CMJ_chr3_025680.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_025680.1 vs. ExPASy TrEMBL
Match: V4TF33|V4TF33_CITCL (50S ribosomal protein L31, chloroplastic OS=Citrus clementina OX=85681 GN=CICLE_v10002669mg PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 4.724e-98 Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0 Query: 1 MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTRVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPPKRKSAASKGGKKK 139
MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTR VTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPPKRKSAA+KGGKKK
Sbjct: 35 MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTRAVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPPKRKSAAAKGGKKK 173
BLAST of CMJ_chr3_025680.1 vs. ExPASy TrEMBL
Match: A0A2H5NTD9|A0A2H5NTD9_CITUN (50S ribosomal protein L31 OS=Citrus unshiu OX=55188 GN=CUMW_071590 PE=3 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 5.087e-98 Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0 Query: 1 MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTRVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPPKRKSAASKGGKKK 139
MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTR VTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPPKRKSAA+KGGKKK
Sbjct: 1 MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTRAVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPPKRKSAAAKGGKKK 139
BLAST of CMJ_chr3_025680.1 vs. ExPASy TrEMBL
Match: A0A067HA15|A0A067HA15_CITSI (50S ribosomal protein L31 OS=Citrus sinensis OX=2711 GN=CISIN_1g032493mg PE=3 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 5.087e-98 Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0 Query: 1 MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTRVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPPKRKSAASKGGKKK 139
MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTR VTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPPKRKSAA+KGGKKK
Sbjct: 1 MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTRAVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPPKRKSAAAKGGKKK 139
BLAST of CMJ_chr3_025680.1 vs. ExPASy TrEMBL
Match: A0A5C7H5E4|A0A5C7H5E4_9ROSI (50S ribosomal protein L31 OS=Acer yangbiense OX=1000413 GN=EZV62_021360 PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 5.396e-77 Identity = 107/134 (79.85%), Postives = 121/134 (90.30%), Query Frame = 0 Query: 1 MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTRVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPPKRKSAASK 134
MA +LPNTF QIKPSAP+L T+ V NCAA + RTRVVTCRKKD+HP+FYEDAKVYCNGELVMTTGGT+KEYV+DVWSGNH FYLGGRSA+VVDADQVEKFR+KF GL ++MEIPVLKGEI+LPPKRKS A+K
Sbjct: 1 MALSLPNTFLQIKPSAPLLSTKNV-NCAAVSTKLRTRVVTCRKKDLHPEFYEDAKVYCNGELVMTTGGTKKEYVIDVWSGNHPFYLGGRSALVVDADQVEKFRKKFAGLEDLMEIPVLKGEIILPPKRKSGAAK 133
BLAST of CMJ_chr3_025680.1 vs. ExPASy TrEMBL
Match: A0A4U5QLQ4|A0A4U5QLQ4_POPAL (50S ribosomal protein L31, chloroplastic OS=Populus alba OX=43335 GN=D5086_0000087330 PE=4 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.387e-66 Identity = 100/140 (71.43%), Postives = 118/140 (84.29%), Query Frame = 0 Query: 1 MAQTLPNTFFQIKP-SAPILPTRKVKNCAATGSGYRTRVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPPKRKSAASKGGKKK 139
MA +L NTF Q KP S P+ P +KVK AA G + VTCRKKDIHP+FY+DAKVYCNGELV+TTGGT++EYVVDVWSGNH FYLG RS V+VDADQVEKFR+K+GGLS+IMEIPVLKGE++LP ++KS+A KGGKKK
Sbjct: 28 MALSLTNTFLQTKPISPPLPPIKKVKGSAAGNYGLQ---VTCRKKDIHPEFYQDAKVYCNGELVLTTGGTKQEYVVDVWSGNHPFYLGNRSGVLVDADQVEKFRKKYGGLSQIMEIPVLKGEVILPTRKKSSAGKGGKKK 164
