CMJ_chr3_025160.2 | Citrus Genome Database

Transcript Overview


Name	CMJ_chr3_025160.2
Unique Name	CMJ_chr3_025160.2_cmj_v1
Type	mRNA
Organism	Citrus maxima (Pomelo, pummelo)
Sequence length	1194

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Citrus maxima Cupi Majiayou v1.0 genome	2023-05-10
InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins	2023-05-12
Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL	2023-05-15
Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot	2023-05-15
Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11	2023-05-15

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
cllcmjL199	Citrus linwuensis cv. LW genome v1.0	Citrus linwuensis
caacmjL503	Citrus australasica cv. AZM genome v1.0	Citrus australasica
clxcmjL488	Citrus limon cv. Xiangshui genome v1.0	Citrus limon

Orthologs


Gene/Transcript	Assembly	Species
evm.model.ctg156.78	Citrus limon cv. Xiangshui genome v1.0	Citrus limon
LW030400.6	Citrus linwuensis cv. LW genome v1.0	Citrus linwuensis
Egl087360.2	Citrus australasica cv. AZM genome v1.0	Citrus australasica

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CMJ_chr3_025160	CMJ_chr3_025160_cmj_v1	Citrus maxima	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CMJ_chr3_025160.2.utr5.1	CMJ_chr3_025160.2.utr5.1_cmj_v1	Citrus maxima	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CMJ_chr3_025160.2.exon1	CMJ_chr3_025160.2.exon1_cmj_v1	Citrus maxima	exon
CMJ_chr3_025160.2.exon2	CMJ_chr3_025160.2.exon2_cmj_v1	Citrus maxima	exon
CMJ_chr3_025160.2.exon3	CMJ_chr3_025160.2.exon3_cmj_v1	Citrus maxima	exon
CMJ_chr3_025160.2.exon4	CMJ_chr3_025160.2.exon4_cmj_v1	Citrus maxima	exon
CMJ_chr3_025160.2.exon5	CMJ_chr3_025160.2.exon5_cmj_v1	Citrus maxima	exon
CMJ_chr3_025160.2.exon6	CMJ_chr3_025160.2.exon6_cmj_v1	Citrus maxima	exon
CMJ_chr3_025160.2.exon7	CMJ_chr3_025160.2.exon7_cmj_v1	Citrus maxima	exon
CMJ_chr3_025160.2.exon8	CMJ_chr3_025160.2.exon8_cmj_v1	Citrus maxima	exon
CMJ_chr3_025160.2.exon9	CMJ_chr3_025160.2.exon9_cmj_v1	Citrus maxima	exon
CMJ_chr3_025160.2.exon10	CMJ_chr3_025160.2.exon10_cmj_v1	Citrus maxima	exon
CMJ_chr3_025160.2.exon11	CMJ_chr3_025160.2.exon11_cmj_v1	Citrus maxima	exon
CMJ_chr3_025160.2.exon12	CMJ_chr3_025160.2.exon12_cmj_v1	Citrus maxima	exon
CMJ_chr3_025160.2.exon13	CMJ_chr3_025160.2.exon13_cmj_v1	Citrus maxima	exon
CMJ_chr3_025160.2.exon14	CMJ_chr3_025160.2.exon14_cmj_v1	Citrus maxima	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CMJ_chr3_025160.2.cds.1	CMJ_chr3_025160.2.cds.1_cmj_v1	Citrus maxima	CDS
CMJ_chr3_025160.2.cds.2	CMJ_chr3_025160.2.cds.2_cmj_v1	Citrus maxima	CDS
CMJ_chr3_025160.2.cds.3	CMJ_chr3_025160.2.cds.3_cmj_v1	Citrus maxima	CDS
CMJ_chr3_025160.2.cds.4	CMJ_chr3_025160.2.cds.4_cmj_v1	Citrus maxima	CDS
CMJ_chr3_025160.2.cds.5	CMJ_chr3_025160.2.cds.5_cmj_v1	Citrus maxima	CDS
CMJ_chr3_025160.2.cds.6	CMJ_chr3_025160.2.cds.6_cmj_v1	Citrus maxima	CDS
CMJ_chr3_025160.2.cds.7	CMJ_chr3_025160.2.cds.7_cmj_v1	Citrus maxima	CDS
CMJ_chr3_025160.2.cds.8	CMJ_chr3_025160.2.cds.8_cmj_v1	Citrus maxima	CDS
CMJ_chr3_025160.2.cds.9	CMJ_chr3_025160.2.cds.9_cmj_v1	Citrus maxima	CDS
CMJ_chr3_025160.2.cds.10	CMJ_chr3_025160.2.cds.10_cmj_v1	Citrus maxima	CDS
CMJ_chr3_025160.2.cds.11	CMJ_chr3_025160.2.cds.11_cmj_v1	Citrus maxima	CDS
CMJ_chr3_025160.2.cds.12	CMJ_chr3_025160.2.cds.12_cmj_v1	Citrus maxima	CDS
CMJ_chr3_025160.2.cds.13	CMJ_chr3_025160.2.cds.13_cmj_v1	Citrus maxima	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CMJ_chr3_025160.2.utr3.1	CMJ_chr3_025160.2.utr3.1_cmj_v1	Citrus maxima	three_prime_UTR
CMJ_chr3_025160.2.utr3.2	CMJ_chr3_025160.2.utr3.2_cmj_v1	Citrus maxima	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CMJ_chr3_025160.2_cmj_v1	CMJ_chr3_025160.2_cmj_v1	Citrus maxima	polypeptide
CMJ_chr3_025160.2_cmj_v1	CMJ_chr3_025160.2_cmj_v1-protein	Citrus maxima	polypeptide

Homology

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy TrEMBL
Match: V4V7X6|V4V7X6_CITCL (PCI domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10001386mg PE=4 SV=1)

HSP 1 Score: 805.438 bits (2079), Expect = 0.000e+0
Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0

Query:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 397
            MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV
Sbjct:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 397

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy TrEMBL
Match: A0A067GXP7|A0A067GXP7_CITSI (PCI domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g013430mg PE=4 SV=1)

HSP 1 Score: 805.438 bits (2079), Expect = 0.000e+0
Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0

Query:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 397
            MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV
Sbjct:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 397

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy TrEMBL
Match: A0A067H9Q3|A0A067H9Q3_CITSI (PCI domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g013430mg PE=4 SV=1)

HSP 1 Score: 779.245 bits (2011), Expect = 0.000e+0
Identity = 396/443 (89.39%), Postives = 397/443 (89.62%), Query Frame = 0

Query:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDH----------------------------------------------MLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 397
            MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDH                                              +LSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV
Sbjct:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHSYLSPSLSIFLIKNFRLGFFEIHYFGRKQIFVRPYPFSIFKFFFCAVLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 443

