CMJ_chr3_022420.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_022420.1 vs. ExPASy TrEMBL
Match: A0A2H5NJA8|A0A2H5NJA8_CITUN (PMEI domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_046860 PE=4 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 1.384e-132 Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 0 Query: 1 MKQVAAAVIAFLLLLLVHSSSSTKSYSTASNWPSASLVDDVCKKSDTTYGDCVSTLESDPRTRTASDLRSLARIVLETAHANTTKSKEHFEILAKSSMTAPDLMAALKKCIFGYDRAAALFSSSRMKIDFDITAASYDAIAAHAGALFCAYQYNSTTRIDVQTIRARNIYLESYATIAFVIINQLGG 187
MKQVAAAVIAFLLLLLVHSSSSTKSYSTASNWPSASLVDDVCKKSDTTYGDCVSTLESDPRTRTASDLRSLARIVLETAHANTTKSKEHFEILAKSSMTAPDLMAALKKCIFGYDRAAALFSSSRMKID DITAASYDAIAAHAGALFCAYQYNSTTRIDVQTIRARNIYLESYATIAFVIINQLGG
Sbjct: 1 MKQVAAAVIAFLLLLLVHSSSSTKSYSTASNWPSASLVDDVCKKSDTTYGDCVSTLESDPRTRTASDLRSLARIVLETAHANTTKSKEHFEILAKSSMTAPDLMAALKKCIFGYDRAAALFSSSRMKIDLDITAASYDAIAAHAGALFCAYQYNSTTRIDVQTIRARNIYLESYATIAFVIINQLGG 187
BLAST of CMJ_chr3_022420.1 vs. ExPASy TrEMBL
Match: V4TDL0|V4TDL0_CITCL (PMEI domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10003694mg PE=4 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 3.520e-111 Identity = 155/158 (98.10%), Postives = 157/158 (99.37%), Query Frame = 0 Query: 30 SNWPSASLVDDVCKKSDTTYGDCVSTLESDPRTRTASDLRSLARIVLETAHANTTKSKEHFEILAKSSMTAPDLMAALKKCIFGYDRAAALFSSSRMKIDFDITAASYDAIAAHAGALFCAYQYNSTTRIDVQTIRARNIYLESYATIAFVIINQLGG 187
SNWPSASLVDDVCK+SDTTYGDCVSTLESDPRTRTASDLRSLARIVLETAHANTTKSKEHFEI+AKSSMTAPDLMAALKKCIFGYDRAAALFSSSRMKID DITAASYDAIAAHAGALFCAYQYNSTTRIDVQTIRARNIYLESYATIAFVIINQLGG
Sbjct: 1 SNWPSASLVDDVCKQSDTTYGDCVSTLESDPRTRTASDLRSLARIVLETAHANTTKSKEHFEIMAKSSMTAPDLMAALKKCIFGYDRAAALFSSSRMKIDLDITAASYDAIAAHAGALFCAYQYNSTTRIDVQTIRARNIYLESYATIAFVIINQLGG 158
BLAST of CMJ_chr3_022420.1 vs. ExPASy TrEMBL
Match: A0A2H5NHV5|A0A2H5NHV5_CITUN (PMEI domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_046870 PE=4 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.671e-55 Identity = 102/187 (54.55%), Postives = 130/187 (69.52%), Query Frame = 0 Query: 1 MKQVAAAVIAFLLLLLVHSSSSTKSYSTASNWPSASLVDDVCKKSDTTYGDCVSTLESDPRTRTASDLRSLARIVLETAHANTTKSKEHFEILAKSSMTAPDLMAALKKCIFGYDRAAALFSSSRMKIDFDITAASYDAIAAHAGALFCAYQYNSTTRIDVQTIRARNIYLESYATIAFVIINQLGG 187
MKQVAAA+ FL++ VH+ SST S A N P +LVD VCK+++ Y DCVS L+ +PRT ASDL+SLARIVLETA ANTT SK +FE++ KS TAP LM LK CI Y RA ALF+S+ M++D DITAA+YDA+ A+ G+ +C NS TR+DV +I+ R YL+ Y I + I QL G
Sbjct: 1 MKQVAAAIAFFLVI--VHTCSSTNS--IAPNSP-PTLVDGVCKQTEN-YADCVSALQLNPRTSAASDLKSLARIVLETAIANTTNSKVYFELMTKSKRTAPSLMPTLKNCISSYARAVALFNSTIMELDSDITAATYDALLAYLGSWYCGDSLNS-TRLDVPSIKTRVYYLDLYGIIGYRITKQLSG 180
BLAST of CMJ_chr3_022420.1 vs. ExPASy TrEMBL
Match: V4T8E6|V4T8E6_CITCL (PMEI domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10002638mg PE=4 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 4.317e-55 Identity = 101/187 (54.01%), Postives = 130/187 (69.52%), Query Frame = 0 Query: 1 MKQVAAAVIAFLLLLLVHSSSSTKSYSTASNWPSASLVDDVCKKSDTTYGDCVSTLESDPRTRTASDLRSLARIVLETAHANTTKSKEHFEILAKSSMTAPDLMAALKKCIFGYDRAAALFSSSRMKIDFDITAASYDAIAAHAGALFCAYQYNSTTRIDVQTIRARNIYLESYATIAFVIINQLGG 187
