CMJ_chr3_027500.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of CMJ_chr3_027500.1 vs. ExPASy TrEMBL
Match: V4T5Q1|V4T5Q1_CITCL (tRNA pseudouridine(55) synthase OS=Citrus clementina OX=85681 GN=CICLE_v10000742mg PE=3 SV=1) HSP 1 Score: 1125.15 bits (2909), Expect = 0.000e+0 Identity = 544/557 (97.67%), Postives = 551/557 (98.92%), Query Frame = 0 Query: 1 MANETEDAPTNNASESHATSADVERIPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYRDDKERVMENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPIILENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCFLTE 557 MANETEDAPTN+ASESHATSADVER PTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTY DKERV+ENESACDFA+AIAELVKKEGHQIDSFSLEVSMPP ILENENKLSLYVKRKYRSEAWFK+RSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYS VEASI+IQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVST EVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGE+SIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKN+KIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCFLTE Sbjct: 1 MANETEDAPTNSASESHATSADVERNPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYCGDKERVVENESACDFAVAIAELVKKEGHQIDSFSLEVSMPPTILENENKLSLYVKRKYRSEAWFKDRSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSRVEASIRIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTTEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGEASIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNLKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCFLTE 557
BLAST of CMJ_chr3_027500.1 vs. ExPASy TrEMBL
Match: A0A067H258|A0A067H258_CITSI (tRNA pseudouridine(55) synthase OS=Citrus sinensis OX=2711 GN=CISIN_1g008562mg PE=3 SV=1) HSP 1 Score: 1125.15 bits (2909), Expect = 0.000e+0 Identity = 544/557 (97.67%), Postives = 551/557 (98.92%), Query Frame = 0 Query: 1 MANETEDAPTNNASESHATSADVERIPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYRDDKERVMENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPIILENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCFLTE 557 MANETEDAPTN+ASESHATSADVER PTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTY DKERV+ENESACDFA+AIAELVKKEGHQIDSFSLEVSMPP ILENENKLSLYVKRKYRSEAWFK+RSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYS VEASI+IQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVST EVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGE+SIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKN+KIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCFLTE Sbjct: 1 MANETEDAPTNSASESHATSADVERNPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYCGDKERVVENESACDFAVAIAELVKKEGHQIDSFSLEVSMPPTILENENKLSLYVKRKYRSEAWFKDRSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSRVEASIRIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTTEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGEASIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNLKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCFLTE 557
BLAST of CMJ_chr3_027500.1 vs. ExPASy TrEMBL
Match: A0A067HBC2|A0A067HBC2_CITSI (tRNA pseudouridine(55) synthase OS=Citrus sinensis OX=2711 GN=CISIN_1g008562mg PE=3 SV=1) HSP 1 Score: 1118.61 bits (2892), Expect = 0.000e+0 Identity = 544/561 (96.97%), Postives = 551/561 (98.22%), Query Frame = 0 Query: 1 MANETEDAPTNNASESHATSADVERIPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYRDDKERVMENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPIILENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKET----QILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCFLTE 557 MANETEDAPTN+ASESHATSADVER PTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTY DKERV+ENESACDFA+AIAELVKKEGHQIDSFSLEVSMPP ILENENKLSLYVKRKYRSEAWFK+RSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYS VEASI+IQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVST EVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGE+SIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKN+KIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKET QILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCFLTE Sbjct: 1 MANETEDAPTNSASESHATSADVERNPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYCGDKERVVENESACDFAVAIAELVKKEGHQIDSFSLEVSMPPTILENENKLSLYVKRKYRSEAWFKDRSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSRVEASIRIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTTEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGEASIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNLKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETVRCYQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCFLTE 561
BLAST of CMJ_chr3_027500.1 vs. ExPASy TrEMBL
Match: A0A2H5P9Z8|A0A2H5P9Z8_CITUN (tRNA pseudouridine(55) synthase OS=Citrus unshiu OX=55188 GN=CUMW_117330 PE=3 SV=1) HSP 1 Score: 1048.11 bits (2709), Expect = 0.000e+0 Identity = 514/548 (93.80%), Postives = 519/548 (94.71%), Query Frame = 0 Query: 1 MANETEDAPTNNASESHATSADVERIPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYRDDKERVMENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPIILENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTD 548 MANETEDAPTN+ASESHATSADVER PTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTY DKERV+ENESACDFAIAIAELVKKEGHQIDSFSLEVSMPP ILENENKLSLYVKRKYRSEAWFK+RSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTY +AKNCLDTVKDKSAITGVENSVVST EVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGE+SIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTD Sbjct: 1 MANETEDAPTNSASESHATSADVERNPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYCGDKERVVENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPTILENENKLSLYVKRKYRSEAWFKDRSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTY------------------------NAKNCLDTVKDKSAITGVENSVVSTTEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGEASIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTD 524
BLAST of CMJ_chr3_027500.1 vs. ExPASy TrEMBL
Match: V4TFN4|V4TFN4_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10000742mg PE=4 SV=1) HSP 1 Score: 932.554 bits (2409), Expect = 0.000e+0 Identity = 453/466 (97.21%), Postives = 460/466 (98.71%), Query Frame = 0 Query: 1 MANETEDAPTNNASESHATSADVERIPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYRDDKERVMENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPIILENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKET 466 MANETEDAPTN+ASESHATSADVER PTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTY DKERV+ENESACDFA+AIAELVKKEGHQIDSFSLEVSMPP ILENENKLSLYVKRKYRSEAWFK+RSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYS VEASI+IQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVST EVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGE+SIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKN+KIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKET Sbjct: 1 MANETEDAPTNSASESHATSADVERNPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYCGDKERVVENESACDFAVAIAELVKKEGHQIDSFSLEVSMPPTILENENKLSLYVKRKYRSEAWFKDRSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSRVEASIRIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTTEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGEASIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNLKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKET 466
BLAST of CMJ_chr3_027500.1 vs. ExPASy TrEMBL