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy TrEMBL
Match: A0A067KQI5|A0A067KQI5_JATCU (PCI domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_04406 PE=4 SV=1)

HSP 1 Score: 777.704 bits (2007), Expect = 0.000e+0
Identity = 380/397 (95.72%), Postives = 390/397 (98.24%), Query Frame = 0

Query:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 397
            MESALASASAITDQRQKIEQYKHIL+SVISSNDIVQ+KKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPET KEIA+YTL QIQPRVVSFEEQVLIIREKLA+LYESEQQWSKAAQMLSGIDLDSGMRV+DDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS+SQ EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI+KRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELK HQKALLPDNFTVLDRAMIEHNLLSASKLYTNISF+ELGTLLGI P KAEKIASRMI+EDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALND+LDSMAKKGL IPV
Sbjct:    1 MESALASASAITDQRQKIEQYKHILASVISSNDIVQSKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETHKEIAHYTLTQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVVDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDVLDSMAKKGLSIPV 397

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy TrEMBL
Match: B9R7R6|B9R7R6_RICCO (Cop9 complex subunit, putative OS=Ricinus communis OX=3988 GN=RCOM_1593880 PE=4 SV=1)

HSP 1 Score: 774.237 bits (1998), Expect = 0.000e+0
Identity = 380/397 (95.72%), Postives = 390/397 (98.24%), Query Frame = 0

Query:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 397
            MESA ASASAITDQRQKIEQYKHIL+SVISSNDI QAKKFIDHMLSDDVPLVVSRQLLQ+FAQELGRLEP+TQKEIA+YTLAQIQPRVVSFEEQVLIIREKLA+LYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS+SQ EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI+KRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELK HQKALLPDNFTVLDRAMIEHNLLSASKLYTNISF+ELGTLLGI P KAEKIASRMI+EDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALND+LDSMAKKGL IPV
Sbjct:    1 MESAFASASAITDQRQKIEQYKHILASVISSNDIDQAKKFIDHMLSDDVPLVVSRQLLQSFAQELGRLEPDTQKEIAHYTLAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDVLDSMAKKGLSIPV 397

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy TrEMBL
Match: A0A4U5MCG3|A0A4U5MCG3_POPAL (PCI domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000312360 PE=4 SV=1)

HSP 1 Score: 771.155 bits (1990), Expect = 0.000e+0
Identity = 379/397 (95.47%), Postives = 386/397 (97.23%), Query Frame = 0

Query:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 397
            ME   ASAS ITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFA ELGRLEPETQKEIA+YTLAQIQPRVVSFEEQVLIIREKLA+LYESEQQWSKAAQMLSGIDLDSGMRVIDD+FRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQ EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI+KRQI DETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAF+EELK HQKALLPDNFTVLDRAMIEHNLLSASKLYTNISF ELGTLLGI P KAEKIASRMI+EDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALND+LDSMAKKGLPIPV
Sbjct:    1 MEIVFASASTITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAHELGRLEPETQKEIAHYTLAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDDSFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIEDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFSEELKAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFGELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDVLDSMAKKGLPIPV 397

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy TrEMBL
Match: A0A1R3HXY8|A0A1R3HXY8_9ROSI (PCI domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_26343 PE=4 SV=1)

HSP 1 Score: 769.229 bits (1985), Expect = 0.000e+0
Identity = 376/397 (94.71%), Postives = 388/397 (97.73%), Query Frame = 0

Query:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 397
            MESALA+ASAI DQRQKIEQYKHILS+V SSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPE QKEIA+YTLAQIQPRVVSFEEQVLIIREKLA+LYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS+SQ EVL LQYKVCYARILDLKRKFLEAALRYYDISQI+KRQIGDETIDE+ALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISF+ELGTLLGI P KAEKIASRMI+EDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVG+CQALNDILD MAKKG+ +PV
Sbjct:   33 MESALANASAIVDQRQKIEQYKHILSTVFSSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPEAQKEIAHYTLAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLILQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDETIDEDALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGVCQALNDILDGMAKKGMSVPV 429

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy TrEMBL
Match: A0A6J1AAD5|A0A6J1AAD5_9ROSI (COP9 signalosome complex subunit 4 OS=Herrania umbratica OX=108875 GN=LOC110416183 PE=4 SV=1)

HSP 1 Score: 768.844 bits (1984), Expect = 0.000e+0
Identity = 376/397 (94.71%), Postives = 388/397 (97.73%), Query Frame = 0

Query:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 397
            MESALA+ASAI DQRQKIEQYKHILSSV SSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPE QKEIA+YTLAQIQPRVVSFEEQVLIIREKLA+LYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS+SQ EVL LQYKVCYARILDLKRKFLEAALRYYDISQI KRQIGDETIDE+ALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAF+EELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISF+ELGTLLGI P KAEKIASRMI+EDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVG+CQALNDILD+MAKKG+ +PV
Sbjct:    1 MESALANASAIVDQRQKIEQYKHILSSVFSSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPEAQKEIAHYTLAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLILQYKVCYARILDLKRKFLEAALRYYDISQIAKRQIGDETIDEDALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFSEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGVCQALNDILDTMAKKGMAVPV 397

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BLAST of CMJ_chr3_025160.2 vs. ExPASy TrEMBL
Match: A0A061FCH0|A0A061FCH0_THECC (Proteasome component (PCI) domain protein OS=Theobroma cacao OX=3641 GN=TCM_034010 PE=4 SV=1)

HSP 1 Score: 768.459 bits (1983), Expect = 0.000e+0
Identity = 374/397 (94.21%), Postives = 389/397 (97.98%), Query Frame = 0

Query:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 397
            MESALA+ASAI DQRQKIEQYKHILS+V SSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPE QKEIA+YTLAQIQPRVVSFEEQVLIIREKLA+LYESEQQWSKAAQMLSGIDLDSGMRV+DDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS+SQ EVL LQYKVCYARILDLKRKFLEAALRYYDISQI+KRQIGDETIDE+ALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAF+EELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISF+ELGTLLGI P KAEKIASRMI+EDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVG+CQALNDILD+MAKKG+ +PV
Sbjct:    1 MESALANASAIVDQRQKIEQYKHILSTVFSSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPEAQKEIAHYTLAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVVDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLILQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDETIDEDALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFSEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGVCQALNDILDTMAKKGMAVPV 397

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BLAST of CMJ_chr3_025160.2 vs. ExPASy TrEMBL
Match: B9IB60|B9IB60_POPTR (PCI domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G180800 PE=4 SV=1)

HSP 1 Score: 766.918 bits (1979), Expect = 0.000e+0
Identity = 377/397 (94.96%), Postives = 385/397 (96.98%), Query Frame = 0

