CMJ_chr3_023260.3
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of CMJ_chr3_023260.3 vs. ExPASy TrEMBL
Match: A0A067GW41|A0A067GW41_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g019277mg PE=4 SV=1) HSP 1 Score: 456.062 bits (1172), Expect = 2.784e-160 Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0 Query: 1 MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKE 217
MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNI IVTKWIKTTETALVLRNLEVNYKE
Sbjct: 1 MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKE 217
BLAST of CMJ_chr3_023260.3 vs. ExPASy TrEMBL
Match: A0A2H5NHI3|A0A2H5NHI3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_045930 PE=4 SV=1) HSP 1 Score: 454.521 bits (1168), Expect = 1.317e-159 Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0 Query: 1 MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKE 217
MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQF+ATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNI IVTKWIKTTETALVLRNLEVNYKE
Sbjct: 1 MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFLATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKE 217
BLAST of CMJ_chr3_023260.3 vs. ExPASy TrEMBL
Match: A0A067H8L7|A0A067H8L7_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g019277mg PE=4 SV=1) HSP 1 Score: 453.751 bits (1166), Expect = 1.346e-159 Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0 Query: 1 MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKE 217
MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNI IVTKWIKTTETALVLRNLEVNYKE
Sbjct: 1 MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKE 217
BLAST of CMJ_chr3_023260.3 vs. ExPASy TrEMBL
Match: A0A067GZ32|A0A067GZ32_CITSI (Tyrosine-protein phosphatase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g019277mg PE=4 SV=1) HSP 1 Score: 451.825 bits (1161), Expect = 1.452e-159 Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0 Query: 1 MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKE 217
MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNI IVTKWIKTTETALVLRNLEVNYKE
Sbjct: 1 MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKE 217
BLAST of CMJ_chr3_023260.3 vs. ExPASy TrEMBL
Match: A0A067H890|A0A067H890_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g019277mg PE=4 SV=1) HSP 1 Score: 453.751 bits (1166), Expect = 2.208e-159 Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0 Query: 1 MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKE 217
MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNI IVTKWIKTTETALVLRNLEVNYKE
Sbjct: 1 MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKE 217
BLAST of CMJ_chr3_023260.3 vs. ExPASy TrEMBL