MKQVAAA+ FL++ VH+ SST S A N P +LVD VCK+++ Y DCVS L+ +PRT ASDL+SLARIVLETA ANTT SK++FE++ KS TAP LM LK CI Y R ALF+S+ M++D DITAA+YDA+ A+ G+ +C NS TR+DV +I+ R YL+ Y I + I QL G
Sbjct: 1 MKQVAAAIAFFLVI--VHTCSSTNS--IAPNSP-PTLVDGVCKQTEN-YADCVSALQLNPRTSAASDLKSLARIVLETAIANTTNSKDYFELMTKSKRTAPSLMPTLKNCISSYARTVALFNSTIMELDSDITAATYDALLAYLGSWYCGDSLNS-TRLDVPSIKIRVYYLDLYGIIGYRITKQLSG 180
BLAST of CMJ_chr3_022420.1 vs. ExPASy TrEMBL
Match: A0A067GYN4|A0A067GYN4_CITSI (PMEI domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g045190mg PE=4 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.217e-54 Identity = 100/187 (53.48%), Postives = 129/187 (68.98%), Query Frame = 0 Query: 1 MKQVAAAVIAFLLLLLVHSSSSTKSYSTASNWPSASLVDDVCKKSDTTYGDCVSTLESDPRTRTASDLRSLARIVLETAHANTTKSKEHFEILAKSSMTAPDLMAALKKCIFGYDRAAALFSSSRMKIDFDITAASYDAIAAHAGALFCAYQYNSTTRIDVQTIRARNIYLESYATIAFVIINQLGG 187
MKQVAAA+ FL++ VH+ SST S A N P +LVD VCK+++ Y DCVS L+ +PRT ASDL+SLARIVLETA ANTT SK++FE++ KS TAP LM LK CI Y R ALF+S+ M++D DITAA+YDA+ + G+ +C NS TR+DV +I+ R YL+ Y I + I QL G
Sbjct: 1 MKQVAAAIAFFLVI--VHTCSSTNS--IAPNSP-PTLVDGVCKQTEN-YADCVSALQLNPRTSAASDLKSLARIVLETAIANTTNSKDYFELMTKSKRTAPSLMPTLKNCISSYARTVALFNSTIMELDSDITAATYDALLGYLGSWYCGDSLNS-TRLDVPSIKIRVYYLDLYGIIGYRITKQLSG 180
BLAST of CMJ_chr3_022420.1 vs. ExPASy TrEMBL
Match: V4V6S2|V4V6S2_CITCL (PMEI domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10003123mg PE=4 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.592e-36 Identity = 75/155 (48.39%), Postives = 104/155 (67.10%), Query Frame = 0 Query: 33 PSASLVDDVCKKSDTTYGDCVSTLESDPRTRTASDLRSLARIVLETAHANTTKSKEHFEILAKSSMTAPDLMAALKKCIFGYDRAAALFSSSRMKIDFDITAASYDAIAAHAGALFCAYQYNSTTRIDVQTIRARNIYLESYATIAFVIINQLGG 187
PS LVD VCKK+ Y DCVS + S +ASDL++LAR+ LE A +NTT SK++ + LAK TAP L+ ALK+C+ Y+ +AA F S++M+ID DI++A+YDA A GA C +T + DV +++ARN Y++ Y+ I FVI QLGG
Sbjct: 6 PS-KLVDGVCKKT-LNYADCVSAIGS----ASASDLKTLARVSLERAVSNTTNSKDYIDKLAKDKSTAPALIRALKECVSDYESSAASFKSAKMEIDEDISSANYDAKVAGDGADSCDTSLKATKK-DVPSVKARNYYVKLYSNIGFVITEQLGG 153
BLAST of CMJ_chr3_022420.1 vs. ExPASy TrEMBL
Match: A0A067H885|A0A067H885_CITSI (PMEI domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g044871mg PE=4 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.857e-35 Identity = 71/155 (45.81%), Postives = 102/155 (65.81%), Query Frame = 0 Query: 31 NWPSASLVDDVCKKSDTTYGDCVSTLESDPRTRTASDLRSLARIVLETAHANTTKSKEHFEILAKSSMTAPDLMAALKKCIFGYDRAAALFSSSRMKIDFDITAASYDAIAAHAGALFCAYQYNSTTRIDVQTIRARNIYLESYATIAFVIINQL 185
N PS +LVD VCK + Y DCVS LESDP+T +ASDL++LA+I A NTT K++ +AK S TA L+ ALK+C+ Y+ A F S+++++D D+ +A+YDA AA A+ C NS TR+DV ++RARN Y+ ++ I +VI + L
Sbjct: 36 NSPS-TLVDSVCKNA-LNYSDCVSALESDPQTPSASDLKALAKIAFAIAVTNTTNGKDYIAKMAKDSSTATSLVPALKQCVSDYESAVVSFDSAKVELDEDVMSANYDAKAAGDSAVSCETSLNS-TRLDVPSVRARNYYVNLFSNIGYVITDML 187
BLAST of CMJ_chr3_022420.1 vs. ExPASy TrEMBL
Match: A0A2H5NHV8|A0A2H5NHV8_CITUN (PMEI domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_046850 PE=4 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.700e-34 Identity = 70/155 (45.16%), Postives = 102/155 (65.81%), Query Frame = 0 Query: 31 NWPSASLVDDVCKKSDTTYGDCVSTLESDPRTRTASDLRSLARIVLETAHANTTKSKEHFEILAKSSMTAPDLMAALKKCIFGYDRAAALFSSSRMKIDFDITAASYDAIAAHAGALFCAYQYNSTTRIDVQTIRARNIYLESYATIAFVIINQL 185