Query:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 397
            ME   ASAS ITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFA ELGRLEPETQKEIA+YTLAQIQPRVVSFEEQVLIIREKLA+LYESEQQWSKAAQMLSGIDLDSGMRVIDD+FRLSKCVQIARLYLEDDDAVNAEAFINKASFLVS+SQ EVLNLQYKVCYARILDLKRKFLEAALRYYDISQI+KRQI DETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAF+EELK HQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGI P KAEKIASRMI+EDRMRGSIDQVEAVIHFEDDT ELQQWDQQIVGLCQALND+LDSMAKKGL IPV
Sbjct:    1 MEIVFASASTITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAHELGRLEPETQKEIAHYTLAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDDSFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIEDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFSEELKAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHFEDDTVELQQWDQQIVGLCQALNDVLDSMAKKGLSIPV 397

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BLAST of CMJ_chr3_025160.2 vs. ExPASy Swiss-Prot
Match: CSN4_ARATH (COP9 signalosome complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=CSN4 PE=1 SV=2)

HSP 1 Score: 704.901 bits (1818), Expect = 0.000e+0
Identity = 341/397 (85.89%), Postives = 369/397 (92.95%), Query Frame = 0

Query:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 397
            M+ AL +ASAI DQRQKIEQYK ILSSV+SSND++QA++FIDH+LSDDVPLVVSRQLLQ+FAQELGRLEPETQKEIA +TL QIQPRVVSFEEQ L+IREKLA LYESEQ+WSKAAQMLSGIDLDSGMR +DD F+LSKC+QIARLYLEDDDAVNAEAFINKASFLVS+SQ EVLNLQYKVCYARILD+KRKFLEAALRYY ISQI++RQIGDE IDE ALEQALSAAVTCTILA AGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILR+PEIDAF+EEL+PHQKA LPD  TVLDRAMIEHNLLSASKLYTNI F+ELGTLL I P+KAEKIA+ MI +DRMRGSIDQ EAVIHFEDD EELQQWDQQI GLCQALNDILD MAKKG+ +PV
Sbjct:    1 MDEALTNASAIGDQRQKIEQYKLILSSVLSSNDLLQAQRFIDHILSDDVPLVVSRQLLQSFAQELGRLEPETQKEIAQFTLTQIQPRVVSFEEQALVIREKLAGLYESEQEWSKAAQMLSGIDLDSGMRAVDDNFKLSKCIQIARLYLEDDDAVNAEAFINKASFLVSNSQNEVLNLQYKVCYARILDMKRKFLEAALRYYGISQIEQRQIGDEEIDENALEQALSAAVTCTILAGAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRRPEIDAFSEELRPHQKASLPDKSTVLDRAMIEHNLLSASKLYTNIRFDELGTLLAIDPRKAEKIAANMIGQDRMRGSIDQEEAVIHFEDDVEELQQWDQQISGLCQALNDILDGMAKKGMSVPV 397

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BLAST of CMJ_chr3_025160.2 vs. ExPASy Swiss-Prot
Match: CSN4_DICDI (COP9 signalosome complex subunit 4 OS=Dictyostelium discoideum OX=44689 GN=csn4 PE=2 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 2.495e-126
Identity = 191/390 (48.97%), Postives = 268/390 (68.72%), Query Frame = 0

Query:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 390
            ++  L   SA++D + K E+YK IL  ++ S  +   K FI H+  +  PLV+SR +L +F      L  + Q E+  + L +IQ RVV+FEEQV  IR  LA LYE ++ W ++A+ L  I LDS  RVI   +++   V+IARL+LE++++  AE +IN+AS  +   + + L L +K C+ARI+D KR FL+A+LRYYD+SQ   +       D E +  ALS A+ C IL  AGPQRSR LATLYKDER  +L +Y  L+K++LERIL+K E+  FAE+LKPHQ ALL D  TVLDRA+IEHNLLSASKLY NI+F+ELG+LL I  +KAEK+AS+M+ E+R+ GSIDQ+E +I FE+  + L QWD++I GLC  +N+I++S++K
Sbjct:    6 LKQILEETSALSDHKTKTEKYKSILQQLVESKQVAPLKVFITHLTDESTPLVISRTILLSFTSSHKTLPEDIQMELGIFVLDRIQNRVVAFEEQVSEIRYNLAKLYERQENWRESARCLIAIPLDSSQRVISPEYKVKIYVKIARLFLEEEESGQAETYINRASDSLHLVKNQKLILAHKTCFARIMDYKRMFLKASLRYYDLSQCLPK-------DTERM-HALSCAIVCAILDKAGPQRSRTLATLYKDERSQQLGVYTFLEKMFLERILKKTEVKKFAEQLKPHQMALLSDGNTVLDRAVIEHNLLSASKLYNNITFDELGSLLEIQAEKAEKVASKMVCEERLIGSIDQIERLIQFENVGDSLTQWDKKIEGLCIHMNNIIESISK 387

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BLAST of CMJ_chr3_025160.2 vs. ExPASy Swiss-Prot
Match: CSN4_BOVIN (COP9 signalosome complex subunit 4 OS=Bos taurus OX=9913 GN=COPS4 PE=2 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.170e-124
Identity = 195/374 (52.14%), Postives = 262/374 (70.05%), Query Frame = 0

Query:   20 QYKHILSSVI--SSNDIVQA-KKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 390
            +Y+ IL   I  S  + ++A K F++ M++++V LV+SRQLL  F   L  L   T KEI ++TL +IQPRV+SFEEQV  IR+ LA +YE E+ W  AAQ+L GI L++G +  +  ++L   ++IARLYLEDDD V AEA+IN+AS L + S  E L + YKVCYAR+LD +RKF+EAA RY ++S    + I  E+   EAL+ AL     CTILA+AG QRSR+LATL+KDERC +L  Y IL+K+YL+RI+R  ++  FA  L PHQKA   D  ++LDRA+IEHNLLSASKLY NI+FEELG LL I   KAEKIAS+MI E RM G IDQ++ ++HFE   E L  WD+QI  LC  +N++L+ +++
Sbjct:   25 KYRQILEKAIQLSGAEQLEALKAFVESMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWRNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELS---YKTIVHESERLEALKHALH----CTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREALPTWDKQIQSLCFQVNNLLEKISQ 390

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy Swiss-Prot
Match: CSN4_RAT (COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.347e-124
Identity = 193/374 (51.60%), Postives = 263/374 (70.32%), Query Frame = 0

