CMJ_chr3_022370.2
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_022370.2 vs. ExPASy TrEMBL
Match: A0A067GW05|A0A067GW05_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g025146mg PE=4 SV=1) HSP 1 Score: 457.603 bits (1176), Expect = 8.323e-162 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 Query: 1 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI Sbjct: 1 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223
BLAST of CMJ_chr3_022370.2 vs. ExPASy TrEMBL
Match: V4V6R2|V4V6R2_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002223mg PE=4 SV=1) HSP 1 Score: 452.595 bits (1163), Expect = 8.238e-160 Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0 Query: 1 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHP LGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI Sbjct: 1 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPCLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223
BLAST of CMJ_chr3_022370.2 vs. ExPASy TrEMBL
Match: A0A2H5NHW5|A0A2H5NHW5_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_046900 PE=4 SV=1) HSP 1 Score: 436.802 bits (1122), Expect = 1.153e-153 Identity = 217/223 (97.31%), Postives = 217/223 (97.31%), Query Frame = 0 Query: 1 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSK VVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI Sbjct: 1 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSKN-----VVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 218
BLAST of CMJ_chr3_022370.2 vs. ExPASy TrEMBL
Match: A0A5C7H855|A0A5C7H855_9ROSI (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022442 PE=4 SV=1) HSP 1 Score: 435.647 bits (1119), Expect = 4.547e-153 Identity = 209/223 (93.72%), Postives = 220/223 (98.65%), Query Frame = 0 Query: 1 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 MAE+KE+TSSSLSQGLTPHDP+DVPKSPP SPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFL+TWWFIEFVDSFFSPIYARLGV+IFGLGFLTSILFIFFVG+FASSWLG+TVFWLGEWFIKR+PFMKHIYSASKQIS+AISPDQNT+AFKEVAII HPR GEYAFGFITSSVVLQRD+GDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI Sbjct: 1 MAEDKEATSSSLSQGLTPHDPDDVPKSPPQSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLITWWFIEFVDSFFSPIYARLGVDIFGLGFLTSILFIFFVGMFASSWLGSTVFWLGEWFIKRMPFMKHIYSASKQISSAISPDQNTNAFKEVAIICHPRRGEYAFGFITSSVVLQRDNGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223
BLAST of CMJ_chr3_022370.2 vs. ExPASy TrEMBL
Match: D7KMW2|D7KMW2_ARALL (Uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_473756 PE=4 SV=1) HSP 1 Score: 406.371 bits (1043), Expect = 1.766e-141 Identity = 192/224 (85.71%), Postives = 212/224 (94.64%), Query Frame = 0 Query: 1 MAEEKESTSSSLSQGLTPH-DPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 MAE+KE+T+SSLSQGLTPH DPED PKSPP+SPNSSTRKACY VLQSWVSKKFMTG VVLFPVAVTFL+TWWFI+FVD FFSPIY LGV+IFGLGF+TS+LF FFVG+FASSWLG+TVFWLGE FI+R+PF+KHIYSASKQIS AISPDQNT+AFKEVAIIRHPR+GEYAFGFITSSV LQ DHG+EELCSVYVPTNHLYIGD+FLV+SEEIIRPNLS+REGI Sbjct: 1 MAEDKEATTSSLSQGLTPHQDPEDAPKSPPNSPNSSTRKACYGVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYENLGVDIFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREGI 224
BLAST of CMJ_chr3_022370.2 vs. ExPASy TrEMBL