Match: V4SJH1|V4SJH1_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001727mg PE=4 SV=1) HSP 1 Score: 451.055 bits (1159), Expect = 2.569e-158 Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 0 Query: 1 MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKE 217
MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKS+EISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNI I+TKWIKTTETALVLRNLEVNYKE
Sbjct: 1 MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSQEISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGILTKWIKTTETALVLRNLEVNYKE 217
BLAST of CMJ_chr3_023260.3 vs. ExPASy TrEMBL
Match: A0A2H5NIZ4|A0A2H5NIZ4_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_045920 PE=4 SV=1) HSP 1 Score: 450.669 bits (1158), Expect = 3.574e-157 Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0 Query: 1 MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKE 217
MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQF+ATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNI IVTKWIKTTETALVLRNLEVNYKE
Sbjct: 1 MAASSAGNHSTPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFLATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKE 217
BLAST of CMJ_chr3_023260.3 vs. ExPASy TrEMBL
Match: F6GYU9|F6GYU9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0076g00280 PE=4 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 3.163e-119 Identity = 170/218 (77.98%), Postives = 187/218 (85.78%), Query Frame = 0 Query: 1 MAASSAGNH-STPHNTKPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKE 217
MAA SAG + + KPF+FS D PPR+SLT DQ+ HCSEAL FFK+KLQ + I QEFA LQA+R++PSEM R CTVALD VNLSKNRYTD+LPFDK RVVL CKDYRP+ARGYINAS I TSS+E +S+FIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYK VKCGDYFQAEDGPREFGNI IVTKWIKTTET+LVLR+LEVNYKE
Sbjct: 1 MAAESAGKSIAVSSSRKPFDFSP-DSPPRLSLTPDQFKHCSEALRFFKDKLQMPEK-IRQEFAFLQANRMRPSEMMRSCTVALDSVNLSKNRYTDVLPFDKTRVVLNSCKDYRPSARGYINASFIETSSTESISRFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKTVKCGDYFQAEDGPREFGNIFIVTKWIKTTETSLVLRHLEVNYKE 216
BLAST of CMJ_chr3_023260.3 vs. ExPASy TrEMBL
Match: B9MW58|B9MW58_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G115400 PE=4 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 1.791e-116 Identity = 167/222 (75.23%), Postives = 191/222 (86.04%), Query Frame = 0 Query: 1 MAASSAGNHSTPHNT-----KPFEFSAVDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKE 217
MA+SSAGN S P +T K FEFS D PP+ISL+ DQY HCSEAL FFKEK + R I+QEFA LQASRI PS+MAR C VALDGVN++KNRY D++PFD+NRVVL CKDYRP+ARGYINASLI+TSSS+ +SQFIATQGPLPHT+EDFWEM+IQ+HCPVIVMLTRLVDNYK VKCGDYFQAEDGPR+FGNI IVTKWIKTT+T+L+LRNL+V YKE
Sbjct: 1 MASSSAGN-SPPISTISSLSKRFEFSP-DPPPKISLSTDQYQHCSEALHFFKEKFRTPKR-IAQEFAHLQASRITPSQMARSCKVALDGVNVNKNRYLDVVPFDQNRVVLNPCKDYRPSARGYINASLITTSSSDNISQFIATQGPLPHTFEDFWEMIIQHHCPVIVMLTRLVDNYKTVKCGDYFQAEDGPRDFGNISIVTKWIKTTDTSLLLRNLKVGYKE 219
BLAST of CMJ_chr3_023260.3 vs. ExPASy TrEMBL