Query:   20 QYKHILSSVI--SSNDIVQA-KKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 390
            +Y+ IL   I  S  + ++A K F++ M++++V LV+SRQLL  F   L  L   T KE+ ++TL ++QPRV+SFEEQV  IR++LA +YE E+ W  AAQ+L GI L++G +  +  ++L   ++IARLYLEDDD V AEA+IN+AS L + S  E L + YKVCYAR+LD +RKF+EAA RY ++S    + I  E+   EAL+ AL     CTILA+AG QRSR+LATL+KDERC +L  Y IL+K+YL+RI+R  ++  FA  L PHQKA   D  ++LDRA+IEHNLLSASKLY NI+FEELG LL I   KAEKIAS+MI E RM G IDQ++ ++HFE   E L  WD+QI  LC  +N++L+ +++
Sbjct:   25 KYRQILEKAIQLSGTEQLEALKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEVYHFTLEKVQPRVISFEEQVASIRQRLASIYEKEEDWRNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELS---YKTIVHESERLEALKHALH----CTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREALPTWDKQIQSLCFQVNNLLEKISQ 390

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy Swiss-Prot
Match: CSN4_PIG (COP9 signalosome complex subunit 4 OS=Sus scrofa OX=9823 GN=COPS4 PE=2 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.438e-124
Identity = 195/374 (52.14%), Postives = 262/374 (70.05%), Query Frame = 0

Query:   20 QYKHILSSVI--SSNDIVQA-KKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 390
            +Y+ IL   I  S  + ++A K F++ M++++V LV+SRQLL  F   L  L   T KEI ++TL +IQPRV+SFEEQV  IR+ LA +YE E+ W  AAQ+L GI L++G +  +  ++L   ++IARLYLEDDD V AEA+IN+AS L + S  E L + YKVCYAR+LD +RKF+EAA RY ++S    + I  E+   EAL+ AL     CTILA+AG QRSR+LATL+KDERC +L  Y IL+K+YL+RI+R  ++  FA  L PHQKA   D  ++LDRA+IEHNLLSASKLY NI+FEELG LL I   KAEKIAS+MI E RM G IDQ++ ++HFE   E L  WD+QI  LC  +N++L+ +++
Sbjct:   25 KYRQILEKAIQLSGAEQLEALKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWRNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELS---YKTIVHESERLEALKHALH----CTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREALPTWDKQIQSLCFQVNNLLEKISQ 390

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy Swiss-Prot
Match: CSN4_MACFA (COP9 signalosome complex subunit 4 OS=Macaca fascicularis OX=9541 GN=COPS4 PE=2 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.438e-124
Identity = 195/374 (52.14%), Postives = 262/374 (70.05%), Query Frame = 0

Query:   20 QYKHILSSVI--SSNDIVQA-KKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 390
            +Y+ IL   I  S  + ++A K F++ M++++V LV+SRQLL  F   L  L   T KEI ++TL +IQPRV+SFEEQV  IR+ LA +YE E+ W  AAQ+L GI L++G +  +  ++L   ++IARLYLEDDD V AEA+IN+AS L + S  E L + YKVCYAR+LD +RKF+EAA RY ++S    + I  E+   EAL+ AL     CTILA+AG QRSR+LATL+KDERC +L  Y IL+K+YL+RI+R  ++  FA  L PHQKA   D  ++LDRA+IEHNLLSASKLY NI+FEELG LL I   KAEKIAS+MI E RM G IDQ++ ++HFE   E L  WD+QI  LC  +N++L+ +++
Sbjct:   25 KYRQILEKAIQLSGAEQLEALKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWRNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELS---YKTIVHESERLEALKHALH----CTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREALPTWDKQIQSLCFQVNNLLEKISQ 390

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy Swiss-Prot
Match: CSN4_HUMAN (COP9 signalosome complex subunit 4 OS=Homo sapiens OX=9606 GN=COPS4 PE=1 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.438e-124
Identity = 195/374 (52.14%), Postives = 262/374 (70.05%), Query Frame = 0

Query:   20 QYKHILSSVI--SSNDIVQA-KKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 390
            +Y+ IL   I  S  + ++A K F++ M++++V LV+SRQLL  F   L  L   T KEI ++TL +IQPRV+SFEEQV  IR+ LA +YE E+ W  AAQ+L GI L++G +  +  ++L   ++IARLYLEDDD V AEA+IN+AS L + S  E L + YKVCYAR+LD +RKF+EAA RY ++S    + I  E+   EAL+ AL     CTILA+AG QRSR+LATL+KDERC +L  Y IL+K+YL+RI+R  ++  FA  L PHQKA   D  ++LDRA+IEHNLLSASKLY NI+FEELG LL I   KAEKIAS+MI E RM G IDQ++ ++HFE   E L  WD+QI  LC  +N++L+ +++
Sbjct:   25 KYRQILEKAIQLSGAEQLEALKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWRNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELS---YKTIVHESERLEALKHALH----CTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREALPTWDKQIQSLCFQVNNLLEKISQ 390

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy Swiss-Prot
Match: CSN4_MOUSE (COP9 signalosome complex subunit 4 OS=Mus musculus OX=10090 GN=Cops4 PE=1 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 1.586e-124
Identity = 194/374 (51.87%), Postives = 262/374 (70.05%), Query Frame = 0

Query:   20 QYKHILSSVI--SSNDIVQA-KKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 390
            +Y+ IL   I  S  + ++A K F++ M++++V LV+SRQLL  F   L  L   T KE+ ++TL +IQPRV+SFEEQV  IR+ LA +YE E+ W  AAQ+L GI L++G +  +  ++L   ++IARLYLEDDD V AEA+IN+AS L + S  E L + YKVCYAR+LD +RKF+EAA RY ++S    + I  E+   EAL+ AL     CTILA+AG QRSR+LATL+KDERC +L  Y IL+K+YL+RI+R  ++  FA  L PHQKA   D  ++LDRA+IEHNLLSASKLY NI+FEELG LL I   KAEKIAS+MI E RM G IDQ++ ++HFE   E L  WD+QI  LC  +N++L+ +++
Sbjct:   25 KYRQILEKAIQLSGTEQLEALKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEVYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWRNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELS---YKTIVHESERLEALKHALH----CTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREALPTWDKQIQSLCFQVNNLLEKISQ 390

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy Swiss-Prot
Match: CSN4_PONAB (COP9 signalosome complex subunit 4 OS=Pongo abelii OX=9601 GN=COPS4 PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.917e-124
Identity = 194/374 (51.87%), Postives = 262/374 (70.05%), Query Frame = 0