Match: A0A6D2IH77|A0A6D2IH77_9BRAS (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS11633 PE=4 SV=1) HSP 1 Score: 405.601 bits (1041), Expect = 2.556e-141 Identity = 189/223 (84.75%), Postives = 212/223 (95.07%), Query Frame = 0 Query: 1 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 MAE+KE+T+SSLSQGLTP DPED PKSPP+SPNSSTRKACYAVLQSWVSKKFMTG VVLFPVAVTFL+TWWFI+FVD FFSPIY LGV+IFGLGF+TS+LF FF+GVFASSWLG+TVFWLGE FI+++PF++H+YSASKQIS AISPDQNT+AFKEVAIIRHPR+GEYAFGFITSSV LQ DHG+EELCSVYVPTNHLYIGD+FLV+SEEIIRPNLS+REGI Sbjct: 1 MAEDKEATTSSLSQGLTPQDPEDAPKSPPNSPNSSTRKACYAVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYESLGVDIFGLGFVTSVLFTFFIGVFASSWLGSTVFWLGEQFIRKMPFVRHLYSASKQISTAISPDQNTTAFKEVAIIRHPRVGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREGI 223
BLAST of CMJ_chr3_022370.2 vs. ExPASy TrEMBL
Match: A0A1J3E2N2|A0A1J3E2N2_NOCCA (Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=GA_TR5341_c0_g1_i1_g.17178 PE=4 SV=1) HSP 1 Score: 405.216 bits (1040), Expect = 4.338e-141 Identity = 189/223 (84.75%), Postives = 212/223 (95.07%), Query Frame = 0 Query: 1 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 MAE+KE+T+SSLSQGLTP DPED PKSPP+SPNSSTRKACYAVLQSWVSKKFMTG VVLFPVAVTFL+TWWFI+FVD FFSPIY LGV+IFGLGF+TS+LF FF+G+FASSWLG+TVFWLGE FI+R+PF++H+YSASKQIS AISPDQNT+AFKEVAIIRHPR+GEYAFGFITSSV LQ DHG+EELCSVYVPTNHLYIGD+FLV+SEEIIRPNLS+REGI Sbjct: 1 MAEDKEATTSSLSQGLTPQDPEDAPKSPPNSPNSSTRKACYAVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYESLGVDIFGLGFVTSVLFTFFIGIFASSWLGSTVFWLGEQFIRRMPFVRHLYSASKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVKLQTDHGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREGI 223
BLAST of CMJ_chr3_022370.2 vs. ExPASy TrEMBL
Match: A0A3P6BAR3|A0A3P6BAR3_BRACM (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA08T32654Z PE=4 SV=1) HSP 1 Score: 404.445 bits (1038), Expect = 9.421e-141 Identity = 190/223 (85.20%), Postives = 209/223 (93.72%), Query Frame = 0 Query: 1 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 MAE+KE+T+SSLSQGL P DPED PKSPP SPNSSTRKACYAVLQSWVSKKFMTG VVLFPVAVTFL+TWWFI+FVD FFSPIY LGV+IFGLGF+TS+LF FFVG+FASSWLG+TVFWLGE FIKR+PF++H+YSASKQ+S AISPDQNT+AFKEVAIIRHPR+GEYAFGFITSSV LQ D G+EELCSVYVPTNHLYIGDIFLVNSEEIIRPNLS+REGI Sbjct: 1 MAEDKEATTSSLSQGLAPQDPEDPPKSPPTSPNSSTRKACYAVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYESLGVDIFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIKRMPFVRHLYSASKQVSTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDQGEEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGI 223
BLAST of CMJ_chr3_022370.2 vs. ExPASy TrEMBL
Match: A0A1J3IMB6|A0A1J3IMB6_NOCCA (Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=MP_TR10180_c0_g1_i1_g.31084 PE=4 SV=1) HSP 1 Score: 405.216 bits (1040), Expect = 1.409e-140 Identity = 189/223 (84.75%), Postives = 212/223 (95.07%), Query Frame = 0 Query: 1 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 MAE+KE+T+SSLSQGLTP DPED PKSPP+SPNSSTRKACYAVLQSWVSKKFMTG VVLFPVAVTFL+TWWFI+FVD FFSPIY LGV+IFGLGF+TS+LF FF+G+FASSWLG+TVFWLGE FI+R+PF++H+YSASKQIS AISPDQNT+AFKEVAIIRHPR+GEYAFGFITSSV LQ DHG+EELCSVYVPTNHLYIGD+FLV+SEEIIRPNLS+REGI Sbjct: 36 MAEDKEATTSSLSQGLTPQDPEDAPKSPPNSPNSSTRKACYAVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYESLGVDIFGLGFVTSVLFTFFIGIFASSWLGSTVFWLGEQFIRRMPFVRHLYSASKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVKLQTDHGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREGI 258
