CMJ_chr3_023980.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_023980.1 vs. ExPASy TrEMBL
Match: A0A067H961|A0A067H961_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027145mg PE=4 SV=1) HSP 1 Score: 465.692 bits (1197), Expect = 2.150e-164 Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 0 Query: 57 MSMASLIKPTLLVHRSSHNHSNPTSTSLFLSPVILSFPFYRTTSFLHLRVSAALRSDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDDEGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQGGRR 282
MSMASLIKPTLLVHRSSHNHSNPTSTSLFLSPVILSFPFYRTTSFLHLRVSAALRSDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDDEGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEF+KKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQGGRR
Sbjct: 1 MSMASLIKPTLLVHRSSHNHSNPTSTSLFLSPVILSFPFYRTTSFLHLRVSAALRSDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDDEGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFKKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQGGRR 226
BLAST of CMJ_chr3_023980.1 vs. ExPASy TrEMBL
Match: A0A2H5NH76|A0A2H5NH76_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_045030 PE=4 SV=1) HSP 1 Score: 465.692 bits (1197), Expect = 2.506e-164 Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 0 Query: 57 MSMASLIKPTLLVHRSSHNHSNPTSTSLFLSPVILSFPFYRTTSFLHLRVSAALRSDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDDEGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQGGRR 282
MSMASLIKPTLLVHRSSHNHSNPTSTSLFLSPVILSFPFYRTTSFLHLRVSAALRSDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEK+EGESEDDEGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQGGRR
Sbjct: 1 MSMASLIKPTLLVHRSSHNHSNPTSTSLFLSPVILSFPFYRTTSFLHLRVSAALRSDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKEEGESEDDEGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQGGRR 226
BLAST of CMJ_chr3_023980.1 vs. ExPASy TrEMBL
Match: V4T482|V4T482_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002377mg PE=4 SV=1) HSP 1 Score: 461.84 bits (1187), Expect = 1.008e-162 Identity = 223/226 (98.67%), Postives = 224/226 (99.12%), Query Frame = 0 Query: 57 MSMASLIKPTLLVHRSSHNHSNPTSTSLFLSPVILSFPFYRTTSFLHLRVSAALRSDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDDEGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQGGRR 282
MSMASL+KPT LVHRSSHNHSNPTSTSLFLSPVILSFPFYR TSFLHLRVSAALRSDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDDEGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQGGRR
Sbjct: 1 MSMASLVKPTPLVHRSSHNHSNPTSTSLFLSPVILSFPFYRMTSFLHLRVSAALRSDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDDEGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQGGRR 226
BLAST of CMJ_chr3_023980.1 vs. ExPASy TrEMBL
Match: A0A5C7H5T3|A0A5C7H5T3_9ROSI (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_021587 PE=4 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 1.535e-111 Identity = 178/234 (76.07%), Postives = 192/234 (82.05%), Query Frame = 0 Query: 57 MSMASLIKPTLLVHRSSHNHSNPTSTSLFLSPVILSFPFYRTTSFLHLRVSAALRSDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDDE-----------GWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQG 279
MSMAS+ KP VHR HSNPTS L SPVILSFPFYR TS L LRVSA L+S+GDKIGSQES G NLLRKP++S SRDL GNS+K+E E++E WIDWEDKILE+TVPLVGFVRM+LHSGRYESG RL PEHE TILERLLPYHPEFEKKIGCGIDYITIGYHP+FE SRCLF+VRKDGEL+DFSYWKCIKGLIRKNYPLYADSFILRHFR RHR G
Sbjct: 1 MSMASITKPPPFVHR----HSNPTS--LCSSPVILSFPFYRPTS-LRLRVSA-LKSNGDKIGSQESYGSNLLRKPIISSTSRDLSGNSDKEESSDEEEEEDDEEEEEEEEAWIDWEDKILEETVPLVGFVRMLLHSGRYESGARLDPEHETTILERLLPYHPEFEKKIGCGIDYITIGYHPEFEGSRCLFVVRKDGELIDFSYWKCIKGLIRKNYPLYADSFILRHFR-RHRSG 225
BLAST of CMJ_chr3_023980.1 vs. ExPASy TrEMBL
Match: A0A2P6Q0I5|A0A2P6Q0I5_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0308021 PE=4 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 1.998e-94 Identity = 149/220 (67.73%), Postives = 166/220 (75.45%), Query Frame = 0 Query: 59 MASLIKPTLLVHRSSHNHSNPTSTSLFLSPVILSFPFYRTTSFLHLRVSAALRSDG-DKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDDEGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHR 277