Query:   20 QYKHILSSVI--SSNDIVQA-KKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 390
            +Y+ IL   I  S  + ++A K F++ M++++V LV+SRQLL  F   L  L   T KEI ++TL +IQPRV+SFEEQV  +R+ LA +YE E+ W  AAQ+L GI L++G +  +  ++L   ++IARLYLEDDD V AEA+IN+AS L + S  E L + YKVCYAR+LD +RKF+EAA RY ++S    + I  E+   EAL+ AL     CTILA+AG QRSR+LATL+KDERC +L  Y IL+K+YL+RI+R  ++  FA  L PHQKA   D  ++LDRA+IEHNLLSASKLY NI+FEELG LL I   KAEKIAS+MI E RM G IDQ++ ++HFE   E L  WD+QI  LC  +N++L+ +++
Sbjct:   25 KYRQILEKAIQLSGAEQLEALKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASVRQHLASIYEKEEDWRNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELS---YKTIVHESERLEALKHALH----CTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREALPTWDKQIQSLCFQVNNLLEKISQ 390

[Close]

BLAST of CMJ_chr3_025160.2 vs. ExPASy Swiss-Prot
Match: CSN4_DANRE (COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN=cops4 PE=2 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 5.192e-124
Identity = 192/374 (51.34%), Postives = 259/374 (69.25%), Query Frame = 0

Query:   20 QYKHILSSVISSNDIVQA---KKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 390
            +Y+ IL   +   D  Q    K F++ M++++V LV+SRQLL  F   L  L  +  K + ++TL +IQPRV+SFEEQV  IR+ LA +YE ++ W  AAQ+L GI L++G +  +  ++L   ++IARLYLEDDD V AEA+IN+AS L + S  E L + YKVCYAR+LD +RKF+EAA RY ++S    + I  ET   EAL+ AL     CTILA+AG QRSR+LATL+KDERC +L  Y IL+K+YL+RI+R  ++  FA  L PHQKA   D  ++LDRA+IEHNLLSASKLY NI+FEELG LL I P KAEKIAS+MI E RM G IDQ++ ++HFE   E L  WD+QI  LC  +N++L+ +++
Sbjct:   25 KYRQILEKALQFTDAEQLEALKAFVEAMVNENVSLVISRQLLTDFCAHLPNLPDDIAKVVCHFTLEKIQPRVISFEEQVASIRQHLATIYEKQEDWRNAAQVLVGIPLETGQKQYNVDYKLDTYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELS---YKSIVHETERLEALKHALH----CTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPPAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREPLPTWDKQIQSLCFQVNNLLEKISQ 390

[Close]

BLAST of CMJ_chr3_025160.2 vs. Araport11
Match: AT5G42970.1 (| Proteasome component (PCI) domain protein | Chr5:17237470-17240649 REVERSE LENGTH=397 | 201606)

HSP 1 Score: 704.901 bits (1818), Expect = 0.000e+0
Identity = 341/397 (85.89%), Postives = 369/397 (92.95%), Query Frame = 0

Query:    1 MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIREKLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 397
            M+ AL +ASAI DQRQKIEQYK ILSSV+SSND++QA++FIDH+LSDDVPLVVSRQLLQ+FAQELGRLEPETQKEIA +TL QIQPRVVSFEEQ L+IREKLA LYESEQ+WSKAAQMLSGIDLDSGMR +DD F+LSKC+QIARLYLEDDDAVNAEAFINKASFLVS+SQ EVLNLQYKVCYARILD+KRKFLEAALRYY ISQI++RQIGDE IDE ALEQALSAAVTCTILA AGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILR+PEIDAF+EEL+PHQKA LPD  TVLDRAMIEHNLLSASKLYTNI F+ELGTLL I P+KAEKIA+ MI +DRMRGSIDQ EAVIHFEDD EELQQWDQQI GLCQALNDILD MAKKG+ +PV
Sbjct:    1 MDEALTNASAIGDQRQKIEQYKLILSSVLSSNDLLQAQRFIDHILSDDVPLVVSRQLLQSFAQELGRLEPETQKEIAQFTLTQIQPRVVSFEEQALVIREKLAGLYESEQEWSKAAQMLSGIDLDSGMRAVDDNFKLSKCIQIARLYLEDDDAVNAEAFINKASFLVSNSQNEVLNLQYKVCYARILDMKRKFLEAALRYYGISQIEQRQIGDEEIDENALEQALSAAVTCTILAGAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRRPEIDAFSEELRPHQKASLPDKSTVLDRAMIEHNLLSASKLYTNIRFDELGTLLAIDPRKAEKIAANMIGQDRMRGSIDQEEAVIHFEDDVEELQQWDQQISGLCQALNDILDGMAKKGMSVPV 397

The following BLAST results are available for this feature:

BLAST of CMJ_chr3_025160.2 vs. ExPASy TrEMBL
BLAST of CMJ_chr3_025160.2 vs. ExPASy Swiss-Prot
BLAST of CMJ_chr3_025160.2 vs. Araport11

BLAST of CMJ_chr3_025160.2 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
V4V7X6\|V4V7X6_CITCL	0.000e+0	100.00	PCI domain-containing protein OS=Citrus clementina...	[more]
A0A067GXP7\|A0A067GXP7_CITSI	0.000e+0	100.00	PCI domain-containing protein OS=Citrus sinensis O...	[more]
A0A067H9Q3\|A0A067H9Q3_CITSI	0.000e+0	89.39	PCI domain-containing protein OS=Citrus sinensis O...	[more]
A0A067KQI5\|A0A067KQI5_JATCU	0.000e+0	95.72	PCI domain-containing protein OS=Jatropha curcas O...	[more]
B9R7R6\|B9R7R6_RICCO	0.000e+0	95.72	Cop9 complex subunit, putative OS=Ricinus communis...	[more]
A0A4U5MCG3\|A0A4U5MCG3_POPAL	0.000e+0	95.47	PCI domain-containing protein OS=Populus alba OX=4...	[more]
A0A1R3HXY8\|A0A1R3HXY8_9ROSI	0.000e+0	94.71	PCI domain-containing protein OS=Corchorus olitori...	[more]
A0A6J1AAD5\|A0A6J1AAD5_9ROSI	0.000e+0	94.71	COP9 signalosome complex subunit 4 OS=Herrania umb...	[more]
A0A061FCH0\|A0A061FCH0_THECC	0.000e+0	94.21	Proteasome component (PCI) domain protein OS=Theob...	[more]
B9IB60\|B9IB60_POPTR	0.000e+0	94.96	PCI domain-containing protein OS=Populus trichocar...	[more]