Match: A0A2H5P9Z7|A0A2H5P9Z7_CITUN (tRNA pseudouridine(55) synthase OS=Citrus unshiu OX=55188 GN=CUMW_117320 PE=3 SV=1) HSP 1 Score: 874.774 bits (2259), Expect = 0.000e+0 Identity = 432/466 (92.70%), Postives = 437/466 (93.78%), Query Frame = 0 Query: 1 MANETEDAPTNNASESHATSADVERIPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYRDDKERVMENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPIILENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKET 466 MANETEDAPTN+ASESHATSADVER PTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTY DKERV+ENESACDFAIAIAELVKKEGHQIDSFSLEVSMPP ILENENKLSLYVKRKYRSEAWFK+RSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTY +AKNCLDTVKDKSAITGVENSVVST EVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGE+SIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKET Sbjct: 1 MANETEDAPTNSASESHATSADVERNPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYCGDKERVVENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPTILENENKLSLYVKRKYRSEAWFKDRSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTY------------------------NAKNCLDTVKDKSAITGVENSVVSTTEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGEASIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKET 442 HSP 2 Score: 171.014 bits (432), Expect = 6.738e-42 Identity = 82/94 (87.23%), Postives = 85/94 (90.43%), Query Frame = 0 Query: 466 TQILQKTPIRVLHRRSPLEREKIINW---------MKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVK 550 +QILQKTPIRVLHRRSPLEREKIINW MKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTD++ Sbjct: 594 SQILQKTPIRVLHRRSPLEREKIINWFESLQLPIMMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDIR 687
BLAST of CMJ_chr3_027500.1 vs. ExPASy TrEMBL
Match: A0A2H5PAS6|A0A2H5PAS6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_117330 PE=4 SV=1) HSP 1 Score: 874.389 bits (2258), Expect = 0.000e+0 Identity = 432/466 (92.70%), Postives = 437/466 (93.78%), Query Frame = 0 Query: 1 MANETEDAPTNNASESHATSADVERIPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYRDDKERVMENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPIILENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKET 466 MANETEDAPTN+ASESHATSADVER PTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTY DKERV+ENESACDFAIAIAELVKKEGHQIDSFSLEVSMPP ILENENKLSLYVKRKYRSEAWFK+RSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTY +AKNCLDTVKDKSAITGVENSVVST EVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGE+SIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKET Sbjct: 1 MANETEDAPTNSASESHATSADVERNPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYCGDKERVVENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPTILENENKLSLYVKRKYRSEAWFKDRSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTY------------------------NAKNCLDTVKDKSAITGVENSVVSTTEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGEASIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKET 442 HSP 2 Score: 91.2781 bits (225), Expect = 1.638e-15 Identity = 45/55 (81.82%), Postives = 46/55 (83.64%), Query Frame = 0 Query: 466 TQILQKTPIRVLHRRSPLEREKIINW---------MKIEKIAGSSQYFLLHMCTQ 511 +QILQKTPIRVLHRRSPLEREKIINW MKIEKIAGSSQYFLLHMCTQ Sbjct: 594 SQILQKTPIRVLHRRSPLEREKIINWFESLQLPIMMKIEKIAGSSQYFLLHMCTQ 648
BLAST of CMJ_chr3_027500.1 vs. ExPASy TrEMBL
Match: A0A5C7H6Y0|A0A5C7H6Y0_9ROSI (tRNA pseudouridine(55) synthase OS=Acer yangbiense OX=1000413 GN=EZV62_021135 PE=3 SV=1) HSP 1 Score: 757.673 bits (1955), Expect = 0.000e+0 Identity = 382/563 (67.85%), Postives = 447/563 (79.40%), Query Frame = 0 Query: 1 MANETED----APTNNASESHATSADVE-RIPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYRDDKERVMENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPIILENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPLETLLDVK-CGISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCFLTE 557 M+N TED + A +H S DV+ +I ++D+ LN+AV+ P DAVKDL SKEVC+RCIFRLFG+QVP S LS ++L + LGEQ D + + EP C CLG+LQF Y +DKER ++ ESA D A+ IA+LVKKEG+QIDSF LEVS+PPII ENEN LYVK KY SE WF+ERS+S K+ALK AL NPLETLL + +S+F IRLTY+H +A+ +QNFVE+ E C +N LD+VKD S VST E + ++SS+GL DN SE + PL+KVNEPCRLECL RTPIYFGGRYLKYSRNVSQTRWIID+ERMGE+SIEEII GNILPMCRGD+YKFHAAGREDIDVRMLGSGRPFL EIQNA +VPSEL VKEIE+KIN+LEN+L+RVKN+K+VGS+GWTLMREGE+EKQKQY