MASL KP LLVH N S+ + P LSFP +TTS + +DG + G QE+ G LLRKPVV D+DG SE+DEGE D W+DWEDKILEDTVPLVGFVRMILHSG+YESG RLSPEHE+T+LERLLP+HPE KKIG GIDY+T+GYHPDFESSRCLFIV+KDG LVDFSYWKCIKGLIRKNYPLYADSFILRHFR R R
Sbjct: 1 MASLSKPPLLVH-------NHLSSLALIGPATLSFPIAKTTSLRTRLCALKTGADGGSRTGRQEADGPELLRKPVVKDV--DVDGISEEDEGE---DGKWVDWEDKILEDTVPLVGFVRMILHSGKYESGDRLSPEHEKTVLERLLPFHPEAAKKIGSGIDYVTVGYHPDFESSRCLFIVQKDGTLVDFSYWKCIKGLIRKNYPLYADSFILRHFRKRRR 208
BLAST of CMJ_chr3_023980.1 vs. ExPASy TrEMBL
Match: A0A7J9CXA9|A0A7J9CXA9_GOSGO (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_019794 PE=4 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 5.947e-94 Identity = 155/218 (71.10%), Postives = 174/218 (79.82%), Query Frame = 0 Query: 59 MASLIKPTLLVHRSSHNHSNPTSTSLFLSPVILSFPFYRTTSFLHLRVSAALR--SDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEG-ESEDDEG-WIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF 272
MAS++ P + H S PTS S SPVILS+PF++TTS L +R A LR SDG KIGSQE+ G + LRKP P +D DG E++EG E + + G W DWED+ILEDTVPLVGFVRMI+HSG+Y +G RLSPEHERTILERLLPYHPEFEKKIGCGIDYIT+GYHPDF SRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF
Sbjct: 1 MASILNPPPPPY--FHRTSMPTSVSS--SPVILSYPFFKTTS-LQVRFKA-LRTWSDGGKIGSQEAYGADFLRKPSTVP-KKDSDGILEEEEGSEGKRNRGEWTDWEDRILEDTVPLVGFVRMIIHSGKYGAGDRLSPEHERTILERLLPYHPEFEKKIGCGIDYITVGYHPDFVGSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF 211
BLAST of CMJ_chr3_023980.1 vs. ExPASy TrEMBL
Match: A0A5D2UFV3|A0A5D2UFV3_GOSMU (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D06G021600v1 PE=4 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.742e-93 Identity = 155/218 (71.10%), Postives = 173/218 (79.36%), Query Frame = 0 Query: 59 MASLIKPTLLVHRSSHNHSNPTSTSLFLSPVILSFPFYRTTSFLHLRVSAALR--SDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEG-ESEDDEG-WIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF 272
MAS++ P + H S PTS S SPVILS+PF +TTS L +R A LR SDG KIGSQE+ G + LRKP P +D DG E++EG E + + G W DWED+ILEDTVPLVGFVRMI+HSG+Y +G RLSPEHERTILERLLPYHPEFEKKIGCGIDYIT+GYHPDF SRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF
Sbjct: 1 MASILNPPPPPY--FHRTSMPTSVSS--SPVILSYPFLKTTS-LQVRFKA-LRTWSDGGKIGSQEAYGADFLRKPSTVP-KKDSDGILEEEEGSEGKRNRGEWTDWEDRILEDTVPLVGFVRMIIHSGKYGAGDRLSPEHERTILERLLPYHPEFEKKIGCGIDYITVGYHPDFVGSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF 211
BLAST of CMJ_chr3_023980.1 vs. ExPASy TrEMBL
Match: A0A5D2C132|A0A5D2C132_GOSDA (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D06G021500v1 PE=4 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.742e-93 Identity = 155/218 (71.10%), Postives = 173/218 (79.36%), Query Frame = 0 Query: 59 MASLIKPTLLVHRSSHNHSNPTSTSLFLSPVILSFPFYRTTSFLHLRVSAALR--SDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEG-ESEDDEG-WIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF 272
MAS++ P + H S PTS S SPVILS+PF +TTS L +R A LR SDG KIGSQE+ G + LRKP P +D DG E++EG E + + G W DWED+ILEDTVPLVGFVRMI+HSG+Y +G RLSPEHERTILERLLPYHPEFEKKIGCGIDYIT+GYHPDF SRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF
Sbjct: 1 MASILNPPPPPY--FHRTSMPTSVSS--SPVILSYPFLKTTS-LQVRFKA-LRTWSDGGKIGSQEAYGADFLRKPSTVP-KKDSDGILEEEEGSEGKRNRGEWTDWEDRILEDTVPLVGFVRMIIHSGKYGAGDRLSPEHERTILERLLPYHPEFEKKIGCGIDYITVGYHPDFVGSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF 211
BLAST of CMJ_chr3_023980.1 vs. ExPASy TrEMBL
Match: A0A0D2R0L6|A0A0D2R0L6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G020200 PE=4 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.742e-93 Identity = 155/218 (71.10%), Postives = 173/218 (79.36%), Query Frame = 0 Query: 59 MASLIKPTLLVHRSSHNHSNPTSTSLFLSPVILSFPFYRTTSFLHLRVSAALR--SDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEG-ESEDDEG-WIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF 272