N PS +LV+ VCK + Y DCVS LESDP+T +ASDL++LA+I A NTT K++ +AK S TA L+ ALK+C+ Y+ A F S+++++D D+ +A+YDA AA A+ C NS TR+DV ++RARN Y+ ++ I +VI + L
Sbjct: 36 NSPS-TLVESVCKNA-LNYSDCVSALESDPQTPSASDLKALAKIAFAIAVTNTTNGKDYIAKMAKDSSTATSLVPALKQCVSDYESAVVSFDSAKVELDEDVMSANYDAKAAGDSAVSCETSLNS-TRLDVPSVRARNYYVNLFSNIGYVITDML 187
BLAST of CMJ_chr3_022420.1 vs. ExPASy TrEMBL
Match: V4T3K6|V4T3K6_CITCL (PMEI domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10003770mg PE=4 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.700e-34 Identity = 70/155 (45.16%), Postives = 102/155 (65.81%), Query Frame = 0 Query: 31 NWPSASLVDDVCKKSDTTYGDCVSTLESDPRTRTASDLRSLARIVLETAHANTTKSKEHFEILAKSSMTAPDLMAALKKCIFGYDRAAALFSSSRMKIDFDITAASYDAIAAHAGALFCAYQYNSTTRIDVQTIRARNIYLESYATIAFVIINQL 185
N PS +LV+ VCK + Y DCVS LESDP+T +ASDL++LA+I A NTT K++ +AK S TA L+ ALK+C+ Y+ A F S+++++D D+ +A+YDA AA A+ C NS TR+DV ++RARN Y+ ++ I +VI + L
Sbjct: 36 NSPS-TLVESVCKNA-LNYSDCVSALESDPQTPSASDLKALAKIAFAIAVTNTTNGKDYIAKMAKDSSTATSLVPALKQCVSDYESAVVSFDSAKVELDEDVMSANYDAKAAGDSAVSCETSLNS-TRLDVPSVRARNYYVNLFSNIGYVITDML 187
BLAST of CMJ_chr3_022420.1 vs. ExPASy TrEMBL
Match: A0A7N2KW71|A0A7N2KW71_QUELO (PMEI domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.681e-22 Identity = 59/156 (37.82%), Postives = 86/156 (55.13%), Query Frame = 0 Query: 30 SNWPSASLVDDVCKKSDTTYGDCVSTLESDPRTRTASDLRSLARIVLETAHANTTKSKEHFEILAKSSMTAPDLMAALKKCIFGYDRAAALFSSSRMKIDFDITAASYDAIAAHAGALFCAYQYNSTTRIDVQTIRARNIYLESYATIAFVIINQL 185
+N + LV+ VC K+ GDC++ LESDPRT T S+L+ LA+I L+ A AN+TKSK + L + T P +K+C F Y F S+ ++D D A+YDA A GA C ++ + V +I RN Y+ Y++I F + N L
Sbjct: 27 TNASTNKLVEGVCNKT-INNGDCINALESDPRTATTSELKDLAKIALQMAVANSTKSKAYIYDLLNKNHTEP-----IKQCSFWYGAVVGSFRSALGELDEDTLTANYDAKVAADGANICENAL-ASAGVQVPSISTRNNYVRLYSSIGFEVTNDL 175 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_022420.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_022420.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_022420.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_022420.1_cmj_v1 ID=CMJ_chr3_022420.1_cmj_v1; Name=CMJ_chr3_022420.1; organism=Citrus maxima; type=mRNA; length=564bpback to top protein sequence of CMJ_chr3_022420.1_cmj_v1 >CMJ_chr3_022420.1_cmj_v1 ID=CMJ_chr3_022420.1_cmj_v1; Name=CMJ_chr3_022420.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=188bpback to top mRNA from alignment at chr3:38542293..38542856- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=564bp; location=Sequence derived from: chr3:38542293..38542856- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:38542293..38542856- >CMJ_chr3_022420.1_cmj_v1 ID=CMJ_chr3_022420.1_cmj_v1; Name=CMJ_chr3_022420.1; organism=Citrus maxima; type=CDS; length=564bp; location=Sequence derived from: chr3:38542293..38542856- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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