ALVWISRPLQDED Q+ISS+KE QILQ+TPIRVLHRRSPL+REKII+W+ IEKIAGSSQYFLLH+CTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVT+VKM+CFL E Sbjct: 1 MSNGTEDVAQVSSVQAAEAAHVISTDVDLQIAGEDDEEMTPLNNAVRSFPFDAVKDLSSKEVCMRCIFRLFGVQVPDFS-LSQPAILRNFLGEQTDSIKQLEDTEPKSCSICLGVLQFAYCNDKERSVKKESANDLAVTIADLVKKEGYQIDSFLLEVSLPPIISENENMAWLYVKNKYGSELWFQERSLSNRIYAKEALKSALANPLETLLFCRMSSVSSFRIRLTYTHAKATKTVQNFVERNESC------TENGLDSVKDGS---------VSTSEANTITQRSSDGLLDNNSSEVYGLPLEKVNEPCRLECLFNRTPIYFGGRYLKYSRNVSQTRWIIDDERMGEASIEEIIAGNILPMCRGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNACQVPSELFVKEIETKINNLENRLIRVKNLKVVGSEGWTLMREGESEKQKQYTALVWISRPLQDEDLQSISSIKEMQILQRTPIRVLHRRSPLDREKIIHWINIEKIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTEVKMDCFLDE 547
BLAST of CMJ_chr3_027500.1 vs. ExPASy TrEMBL
Match: A0A6J1AB15|A0A6J1AB15_9ROSI (tRNA pseudouridine(55) synthase OS=Herrania umbratica OX=108875 GN=LOC110416641 PE=3 SV=1) HSP 1 Score: 734.561 bits (1895), Expect = 0.000e+0 Identity = 374/560 (66.79%), Postives = 438/560 (78.21%), Query Frame = 0 Query: 1 MANETEDAPTNNA-SESHATSADVERIPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQVPI-CSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYRDD-KERVMENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPIILENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCFLTE 557 M+N TE ++A +ESHA + D E +LL AV+ LP VKDLLS VC RC+ RLFG+ I C SL +S+L +L E+ S VE C CLGILQF+Y DD +E V++ ESA D A++IAELVK+EGHQID FSLEVS+PP+I+ENE+ L +K+KY SE WF+ER +S+C S KD LKFA+T PLETLLDVK S+F IRLTY+H AS K+QN VE+ + CKR+K A+N L VKD+ AI + S ST+E V SSNGLQD E SE E P++KV+EPC L LC RT IY GRYLKYSRNVSQTRWIIDEERMGE+S+EEIIG NILP+CRGD+Y+FHAAGREDIDVRMLGSGRPFL EIQNAR+VPSEL+VKE+ESKIN LENKLV VKN+K+VGSQGW LMREGEAEKQKQY ALVWISRPL+DED Q+IS L + +ILQ+TPIRVLHRRSPLEREKII+WMKIE+IAGS QYFLLH+CTQAGTYIKEFVHGDLGRT PS+GSILGCRAEILQLDVTDVKM+CF+TE Sbjct: 1 MSNGTEPVQASSAVAESHAGACDAEM---------QLLEGAVRSLPYHVVKDLLSVGVCARCVLRLFGIGEHIYCDSLFSQSMLRSILEEETSFK---SEVEFQFCNICLGILQFSYCDDGEETVVKKESAKDMALSIAELVKQEGHQIDGFSLEVSVPPLIMENESSLLSDMKKKYESEPWFQERLLSKCHSVKDVLKFAITKPLETLLDVKASASSFRIRLTYTHNRASKKVQNSVERNQECKRQKTGAENGLHNVKDELAIADKDCSGYSTVETNAVTGISSNGLQDQETSEHFESPIEKVSEPCHLVYLCSRTHIYLCGRYLKYSRNVSQTRWIIDEERMGEASVEEIIGSNILPICRGDNYRFHAAGREDIDVRMLGSGRPFLLEIQNARQVPSELIVKEMESKINGLENKLVGVKNLKVVGSQGWALMREGEAEKQKQYCALVWISRPLEDEDMQSISLLNDMKILQRTPIRVLHRRSPLEREKIIHWMKIERIAGSCQYFLLHLCTQAGTYIKEFVHGDLGRTQPSVGSILGCRAEILQLDVTDVKMDCFVTE 548
BLAST of CMJ_chr3_027500.1 vs. ExPASy TrEMBL
Match: A0A5B7BN46|A0A5B7BN46_DAVIN (tRNA pseudouridine(55) synthase OS=Davidia involucrata OX=16924 GN=Din_038702 PE=3 SV=1) HSP 1 Score: 730.709 bits (1885), Expect = 0.000e+0 Identity = 374/583 (64.15%), Postives = 448/583 (76.84%), Query Frame = 0 Query: 1 MANETEDAP--TNNASESHATSADVERIPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLRCIFRLFGMQ--VPICSSLSVKSLLCHVLGEQADLHQNI-------------------SSVEPNICRSCLGILQFTYRDDKERVMENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPIILENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLK---KVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMNCFLTE 557 MANETE A N E H SA + + KLL+DAV+ LP A+KDLLS VC+RCIFRLFG+ + C SLS S+L VLG+ L +++ S +EP C CLGILQF Y +DKE ++ + A DFA++IAE+VK+E +QID+FSLEVS+P I+ENE + LY+KRKY SE WF+E+ +SE S KD LK ++TNPLE+LLDVK G+ST HIRLTY+H E S K Q+F+E + KRRK AK+ LDT+ ++ G+E+S ST E V E+SSNGLQD H+FP + ++PCRL LC+RTPIY GGRYLKYSRNVSQTRWIID+ERMGE+S+EEIIG NILPMC+GD+YKFHAAGREDIDVRMLGSGRPFL EIQNAR VPSE+ +KE+E KINSLENKLVRVKN+K++G+QGWTLMREGEAEKQKQYAALVWISR L+D+D QTISS K+ QILQ+TP+RVLHRRSPLEREKII+WMKIE+IAGSSQYFLLH+CTQAGTYIKEFVHGDLGRT+PSIGSILGCRAEILQLDVTDVKM+CFLT+ Sbjct: 1 MANETEAAAQVINGQEEGHVISAAGDDV--------KLLSDAVRTLPPHAMKDLLSIGVCIRCIFRLFGVHECIYYCISLS-PSVLHAVLGKLTGLEEDMVHNSFRANEDSSGQRSSQDSEMEPKFCGICLGILQFAYCNDKEMLVREDCANDFAVSIAEVVKQEDYQIDNFSLEVSVPQSIVENEQAVWLYMKRKYDSEPWFQEKFLSERISAKDVLKLSITNPLESLLDVKSGLSTLHIRLTYTHSEESTKGQHFIENSKSNKRRKTGAKDDLDTIG--GSVAGIEHSDFSTSEEY-VSERSSNGLQD------HDFPNGFQLEASQPCRLTLLCYRTPIYIGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGSNILPMCQGDNYKFHAAGREDIDVRMLGSGRPFLVEIQNARHVPSEVFIKEMEGKINSLENKLVRVKNLKVLGNQGWTLMREGEAEKQKQYAALVWISRSLKDDDLQTISSFKDMQILQRTPVRVLHRRSPLEREKIIHWMKIERIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTDVKMDCFLTD 565
