CMJ_chr3_028420.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_028420.1 vs. ExPASy TrEMBL
Match: A0A2K3K2U4|A0A2K3K2U4_TRIPR (DEAD-box ATP-dependent RNA helicase 42-like protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g060272 PE=4 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.258e-24 Identity = 50/80 (62.50%), Postives = 57/80 (71.25%), Query Frame = 0 Query: 8 LGMGILAFRFMGQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
+ G G +QTDRE TISDF+SNVC+LL+AT +AARGLDVK+LEL INF PNHYEDY HRV RTGRAG
Sbjct: 62 MKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFNV-----PNHYEDYVHRVGRTGRAG 136
BLAST of CMJ_chr3_028420.1 vs. ExPASy TrEMBL
Match: A0A1R3JPV4|A0A1R3JPV4_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_15052 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.440e-23 Identity = 51/69 (73.91%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +QTDRE TISDF+SNVCSLLIAT +AARGLDVK+LEL INF PNHYEDY HRV RTGRAG
Sbjct: 373 GAKDQTDRESTISDFKSNVCSLLIATSIAARGLDVKELELVINFDV-----PNHYEDYVHRVGRTGRAG 436
BLAST of CMJ_chr3_028420.1 vs. ExPASy TrEMBL
Match: A0A1R3GLQ7|A0A1R3GLQ7_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_25174 PE=4 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.464e-23 Identity = 51/69 (73.91%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +QTDRE TISDF+SNVCSLLIAT +AARGLDVK+LEL INF PNHYEDY HRV RTGRAG
Sbjct: 758 GAKDQTDRESTISDFKSNVCSLLIATSIAARGLDVKELELVINFDV-----PNHYEDYVHRVGRTGRAG 821
BLAST of CMJ_chr3_028420.1 vs. ExPASy TrEMBL
Match: A0A251INW9|A0A251INW9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G001400 PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.851e-23 Identity = 54/83 (65.06%), Postives = 58/83 (69.88%), Query Frame = 0 Query: 5 GICLGMGILAFRFMGQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G L G G +QTDRE TISDF+SNVC+LLIAT VAARGLDVK+LEL INF PNHYEDY HRV RTGRAG
Sbjct: 776 GDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVINFDV-----PNHYEDYVHRVGRTGRAG 853
BLAST of CMJ_chr3_028420.1 vs. ExPASy TrEMBL
Match: A0A2K3MKY7|A0A2K3MKY7_TRIPR (DEAD-box ATP-dependent RNA helicase 42-like protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g047555 PE=4 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.865e-23 Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +QTDRE TISDF+SNVC+LL+AT +AARGLDVK+LEL INF PNHYEDY HRV RTGRAG
Sbjct: 12 GAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFDV-----PNHYEDYVHRVGRTGRAG 75
BLAST of CMJ_chr3_028420.1 vs. ExPASy TrEMBL
Match: A0A7J8N2U0|A0A7J8N2U0_9ROSI (Uncharacterized protein OS=Gossypium lobatum OX=34289 GN=Golob_004907 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.069e-23 Identity = 53/80 (66.25%), Postives = 57/80 (71.25%), Query Frame = 0 Query: 8 LGMGILAFRFMGQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
L G G +QTDRE TISDF+SNVC+LLIAT VAARGLDVK+LEL INF PNHYEDY HRV RTGRAG
Sbjct: 135 LKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVINFDV-----PNHYEDYVHRVGRTGRAG 209
BLAST of CMJ_chr3_028420.1 vs. ExPASy TrEMBL
Match: A0A5N6R963|A0A5N6R963_9ROSI (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014146 PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.195e-23 Identity = 52/77 (67.53%), Postives = 56/77 (72.73%), Query Frame = 0 Query: 11 GILAFRFMGQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G G +QTDRE TISDF+SNVC+LLIAT VAARGLDVK+LEL INF PNHYEDY HRV RTGRAG
Sbjct: 626 GYACLSLHGAKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVINFDV-----PNHYEDYVHRVGRTGRAG 697
BLAST of CMJ_chr3_028420.1 vs. ExPASy TrEMBL
Match: A0A067F2E1|A0A067F2E1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g001264mg PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.324e-23 Identity = 53/80 (66.25%), Postives = 57/80 (71.25%), Query Frame = 0 Query: 8 LGMGILAFRFMGQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