BLAST of CMJ_chr3_025680.1 vs. ExPASy TrEMBL
Match: A0A7J7DL89|A0A7J7DL89_TRIWF (50S ribosomal protein L31 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW06G01313 PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 5.415e-66 Identity = 101/140 (72.14%), Postives = 113/140 (80.71%), Query Frame = 0 Query: 1 MAQTLPNTFFQIKPSAPI-LPTRKVKNCAATGSGYRTRVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPPKRKSAASKGGKKK 139
MA TLPN+F QIKPS+P LP RKV + A G + VTCRK+DIHPQF+EDAKVYCNGELVMTTGGTQKEYVVDVWSGNH FYLG RSA +VDADQV KFR++F GL E+MEIPVLKGEIVLP KR S + KG +K
Sbjct: 1 MALTLPNSFLQIKPSSPSSLPVRKVVSARAGNHGMQ---VTCRKRDIHPQFHEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHPFYLGSRSAQLVDADQVAKFRKRFAGLPELMEIPVLKGEIVLPSKRISISKKGASQK 137
BLAST of CMJ_chr3_025680.1 vs. ExPASy TrEMBL
Match: A0A0D2TST4|A0A0D2TST4_GOSRA (50S ribosomal protein L31 OS=Gossypium raimondii OX=29730 GN=B456_009G200300 PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 7.529e-66 Identity = 103/126 (81.75%), Postives = 109/126 (86.51%), Query Frame = 0 Query: 1 MAQTLPNTFFQIKPSAPI-LPTRKVKNCAATGSGYRTRVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLP 125
MA TLPNTF QIKPS P LP RKV A G GYR +V TCRKKDIHP+F+EDAKVYCNGELVMTTGGTQKEYVVDVWSGNH FYLG RSAV+VDADQVEKFR+KFG LSEIMEIPVLKGEI+LP
Sbjct: 1 MALTLPNTFLQIKPSPPASLPPRKV--VTARGGGYRPQV-TCRKKDIHPEFHEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHPFYLGNRSAVLVDADQVEKFRKKFGQLSEIMEIPVLKGEIILP 123
BLAST of CMJ_chr3_025680.1 vs. ExPASy TrEMBL
Match: A0A6M2EPS2|A0A6M2EPS2_9ROSI (50S ribosomal protein L31 OS=Populus davidiana OX=266767 PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 9.068e-66 Identity = 99/140 (70.71%), Postives = 117/140 (83.57%), Query Frame = 0 Query: 1 MAQTLPNTFFQIKP-SAPILPTRKVKNCAATGSGYRTRVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPPKRKSAASKGGKKK 139
MA +L N F Q KP S P+ P +KVK AA G + VTCRKKDIHP+FY+DAKVYCNGELV+TTGGT++EYVVDVWSGNH FYLG RS V+VDADQVEKFR+K+GGLS+IMEIPVLKGE++LP ++KS+A KGGKKK
Sbjct: 1 MALSLTNNFLQTKPISPPLPPIKKVKGSAAGNYGLQ---VTCRKKDIHPEFYQDAKVYCNGELVLTTGGTKQEYVVDVWSGNHPFYLGNRSGVLVDADQVEKFRKKYGGLSQIMEIPVLKGEVILPTRKKSSAGKGGKKK 137
BLAST of CMJ_chr3_025680.1 vs. ExPASy TrEMBL
Match: A0A6A6NHK8|A0A6A6NHK8_HEVBR (50S ribosomal protein L31 OS=Hevea brasiliensis OX=3981 GN=GH714_015574 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 2.110e-65 Identity = 105/140 (75.00%), Postives = 114/140 (81.43%), Query Frame = 0 Query: 1 MAQTLPNTFFQIKP-SAPILPTRKVKNCAATGSGYRTRVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPPKRKSAASKGGKKK 139
MA L ++ QIKP S P++P RKVK A S + VTCRKKDIHPQFYEDAKVYCNGELVMTTGGT+KEYVVDVWSGNH FYLG RSAVVVDADQVEKFR+KFG LS+IMEIPVLKGEIVLP +RKSA GKKK
Sbjct: 1 MALNLTSSVLQIKPLSPPLVPIRKVKVSAVGNSALQ---VTCRKKDIHPQFYEDAKVYCNGELVMTTGGTRKEYVVDVWSGNHPFYLGNRSAVVVDADQVEKFRKKFGELSQIMEIPVLKGEIVLPSRRKSAGK--GKKK 135
BLAST of CMJ_chr3_025680.1 vs. ExPASy TrEMBL
Match: A0A6A2WWY7|A0A6A2WWY7_HIBSY (50S ribosomal protein L31 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116962pilonHSYRG01293 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.782e-64 Identity = 101/127 (79.53%), Postives = 106/127 (83.46%), Query Frame = 0 Query: 1 MAQTLPNTFFQIKPSAPILPTR--KVKNCAATGSGYRTRVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLP 125
MA LPNTF QIKPS LPT K ATG GYR ++ TCRKKDIHP+FYEDAKVYCNGELV TTGGTQKEYVVDVWSGNH FYLG RSAV+VDADQVEKFR+KF GLSEIMEIPVLKGEIVLP
Sbjct: 1 MALNLPNTFLQIKPS---LPTSFATTKTVTATGGGYRPQI-TCRKKDIHPEFYEDAKVYCNGELVSTTGGTQKEYVVDVWSGNHPFYLGNRSAVLVDADQVEKFRKKFEGLSEIMEIPVLKGEIVLP 123