BLAST of CMJ_chr3_025160.2 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
CSN4_ARATH	0.000e+0	85.89	COP9 signalosome complex subunit 4 OS=Arabidopsis ...	[more]
CSN4_DICDI	2.495e-126	48.97	COP9 signalosome complex subunit 4 OS=Dictyosteliu...	[more]
CSN4_BOVIN	1.170e-124	52.14	COP9 signalosome complex subunit 4 OS=Bos taurus O...	[more]
CSN4_RAT	1.347e-124	51.60	COP9 signalosome complex subunit 4 OS=Rattus norve...	[more]
CSN4_PIG	1.438e-124	52.14	COP9 signalosome complex subunit 4 OS=Sus scrofa O...	[more]
CSN4_MACFA	1.438e-124	52.14	COP9 signalosome complex subunit 4 OS=Macaca fasci...	[more]
CSN4_HUMAN	1.438e-124	52.14	COP9 signalosome complex subunit 4 OS=Homo sapiens...	[more]
CSN4_MOUSE	1.586e-124	51.87	COP9 signalosome complex subunit 4 OS=Mus musculus...	[more]
CSN4_PONAB	2.917e-124	51.87	COP9 signalosome complex subunit 4 OS=Pongo abelii...	[more]
CSN4_DANRE	5.192e-124	51.34	COP9 signalosome complex subunit 4 OS=Danio rerio ...	[more]

BLAST of CMJ_chr3_025160.2 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
AT5G42970.1	0.000e+0	85.89	\| Proteasome component (PCI) domain protein \| Chr5...	[more]

InterPro

Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 291..369 e-value: 9.4E-33 score: 113.7
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 268..361 e-value: 5.5E-17 score: 62.2
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 192..365 score: 20.238998
IPR040134	26S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4	PANTHER	PTHR10855	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4	coord: 4..391
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 292..368

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr3:40359847..40365133+
coding sequence from alignment at chr3:40359847..40365133+

mRNA sequence

>CMJ_chr3_025160.2_cmj_v1 ID=CMJ_chr3_025160.2_cmj_v1; Name=CMJ_chr3_025160.2; organism=Citrus maxima; type=mRNA; length=1194bp
ATGGAAAGTGCATTAGCGAGCGCCTCTGCTATCACTGACCAGAGGCAAAA
GATCGAACAGTATAAGCACATTCTCTCTTCTGTTATCTCTTCAAACGACA
TCGTTCAAGCCAAGAAATTCATCGATCACATGCTATCCGATGATGTACCA
TTGGTTGTTTCGCGTCAGCTGTTGCAGACTTTTGCTCAAGAGCTGGGGAG
ATTAGAACCGGAGACGCAAAAGGAAATTGCCAATTATACCCTCGCTCAGA
TTCAACCTCGTGTTGTCTCCTTCGAAGAACAGGTGTTAATTATCAGGGAG
AAACTTGCTGATTTATATGAATCTGAGCAGCAATGGTCAAAAGCAGCTCA
GATGCTTAGTGGAATTGATCTTGACTCTGGAATGAGAGTCATTGACGATA
CATTCAGGTTGTCGAAATGTGTCCAGATTGCTCGCCTATATCTTGAGGAT
GATGATGCTGTTAATGCAGAGGCTTTCATTAATAAAGCGTCATTCTTGGT
TAGCAGCAGTCAGCAGGAAGTGTTGAATCTACAGTACAAGGTTTGTTATG
CCAGGATTTTGGATTTGAAAAGGAAGTTCTTGGAAGCAGCACTACGTTAC
TATGATATATCTCAGATTCAGAAGCGGCAGATAGGAGACGAAACAATTGA
TGAGGAAGCATTGGAGCAAGCTCTGTCTGCTGCTGTGACATGTACAATTT
TGGCTGCTGCGGGTCCTCAACGCTCTCGTGTTCTTGCCACTCTGTACAAA
GATGAACGGTGTTCAAAATTGAAAATATATCCAATATTACAAAAGGTATA
TTTGGAGAGAATTTTGAGAAAACCTGAAATTGATGCATTCGCAGAAGAGC
TGAAACCTCATCAGAAAGCACTTCTGCCAGATAATTTTACCGTGCTGGAT
CGTGCCATGATTGAGCATAATCTTTTGAGCGCAAGCAAACTTTACACCAA
CATAAGTTTTGAAGAGTTGGGCACTTTGCTTGGTATTGCACCTCAAAAGG
CAGAGAAGATTGCATCAAGAATGATTTTTGAGGACAGAATGAGGGGATCC
ATTGATCAGGTGGAAGCTGTTATACATTTTGAGGATGATACTGAAGAGCT
GCAACAATGGGATCAACAGATAGTTGGACTCTGTCAAGCTCTCAATGATA
TATTAGATAGCATGGCTAAGAAGGGATTGCCGATTCCTGTCTGA

protein sequence of CMJ_chr3_025160.2_cmj_v1

>CMJ_chr3_025160.2_cmj_v1 ID=CMJ_chr3_025160.2_cmj_v1; Name=CMJ_chr3_025160.2_cmj_v1; organism=Citrus maxima; type=polypeptide; length=398bp
MESALASASAITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVP
LVVSRQLLQTFAQELGRLEPETQKEIANYTLAQIQPRVVSFEEQVLIIRE
KLADLYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLED
DDAVNAEAFINKASFLVSSSQQEVLNLQYKVCYARILDLKRKFLEAALRY
YDISQIQKRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYK
DERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD
RAMIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGS
IDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV*