BLAST of CMJ_chr3_022370.2 vs. ExPASy TrEMBL
Match: A0A078IF94|A0A078IF94_BRANA (BnaCnng15540D protein OS=Brassica napus OX=3708 GN=BnaCnng15540D PE=4 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 1.526e-140 Identity = 189/223 (84.75%), Postives = 209/223 (93.72%), Query Frame = 0 Query: 1 MAEEKESTSSSLSQGLTPHDPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 MAE+KE+T+SSLSQGL P DPED PKSPP SPNSSTRKACYAVLQSWVSKKFMTG VVLFPVAVTFL+TWWFI+FVD FFSPIY LGV+IFGLGF+TS+LF FFVG+FASSWLG+TVFWLGE FIKR+PF++H+YSASKQ+S AISPDQNT+AFKEVAIIRHPR+GEYAFGFITSSV LQ D G+EELCSVYVPTNHLYIGD+FLVNSEEIIRPNLS+REGI Sbjct: 1 MAEDKEATTSSLSQGLAPQDPEDPPKSPPTSPNSSTRKACYAVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYESLGVDIFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIKRMPFVRHLYSASKQVSTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDQGEEELCSVYVPTNHLYIGDVFLVNSEEIIRPNLSIREGI 223
BLAST of CMJ_chr3_022370.2 vs. ExPASy Swiss-Prot
Match: LCV2_ARATH (Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1) HSP 1 Score: 403.675 bits (1036), Expect = 5.820e-143 Identity = 191/224 (85.27%), Postives = 211/224 (94.20%), Query Frame = 0 Query: 1 MAEEKESTSSSLSQGLTPH-DPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 MAE KE+T+SSLSQGLTPH DP+D PKSPP+SPNSSTRKACY VLQSWVSKKFMTG VVLFPVAVTFL+TWWFI+FVD FFSPIY LGV+IFGLGF+TS+LF FFVG+FASSWLG+TVFWLGE FI+R+PF+KHIYSASKQIS AISPDQNT+AFKEVAIIRHPR+GEYAFGFITSSV LQ DHG+EELCSVYVPTNHLYIGD+FLV+SEEIIRPNLS+REGI Sbjct: 1 MAEGKEATTSSLSQGLTPHQDPDDAPKSPPNSPNSSTRKACYGVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYENLGVDIFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREGI 224
BLAST of CMJ_chr3_022370.2 vs. ExPASy Swiss-Prot
Match: COV1_ARATH (Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 SV=2) HSP 1 Score: 300.827 bits (769), Expect = 2.893e-102 Identity = 139/180 (77.22%), Postives = 158/180 (87.78%), Query Frame = 0 Query: 44 LQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 ++ W SKKFMTGCV+L P+A+TF +TWWFI FVD FFSPIYA+LG+ +FG GFLTSI FIF VGVF SSWLGA+V LGEWFIKR+PF++HIY+ASKQIS AISPDQNT AFKEVAIIRHPR+GEYAFGFITS+VVLQ +EELC VYVPTNHLYIGDI LVNS ++IRPNLSVREGI Sbjct: 59 IRGWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFIFLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGI 238
BLAST of CMJ_chr3_022370.2 vs. ExPASy Swiss-Prot
Match: LCV3_ARATH (Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 1.068e-101 Identity = 144/212 (67.92%), Postives = 173/212 (81.60%), Query Frame = 0 Query: 14 QGLTPHDPE-DVPKSPPHSP-NSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 G +P D VP SP SP + + ++A Y V++SW SKKFMTGCV+L P+AVTF TWWFI FVD FFSPIY LG+ +FGLGF+TSI FIF VGVF SSWLGA+V +GEWFIK++P + +IYSASKQIS AISPDQ++ AFKEVAIIRHP +GEYAFGFITS+V+L+ G EELC VYVPTNHLY+GDIFL++S++IIRPNLSVREGI Sbjct: 17 SGASPRDVVLSVPPSPLASPIHVAGKEAIYKVIRSWASKKFMTGCVILLPIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGFVTSITFIFMVGVFMSSWLGASVLSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFKEVAIIRHPHMGEYAFGFITSTVILRGRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPNLSVREGI 228
BLAST of CMJ_chr3_022370.2 vs. ExPASy Swiss-Prot