BLAST of CMJ_chr3_025680.1 vs. ExPASy Swiss-Prot
Match: RK31_ARATH (50S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL31 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 8.554e-61 Identity = 88/132 (66.67%), Postives = 102/132 (77.27%), Query Frame = 0 Query: 1 MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTR-------VVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLP 125
MA +LPN+F QI P P L RK A G R +TCRKK++HP+F+EDAKVYCNGELVMTTGGT+KEYVVDVWSGNH FYLG RSA++VDADQVEKFR++F GLSEIMEIPVLKGEI++P
Sbjct: 1 MAVSLPNSFLQISPCVPSLQLRKPVMAAVKGGKQSVRRSSNTVVQITCRKKELHPEFHEDAKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSEIMEIPVLKGEIIMP 132
BLAST of CMJ_chr3_025680.1 vs. ExPASy Swiss-Prot
Match: RK31_SPIOL (50S ribosomal protein L31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL31 PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.010e-52 Identity = 79/126 (62.70%), Postives = 92/126 (73.02%), Query Frame = 0 Query: 1 MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTRVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLPP 126
M TL N F P+ P K T S +CRK DIHP+F EDAKVYCNGELVMTTGGTQK+Y V+VWSGNH FYLG RSA+++DADQVEKFR+K+G L++IMEIPVLKGEI+LPP
Sbjct: 1 MVLTLSNQFLAKIPATP-----KTLTLPKTSSSTLRPQWSCRKSDIHPEFREDAKVYCNGELVMTTGGTQKDYTVEVWSGNHPFYLGNRSALLLDADQVEKFRKKYGELTQIMEIPVLKGEIILPP 121
BLAST of CMJ_chr3_025680.1 vs. ExPASy Swiss-Prot
Match: RL31_SYNP6 (50S ribosomal protein L31 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rpmE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.283e-20 Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0 Query: 43 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLS 110
K DIHPQ+Y +AKVYCNGE VMT G TQ E VDVWSGNH FY G + + + +VE+F +K+G L
Sbjct: 3 KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQKIIDTEG-RVERFLRKYGMLE 69
BLAST of CMJ_chr3_025680.1 vs. ExPASy Swiss-Prot
Match: RL31_SYNE7 (50S ribosomal protein L31 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpmE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.283e-20 Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0 Query: 43 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLS 110
K DIHPQ+Y +AKVYCNGE VMT G TQ E VDVWSGNH FY G + + + +VE+F +K+G L
Sbjct: 3 KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQKIIDTEG-RVERFLRKYGMLE 69
BLAST of CMJ_chr3_025680.1 vs. ExPASy Swiss-Prot
Match: RL31_THEEB (50S ribosomal protein L31 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=rpmE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.563e-20 Identity = 36/67 (53.73%), Postives = 52/67 (77.61%), Query Frame = 0 Query: 43 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDAD-QVEKFRQKFGG 108
K +IHPQ+Y +AKVYC+GE++MT G T+ E VD+WSGNH F+ G + +VDA+ +VE+FR+K+ G
Sbjct: 3 KPNIHPQWYPEAKVYCDGEVIMTVGSTKPELHVDIWSGNHPFFTG--TQKIVDAEGRVERFRRKYSG 67
BLAST of CMJ_chr3_025680.1 vs. ExPASy Swiss-Prot
Match: RL31_PROMA (50S ribosomal protein L31 OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) OX=167539 GN=rpmE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.998e-20 Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 0 Query: 43 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 107
KKDIHP +Y DAKV CNGE+VMTTG TQ E VDVWSGNH F+ G + + + +V++F +K+G
Sbjct: 3 KKDIHPNWYPDAKVICNGEVVMTTGSTQPEIHVDVWSGNHPFFTGTQKILDTEG-RVDRFMRKYG 66
BLAST of CMJ_chr3_025680.1 vs. ExPASy Swiss-Prot
Match: RL31_NOSP7 (50S ribosomal protein L31 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=rpmE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-19 Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 0 Query: 43 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 107
