CMJ_chr3_028670.3
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr3_028670.3 vs. ExPASy TrEMBL
Match: A0A067HC29|A0A067HC29_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g025199mg PE=3 SV=1) HSP 1 Score: 429.098 bits (1102), Expect = 3.938e-151 Identity = 210/214 (98.13%), Postives = 211/214 (98.60%), Query Frame = 0 Query: 1 MQLQLRSSSSASALFSAVKVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP--MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCMLLLTSLLTSADWNMAV 212
MQLQLRSSSSASALFSAV+VKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSA WKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCMLLLTSLLTSADWNMAV
Sbjct: 1 MQLQLRSSSSASALFSAVQVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSASWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCMLLLTSLLTSADWNMAV 214
BLAST of CMJ_chr3_028670.3 vs. ExPASy TrEMBL
Match: A0A2H5PAI4|A0A2H5PAI4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_118640 PE=3 SV=1) HSP 1 Score: 424.861 bits (1091), Expect = 4.462e-150 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0 Query: 1 MQLQLRSSSSASALFSAVKVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCMLLLTSLLTSAD 207
MQLQLRSSSSASALFSAV+VKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCMLLLTSLLTSAD
Sbjct: 1 MQLQLRSSSSASALFSAVQVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCMLLLTSLLTSAD 207
BLAST of CMJ_chr3_028670.3 vs. ExPASy TrEMBL
Match: A0A067H326|A0A067H326_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g025199mg PE=3 SV=1) HSP 1 Score: 416.772 bits (1070), Expect = 6.620e-147 Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 0 Query: 1 MQLQLRSSSSASALFSAVKVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP--MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCMLLLTSLLTSAD 207
MQLQLRSSSSASALFSAV+VKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSA WKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCMLLLTSLLTSAD
Sbjct: 1 MQLQLRSSSSASALFSAVQVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSASWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCMLLLTSLLTSAD 209
BLAST of CMJ_chr3_028670.3 vs. ExPASy TrEMBL
Match: V4V993|V4V993_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002303mg PE=3 SV=1) HSP 1 Score: 395.586 bits (1015), Expect = 4.390e-138 Identity = 198/214 (92.52%), Postives = 199/214 (92.99%), Query Frame = 0 Query: 1 MQLQLRSSSSASALFSAVKVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP--MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCMLLLTSLLTSADWNMAV 212
MQLQLRSSSSASALFSAV+VKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ ELHGCMLLLTSLLTSADWNMAV
Sbjct: 1 MQLQLRSSSSASALFSAVQVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ-------------ELHGCMLLLTSLLTSADWNMAV 201
BLAST of CMJ_chr3_028670.3 vs. ExPASy TrEMBL
Match: A0A067HBT9|A0A067HBT9_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g025199mg PE=3 SV=1) HSP 1 Score: 392.889 bits (1008), Expect = 4.689e-137 Identity = 197/214 (92.06%), Postives = 198/214 (92.52%), Query Frame = 0 Query: 1 MQLQLRSSSSASALFSAVKVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP--MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCMLLLTSLLTSADWNMAV 212
MQLQLRSSSSASALFSAV+VKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSA WKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ ELHGCMLLLTSLLTSADWNMAV
Sbjct: 1 MQLQLRSSSSASALFSAVQVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSASWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ-------------ELHGCMLLLTSLLTSADWNMAV 201
BLAST of CMJ_chr3_028670.3 vs. ExPASy TrEMBL