BLAST of CMJ_chr3_027500.1 vs. ExPASy Swiss-Prot
Match: PUS10_HUMAN (tRNA pseudouridine synthase Pus10 OS=Homo sapiens OX=9606 GN=PUS10 PE=1 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 3.347e-76 Identity = 160/456 (35.09%), Postives = 252/456 (55.26%), Query Frame = 0 Query: 102 NICRSCLGILQ-FTYRDDKERVMENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPIILENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPL--ETLLDVKCGISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCR-LECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVP-SELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMN 552 N+C CLGILQ F +D F + + V+ G + S VS PP + E+ L VK++ ++ R + K+A K+ +T+PL E L G S F + + ++H E +E C +C K+K SV + + V+ K+ N +++ + + P C LE C ++ GRY KYSRN+ QT WIID ER ESS+EE+I ++L + + +S+ F ++GRED+DVR LG+GRPF E+ N V + +KE++ KIN+ NK ++V+++++V + M+EGE EK K Y+AL+W ++ +Q +D + ++ +K+ +I QKTP+RVLHRR R ++I++M+ + + +F LH+ TQAGTYIKEFVHGD GRT P+IGS++ A+IL+LDV V ++ Sbjct: 107 NVCNVCLGILQEFCEKD-------------FIKKVCQKVEASGFEFTSLVFSVSFPPQLSVREHAAWLLVKQEMGKQSLSLGRD--DIVQLKEAYKW-ITHPLFSEELGVPIDGKSLFEVSVVFAHPET----------VEDCHFLAAICPDCFKPAKNK-------QSVFTRMAVM----KALNKIKEEDFLKQFPCPPNSPKAVCAVLEIECAHGAVFVAGRYNKYSRNLPQTPWIIDGERKLESSVEELISDHLLAVFKAESFNFSSSGREDVDVRTLGNGRPFAIELVNPHRVHFTSQEIKELQQKINNSSNK-IQVRDLQLVTREAIGHMKEGEEEKTKTYSALIWTNKAIQKKDIEFLNDIKDLKIDQKTPLRVLHRRPLAVRARVIHFMETQYV--DEHHFRLHLKTQAGTYIKEFVHGDFGRTKPNIGSLMNVTADILELDVESVDVD 522
BLAST of CMJ_chr3_027500.1 vs. ExPASy Swiss-Prot
Match: PUS10_MOUSE (tRNA pseudouridine synthase Pus10 OS=Mus musculus OX=10090 GN=Pus10 PE=1 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 8.773e-72 Identity = 159/456 (34.87%), Postives = 245/456 (53.73%), Query Frame = 0 Query: 103 ICRSCLGILQFTYRDDKERVMENESACD--FAIAIAELVKKEGHQIDSFSLEVSMPPIILENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPL--ETLLDVKCGISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCR-LECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVP-SELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMN 552 +C CLGILQ C+ F + + V+ G + S L VS PP + E+ L VK++ ++ R+ + K+A K+ +T+PL E L G S F + + ++H E + E C ++C K+K SV + + V+ K+ + +++ + P C LE C ++ GRY KYSRN+ QT WIID ER ESS+EE+I ++L + R +S+ F ++GRED+DVR LG+GRPF E+ N V + +KE++ IN +K ++V+++++V + M+EGE EK K Y+AL+W +R +Q +D + LK+ +I QKTP+RVLHRR R + I+ MK + +F LH+ TQAGTYIKEFVHGD GRT P++GS++ A+IL+LDV V ++ Sbjct: 106 VCNVCLGILQ--------------EFCEKGFITKVCQKVEASGFEFTSVVLSVSFPPQLSVREHAAWLLVKQEMGKQSLSLGRN--DVVQLKEAYKW-ITHPLFSEELGVPTDGKSLFEVSVVFAHPETA----------EDCHFLGEVCRDCFKPAKNK-------QSVFTRMAVL----KALSKIKEEDFLGQFPCPPNSPKTVCTVLEVECTHGAVFVAGRYNKYSRNLPQTPWIIDGERKMESSVEELISDHLLAVFRAESFNFSSSGREDVDVRTLGNGRPFAVELLNPHRVHFTSQEMKELQQTINKSSDK-IQVRDLQLVTREAIGHMKEGEEEKTKTYSALIWTNRAIQKKDIGFLDDLKDLKIDQKTPLRVLHRRPLAVRTRAIHSMKTHYL--DEHHFRLHLKTQAGTYIKEFVHGDFGRTKPNLGSLMNVTADILELDVESVDVD 520
BLAST of CMJ_chr3_027500.1 vs. ExPASy Swiss-Prot