Match: LCV1_ARATH (Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 1.321e-101 Identity = 141/180 (78.33%), Postives = 156/180 (86.67%), Query Frame = 0 Query: 44 LQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 ++ W SKKFMTGCV+L P+AVTF TWWFI FVD FFSPIYA LG+ IFG GFLTSI FIF VGVF SSWLGA+V LGEWFIKR+PF++HIY+ASKQIS AISPDQNT AFKEVAIIRHPR+GEYAFGFITS+VVLQ +EELC VYVPTNHLYIGDI LVNS ++IRPNLSVREGI Sbjct: 49 IRGWASKKFMTGCVILLPIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGI 228
BLAST of CMJ_chr3_022370.2 vs. Araport11
Match: AT1G43130.1 (| like COV 2 | Chr1:16228661-16231158 REVERSE LENGTH=261 | 201606) HSP 1 Score: 403.675 bits (1036), Expect = 5.954e-144 Identity = 191/224 (85.27%), Postives = 211/224 (94.20%), Query Frame = 0 Query: 1 MAEEKESTSSSLSQGLTPH-DPEDVPKSPPHSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 MAE KE+T+SSLSQGLTPH DP+D PKSPP+SPNSSTRKACY VLQSWVSKKFMTG VVLFPVAVTFL+TWWFI+FVD FFSPIY LGV+IFGLGF+TS+LF FFVG+FASSWLG+TVFWLGE FI+R+PF+KHIYSASKQIS AISPDQNT+AFKEVAIIRHPR+GEYAFGFITSSV LQ DHG+EELCSVYVPTNHLYIGD+FLV+SEEIIRPNLS+REGI Sbjct: 1 MAEGKEATTSSLSQGLTPHQDPDDAPKSPPNSPNSSTRKACYGVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYENLGVDIFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREGI 224
BLAST of CMJ_chr3_022370.2 vs. Araport11
Match: AT1G43130.3 (| like COV 2 | Chr1:16228661-16230522 REVERSE LENGTH=228 | 201606) HSP 1 Score: 338.576 bits (867), Expect = 9.364e-119 Identity = 159/185 (85.95%), Postives = 175/185 (94.59%), Query Frame = 0 Query: 39 ACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 ACY VLQSWVSKKFMTG VVLFPVAVTFL+TWWFI+FVD FFSPIY LGV+IFGLGF+TS+LF FFVG+FASSWLG+TVFWLGE FI+R+PF+KHIYSASKQIS AISPDQNT+AFKEVAIIRHPR+GEYAFGFITSSV LQ DHG+EELCSVYVPTNHLYIGD+FLV+SEEIIRPNLS+REGI Sbjct: 7 ACYGVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYENLGVDIFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREGI 191
BLAST of CMJ_chr3_022370.2 vs. Araport11
Match: AT1G43130.2 (| like COV 2 | Chr1:16228661-16230522 REVERSE LENGTH=228 | 201606) HSP 1 Score: 338.576 bits (867), Expect = 9.364e-119 Identity = 159/185 (85.95%), Postives = 175/185 (94.59%), Query Frame = 0 Query: 39 ACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 ACY VLQSWVSKKFMTG VVLFPVAVTFL+TWWFI+FVD FFSPIY LGV+IFGLGF+TS+LF FFVG+FASSWLG+TVFWLGE FI+R+PF+KHIYSASKQIS AISPDQNT+AFKEVAIIRHPR+GEYAFGFITSSV LQ DHG+EELCSVYVPTNHLYIGD+FLV+SEEIIRPNLS+REGI Sbjct: 7 ACYGVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYENLGVDIFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREGI 191
BLAST of CMJ_chr3_022370.2 vs. Araport11
Match: AT2G20120.2 (| CONTINUOUS VASCULAR RING protein (DUF502) | Chr2:8687568-8689321 REVERSE LENGTH=268 | 201606) HSP 1 Score: 299.671 bits (766), Expect = 7.413e-103 Identity = 138/180 (76.67%), Postives = 158/180 (87.78%), Query Frame = 0 Query: 44 LQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 ++ W SKKFMTGCV+L P+A+TF +TWWFI FVD FFSPIYA+LG+ +FG GFLTSI FIF VGVF SSWLGA+V LGEWFIKR+PF++HIY+ASKQIS AISPDQNT AFKEVAIIRHPR+GEYAFGFITS+VVLQ +EELC VYVPTNHLYIGD+ LVNS ++IRPNLSVREGI Sbjct: 59 IRGWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFIFLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDLLLVNSNDVIRPNLSVREGI 238
BLAST of CMJ_chr3_022370.2 vs. Araport11