Match: V4T6C5|V4T6C5_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002303mg PE=3 SV=1) HSP 1 Score: 383.259 bits (983), Expect = 9.916e-134 Identity = 193/209 (92.34%), Postives = 194/209 (92.82%), Query Frame = 0 Query: 1 MQLQLRSSSSASALFSAVKVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP--MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCMLLLTSLLTSAD 207
MQLQLRSSSSASALFSAV+VKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ ELHGCMLLLTSLLTSAD
Sbjct: 1 MQLQLRSSSSASALFSAVQVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ-------------ELHGCMLLLTSLLTSAD 196
BLAST of CMJ_chr3_028670.3 vs. ExPASy TrEMBL
Match: A0A2H5PAJ0|A0A2H5PAJ0_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_118640 PE=3 SV=1) HSP 1 Score: 365.54 bits (937), Expect = 8.209e-127 Identity = 179/187 (95.72%), Postives = 181/187 (96.79%), Query Frame = 0 Query: 1 MQLQLRSSSSASALFSAVKVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGL 187
MQLQLRSSSSASALFSAV+VKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ + NGL
Sbjct: 1 MQLQLRSSSSASALFSAVQVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ----VCRNGL 183
BLAST of CMJ_chr3_028670.3 vs. ExPASy TrEMBL
Match: V4TGB5|V4TGB5_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002303mg PE=3 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 2.435e-126 Identity = 178/186 (95.70%), Postives = 181/186 (97.31%), Query Frame = 0 Query: 1 MQLQLRSSSSASALFSAVKVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP--MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTH 184
MQLQLRSSSSASALFSAV+VKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQG++ H
Sbjct: 1 MQLQLRSSSSASALFSAVQVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEH 186
BLAST of CMJ_chr3_028670.3 vs. ExPASy TrEMBL
Match: A0A067H0E9|A0A067H0E9_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g025199mg PE=3 SV=1) HSP 1 Score: 361.303 bits (926), Expect = 4.356e-125 Identity = 177/186 (95.16%), Postives = 180/186 (96.77%), Query Frame = 0 Query: 1 MQLQLRSSSSASALFSAVKVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP--MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTH 184
MQLQLRSSSSASALFSAV+VKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSA WKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQG++ H
Sbjct: 1 MQLQLRSSSSASALFSAVQVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSASWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGIWLCEH 186
BLAST of CMJ_chr3_028670.3 vs. ExPASy TrEMBL
Match: V4SLV6|V4SLV6_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002303mg PE=3 SV=1) HSP 1 Score: 359.762 bits (922), Expect = 2.058e-124 Identity = 181/200 (90.50%), Postives = 184/200 (92.00%), Query Frame = 0 Query: 1 MQLQLRSSSSASALFSAVKVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP--MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELH-GCML 197
MQLQLRSSSSASALFSAV+VKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNP MASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ + NGL + C L
Sbjct: 1 MQLQLRSSSSASALFSAVQVKPPSSPPVRVKALFTKNPGSGTLKNSNSNTNPNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ----VCRNGLGFRNYSLSCFL 196
BLAST of CMJ_chr3_028670.3 vs. ExPASy Swiss-Prot
Match: YE72_SCHPO (UPF0047 protein C4A8.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4A8.02c PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.061e-34 Identity = 59/117 (50.43%), Postives = 85/117 (72.65%), Query Frame = 0 Query: 63 QKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGM 179