MAS++ P + H S PTS S SPVILS+PF +TTS L +R A LR SDG KIGSQE+ G + LRKP P +D DG E++EG E + + G W DWED+ILEDTVPLVGFVRMI+HSG+Y +G RLSPEHERTILERLLPYHPEFEKKIGCGIDYIT+GYHPDF SRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF
Sbjct: 1 MASILNPPPPPY--FHRTSMPTSVSS--SPVILSYPFLKTTS-LQVRFKA-LRTWSDGGKIGSQEAYGADFLRKPSTVP-KKDSDGILEEEEGSEGKRNRGEWTDWEDRILEDTVPLVGFVRMIIHSGKYGAGDRLSPEHERTILERLLPYHPEFEKKIGCGIDYITVGYHPDFVGSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF 211
BLAST of CMJ_chr3_023980.1 vs. ExPASy TrEMBL
Match: A0A2P5Y862|A0A2P5Y862_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D06G019800v1 PE=4 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.742e-93 Identity = 155/218 (71.10%), Postives = 173/218 (79.36%), Query Frame = 0 Query: 59 MASLIKPTLLVHRSSHNHSNPTSTSLFLSPVILSFPFYRTTSFLHLRVSAALR--SDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEG-ESEDDEG-WIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF 272
MAS++ P + H S PTS S SPVILS+PF +TTS L +R A LR SDG KIGSQE+ G + LRKP P +D DG E++EG E + + G W DWED+ILEDTVPLVGFVRMI+HSG+Y +G RLSPEHERTILERLLPYHPEFEKKIGCGIDYIT+GYHPDF SRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF
Sbjct: 1 MASILNPPPPPY--FHRTSMPTSVSS--SPVILSYPFLKTTS-LQVRFKA-LRTWSDGGKIGSQEAYGADFLRKPSTVP-KKDSDGILEEEEGSEGKRNRGEWTDWEDRILEDTVPLVGFVRMIIHSGKYGAGDRLSPEHERTILERLLPYHPEFEKKIGCGIDYITVGYHPDFVGSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHF 211
BLAST of CMJ_chr3_023980.1 vs. ExPASy Swiss-Prot
Match: DCL_ARATH (Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DCL PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 2.870e-78 Identity = 127/193 (65.80%), Postives = 148/193 (76.68%), Query Frame = 0 Query: 87 SPVILSFPFYRTTSFLHLRVSAA-LRSDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDDEGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQ 278
SP+ L FP +TS L RV A SDG KIG+ ES G LLR+P ++ + E++E D+ ++DWEDKILE TVPLVGFVRMILHSG+Y + RLSPEHERTI+E LLPYHPE EKKIGCGIDYI +G+HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI+K YPLYADSFILRHFR R +
Sbjct: 29 SPLCLYFPRGDSTS-LRPRVRALRTESDGAKIGNSESYGSELLRRPRIASEESSEEEEEEEEENSEGDE--FVDWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVGHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQN 218
BLAST of CMJ_chr3_023980.1 vs. ExPASy Swiss-Prot
Match: DCL_SOLLC (Protein DCL, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DCL PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 3.421e-78 Identity = 123/185 (66.49%), Postives = 142/185 (76.76%), Query Frame = 0 Query: 102 LHLRVSAALRSDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDD--------EGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQ 278
L L AA+++ G + G S LLRKPV+S + E + ES+D+ EGW+DWED+ILEDTVPLVGFVRMILHSG+Y G RLSP+H+RTIL+RLLPYHPE +KKIG G+DYIT+GYHPDFE+SRCLFIVRKDGE VDFSYWKCIKGLIRKNYPLYADSFILRHFR R R
Sbjct: 40 LRLCRCAAVKT-GSEGGGIRSDNAELLRKPVISTELETTSESEELVKEESDDEVGKKSGDGEGWVDWEDQILEDTVPLVGFVRMILHSGKYAIGDRLSPDHQRTILQRLLPYHPECDKKIGPGVDYITVGYHPDFENSRCLFIVRKDGETVDFSYWKCIKGLIRKNYPLYADSFILRHFRKRRRN 223
BLAST of CMJ_chr3_023980.1 vs. ExPASy Swiss-Prot
Match: NRPE1_ARATH (DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPE1 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.331e-21 Identity = 46/122 (37.70%), Postives = 71/122 (58.20%), Query Frame = 0 Query: 161 EDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQGGRR 282
E ++L D P++ +R I+H Y G +S + + +LE++L +HP+ E K+G G+D+IT+ H F SRC F+V DG DFSY K + + K YP A+ FI ++F + R G R
Sbjct: 1736 EQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFT-KPRPSGNR 1856
BLAST of CMJ_chr3_023980.1 vs. Araport11