Match: A0A5C7H7Y5|A0A5C7H7Y5_9ROSI (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022327 PE=4 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 8.757e-116 Identity = 175/253 (69.17%), Postives = 195/253 (77.08%), Query Frame = 0 Query: 1 MAASSAGNHSTPHNTKPFEFSA---VDFPPRISLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILP--------------------------------FDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYK-MVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKE 217
MAASSAGNH P + F FS+ D P ++ LTADQ+ HCSEALSFFKEKLQN +I+ EFA+LQA+RI+PSEMAR CTVALDGVNLSKNRYTDILP DKNRVVL QCKDYRP+ARGYINASLI+T+S E+VS FIATQGP+PHTYEDFWEMVIQY CPVIVMLTRLVDNYK MVKCGDYFQAEDGPR+FGNICIVTKWI++T+T+LVLRNLEVNYKE
Sbjct: 1 MAASSAGNHPEPTS---FVFSSSADADSPRKMLLTADQHRHCSEALSFFKEKLQNSPNQITTEFAQLQANRIRPSEMARSCTVALDGVNLSKNRYTDILPCHFFTFSSKLVIFIYSKTSFNYLFIYLYFCISVDKNRVVLNQCKDYRPSARGYINASLITTTSLERVSPFIATQGPMPHTYEDFWEMVIQYRCPVIVMLTRLVDNYKVMVKCGDYFQAEDGPRDFGNICIVTKWIQSTDTSLVLRNLEVNYKE 250
BLAST of CMJ_chr3_023260.3 vs. ExPASy Swiss-Prot
Match: PTP1_ARATH (Protein-tyrosine-phosphatase PTP1 OS=Arabidopsis thaliana OX=3702 GN=PTP1 PE=1 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 4.283e-91 Identity = 136/215 (63.26%), Postives = 164/215 (76.28%), Query Frame = 0 Query: 4 SSAGNHSTPHNTKPFEFSAVDFPPRISLTA-DQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKE 217
SSA N T + F+ S+ D PP + DQ NHC +AL F+ K+QN I+ EF LQA+R+ PSE+ TVA++ VN+ KNRY+D++PFDKNR+VL CKD +A+GY+NASLI TS SE +SQFIATQGPLPHT EDFWEMVIQ HCP+IVMLTRLVDN + VKCGDYFQ EDGPREFGNI + TKWIKTT+T+L+LRNLEVNYKE
Sbjct: 7 SSAANLFT--GSTRFDLSSADSPPSKLSLSSDQLNHCHQALGVFRGKIQNPD-SIAHEFTGLQANRMWPSELLLNSTVAMNSVNVEKNRYSDVVPFDKNRIVLNPCKD--SSAKGYVNASLIKTSESESISQFIATQGPLPHTMEDFWEMVIQQHCPIIVMLTRLVDNNRTVKCGDYFQDEDGPREFGNISLTTKWIKTTDTSLMLRNLEVNYKE 216
BLAST of CMJ_chr3_023260.3 vs. ExPASy Swiss-Prot
Match: PTN20_RAT (Tyrosine-protein phosphatase non-receptor type 20 OS=Rattus norvegicus OX=10116 GN=Ptpn20 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.471e-20 Identity = 62/166 (37.35%), Postives = 91/166 (54.82%), Query Frame = 0 Query: 50 LQNKSR-EISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAE-DGPREFGNICIVTKWIKTTETALVLRNLEV 213
LQ K +I +EF L+ I P + G + N KNRY DILP+D RV L + KDY INAS I + E+ +IATQGPLP T EDFW+MV++ +C VI M+TR ++ ++KC Y+ P EF + ++ + + T+ V+R ++
Sbjct: 152 LQKKEELDIIREFLELE-EMIPPDDFKSGYELQ----NRDKNRYRDILPYDSTRVPLGKNKDY-------INASYIRIVNHEEEYFYIATQGPLPDTIEDFWQMVLENNCNVIAMITREIEG-GVIKCCSYWPVSLKEPLEFKHFHVLLENFQITQ-YFVIRIFQI 303
BLAST of CMJ_chr3_023260.3 vs. ExPASy Swiss-Prot
Match: PTPRN_MOUSE (Receptor-type tyrosine-protein phosphatase-like N OS=Mus musculus OX=10090 GN=Ptprn PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.534e-20 Identity = 55/141 (39.01%), Postives = 84/141 (59.57%), Query Frame = 0 Query: 43 LSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAE 183