Q+ +TL +G ++IT +VK++ + L F G + F+ HTSA+LTINEN+D+D R D L+KIVPE SA ++HT EG DDMPAH+KSS+ G +LT+PIT+G+L++GTWQ +
Sbjct: 5 QRIITLDRRSKGFYIITNDLVKKLPE-LKSFSSGTVNFFIQHTSAALTINENWDADTRADMNDILDKIVPE--SAGYRHTAEGLDDMPAHVKSSLIGPSLTVPITNGKLSLGTWQDI 118
BLAST of CMJ_chr3_028670.3 vs. ExPASy Swiss-Prot
Match: YJBQ_ECOLI (UPF0047 protein YjbQ OS=Escherichia coli (strain K12) OX=83333 GN=yjbQ PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.768e-34 Identity = 60/124 (48.39%), Postives = 81/124 (65.32%), Query Frame = 0 Query: 61 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTH 184
W QKT+TL RG HL+T +I+ ++A D+ GL HL L HTSASLT+NEN D VR D E F + VP+ + ++H EG DDMP+HIKSSM G +L +P+ G++ GTWQG++ H
Sbjct: 2 WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPD--NGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEH 122
BLAST of CMJ_chr3_028670.3 vs. ExPASy Swiss-Prot
Match: YJBQ_ECO57 (UPF0047 protein YjbQ OS=Escherichia coli O157:H7 OX=83334 GN=yjbQ PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.768e-34 Identity = 60/124 (48.39%), Postives = 81/124 (65.32%), Query Frame = 0 Query: 61 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTH 184
W QKT+TL RG HL+T +I+ ++A D+ GL HL L HTSASLT+NEN D VR D E F + VP+ + ++H EG DDMP+HIKSSM G +L +P+ G++ GTWQG++ H
Sbjct: 2 WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPD--NGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEH 122
BLAST of CMJ_chr3_028670.3 vs. ExPASy Swiss-Prot
Match: YJBQ_SALTY (UPF0047 protein YjbQ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=yjbQ PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.910e-27 Identity = 61/125 (48.80%), Postives = 82/125 (65.60%), Query Frame = 0 Query: 61 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHN 185
W Q+T+TL RG HLIT +I +++ L + GL HL LLHTSASLT+NEN D VR D E K VP+ +A ++H EG DDMP+HIKSS+ G +L +P+ G+L +GTWQG++ H
Sbjct: 2 WYQRTITLSEKPRGFHLITDEITDKLS-GLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLGEHR 123
BLAST of CMJ_chr3_028670.3 vs. ExPASy Swiss-Prot
Match: YJBQ_SALTI (UPF0047 protein YjbQ OS=Salmonella typhi OX=90370 GN=yjbQ PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.910e-27 Identity = 61/125 (48.80%), Postives = 82/125 (65.60%), Query Frame = 0 Query: 61 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHN 185
W Q+T+TL RG HLIT +I +++ L + GL HL LLHTSASLT+NEN D VR D E K VP+ +A ++H EG DDMP+HIKSS+ G +L +P+ G+L +GTWQG++ H
Sbjct: 2 WYQRTITLSEKPRGFHLITDEITDKLS-GLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLGEHR 123
BLAST of CMJ_chr3_028670.3 vs. ExPASy Swiss-Prot
Match: Y1880_SYNY3 (UPF0047 protein sll1880 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll1880 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.613e-23 Identity = 54/131 (41.22%), Postives = 76/131 (58.02%), Query Frame = 0 Query: 56 ASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPE-GRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHN 185
A+ R Q+ + + + H KI + + Q S K GL +F+ HTSASL I EN D DV D F ++VPE GR ++H+ EG DDMPAHI+S++ + IPI +G+L +GTWQG+F H
Sbjct: 5 AATFRQHQEILVIATQGKSLHNFNSKI-QAVVQH-SGVKTGLCTVFVRHTSASLIIQENADPDVLTDLAIFFAQLVPEDGRR--YRHSTEGLDDMPAHIRSALTKTSEHIPIVNGRLGLGTWQGVFLWEHR 131
BLAST of CMJ_chr3_028670.3 vs. ExPASy Swiss-Prot
Match: Y1081_METJA (UPF0047 protein MJ1081 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1081 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.621e-21 Identity = 51/117 (43.59%), Postives = 74/117 (63.25%), Query Frame = 0 Query: 78 ITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHT-LEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELH 193