Match: AT1G45230.1 (| DCL protein (DUF3223) | Chr1:17169874-17171381 REVERSE LENGTH=219 | 201606) HSP 1 Score: 240.736 bits (613), Expect = 2.937e-79 Identity = 127/193 (65.80%), Postives = 148/193 (76.68%), Query Frame = 0 Query: 87 SPVILSFPFYRTTSFLHLRVSAA-LRSDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDDEGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQ 278
SP+ L FP +TS L RV A SDG KIG+ ES G LLR+P ++ + E++E D+ ++DWEDKILE TVPLVGFVRMILHSG+Y + RLSPEHERTI+E LLPYHPE EKKIGCGIDYI +G+HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI+K YPLYADSFILRHFR R +
Sbjct: 29 SPLCLYFPRGDSTS-LRPRVRALRTESDGAKIGNSESYGSELLRRPRIASEESSEEEEEEEEENSEGDE--FVDWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVGHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQN 218
BLAST of CMJ_chr3_023980.1 vs. Araport11
Match: AT1G45230.2 (| DCL protein (DUF3223) | Chr1:17169874-17171381 REVERSE LENGTH=219 | 201606) HSP 1 Score: 236.113 bits (601), Expect = 1.700e-77 Identity = 126/193 (65.28%), Postives = 147/193 (76.17%), Query Frame = 0 Query: 87 SPVILSFPFYRTTSFLHLRVSAA-LRSDGDKIGSQESQGFNLLRKPVVSPASRDLDGNSEKDEGESEDDEGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQ 278
SP+ L FP +TS L RV A SDG KIG+ ES G LLR+P ++ + E++E D+ ++DWEDKILE TVPLVGFVRMILHSG+Y + RLSPEHERTI+E LLPYHPE EKKIGCGIDYI + +HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI+K YPLYADSFILRHFR R +
Sbjct: 29 SPLCLYFPRGDSTS-LRPRVRALRTESDGAKIGNSESYGSELLRRPRIASEESSEEEEEEEEENSEGDE--FVDWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVWHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQN 218
BLAST of CMJ_chr3_023980.1 vs. Araport11
Match: AT3G46630.1 (| DCL protein (DUF3223) | Chr3:17181138-17182346 REVERSE LENGTH=207 | 201606) HSP 1 Score: 129.798 bits (325), Expect = 3.047e-36 Identity = 59/124 (47.58%), Postives = 79/124 (63.71%), Query Frame = 0 Query: 150 ESEDDEGWIDWEDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFR 273
E D W + E +IL D P+ + ILHS RY G RL E E+ ++E+LLPYHP + KIGCG+D+I + HP F SRCLF+VR DG +DFSY KC++ +R YP +A+ FI HF+
Sbjct: 80 EDPDYRKWKNLEAEILRDIEPISLLAKEILHSDRYLDGERLDFEDEKIVMEKLLPYHPYSKDKIGCGLDFIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYVRDKYPSHAERFIREHFK 203
BLAST of CMJ_chr3_023980.1 vs. Araport11
Match: AT2G40030.1 (| nuclear RNA polymerase D1B | Chr2:16715089-16723406 FORWARD LENGTH=1976 | 201606) HSP 1 Score: 97.0561 bits (240), Expect = 5.454e-22 Identity = 46/122 (37.70%), Postives = 71/122 (58.20%), Query Frame = 0 Query: 161 EDKILEDTVPLVGFVRMILHSGRYESGVRLSPEHERTILERLLPYHPEFEKKIGCGIDYITIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRWRHRQGGRR 282
E ++L D P++ +R I+H Y G +S + + +LE++L +HP+ E K+G G+D+IT+ H F SRC F+V DG DFSY K + + K YP A+ FI ++F + R G R
Sbjct: 1736 EQELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFT-KPRPSGNR 1856 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_023980.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_023980.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 3 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_023980.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 4 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_023980.1_cmj_v1 ID=CMJ_chr3_023980.1_cmj_v1; Name=CMJ_chr3_023980.1; organism=Citrus maxima; type=mRNA; length=936bpback to top protein sequence of CMJ_chr3_023980.1_cmj_v1 >CMJ_chr3_023980.1_cmj_v1 ID=CMJ_chr3_023980.1_cmj_v1; Name=CMJ_chr3_023980.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=312bpback to top mRNA from alignment at chr3:39588656..39592942- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=4287bp; location=Sequence derived from: chr3:39588656..39592942- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:39588656..39592942- >CMJ_chr3_023980.1_cmj_v1 ID=CMJ_chr3_023980.1_cmj_v1; Name=CMJ_chr3_023980.1; organism=Citrus maxima; type=CDS; length=936bp; location=Sequence derived from: chr3:39588656..39592942- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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