L++ ++ L+N+ R +++E+ L A + +P+ C A D N+ KNR+ D LP+D R+ LK + P+ YINAS I ++ +IATQGPL HT DFW+MV + C VIVMLT LV++ + +C Y+ E
Sbjct: 696 LAYMEDHLRNRDR-LAKEWQALCAYQAEPNT----CAAAQDESNIKKNRHPDFLPYDHARIKLK--VESSPSRSDYINASPI-IEHDPRMPAYIATQGPLSHTIADFWQMVWESGCTVIVMLTPLVED-GVKQCDRYWPDE 827
BLAST of CMJ_chr3_023260.3 vs. ExPASy Swiss-Prot
Match: PTP1_DICDI (Tyrosine-protein phosphatase 1 OS=Dictyostelium discoideum OX=44689 GN=ptpA1-1 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 3.326e-20 Identity = 63/172 (36.63%), Postives = 93/172 (54.07%), Query Frame = 0 Query: 56 EISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREF-----GNICIVT------KWIKTTETALVLRNLEVNYK 216
+I +EF L+ S + PSE + G N SKNRYT+ILP + RV LK+ +D YINA+ I + + QFI TQGPLP+T DFW MV + C +IVML+R +N + +KC Y+ + G +F GN T + I+ E ++ RN+ + ++
Sbjct: 96 KIKEEFRLLEES-VGPSETSEGDKKH----NTSKNRYTNILPVNHTRVQLKKIQD--KEGSDYINANYIDGAYPK---QFICTQGPLPNTIADFWRMVWENRCRIIVMLSRESENCR-IKCDRYWPEQIGGEQFSIYGNGNEVFGTYSVELVEVIQDPEREIITRNIRLTFE 256
BLAST of CMJ_chr3_023260.3 vs. ExPASy Swiss-Prot
Match: PTN20_MOUSE (Tyrosine-protein phosphatase non-receptor type 20 OS=Mus musculus OX=10090 GN=Ptpn20 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.228e-20 Identity = 60/156 (38.46%), Postives = 85/156 (54.49%), Query Frame = 0 Query: 50 LQNKSR-EISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAE-DGPREFGNICIVTKWIKTTE 203
LQ K +I +EF L+ + P + G T+ N KNRY DILP+D RV L + KDY INAS I + E+ +IATQGPLP T EDFW+MV++ +C VI M+TR ++ ++KC Y+ P EF + + + T+
Sbjct: 157 LQKKEELDIIREFLELEQMTL-PDDFNSGNTLQ----NRDKNRYRDILPYDSTRVPLGKNKDY-------INASYIRIVNHEEEYFYIATQGPLPETIEDFWQMVLENNCNVIAMITREIE-CGVIKCYSYWPISLKEPLEFEHFSVFLETFHVTQ 299
BLAST of CMJ_chr3_023260.3 vs. ExPASy Swiss-Prot
Match: PTPRN_BOVIN (Receptor-type tyrosine-protein phosphatase-like N OS=Bos taurus OX=9913 GN=PTPRN PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.330e-19 Identity = 54/141 (38.30%), Postives = 83/141 (58.87%), Query Frame = 0 Query: 43 LSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAE 183
L++ ++ L+N+ R +++E+ L A + +P+ C A N+ KNR+ D LP+D R+ LK + P+ YINAS I ++ +IATQGPL HT DFW+MV + C VIVMLT LV++ + +C Y+ E
Sbjct: 696 LAYMEDHLRNRDR-LAKEWQALCAYQAEPNT----CATAQGEGNIKKNRHPDFLPYDHARIKLK--VESSPSRSDYINASPI-IEHDPRMPAYIATQGPLSHTIADFWQMVWESGCTVIVMLTPLVED-GVKQCDRYWPDE 827
BLAST of CMJ_chr3_023260.3 vs. ExPASy Swiss-Prot
Match: PTPRN_HUMAN (Receptor-type tyrosine-protein phosphatase-like N OS=Homo sapiens OX=9606 GN=PTPRN PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.422e-19 Identity = 54/141 (38.30%), Postives = 83/141 (58.87%), Query Frame = 0 Query: 43 LSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAE 183
L++ ++ L+N+ R +++E+ L A + +P+ C A N+ KNR+ D LP+D R+ LK + P+ YINAS I ++ +IATQGPL HT DFW+MV + C VIVMLT LV++ + +C Y+ E