L G G +QTDRE TISDF+SNVC+LLIAT VAARGLDVK+LEL INF PNHYEDY HRV RTGRAG
Sbjct: 735 LKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVINF-----DAPNHYEDYVHRVGRTGRAG 809
BLAST of CMJ_chr3_028420.1 vs. ExPASy TrEMBL
Match: A0A2H5NQN2|A0A2H5NQN2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_067180 PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.326e-23 Identity = 53/80 (66.25%), Postives = 57/80 (71.25%), Query Frame = 0 Query: 8 LGMGILAFRFMGQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
L G G +QTDRE TISDF+SNVC+LLIAT VAARGLDVK+LEL INF PNHYEDY HRV RTGRAG
Sbjct: 614 LKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVINF-----DAPNHYEDYVHRVGRTGRAG 688
BLAST of CMJ_chr3_028420.1 vs. ExPASy TrEMBL
Match: V4U8B7|V4U8B7_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10004206mg PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.334e-23 Identity = 53/80 (66.25%), Postives = 57/80 (71.25%), Query Frame = 0 Query: 8 LGMGILAFRFMGQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
L G G +QTDRE TISDF+SNVC+LLIAT VAARGLDVK+LEL INF PNHYEDY HRV RTGRAG
Sbjct: 733 LKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVINF-----DAPNHYEDYVHRVGRTGRAG 807
BLAST of CMJ_chr3_028420.1 vs. ExPASy Swiss-Prot
Match: RH42_ORYSJ (DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0159900 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.018e-24 Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +QTDRE T++DF+SNVCSLLIAT VAARGLDVK+LEL +N+ PNHYEDY HRV RTGRAG
Sbjct: 703 GGKDQTDRESTLADFKSNVCSLLIATSVAARGLDVKELELVVNYDV-----PNHYEDYVHRVGRTGRAG 766
BLAST of CMJ_chr3_028420.1 vs. ExPASy Swiss-Prot
Match: RH42_ARATH (DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana OX=3702 GN=RH42 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 2.117e-24 Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +QTDRE TISDF+++VC+LLIAT VAARGLDVK+LEL +NF PNHYEDY HRV RTGRAG
Sbjct: 808 GGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNF-----DAPNHYEDYVHRVGRTGRAG 871
BLAST of CMJ_chr3_028420.1 vs. ExPASy Swiss-Prot
Match: RH45_ARATH (DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana OX=3702 GN=RH45 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.874e-21 Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0 Query: 26 RELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
+E +ISDF+S+VC+LLIAT VAARGLDVK+LEL +NF PNHYEDY HRV RTGRAG
Sbjct: 653 QEKSISDFKSDVCNLLIATSVAARGLDVKELELVVNF-----DAPNHYEDYVHRVGRTGRAG 709
BLAST of CMJ_chr3_028420.1 vs. ExPASy Swiss-Prot
Match: PRP5_MAGO7 (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=PRP5 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 7.335e-20 Identity = 43/79 (54.43%), Postives = 54/79 (68.35%), Query Frame = 0 Query: 9 GMGILAFRFMGQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G G ++ G +Q DR+ TISDF+S VC ++IAT VAARGLDVK+L+L +N+ PNH EDY HR RTGRAG
Sbjct: 652 GYGCMSLH--GGKDQVDRDSTISDFKSGVCPVMIATSVAARGLDVKQLKLVVNY-----DAPNHLEDYVHRAGRTGRAG 723
BLAST of CMJ_chr3_028420.1 vs. ExPASy Swiss-Prot
Match: PRP5_NEUCR (Pre-mRNA-processing ATP-dependent RNA helicase prp-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=prp-5 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.995e-19 Identity = 41/69 (59.42%), Postives = 48/69 (69.57%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +Q DR TISDF+ VC +LIAT +AARGLDVK+L+L IN+ PNH EDY HR RTGRAG
Sbjct: 843 GGKDQEDRNSTISDFKKGVCPILIATSIAARGLDVKQLKLVINY-----DAPNHLEDYVHRAGRTGRAG 906
BLAST of CMJ_chr3_028420.1 vs. ExPASy Swiss-Prot
Match: PRP5_CHAGB (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=PRP5 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.014e-19 Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +Q DR TISDF+ VC ++IAT VAARGLDVK+L+L +N+ PNH EDY HR RTGRAG