K DIHP++Y DAKVYCNG++VMT G T+ E VDVWSGNH FY G + + + +VE+F +K+G
Sbjct: 3 KADIHPKWYPDAKVYCNGQVVMTIGSTKPELHVDVWSGNHPFYTGTQKIIDTEG-RVERFLRKYG 66
BLAST of CMJ_chr3_025680.1 vs. ExPASy Swiss-Prot
Match: RL31_PROM4 (50S ribosomal protein L31 OS=Prochlorococcus marinus (strain MIT 9211) OX=93059 GN=rpmE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.595e-19 Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 0 Query: 43 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 107
K+DIHP +Y DAKV CNGE+VMTTG TQ E VDVWSGNH F+ G + + + +V++F +K+G
Sbjct: 3 KEDIHPTWYPDAKVICNGEVVMTTGSTQPEIHVDVWSGNHPFFTGTQKILDTEG-RVDRFMRKYG 66
BLAST of CMJ_chr3_025680.1 vs. ExPASy Swiss-Prot
Match: RL31_SYNP2 (50S ribosomal protein L31 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=rpmE PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.850e-19 Identity = 36/68 (52.94%), Postives = 49/68 (72.06%), Query Frame = 0 Query: 43 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLS 110
K DIHP++Y DAKV CNGE+VMT G TQ E V++WSGNH FY G + + + +V++F +K+G LS
Sbjct: 3 KADIHPEWYPDAKVICNGEVVMTIGSTQPEINVEIWSGNHPFYTGTQKIIDTEG-RVDRFLRKYGMLS 69
BLAST of CMJ_chr3_025680.1 vs. ExPASy Swiss-Prot
Match: RL31_PROMM (50S ribosomal protein L31 OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=rpmE PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.912e-19 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 0 Query: 43 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 107
K DIHP +Y DAKV CNGE+VMTTG TQ E VDVWSGNH F+ G + + + +V++F +K+G
Sbjct: 3 KPDIHPNWYPDAKVICNGEVVMTTGSTQPELHVDVWSGNHPFFTGTQKILDTEG-RVDRFMRKYG 66
BLAST of CMJ_chr3_025680.1 vs. Araport11
Match: AT1G75350.1 (| Ribosomal protein L31 | Chr1:28272163-28272687 FORWARD LENGTH=144 | 201606) HSP 1 Score: 186.808 bits (473), Expect = 8.752e-62 Identity = 88/132 (66.67%), Postives = 102/132 (77.27%), Query Frame = 0 Query: 1 MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTR-------VVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLP 125
MA +LPN+F QI P P L RK A G R +TCRKK++HP+F+EDAKVYCNGELVMTTGGT+KEYVVDVWSGNH FYLG RSA++VDADQVEKFR++F GLSEIMEIPVLKGEI++P
Sbjct: 1 MAVSLPNSFLQISPCVPSLQLRKPVMAAVKGGKQSVRRSSNTVVQITCRKKELHPEFHEDAKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSEIMEIPVLKGEIIMP 132 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_025680.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_025680.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_025680.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 1 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_025680.1_cmj_v1 ID=CMJ_chr3_025680.1_cmj_v1; Name=CMJ_chr3_025680.1; organism=Citrus maxima; type=mRNA; length=420bpback to top protein sequence of CMJ_chr3_025680.1_cmj_v1 >CMJ_chr3_025680.1_cmj_v1 ID=CMJ_chr3_025680.1_cmj_v1; Name=CMJ_chr3_025680.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=140bpback to top mRNA from alignment at chr3:40661328..40663439+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2112bp; location=Sequence derived from: chr3:40661328..40663439+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:40661328..40663439+ >CMJ_chr3_025680.1_cmj_v1 ID=CMJ_chr3_025680.1_cmj_v1; Name=CMJ_chr3_025680.1; organism=Citrus maxima; type=CDS; length=420bp; location=Sequence derived from: chr3:40661328..40663439+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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