Match: PUS10_XENLA (tRNA pseudouridine synthase Pus10 OS=Xenopus laevis OX=8355 GN=pus10 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 8.971e-65 Identity = 152/453 (33.55%), Postives = 239/453 (52.76%), Query Frame = 0 Query: 103 ICRSCLGILQFTYRDDKERVMENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPIILENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPLETLLDVKC-GISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRL-ECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVP-SELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMN 552 IC CLGILQ + E E + I V +++ F L +S+P + E+ L K++ +++ + K+A K+ + L L ++ S F + + ++H E C ++C K+K SV + + V+ EK +++ + FP C + + C +P++ GRY KYSRN+ QT WIID ER ESS+EE+I +++ R S+ F ++GRED+DVR LG GRPF E+ N +V + +K ++ KIN+ + ++V++++IV + M+EGE EK K Y AL+WI + +++ED Q + L+E I QKTP+RVLHRR R + I+ M+ E + +F L++ TQAGTYIKEFVHGD GRT P++GSI+ A+IL+LDV V ++ Sbjct: 95 ICPLCLGILQ--------QFCEPEFIEKVFVKINSAV----YELKDFVLSISLPAQLSVREHSAWLQAKQEMGKHGHSLDKT--DIVQLKEAYKWIIHPLLSDQLGIQADSKSLFEVAVVFTHPETD----------GDCHFLATVCRDCFKPTKNK-------QSVFTRMAVVKALEK----IKEEDFRVQFPFPPSSPETTCEVVDIQCNHSPVFVAGRYNKYSRNLPQTPWIIDGERKIESSVEELITDHLVAAFRSSSFNFSSSGREDVDVRTLGKGRPFAIELLNPHKVQFTGQEIKALQQKINTSDK--IKVRDLQIVSREAVAHMKEGEEEKTKCYCALIWIEKMVRNEDLQLLDGLEELTIAQKTPLRVLHRRPLASRSRTIHTMRTEYV--DEHHFRLYLKTQAGTYIKEFVHGDFGRTKPNVGSIMETNADILELDVESVDVD 508
BLAST of CMJ_chr3_027500.1 vs. ExPASy Swiss-Prot
Match: PUS10_DROME (Putative tRNA pseudouridine synthase Pus10 OS=Drosophila melanogaster OX=7227 GN=Pus10 PE=2 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 9.449e-42 Identity = 99/273 (36.26%), Postives = 154/273 (56.41%), Query Frame = 0 Query: 291 SETHE----FPLKKVNEPCRLECLCFRTP-IYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMC--RGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKE----IESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMN 552 +ET+E P V E +L + + P I GRY K SR +S T WI++ +R+ E SIEEII ++ P + F ++GRED+DVR LG GRPF+ EI NA+ L K+ +E +++ + +V + ++++V + T ++ GE +K+K Y AL + P+ + + + I QKTPIRVLHRR R + I + + G+ + ++ + TQAGTYIKE VHG+ GRT PS+ SI+G +I LDV + ++ Sbjct: 221 AETYEKYFQIPCSNVEESIKLTSIDLQGPLICVAGRYRKLSRELSHTPWILNGQRLMEDSIEEIIIRHVGPHFTEKLGKITFMSSGREDVDVRCLGKGRPFVLEIPNAKR---SCLTKDEAFAMERAVDA--SGMVSIHHLQVVPREELTHIKTGEEQKKKFYRALCALQEPVSVKILEQLQISASFNIQQKTPIRVLHRRPLHTRPRTIYSVTAKVHRGNPKALIIDIVTQAGTYIKELVHGEFGRTTPSLSSIIGKPMDIQALDVVGIDLD 488
BLAST of CMJ_chr3_027500.1 vs. ExPASy Swiss-Prot
Match: PUS10_THEPD (tRNA pseudouridine synthase Pus10 OS=Thermofilum pendens (strain DSM 2475 / Hrk 5) OX=368408 GN=pus10 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.153e-41 Identity = 93/238 (39.08%), Postives = 133/238 (55.88%), Query Frame = 0 Query: 314 TPIYFGGRYLKYSRNVSQTRWIIDEERMG-ESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQIL-QKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDV 549 P++ GRY KY+R + Q W +ER+ +SIEE+I L + + KFHAAGREDIDVR LG+GRPF+ EI+ R+ +L V + KINS L+ V ++ + ++ + +K Y A V +P+ DE IS + ++ Q+TP RVLHRR R+KI+ ++ KI+ F L TQ G Y+KEF+HGD GRT PSI LG ++LDV + Sbjct: 206 APVFVYGRYRKYARGLPQNPWPQPDERIKFNTSIEELIVKPALELFEAEKAKFHAAGREDIDVRTLGTGRPFVLEIKKPRKRNIDLKV--LAEKINSGAGGLIEVLDLAYTDRKTIKKLKSLASIAKKAYVARVKFEKPVDDEKLAEISKVFSNAVINQRTPTRVLHRRVDKLRKKIVYRLEARKISQDEVEFYLE--TQGGFYVKEFIHGDNGRTTPSIAEFLGNNVLSIELDVVSI 439
BLAST of CMJ_chr3_027500.1 vs. ExPASy Swiss-Prot
Match: PUS10_METST (tRNA pseudouridine synthase Pus10 OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) OX=339860 GN=pus10 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 8.771e-37 Identity = 88/249 (35.34%), Postives = 135/249 (54.22%), Query Frame = 0 Query: 315 PIYFGGRYLKYSRNVSQTRWIIDE---------ERMGES---SIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKM 551 PI+ G+Y K R + QT+W + G+ ++E++I ILPM G++ KFH +GREDIDVRMLG GRPF+ E+++ ++ +K + +NS + + + ++K V + ++ E K Y+A+ + +D I LK I Q+TPIRV HRR+ L R + I +++E+I S + L+ C Q G YIKE + GD RT PS+ SI +AE QLDV V + Sbjct: 163 PIFIEGKYRKLVRGIPQTKWPCTHCKGKGCEACDYTGQQYKDTVEDLISREILPMTNGNTTKFHGSGREDIDVRMLGEGRPFVIEVKHP--FKRKIDLKFLRVLVNSHSDGKIEINDLKYVTKERKASIKNSSVESYKIYSAIAEFENGVTSKDIYNIEKLK--TIDQRTPIRVEHRRADLIRTREIKNIEVERI-NSKKLHLIIKC-QGGLYIKELISGDNNRTKPSVSSITNNQAECTQLDVLKVHI 405
BLAST of CMJ_chr3_027500.1 vs. ExPASy Swiss-Prot