Sbjct: 696 LAYMEDHLRNRDR-LAKEWQALCAYQAEPNT----CATAQGEGNIKKNRHPDFLPYDHARIKLK--VESSPSRSDYINASPI-IEHDPRMPAYIATQGPLSHTIADFWQMVWESGCTVIVMLTPLVED-GVKQCDRYWPDE 827
BLAST of CMJ_chr3_023260.3 vs. ExPASy Swiss-Prot
Match: PTN18_HUMAN (Tyrosine-protein phosphatase non-receptor type 18 OS=Homo sapiens OX=9606 GN=PTPN18 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.873e-19 Identity = 59/183 (32.24%), Postives = 92/183 (50.27%), Query Frame = 0 Query: 42 ALSFFKEKLQNKSRE---ISQEFARLQASRIKPSEMARGCTVALDGV---NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKEK 218
A SF + RE ++ EF+ +QA + A G + G N+ KNRY D+LP+D+ RV+L ++ YIN + I +IATQGPLPHT DFW +V ++ VI+M R ++N + +C Y+ E P + G CI K ++LR L+V ++++
Sbjct: 8 ARSFLERLEARGGREGAVLAGEFSDIQA--CSAAWKADGVCSTVAGSRPENVRKNRYKDVLPYDQTRVILSLLQEE--GHSDYINGNFIRGVDGSLA--YIATQGPLPHTLLDFWRLVWEFGVKVILMACREIENGRK-RCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKE 183
BLAST of CMJ_chr3_023260.3 vs. ExPASy Swiss-Prot
Match: PTPRN_RAT (Receptor-type tyrosine-protein phosphatase-like N OS=Rattus norvegicus OX=10116 GN=Ptprn PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.146e-19 Identity = 54/141 (38.30%), Postives = 83/141 (58.87%), Query Frame = 0 Query: 43 LSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAE 183
L++ ++ L+N+ R +++E+ L A + +P+ C A N+ KNR+ D LP+D R+ LK + P+ YINAS I ++ +IATQGPL HT DFW+MV + C VIVMLT LV++ + +C Y+ E
Sbjct: 700 LAYMEDHLRNRDR-LAKEWQALCAYQAEPNT----CATAQGEGNIKKNRHPDFLPYDHARIKLKV--ESSPSRSDYINASPI-IEHDPRMPAYIATQGPLSHTIADFWQMVWESGCTVIVMLTPLVED-GVKQCDRYWPDE 831
BLAST of CMJ_chr3_023260.3 vs. ExPASy Swiss-Prot
Match: PTN4_HUMAN (Tyrosine-protein phosphatase non-receptor type 4 OS=Homo sapiens OX=9606 GN=PTPN4 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.961e-19 Identity = 55/134 (41.04%), Postives = 77/134 (57.46%), Query Frame = 0 Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICI-VTKWIKTTETALVLRNLEVNYKEK 218
N+SKNRY DI P+D RV+LK +DY A YIN + S+S ++Q+IA QGPLPHT DFW+M + ++VMLT V+ + VKC Y+ G +G C VT + TA + R + + +EK
Sbjct: 679 NISKNRYRDISPYDATRVILKGNEDYINA--NYINMEIPSSSI---INQYIACQGPLPHTCTDFWQMTWEQGSSMVVMLTTQVERGR-VKCHQYWPEPTGSSSYG--CYQVTCHSEEGNTAYIFRKMTLFNQEK 804
BLAST of CMJ_chr3_023260.3 vs. Araport11
Match: AT1G71860.2 (| protein tyrosine phosphatase 1 | Chr1:27026866-27028395 FORWARD LENGTH=277 | 201606) HSP 1 Score: 272.707 bits (696), Expect = 2.125e-92 Identity = 126/184 (68.48%), Postives = 150/184 (81.52%), Query Frame = 0 Query: 34 DQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKE 217
DQ NHC +AL F+ K+QN I+ EF LQA+R+ PSE+ TVA++ VN+ KNRY+D++PFDKNR+VL CKD +A+GY+NASLI TS SE +SQFIATQGPLPHT EDFWEMVIQ HCP+IVMLTRLVDN + VKCGDYFQ EDGPREFGNI + TKWIKTT+T+L+LRNLEVNYKE