ITP I+ I++ S+ K G+A +++ HT+A +TINEN D V+ D FL+ ++P+ W T LEG D AHIKSS+ GC+ TI I DG+ +GTWQG+F +G R +E +
Sbjct: 23 ITPYIISAISE--SKVKDGIAVIYVPHTTAGITINENADPSVKHDIINFLSHLIPKN----WNFTHLEGNSD--AHIKSSLVGCSQTIIIKDGKPLLGTWQGIFFAEFDGPRRREFY 131
BLAST of CMJ_chr3_028670.3 vs. ExPASy Swiss-Prot
Match: YUGU_BACSU (UPF0047 protein YugU OS=Bacillus subtilis (strain 168) OX=224308 GN=yugU PE=3 SV=2) HSP 1 Score: 64.6994 bits (156), Expect = 3.287e-12 Identity = 38/120 (31.67%), Postives = 64/120 (53.33%), Query Frame = 0 Query: 82 IVKEIAQDLSE--FKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEG--PDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKELHGCML 197
I +E+ L E G A ++ HT+A +TINEN D DV+ D +++ P W+H L+ + AH+KSS G + + + +G+L +GTWQG++ +G R + + M+
Sbjct: 18 ITREVEAFLQETGITSGAALIYCPHTTAGITINENADPDVKKDMLRRFDEVYP------WEHELDRHMEGNTAAHMKSSTVGASQHVIVENGRLILGTWQGIYFCEFDGPRTRTCYIKMM 131
BLAST of CMJ_chr3_028670.3 vs. ExPASy Swiss-Prot
Match: Y2050_ARCFU (UPF0047 protein AF_2050 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) OX=224325 GN=AF_2050 PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 2.904e-10 Identity = 33/102 (32.35%), Postives = 60/102 (58.82%), Query Frame = 0 Query: 92 EFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKH-TLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHNGLRVKEL 192
E + GL ++ HT+ +L INE + + +D F+ K+VP G+ +KH L+ D AH+K+++ G ++ +P+ G+L +GTWQ + L +G R + +
Sbjct: 25 ESRDGLVLVYTPHTTTALVINEG-ERGLLEDILEFMEKLVPYGKG--YKHDRLDSNAD--AHLKATLLGNSVVVPVESGKLALGTWQRILFLEFDGPRTRRV 121
BLAST of CMJ_chr3_028670.3 vs. Araport11
Match: AT1G21065.1 (| secondary thiamine-phosphate synthase enzyme | Chr1:7374210-7375644 FORWARD LENGTH=217 | 201606) HSP 1 Score: 230.72 bits (587), Expect = 7.997e-77 Identity = 113/181 (62.43%), Postives = 138/181 (76.24%), Query Frame = 0 Query: 6 RSSSSASALFSAVKVKPPSSPPVRVKALFT-KNPGSGTLKNSNSNTNPNPMASNPRWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQGMFTLTHN 185
+ + S++ LFS V P+RV+++ T NP + ++S S +WAQKT+TLPPLRRGCHLITPKI+KEI +DLS+F CGLAH+FL HTSASLTINENYD DV+ DTETFLN+IVPEG SAPW+HT+EGPDDMPAHIKSSMFGC LTIPIT G+L+MGTWQG++ H
Sbjct: 37 QKAMSSTFLFSGVV-------PLRVRSVLTPANPATDRASMASS--------SGAKWAQKTITLPPLRRGCHLITPKILKEIREDLSDFNCGLAHVFLQHTSASLTINENYDPDVQADTETFLNRIVPEGNSAPWRHTMEGPDDMPAHIKSSMFGCQLTIPITKGKLSMGTWQGIWLCEHR 202 The following BLAST results are available for this feature:
BLAST of CMJ_chr3_028670.3 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_028670.3 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 9 Position : 0 Zoom : x 1
BLAST of CMJ_chr3_028670.3 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 1 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr3_028670.3_cmj_v1 ID=CMJ_chr3_028670.3_cmj_v1; Name=CMJ_chr3_028670.3; organism=Citrus maxima; type=mRNA; length=639bpback to top protein sequence of CMJ_chr3_028670.3_cmj_v1 >CMJ_chr3_028670.3_cmj_v1 ID=CMJ_chr3_028670.3_cmj_v1; Name=CMJ_chr3_028670.3_cmj_v1; organism=Citrus maxima; type=polypeptide; length=213bpback to top mRNA from alignment at chr3:42516105..42519970+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3866bp; location=Sequence derived from: chr3:42516105..42519970+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr3:42516105..42519970+ >CMJ_chr3_028670.3_cmj_v1 ID=CMJ_chr3_028670.3_cmj_v1; Name=CMJ_chr3_028670.3; organism=Citrus maxima; type=CDS; length=639bp; location=Sequence derived from: chr3:42516105..42519970+ (Citrus maximaback to top |