00%), Postives = 97/120 (80.83%), Query Frame = 0 Query: 1 MSEEKHHHHGLFHHHKEHEKPEGATGYSD---------------------STTGYSDQSATAYSETTGYPGDRRRPSETESGDYGRKEEEVDYKKEEKHHKHLEHLGELGTAGAGAFALL 99
MSEEKHHHHGLFHHHKEHEKPEGATGYSD STTGYSDQSAT YSETTGYPGDRRRPSETESGDYGRKEEE DYKKEEKHHKHLEHLGELGTAGAGAFAL+
Sbjct: 1 MSEEKHHHHGLFHHHKEHEKPEGATGYSDTATGYSDTATGYSDTPTGYSDSTTGYSDQSATDYSETTGYPGDRRRPSETESGDYGRKEEEFDYKKEEKHHKHLEHLGELGTAGAGAFALV 120
BLAST of CMJ_chr3_022290.1 vs. ExPASy TrEMBL
Match: A0A0B2EW11|A0A0B2EW11_9BACL (Uncharacterized protein (Fragment) OS=Paenibacillus sp. IHB B 3415 OX=867080 GN=QW71_36225 PE=4 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.942e-38 Identity = 72/92 (78.26%), Postives = 80/92 (86.96%), Query Frame = 0 Query: 67 EEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGLGGFAFHEHHEKKEAKEEDEEAHGKKHHHLF 158
EE DY+KE K HKH EHLGELG AG FAL EKH+++KDPEHAH+HKIEEEIAA AAVG GG+AFHEHHEKK+AKEEDEE+HGKKHHHLF
Sbjct: 99 EETPDYEKEVKQHKHREHLGELGAVAAGTFALYEKHQSKKDPEHAHKHKIEEEIAAVAAVGSGGYAFHEHHEKKDAKEEDEESHGKKHHHLF 190
BLAST of CMJ_chr3_022290.1 vs. ExPASy TrEMBL
Match: W6E7F6|W6E7F6_CAMSI (Abscisic stress-ripening protein ASR OS=Camellia sinensis OX=4442 GN=ASR PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.620e-38 Identity = 72/92 (78.26%), Postives = 80/92 (86.96%), Query Frame = 0 Query: 67 EEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGLGGFAFHEHHEKKEAKEEDEEAHGKKHHHLF 158
EE DY+KE K HKH EHLGELG AG FAL EKH+++KDPEHAH+HKIEEEIAA AAVG GG+AFHEHHEKK+AKEEDEE+HGKKHHHLF
Sbjct: 90 EETPDYEKEVKQHKHREHLGELGAVAAGTFALYEKHQSKKDPEHAHKHKIEEEIAAVAAVGSGGYAFHEHHEKKDAKEEDEESHGKKHHHLF 181
BLAST of CMJ_chr3_022290.1 vs. ExPASy TrEMBL
Match: A0A4S4EGZ0|A0A4S4EGZ0_CAMSI (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_014022 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.350e-37 Identity = 71/92 (77.17%), Postives = 80/92 (86.96%), Query Frame = 0 Query: 67 EEEVDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGLGGFAFHEHHEKKEAKEEDEEAHGKKHHHLF 158
EE D++KE K HKH EHLGELG AG FAL EKH+++KDPEHAH+HKIEEEIAA AAVG GG+AFHEHHEKK+AKEEDEE+HGKKHHHLF
Sbjct: 90 EETPDFEKEVKQHKHREHLGELGAVAAGTFALYEKHQSKKDPEHAHKHKIEEEIAAVAAVGSGGYAFHEHHEKKDAKEEDEESHGKKHHHLF 181
BLAST of CMJ_chr3_022290.1 vs. ExPASy Swiss-Prot
Match: ASR2_SOLLC (Abscisic stress-ripening protein 2 OS=Solanum lycopersicum OX=4081 GN=ASR2 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.773e-20 Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 0 Query: 70 VDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGLGGFAFHEHHE 138
VDY+KE KHH HLE +GELG AGA AL EKHKA+KDPEHAH+HKIEEEI A AAVG GGFAFHEHH+
Sbjct: 25 VDYEKEVKHHSHLEKIGELGAVAAGALALHEKHKAKKDPEHAHKHKIEEEIMAVAAVGAGGFAFHEHHQ 93
BLAST of CMJ_chr3_022290.1 vs. ExPASy Swiss-Prot
Match: ASR1_SOLLC (Abscisic stress-ripening protein 1 OS=Solanum lycopersicum OX=4081 GN=ASR1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.906e-18 Identity = 55/68 (80.88%), Postives = 62/68 (91.18%), Query Frame = 0 Query: 70 VDYKKEEKHHKHLEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGLGGFAFHEHH 137
VDY+KE KHHKHLE +G+LGT AGA+AL EKH+A+KDPEHAH+HKIEEEIAAAAAVG GGFAFHEHH
Sbjct: 23 VDYEKEIKHHKHLEQIGKLGTVAAGAYALHEKHEAKKDPEHAHKHKIEEEIAAAAAVGAGGFAFHEHH 90
BLAST of CMJ_chr3_022290.1 vs. ExPASy Swiss-Prot
Match: ASR3_SOLLC (Abscisic stress-ripening protein 3 OS=Solanum lycopersicum OX=4081 GN=ASR3 PE=3 SV=2) HSP 1 Score: 56.6102 bits (135), Expect = 7.193e-10 Identity = 41/57 (71.93%), Postives = 50/57 (87.72%), Query Frame = 0 Query: 82 LEHLGELGTAGAGAFALLEKHKAEKDPEHAHRHKIEEEIAAAAAVGLGGFAFHEHHE 138
L+ +GELG AGA+AL EKHKA+KDPE+AH+HKI++EIAA AAVG GGFAFHEHH+
Sbjct: 35 LQKIGELGAVAAGAYALHEKHKAKKDPENAHKHKIKQEIAAVAAVGAGGFAFHEHHQ 91 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_022290.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_022290.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 3 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_022290.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_022290.1_cmj_v1 ID=CMJ_chr3_022290.1_cmj_v1; Name=CMJ_chr3_022290.1; organism=Citrus maxima; type=mRNA; length=477bpback to top protein sequence of CMJ_chr3_022290.1_cmj_v1 >CMJ_chr3_022290.1_cmj_v1 ID=CMJ_chr3_022290.1_cmj_v1; Name=CMJ_chr3_022290.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=159bpback to top mRNA from alignment at chr3:38407548..38408319+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=772bp; location=Sequence derived from: chr3:38407548..38408319+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:38407548..38408319+ >CMJ_chr3_022290.1_cmj_v1 ID=CMJ_chr3_022290.1_cmj_v1; Name=CMJ_chr3_022290.1; organism=Citrus maxima; type=CDS; length=477bp; location=Sequence derived from: chr3:38407548..38408319+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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