mRNA from alignment at chr3:40359847..40365133+

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

> ID=; Name=; organism= ; type=; length=5287bp; location=Sequence derived from: chr3:40359847..40365133+ (Citrus maxima
AGTTATGTTTGTAAGGAACATGACGACATGTCATACACAATTAGTAGTGC
TTCCGTGGCTCGTAAAAATAAGCCGAGACCATCCGGGAGCACCATACACA
AAGAGACAAGAGTGGAAGGTTGATTCACGGTGAGGTGCCTGAGGCTCTGA
CTCCCAGGGAGCGAAGGAGGCAAACGCTTCTCCTGATAATTCAGGGGATC
ACAATTTTGCATATAACATAAAAAAATTCAACCTAAAATCACAAACACTA
ATTTAACAATCATGGAAAGTGCATTAGCGAGCGCCTCTGCTATCACTGAC
CAGAGGCAAAAGATCGAACAGTATAAGCACATTCTCTCTTCTGTTATCTC
TTCAAACGACATCGTTCAAGCCAAGAAATTCATCGATCACAGTTACCTCT
CTCCCTCTCTATCTATCTTTTTAATTAAAAATTTTCGCCTAGGGTTTTTT
GAAATCCATTATTTTGGAAGGAAGCAAATTTTTGTTCGACCTTATCCTTT
TTCTATCTTTAAATTTTTTTTCTGTGCAGTGCTATCCGATGATGTACCAT
TGGTTGTTTCGCGTCAGCTGTTGCAGACTTTTGCTCAAGAGCTGGGGAGA
TTAGAACCGGAGACGCAAAAGGAAATTGCCAATTATACCCTCGCTCAGAT
TCAACCTCGTGTTGTCTCCTTCGAAGAACAGGTTAGCTTTGGACTATATT
TATATTCAAGCTATTGCTATCTGAGTACACTTTTTTCTTTTCTTTTGAAC
TTCTTGGATGCCACATTGTTTTTTTACTATAGGTCCATTTTCTGTTTGTA
ACTGGTTATTGCTGCTTGTTTGCTTTCCTCTTCATGCTTTCTTTATCTCT
CGAGTTTCTTTTATTTATTGTTTTTGTTGTGAGGGCTATATCTGATGCAT
TGGTGATCACATGGTTGACAACAACATCGAATTTTCATGATCATTGAAGT
TTAAGTGTTATAAGTAAAACTTGTTTTCTCAGGTGTTAATTATCAGGGAG
AAACTTGCTGATTTATATGAATCTGAGCAGCAATGGTCAAAAGCAGCTCA
GATGCTTAGTGGAATTGATCTTGACTCTGGAATGAGGTGTGGAACCGTAT
TCTTTAATTTTTAATAAAATTAGGTATTCTTGCCCATTATCACGATTATG
GATGTATTTCCTTTGTTTCATTTGCACCAGAGTCATTGACGATACATTCA
GGTTGTCGAAATGTGTCCAGATTGCTCGCCTATATCTTGAGGTATTGACT
GCATGATGCTACTGCATTTTAATGCTGAAAAAAATTCATCTTGTACATGT
CAACATGAAGGAGTCTTGTGATGGGGCAGAGTGTAGGCCTGGCCGAGCCG
CTAAAGTAGCTAAAGTGGTGATAAATCCCGTCAGTAAAATGGGTCCTATG
GAAAGTCCATCTATTCCCAATCGCCAGTCAAACTCAAAAAAAGTGATCCA
TTTATAATCCTCTCCCAGCTGGATTAATGGATCGTCCAATTGGAAATTAT
AACAGAATGCATAGGTCGTTAGAAGGAGTTCTAAGACACATATATATATA
TATTGTATATCCTCTAGTCACCTTATTTCCTCTATGAGGGAGAAAAAAAA
TTAAAGAACCCGCGGCTATCGGAAAAACTACAATTAGTGTTAACCAAGGA
AAATAATTCGTGGTAAAGACAAGATACACTTGGCCCAGAAAAACCCGTGC
TCGAATTGGAGACATTTCATTTTAAAGAGGATTGTGCTGCAGACTGGAGT
TTGTGTGTCTGATCAACAATCACTGCATGTTTTATTCATGTATTTTTCAT
TTATGGACATATACTCTACATTTGGTTTTAACCAATTCGAGGATCAGAGG
TTCATATAAATATGGAGGGTCTTAAAAATAGTTTTCATTAGCAACTGTAT
ATTTTGCAGGATGATGATGCTGTTAATGCAGAGGCTTTCATTAATAAAGC
GTCATTCTTGGTTAGCAGCAGTCAGCAGGAAGTGTTGAATCTACAGTACA
AGGTTCGATATTTGTTTGAGAGTGAGGATGTTTGTTTCCTCAGAAGCTTT
AGTATTTTCTGAACTCTATTTGGTGTTTCCTTTTCCTGTCATTAGGTTTG
TTATGCCAGGATTTTGGATTTGAAAAGGAAGTTCTTGGAAGCAGCACTAC
GTTACTATGATATATCTCAGATTCAGAAGCGGCAGATAGGAGACGAGTAT
GTGCTCTCGTAACATTTAGTTGTATTTTGTTTTTCAAGATTTAGATAATA
AACCTGGAATCATCCAATAATTATGAATATTTATCCTGAGTGTTCATGAT
TCTATCCTGTTTTCTAATTTAGTACTACTCTGGCCTGTCCTTTGGCCAAC
TGGTGTTTGCATAGGTTTTAGAATTCAGAGGCTGCTAAATGTTCTGTTTC
TTTTACATCATTGATTTATCTGTGACAGACTTGATATACACTAGCACCTT
CCCCTTGTGAATCTTATAAAATGAATTCTATTGTTTAGAACAATTGATGA
GGAAGCATTGGAGCAAGCTCTGTCTGCTGCTGTGACATGTACAATTTTGG
CTGCTGCGGGTCCTCAACGCTCTCGTGTTCTTGCCACTCTGTACAAAGTA
AACAATCATTGAAACAACACACATTTCAAGAATTTAATTTTCAATTTTTA
TTTTAAATTATGCTGATGTATTGGGATATGATTCAGGATGAACGGTGTTC
AAAATTGAAAATATATCCAATATTACAAAAGGTTCTCTCCATCTTTCTCT
CTGTCTGTGCATGTACAAATTCCATGAAGTTGTTTCTCATGCCTAACTAT
TTTGAAGAGTTTTTGCTCATATGATGCTGAAGTCGTTATATGGAATTTAT
CAGGTATATTTGGAGAGAATTTTGAGAAAACCTGAAATTGATGCATTCGC
AGAAGAGCTGAAACCTCATCAGGTTATAAACATTTGATGCTGCTTTCAAA
TGTCAAATCTATGGCTTGTACCTTTTTGTTTTATGTAAGCCGCATGGGCT
CACCTTTCACTTACTTTTCAGAAAGCACTTCTGCCAGATAATTTTACCGT
GCTGGATCGTGCCATGATTGAGCATAATCTTTTGAGCGCAAGCAAACTTT
ACACCAACATAAGTTTTGAAGAGTTGGGCACTTTGCTTGGTATTGCACCT
CAAAAGGTATTGTATCATATTGATTACCCTAGTTTTTCCCCTATTCTGCT
GATGGTCACCATGTTTTCATCGGACTGCTTGTCATTCGTGTCCATGGATC
TTTAGACTGACTGATATTTTATATTCCCAACATACTAGCTGCTTGGCAGT
TGCAGCAATGGTGAGGGGAGTGGGCAAGGGTTGGTTTTCCCTTACCCAAC
CTCTTCCATCCCAGGCATTCCTGGTTTTGAGCATTTTTTCCCCCCTTCCC
CTGAAAGGGTAATGAGCGTGTTGCTTTTCGAGTTCCTGTGCACATTTCCT
CTGTTGAAGTTGACCCCGCTTTTACTTCAATTATGGTTTTTGGTTATTTT
TGTCTTCTCTGTCTTTGGAAAGTATACTTATGTCCTTTCTATCTTAATGT
GTCACTGGTTTTCCTTTACAGGCAGAGAAGATTGCATCAAGAATGATTTT
TGAGGACAGAATGAGGGGATCCATTGATCAGGTATGACATACTAGCTAAA
AGTATTTTCCCAAGGCCAAAAGATTCATTGCTAACGTGAATTTGTAACTT
CATTTCCTGTTTATCACTCAAATTTATTATTGCTAGGTCATCTGGAGAGT
TGTAATTTGAAGTTTTTTCCAAAATATGTTAGAATCTTAAGACCTGTCTT
GTTTATTACTTTTTTGCTTTTAGATTCTGTTAGAGATTTAGGGCATGTTT
GGAACTGTCTACTTCTACTTAACTTTGAAAGCACAACAATAAAAGTGCTT
GGTAAATGCCATCTTTTTTTTTTGATGACATGAGATTATTGCTCAAATTA
CAACTCATATTACATGAGAGTATAACTGATATGTACAATCATATATATAT
ATTTGAGACTACATTAATGCTTTGATATGGCACCACTCTCCACGAATTCC
TCTCAAAATATTTTACATGTTGACATTAATGCTGATATGGCACCGCTCAG
ATTTGTAACCCTCTCAAATATTCGAGGGACGTCAAACTCCCAGCCTGAGA
GAAAGATTGTCTTCACTCAAGCACTGGAGCTTCAAGGAAGAACATTTAAA
TTAAACCCCTACAATGCGTCTGCGGAGGCTCGAACCACTTCTCTCACATT
TGTGAGGGAGTGGCTCTAGCCACTTGGGCTAAGCCCAAGTGGTTGGTAAA
TGCCATCTTTTACTTGGCAGCTAATGGTTACCATTCACCCACTTGCTTAT
TATCGTGGATTCAAAGCCACGCACCTCTGTTCTAAGCATAACCTTAGTTC
CAGCTTACTCTGGGCTGATCAATGTCATATGGTCTAGTGGATAAGTTAAG
TCAGTTAAATGCAAAATGCACAAATCACTAACACCCATCGAATAATTTAA
TATGTTAGGTGGAAGCTGTTATACATTTTGAGGATGATACTGAAGAGCTG
CAACAATGGGATCAACAGGTCAGTTTCTACCTGATAACAAGCACCAACTG
TTTCACAATTTATATGATTTGAACTGTGCATGGTTATAATTATCTTTTAG
TGGCTCTTAATTTGTAATACACCAACTGATTCACAATTTATATTATTTGA
ACTGTGCATGGTTATAGTTATCTTTTAGTGGCTCTTAATTTGTAACATTG
ATTTTGCAGATAGTTGGACTCTGTCAAGCTCTCAATGATATATTAGATAG
CATGGCTAAGAAGGGATTGCCGATTCCTGTCTGATCTATGCGATTGGCAA
TCTTTTTAGAAATTAAAGATTTGTTGATGCATAGAAACAATTCAGCATTT
TGTTTCGTTTTCAATTTTGTGAAGATCACTCATTTTGTAATTGGAATTTT
GCATGCCGTACTTTGACAGCAACGAGCATGGGGTATGTTTACATTCTCAG
TTCTAATAGTTTTTGCTTTGGCATTCTTTTGATACAAAAAATGGCTGAAG
AGTAACCTTTCCTTTTTCTTAGTTACAAAATCAAAGATTGGTGGATACGC
CTATCAGTTTCTGGATTGTAATTTGTTGGTGGATGCGCCTTTCAGTTTCT
CGATTGTAATTTGTTGGTGGATACGCCTTTCAGTTTCTCGATTGTAATTT
GCCAGGCTCTCCTGGTTTCATTGAGTCCTGCAAACTAAAATAATGTTAAG
CATGTTTATTGTGAACAAAAAGGGGAGGTAATCGAAA