Match: PUS10_PICTO (tRNA pseudouridine synthase Pus10 OS=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) OX=263820 GN=pus10 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 5.061e-34 Identity = 88/235 (37.45%), Postives = 132/235 (56.17%), Query Frame = 0 Query: 315 PIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDV 549 P+Y G Y+K SR++SQTRWI + GES IE IIG + M ++Y H +GRED+DV MLG+GR F+ E + +L E++ ++N+ + ++ + N+ S T+ R +K Y A V + L + + S I Q+TP+RV++ RS L R K IN++ I I LL +C +AGTYIKE V+GD GRT PS+ S+ G + ++ LDV + Sbjct: 153 PVYIYGVYIKKSRDISQTRWI---HKTGES-IESIIGNELRSMTGCENYYLHGSGREDVDVMMLGNGREFVIEAAMPKRRYIDLY--ELQLRVNA--SGILFIYNLSY--SSKATVRRIKSELHEKLYIAEV--TGDLNKDIKKACSKFNNLIIEQRTPLRVINHRSDLVRRKKINYINIISIMNGRA--LLKICAEAGTYIKELVNGDNGRTVPSLSSVYGSQLQVSSLDVVKI 373
BLAST of CMJ_chr3_027500.1 vs. ExPASy Swiss-Prot
Match: PUS10_THEAC (tRNA pseudouridine synthase Pus10 OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) OX=273075 GN=pus10 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 6.182e-33 Identity = 85/238 (35.71%), Postives = 129/238 (54.20%), Query Frame = 0 Query: 316 IYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSEL--LVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQ-YAALVWISRPLQDED-FQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDV 549 IY G+Y K+ R++ QTRWI R ++E +IG G +Y H +GRED+DVRMLG+GR F+ E++N R EL +VKEI + K V + ++K + E + EK ++ Y ALV RP+ + + +L I Q+TP+RV RRS L R + I+ + + ++ + L+ +AGTYIKE V+GD GRT PS+ + G + +LDV + Sbjct: 160 IYIYGKYRKFRRDMPQTRWI---HRPNGDTVESVIGSVFTRYAGGTNYYLHGSGREDVDVRMLGNGREFVLEVENPRYREFELDPVVKEINTS-----GKGVEIFDVKFSSHDAVS---EVKLEKHRKVYDALVVSDRPIDESRLLEACINLTGKNIYQRTPLRVAQRRSDLVRTRRIDQVDLVGVSANEAEILI--SAEAGTYIKELVNGDGGRTRPSLSEMYGSPLNVKELDVIKI 384
BLAST of CMJ_chr3_027500.1 vs. ExPASy Swiss-Prot
Match: PUS10_METKA (tRNA pseudouridine synthase Pus10 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) OX=190192 GN=pus10 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.363e-32 Identity = 86/247 (34.82%), Postives = 132/247 (53.44%), Query Frame = 0 Query: 315 PIYFGGRYLKYSRNVSQTRWIIDEER------------MGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPL-QDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTD 548 PIY GRYLK R + QT+W R + S+EE+IG + +S+KFHAAGREDIDVRMLG+GRPF+ E+ + +L KEIE +IN V+V ++ + +++ +K+Y A V +P+ +D+ + + L+ + I Q+TP RVLHRR+ R K ++ K+ + G ++ G Y+KE + GD GRT PS+ ++ AE +LDV + Sbjct: 185 PIYVRGRYLKLRRGIPQTKWPCPRCRGAGCPNCDFTGKLYTESVEELIGMVLKDAFLAESHKFHAAGREDIDVRMLGNGRPFVMELLYPKRRNVDL--KEIEGEINRKVGDDVQVVGLEYGDPEDVGKVKDLSERSRKRYRAWVKFGKPVPEDKLREVLKGLERSVIEQRTPRRVLHRRADKVRRKRVHEAKLIEYDGDRA--VIEFLCDPGLYVKELISGDAGRTRPSLAELVEVEAECERLDVIE 427
BLAST of CMJ_chr3_027500.1 vs. ExPASy Swiss-Prot
Match: PUS10_METTM (tRNA pseudouridine synthase Pus10 OS=Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg) OX=79929 GN=pus10 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.461e-32 Identity = 89/251 (35.46%), Postives = 130/251 (51.79%), Query Frame = 0 Query: 315 PIYFGGRYLKYSRNVSQTRWIIDEER------------MGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQN-AREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKI---INWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDV 549 PI+ GRY K R + QT+W R M +S+EE+I +L G KFH +GRED+DVRMLG+GRPF+ EI+ A P ++ +E +IN +V V +++ ++E +K K Y A+V + + DED + L I Q+TP+RV HRR+ RE+ I+W +++ + L + + G YIKE + GD GRT PS+ SILG A LDV +V Sbjct: 159 PIFIEGRYRKLVRGIPQTKWPCRSCRGRGCSRCDYTGKMYPTSVEELISEPVLEATGGSDSKFHGSGREDVDVRMLGTGRPFVLEIKEPAIRTPD---LRALEDEINRRARGMVEVADLRFSSRNRKVELKESSRKKYKVYRAIVELEGAVSDEDLVKLEKL--DLIRQRTPLRVSHRRADRIRERRVLEISWKRLD------DHLELIIKAEGGLYIKELISGDSGRTEPSVSSILGVPARCASLDVLEV 398
BLAST of CMJ_chr3_027500.1 vs. Araport11