Sbjct: 36 DQLNHCHQALGVFRGKIQNPD-SIAHEFTGLQANRMWPSELLLNSTVAMNSVNVEKNRYSDVVPFDKNRIVLNPCKD--SSAKGYVNASLIKTSESESISQFIATQGPLPHTMEDFWEMVIQQHCPIIVMLTRLVDNNRTVKCGDYFQDEDGPREFGNISLTTKWIKTTDTSLMLRNLEVNYKE 216
BLAST of CMJ_chr3_023260.3 vs. Araport11
Match: AT1G71860.3 (| protein tyrosine phosphatase 1 | Chr1:27026866-27028675 FORWARD LENGTH=340 | 201606) HSP 1 Score: 273.863 bits (699), Expect = 4.382e-92 Identity = 136/215 (63.26%), Postives = 164/215 (76.28%), Query Frame = 0 Query: 4 SSAGNHSTPHNTKPFEFSAVDFPPRISLTA-DQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKE 217
SSA N T + F+ S+ D PP + DQ NHC +AL F+ K+QN I+ EF LQA+R+ PSE+ TVA++ VN+ KNRY+D++PFDKNR+VL CKD +A+GY+NASLI TS SE +SQFIATQGPLPHT EDFWEMVIQ HCP+IVMLTRLVDN + VKCGDYFQ EDGPREFGNI + TKWIKTT+T+L+LRNLEVNYKE
Sbjct: 7 SSAANLFT--GSTRFDLSSADSPPSKLSLSSDQLNHCHQALGVFRGKIQNPD-SIAHEFTGLQANRMWPSELLLNSTVAMNSVNVEKNRYSDVVPFDKNRIVLNPCKD--SSAKGYVNASLIKTSESESISQFIATQGPLPHTMEDFWEMVIQQHCPIIVMLTRLVDNNRTVKCGDYFQDEDGPREFGNISLTTKWIKTTDTSLMLRNLEVNYKE 216
BLAST of CMJ_chr3_023260.3 vs. Araport11
Match: AT1G71860.1 (| protein tyrosine phosphatase 1 | Chr1:27026866-27028675 FORWARD LENGTH=340 | 201606) HSP 1 Score: 273.863 bits (699), Expect = 4.382e-92 Identity = 136/215 (63.26%), Postives = 164/215 (76.28%), Query Frame = 0 Query: 4 SSAGNHSTPHNTKPFEFSAVDFPPRISLTA-DQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNICIVTKWIKTTETALVLRNLEVNYKE 217
SSA N T + F+ S+ D PP + DQ NHC +AL F+ K+QN I+ EF LQA+R+ PSE+ TVA++ VN+ KNRY+D++PFDKNR+VL CKD +A+GY+NASLI TS SE +SQFIATQGPLPHT EDFWEMVIQ HCP+IVMLTRLVDN + VKCGDYFQ EDGPREFGNI + TKWIKTT+T+L+LRNLEVNYKE
Sbjct: 7 SSAANLFT--GSTRFDLSSADSPPSKLSLSSDQLNHCHQALGVFRGKIQNPD-SIAHEFTGLQANRMWPSELLLNSTVAMNSVNVEKNRYSDVVPFDKNRIVLNPCKD--SSAKGYVNASLIKTSESESISQFIATQGPLPHTMEDFWEMVIQQHCPIIVMLTRLVDNNRTVKCGDYFQDEDGPREFGNISLTTKWIKTTDTSLMLRNLEVNYKE 216 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_023260.3 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_023260.3 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_023260.3 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_023260.3_cmj_v1 ID=CMJ_chr3_023260.3_cmj_v1; Name=CMJ_chr3_023260.3; organism=Citrus maxima; type=mRNA; length=660bpback to top protein sequence of CMJ_chr3_023260.3_cmj_v1 >CMJ_chr3_023260.3_cmj_v1 ID=CMJ_chr3_023260.3_cmj_v1; Name=CMJ_chr3_023260.3_cmj_v1; organism=Citrus maxima; type=polypeptide; length=220bpback to top mRNA from alignment at chr3:39115023..39119837- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=4815bp; location=Sequence derived from: chr3:39115023..39119837- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:39115023..39119837- >CMJ_chr3_023260.3_cmj_v1 ID=CMJ_chr3_023260.3_cmj_v1; Name=CMJ_chr3_023260.3; organism=Citrus maxima; type=CDS; length=660bp; location=Sequence derived from: chr3:39115023..39119837- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|