Sbjct: 711 GGKDQEDRNSTISDFKKGVCPIMIATSVAARGLDVKQLKLVVNY-----DAPNHLEDYVHRAGRTGRAG 774
BLAST of CMJ_chr3_028420.1 vs. ExPASy Swiss-Prot
Match: PRP5_GIBZE (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=PRP5 PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.501e-18 Identity = 41/69 (59.42%), Postives = 48/69 (69.57%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +Q DR+ TISDF+ V +LIAT VAARGLDVK+L+L IN+ PNH EDY HR RTGRAG
Sbjct: 859 GGKDQIDRDSTISDFKKGVVPILIATSVAARGLDVKQLKLVINY-----DAPNHLEDYVHRAGRTGRAG 922
BLAST of CMJ_chr3_028420.1 vs. ExPASy Swiss-Prot
Match: PRP5_SCLS1 (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=prp5 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.597e-18 Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +Q DR+ TI DF++ V ++IAT VAARGLDVK+L+L +NF PNH EDY HR RTGRAG
Sbjct: 765 GGKDQVDRDSTIDDFKAGVVPIMIATSVAARGLDVKQLKLVVNF-----DAPNHLEDYVHRAGRTGRAG 828
BLAST of CMJ_chr3_028420.1 vs. ExPASy Swiss-Prot
Match: PRP5_BOTFB (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=prp5 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.603e-18 Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +Q DR+ TI DF++ V ++IAT VAARGLDVK+L+L +NF PNH EDY HR RTGRAG
Sbjct: 836 GGKDQVDRDSTIDDFKAGVVPIMIATSVAARGLDVKQLKLVVNF-----DAPNHLEDYVHRAGRTGRAG 899
BLAST of CMJ_chr3_028420.1 vs. ExPASy Swiss-Prot
Match: DDX46_DANRE (Probable ATP-dependent RNA helicase DDX46 OS=Danio rerio OX=7955 GN=ddx46 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.080e-18 Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +Q DR+ I+DF++ C LL+AT VAARGLDVK+L L +N+ PNHYEDY HR RTGRAG
Sbjct: 619 GGIDQYDRDSIINDFKNGACRLLVATSVAARGLDVKQLILVVNY-----SCPNHYEDYVHRAGRTGRAG 682
BLAST of CMJ_chr3_028420.1 vs. Araport11
Match: AT1G20920.2 (| P-loop containing nucleoside triphosphate hydrolases superfamily protein | Chr1:7286356-7288842 FORWARD LENGTH=828 | 201606) HSP 1 Score: 98.2117 bits (243), Expect = 2.141e-25 Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +QTDRE TISDF+++VC+LLIAT VAARGLDVK+LEL +NF PNHYEDY HRV RTGRAG
Sbjct: 470 GGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNF-----DAPNHYEDYVHRVGRTGRAG 533
BLAST of CMJ_chr3_028420.1 vs. Araport11
Match: AT1G20920.7 (| P-loop containing nucleoside triphosphate hydrolases superfamily protein | Chr1:7285342-7288842 FORWARD LENGTH=1166 | 201606) HSP 1 Score: 98.2117 bits (243), Expect = 2.166e-25 Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +QTDRE TISDF+++VC+LLIAT VAARGLDVK+LEL +NF PNHYEDY HRV RTGRAG
Sbjct: 808 GGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNF-----DAPNHYEDYVHRVGRTGRAG 871
BLAST of CMJ_chr3_028420.1 vs. Araport11
Match: AT1G20920.6 (| P-loop containing nucleoside triphosphate hydrolases superfamily protein | Chr1:7285342-7288842 FORWARD LENGTH=1166 | 201606) HSP 1 Score: 98.2117 bits (243), Expect = 2.166e-25 Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +QTDRE TISDF+++VC+LLIAT VAARGLDVK+LEL +NF PNHYEDY HRV RTGRAG
Sbjct: 808 GGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNF-----DAPNHYEDYVHRVGRTGRAG 871
BLAST of CMJ_chr3_028420.1 vs. Araport11
Match: AT1G20920.5 (| P-loop containing nucleoside triphosphate hydrolases superfamily protein | Chr1:7285342-7288842 FORWARD LENGTH=1166 | 201606) HSP 1 Score: 98.2117 bits (243), Expect = 2.166e-25 Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +QTDRE TISDF+++VC+LLIAT VAARGLDVK+LEL +NF PNHYEDY HRV RTGRAG
Sbjct: 808 GGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNF-----DAPNHYEDYVHRVGRTGRAG 871
BLAST of CMJ_chr3_028420.1 vs. Araport11