Match: AT1G20410.1 (| Pseudouridine synthase family protein | Chr1:7079049-7082504 REVERSE LENGTH=504 | 201606) HSP 1 Score: 545.428 bits (1404), Expect = 0.000e+0 Identity = 285/511 (55.77%), Postives = 349/511 (68.30%), Query Frame = 0 Query: 44 LPTDAVKDLLSKEVCLRCIFRLFGMQV--PICSSLSVKSLLCHVLGEQADLHQNISSVEPNICRSCLGILQFTYRDDKERVMENESACDFAIAIAELVKKEGHQIDSFSLEVSMPPIILENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMN 552 L T AVKDLLS VC RCIFRL ++ SS+S +L + + + SS IC CLGILQF + D K+ +++++S+ D+ I +LVK++ H+ DSF LEVS+P I+ENE L Y+K KY +E W + IS KDALK L + L+ L + S+FHIRLTY+ +AS + Q E KRRK DA+N SN + +N +KV EPC C R PI+F GRY KYSRNVSQ+RWIID+ERMGE+S+EEI+GGNILP C GDSYKFHAAGREDIDVRMLGSGRPFL E+QN+R++PSE +KE+E KIN E KLV VK++K +GSQ W +MREGEAEKQKQY ALVWISRPL+++DF +IS LKE +ILQKTP+RVLHRRSPL+REKII+WMK+EKI G S YFLLH+CTQAGTYIKEFVHGDLGRT PS+GSILGCRAEI+QLDVTDVKM Sbjct: 37 LHTGAVKDLLSLGVCERCIFRLVSVEAFDSDISSVSTSTLRSWLKSGDDETSASESSC-STICIVCLGILQFVFSDVKKELVKSDSSSDYVARITDLVKQDRHEFDSFGLEVSVPSTIMENERALLSYLKGKYSTEVWLQRDKIS----VKDALKVLLLDQLKASLGAESDSSSFHIRLTYT--KASDEAQGASETTHESKRRKTDAEN------------------------------GSNCISEN--------SFEKVYEPCIFSVHCNRMPIFFSGRYFKYSRNVSQSRWIIDDERMGEASVEEILGGNILPACLGDSYKFHAAGREDIDVRMLGSGRPFLIEVQNSRQLPSEQSLKEVEEKINKSEKKLVGVKDLKCIGSQCWAMMREGEAEKQKQYVALVWISRPLEEKDFNSISCLKELKILQKTPVRVLHRRSPLDREKIIHWMKVEKIKGHSHYFLLHLCTQAGTYIKEFVHGDLGRTTPSMGSILGCRAEIIQLDVTDVKMG 502
BLAST of CMJ_chr3_027500.1 vs. Araport11
Match: AT1G20410.2 (| Pseudouridine synthase family protein | Chr1:7079049-7081914 REVERSE LENGTH=351 | 201606) HSP 1 Score: 463.766 bits (1192), Expect = 3.336e-161 Identity = 235/393 (59.80%), Postives = 278/393 (70.74%), Query Frame = 0 Query: 160 LENENKLSLYVKRKYRSEAWFKERSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYSHVEASIKIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTIEVIPVDEKSSNGLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGESSIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGRPFLFEIQNAREVPSELLVKEIESKINSLENKLVRVKNIKIVGSQGWTLMREGEAEKQKQYAALVWISRPLQDEDFQTISSLKETQILQKTPIRVLHRRSPLEREKIINWMKIEKIAGSSQYFLLHMCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMN 552 +ENE L Y+K KY +E W + IS KDALK L + L+ L + S+FHIRLTY+ +AS + Q E KRRK DA+N SN + +N +KV EPC C R PI+F GRY KYSRNVSQ+RWIID+ERMGE+S+EEI+GGNILP C GDSYKFHAAGREDIDVRMLGSGRPFL E+QN+R++PSE +KE+E KIN E KLV VK++K +GSQ W +MREGEAEKQKQY ALVWISRPL+++DF +IS LKE +ILQKTP+RVLHRRSPL+REKII+WMK+EKI G S YFLLH+CTQAGTYIKEFVHGDLGRT PS+GSILGCRAEI+QLDVTDVKM Sbjct: 1 MENERALLSYLKGKYSTEVWLQRDKIS----VKDALKVLLLDQLKASLGAESDSSSFHIRLTYT--KASDEAQGASETTHESKRRKTDAEN------------------------------GSNCISEN--------SFEKVYEPCIFSVHCNRMPIFFSGRYFKYSRNVSQSRWIIDDERMGEASVEEILGGNILPACLGDSYKFHAAGREDIDVRMLGSGRPFLIEVQNSRQLPSEQSLKEVEEKINKSEKKLVGVKDLKCIGSQCWAMMREGEAEKQKQYVALVWISRPLEEKDFNSISCLKELKILQKTPVRVLHRRSPLDREKIIHWMKVEKIKGHSHYFLLHLCTQAGTYIKEFVHGDLGRTTPSMGSILGCRAEIIQLDVTDVKMG 349 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_027500.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_027500.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_027500.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_027500.1_cmj_v1 ID=CMJ_chr3_027500.1_cmj_v1; Name=CMJ_chr3_027500.1; organism=Citrus maxima; type=mRNA; length=1674bpback to top protein sequence of CMJ_chr3_027500.1_cmj_v1 >CMJ_chr3_027500.1_cmj_v1 ID=CMJ_chr3_027500.1_cmj_v1; Name=CMJ_chr3_027500.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=558bpback to top mRNA from alignment at chr3:41812286..41818654- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=6369bp; location=Sequence derived from: chr3:41812286..41818654- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:41812286..41818654- >CMJ_chr3_027500.1_cmj_v1 ID=CMJ_chr3_027500.1_cmj_v1; Name=CMJ_chr3_027500.1; organism=Citrus maxima; type=CDS; length=1674bp; location=Sequence derived from: chr3:41812286..41818654- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|