Match: AT2G20120.1 (| CONTINUOUS VASCULAR RING protein (DUF502) | Chr2:8687568-8689321 REVERSE LENGTH=268 | 201606) HSP 1 Score: 299.671 bits (766), Expect = 7.413e-103 Identity = 138/180 (76.67%), Postives = 158/180 (87.78%), Query Frame = 0 Query: 44 LQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 ++ W SKKFMTGCV+L P+A+TF +TWWFI FVD FFSPIYA+LG+ +FG GFLTSI FIF VGVF SSWLGA+V LGEWFIKR+PF++HIY+ASKQIS AISPDQNT AFKEVAIIRHPR+GEYAFGFITS+VVLQ +EELC VYVPTNHLYIGD+ LVNS ++IRPNLSVREGI Sbjct: 59 IRGWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFIFLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDLLLVNSNDVIRPNLSVREGI 238
BLAST of CMJ_chr3_022370.2 vs. Araport11
Match: AT2G18460.1 (| like COV 3 | Chr2:8001320-8002854 FORWARD LENGTH=274 | 201606) HSP 1 Score: 299.671 bits (766), Expect = 1.092e-102 Identity = 144/212 (67.92%), Postives = 173/212 (81.60%), Query Frame = 0 Query: 14 QGLTPHDPE-DVPKSPPHSP-NSSTRKACYAVLQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 G +P D VP SP SP + + ++A Y V++SW SKKFMTGCV+L P+AVTF TWWFI FVD FFSPIY LG+ +FGLGF+TSI FIF VGVF SSWLGA+V +GEWFIK++P + +IYSASKQIS AISPDQ++ AFKEVAIIRHP +GEYAFGFITS+V+L+ G EELC VYVPTNHLY+GDIFL++S++IIRPNLSVREGI Sbjct: 17 SGASPRDVVLSVPPSPLASPIHVAGKEAIYKVIRSWASKKFMTGCVILLPIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGFVTSITFIFMVGVFMSSWLGASVLSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFKEVAIIRHPHMGEYAFGFITSTVILRGRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPNLSVREGI 228
BLAST of CMJ_chr3_022370.2 vs. Araport11
Match: AT2G20130.1 (| like COV 1 | Chr2:8690614-8692234 REVERSE LENGTH=256 | 201606) HSP 1 Score: 298.901 bits (764), Expect = 1.351e-102 Identity = 141/180 (78.33%), Postives = 156/180 (86.67%), Query Frame = 0 Query: 44 LQSWVSKKFMTGCVVLFPVAVTFLVTWWFIEFVDSFFSPIYARLGVEIFGLGFLTSILFIFFVGVFASSWLGATVFWLGEWFIKRLPFMKHIYSASKQISAAISPDQNTSAFKEVAIIRHPRLGEYAFGFITSSVVLQRDHGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSVREGI 223 ++ W SKKFMTGCV+L P+AVTF TWWFI FVD FFSPIYA LG+ IFG GFLTSI FIF VGVF SSWLGA+V LGEWFIKR+PF++HIY+ASKQIS AISPDQNT AFKEVAIIRHPR+GEYAFGFITS+VVLQ +EELC VYVPTNHLYIGDI LVNS ++IRPNLSVREGI Sbjct: 49 IRGWASKKFMTGCVILLPIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGI 228 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_022370.2 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_022370.2 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 4 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_022370.2 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 7 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_022370.2_cmj_v1 ID=CMJ_chr3_022370.2_cmj_v1; Name=CMJ_chr3_022370.2; organism=Citrus maxima; type=mRNA; length=735bpback to top protein sequence of CMJ_chr3_022370.2_cmj_v1 >CMJ_chr3_022370.2_cmj_v1 ID=CMJ_chr3_022370.2_cmj_v1; Name=CMJ_chr3_022370.2_cmj_v1; organism=Citrus maxima; type=polypeptide; length=245bpback to top mRNA from alignment at chr3:38501420..38505717- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=4298bp; location=Sequence derived from: chr3:38501420..38505717- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:38501420..38505717- >CMJ_chr3_022370.2_cmj_v1 ID=CMJ_chr3_022370.2_cmj_v1; Name=CMJ_chr3_022370.2; organism=Citrus maxima; type=CDS; length=735bp; location=Sequence derived from: chr3:38501420..38505717- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|