Match: AT1G20920.4 (| P-loop containing nucleoside triphosphate hydrolases superfamily protein | Chr1:7285342-7288842 FORWARD LENGTH=1166 | 201606) HSP 1 Score: 98.2117 bits (243), Expect = 2.166e-25 Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +QTDRE TISDF+++VC+LLIAT VAARGLDVK+LEL +NF PNHYEDY HRV RTGRAG
Sbjct: 808 GGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNF-----DAPNHYEDYVHRVGRTGRAG 871
BLAST of CMJ_chr3_028420.1 vs. Araport11
Match: AT1G20920.3 (| P-loop containing nucleoside triphosphate hydrolases superfamily protein | Chr1:7285342-7288842 FORWARD LENGTH=1166 | 201606) HSP 1 Score: 98.2117 bits (243), Expect = 2.166e-25 Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +QTDRE TISDF+++VC+LLIAT VAARGLDVK+LEL +NF PNHYEDY HRV RTGRAG
Sbjct: 808 GGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNF-----DAPNHYEDYVHRVGRTGRAG 871
BLAST of CMJ_chr3_028420.1 vs. Araport11
Match: AT1G20920.1 (| P-loop containing nucleoside triphosphate hydrolases superfamily protein | Chr1:7285342-7288842 FORWARD LENGTH=1166 | 201606) HSP 1 Score: 98.2117 bits (243), Expect = 2.166e-25 Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 0 Query: 19 GQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G +QTDRE TISDF+++VC+LLIAT VAARGLDVK+LEL +NF PNHYEDY HRV RTGRAG
Sbjct: 808 GGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNF-----DAPNHYEDYVHRVGRTGRAG 871
BLAST of CMJ_chr3_028420.1 vs. Araport11
Match: AT3G09620.1 (| P-loop containing nucleoside triphosphate hydrolases superfamily protein | Chr3:2949152-2952205 REVERSE LENGTH=989 | 201606) HSP 1 Score: 87.8113 bits (216), Expect = 1.010e-21 Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0 Query: 26 RELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
+E +ISDF+S+VC+LLIAT VAARGLDVK+LEL +NF PNHYEDY HRV RTGRAG
Sbjct: 653 QEKSISDFKSDVCNLLIATSVAARGLDVKELELVVNF-----DAPNHYEDYVHRVGRTGRAG 709
BLAST of CMJ_chr3_028420.1 vs. Araport11
Match: AT3G09620.2 (| P-loop containing nucleoside triphosphate hydrolases superfamily protein | Chr3:2949152-2952208 REVERSE LENGTH=990 | 201606) HSP 1 Score: 87.8113 bits (216), Expect = 1.010e-21 Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0 Query: 26 RELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
+E +ISDF+S+VC+LLIAT VAARGLDVK+LEL +NF PNHYEDY HRV RTGRAG
Sbjct: 654 QEKSISDFKSDVCNLLIATSVAARGLDVKELELVVNF-----DAPNHYEDYVHRVGRTGRAG 710
BLAST of CMJ_chr3_028420.1 vs. Araport11
Match: AT1G31970.1 (| DEA(D/H)-box RNA helicase family protein | Chr1:11479921-11482707 FORWARD LENGTH=537 | 201606) HSP 1 Score: 65.855 bits (159), Expect = 4.968e-14 Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 0 Query: 11 GILAFRFMGQNNQTDRELTISDFESNVCSLLIATGVAARGLDVKKLELGINFIYIYIYPPNHYEDYAHRVVRTGRAG 87
G A G Q++R ++S F+ C LL+AT VAARGLD+ +E+ IN+ + P EDY HR+ RTGRAG
Sbjct: 390 GWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTF-----PLTTEDYVHRIGRTGRAG 461 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_028420.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_028420.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_028420.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_028420.1_cmj_v1 ID=CMJ_chr3_028420.1_cmj_v1; Name=CMJ_chr3_028420.1; organism=Citrus maxima; type=mRNA; length=264bpback to top protein sequence of CMJ_chr3_028420.1_cmj_v1 >CMJ_chr3_028420.1_cmj_v1 ID=CMJ_chr3_028420.1_cmj_v1; Name=CMJ_chr3_028420.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=88bpback to top mRNA from alignment at chr3:42369204..42369467+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=264bp; location=Sequence derived from: chr3:42369204..42369467+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:42369204..42369467+ >CMJ_chr3_028420.1_cmj_v1 ID=CMJ_chr3_028420.1_cmj_v1; Name=CMJ_chr3_028420.1; organism=Citrus maxima; type=CDS; length=264bp; location=Sequence derived from: chr3:42369204..42369467+ (Citrus maximaback to top |