Coding sequence (CDS) from alignment at chr3:40359847..40365133+

>CMJ_chr3_025160.2_cmj_v1 ID=CMJ_chr3_025160.2_cmj_v1; Name=CMJ_chr3_025160.2; organism=Citrus maxima; type=CDS; length=1194bp; location=Sequence derived from: chr3:40359847..40365133+ (Citrus maxima
ATGGAAAGTGCATTAGCGAGCGCCTCTGCTATCACTGACCAGAGGCAAAA
GATCGAACAGTATAAGCACATTCTCTCTTCTGTTATCTCTTCAAACGACA
TCGTTCAAGCCAAGAAATTCATCGATCACATGCTATCCGATGATGTACCA
TTGGTTGTTTCGCGTCAGCTGTTGCAGACTTTTGCTCAAGAGCTGGGGAG
ATTAGAACCGGAGACGCAAAAGGAAATTGCCAATTATACCCTCGCTCAGA
TTCAACCTCGTGTTGTCTCCTTCGAAGAACAGGTGTTAATTATCAGGGAG
AAACTTGCTGATTTATATGAATCTGAGCAGCAATGGTCAAAAGCAGCTCA
GATGCTTAGTGGAATTGATCTTGACTCTGGAATGAGAGTCATTGACGATA
CATTCAGGTTGTCGAAATGTGTCCAGATTGCTCGCCTATATCTTGAGGAT
GATGATGCTGTTAATGCAGAGGCTTTCATTAATAAAGCGTCATTCTTGGT
TAGCAGCAGTCAGCAGGAAGTGTTGAATCTACAGTACAAGGTTTGTTATG
CCAGGATTTTGGATTTGAAAAGGAAGTTCTTGGAAGCAGCACTACGTTAC
TATGATATATCTCAGATTCAGAAGCGGCAGATAGGAGACGAAACAATTGA
TGAGGAAGCATTGGAGCAAGCTCTGTCTGCTGCTGTGACATGTACAATTT
TGGCTGCTGCGGGTCCTCAACGCTCTCGTGTTCTTGCCACTCTGTACAAA
GATGAACGGTGTTCAAAATTGAAAATATATCCAATATTACAAAAGGTATA
TTTGGAGAGAATTTTGAGAAAACCTGAAATTGATGCATTCGCAGAAGAGC
TGAAACCTCATCAGAAAGCACTTCTGCCAGATAATTTTACCGTGCTGGAT
CGTGCCATGATTGAGCATAATCTTTTGAGCGCAAGCAAACTTTACACCAA
CATAAGTTTTGAAGAGTTGGGCACTTTGCTTGGTATTGCACCTCAAAAGG
CAGAGAAGATTGCATCAAGAATGATTTTTGAGGACAGAATGAGGGGATCC
ATTGATCAGGTGGAAGCTGTTATACATTTTGAGGATGATACTGAAGAGCT
GCAACAATGGGATCAACAGATAGTTGGACTCTGTCAAGCTCTCAATGATA
TATTAGATAGCATGGCTAAGAAGGGATTGCCGATTCCTGTCTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR036388	WH-like_DNA-bd_sf
IPR000717	PCI_dom
IPR040134	PSMD12/CSN4
IPR036390	WH_DNA-bd_sf