CMJ_chr5_007360.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of CMJ_chr5_007360.1 vs. ExPASy TrEMBL
Match: A0A067H5L1|A0A067H5L1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g043757mg PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 1.191e-81 Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0 Query: 1 MARQERFVVKAVLLLGLTFLSCMVQGAEPNYSLDFDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG 129 MARQERFVVKAVLLLGLTFLS +VQGAEPNYSL FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG Sbjct: 1 MARQERFVVKAVLLLGLTFLSSVVQGAEPNYSLYFDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG 129 HSP 2 Score: 126.716 bits (317), Expect = 3.852e-31 Identity = 61/72 (84.72%), Postives = 65/72 (90.28%), Query Frame = 0 Query: 115 ILFENIDGLLLTGGGVNLNCSSVVPCDGVELVGVDLAFDVGFAKKAEANLPFSSSCANAEAKFEGKISPPPC 186 + ++NI G +T GVNLNCSSVVPCDGVELVGVDLAFDVG AKKAEANLPFSSSCANAEAKFEGKISPPPC Sbjct: 336 VHYKNIKGTSITNVGVNLNCSSVVPCDGVELVGVDLAFDVGSAKKAEANLPFSSSCANAEAKFEGKISPPPC 407
BLAST of CMJ_chr5_007360.1 vs. ExPASy TrEMBL
Match: V4TBI3|V4TBI3_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10023712mg PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 1.372e-81 Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0 Query: 1 MARQERFVVKAVLLLGLTFLSCMVQGAEPNYSLDFDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG 129 MARQERFVVKAVLLLGLTFLS +VQGAEPNYSL FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG Sbjct: 1 MARQERFVVKAVLLLGLTFLSSVVQGAEPNYSLYFDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG 129 HSP 2 Score: 126.331 bits (316), Expect = 4.187e-31 Identity = 61/72 (84.72%), Postives = 65/72 (90.28%), Query Frame = 0 Query: 115 ILFENIDGLLLTGGGVNLNCSSVVPCDGVELVGVDLAFDVGFAKKAEANLPFSSSCANAEAKFEGKISPPPC 186 + ++NI G +T GVNLNCSSVVPCDGVELVGVDLAFDVG AKKAEANLPFSSSCANAEAKFEGKISPPPC Sbjct: 336 VHYKNIKGTSITNVGVNLNCSSVVPCDGVELVGVDLAFDVGSAKKAEANLPFSSSCANAEAKFEGKISPPPC 407
BLAST of CMJ_chr5_007360.1 vs. ExPASy TrEMBL
Match: A0A6N2MZ67|A0A6N2MZ67_SALVM (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS440573 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.023e-36 Identity = 74/140 (52.86%), Postives = 91/140 (65.00%), Query Frame = 0 Query: 8 VVKAVLLLGLTFLSCMVQGA-EPNYSLD---------------FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSA--ITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG 129 + ++L+LGL LSC+ GA + L+ FDVT+ GA+A+ NNA+AF +TW AC SG PAK++IP GTFLTGPVVF GPCKS I EV+G VKAT+DL EY+ G WILFE IDGL L GGG Sbjct: 3 IAGSILILGLALLSCVADGALRRHIGLNHRRGLIDGGGAEVTVFDVTQHGAKADDQTNNAEAFIQTWRAACDSGVPAKLVIPVGTFLTGPVVFQGPCKSTEPIVFEVQGNVKATSDLSEYSSGQWILFEIIDGLTLNGGG 142
BLAST of CMJ_chr5_007360.1 vs. ExPASy TrEMBL
Match: A0A6N2N216|A0A6N2N216_SALVM (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS440573 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.758e-36 Identity = 74/140 (52.86%), Postives = 91/140 (65.00%), Query Frame = 0 Query: 8 VVKAVLLLGLTFLSCMVQGA-EPNYSLD---------------FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSA--ITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG 129 + ++L+LGL LSC+ GA + L+ FDVT+ GA+A+ NNA+AF +TW AC SG PAK++IP GTFLTGPVVF GPCKS I EV+G VKAT+DL EY+ G WILFE IDGL L GGG Sbjct: 3 IAGSILILGLALLSCVADGALRRHIGLNHRRGLIDGGGAEVTVFDVTQHGAKADDQTNNAEAFIQTWRAACDSGVPAKLVIPVGTFLTGPVVFQGPCKSTEPIVFEVQGNVKATSDLSEYSSGQWILFEIIDGLTLNGGG 142
BLAST of CMJ_chr5_007360.1 vs. ExPASy TrEMBL
Match: A0A6A6MRI2|A0A6A6MRI2_HEVBR (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_037640 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 6.400e-36 Identity = 72/152 (47.37%), Postives = 92/152 (60.53%), Query Frame = 0 Query: 1 MARQERFVVKAVLLLGLTFLSCMVQGA-----------------------EPNYSLDFDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG 129 MA RF VKA+L+LGLT SC+ GA P+ FDVT+FGA+A+ +NA +F + W C SG+PAKV+IP GTF+ GP VF GPCK+ +T+EV+G+VKATTDL +Y +WI FE IDGL L G G Sbjct: 1 MAITGRFEVKAILVLGLTLFSCVANGAASQRRSLIDRRSLTDTNAAAPSSSPSGGTVFDVTQFGAKADDKTDNALSFIKAWRAGCDSGSPAKVVIPQGTFVAGPTVFQGPCKAPMTMEVQGVVKATTDLSQYTSPEWISFEIIDGLTLNGKG 152
BLAST of CMJ_chr5_007360.1 vs. ExPASy TrEMBL
Match: B9GSC9|B9GSC9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G202100 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.859e-35 Identity = 74/140 (52.86%), Postives = 91/140 (65.00%), Query Frame = 0 Query: 8 VVKAVLLLGLTFLSCMVQGAEPNYS--------LD--------FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSA--ITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG 129 + ++L+LGL LSC+ GA ++ +D FDVTK GA+A+ +NA+AF +TW AC SGAPAK++IP GTFLT PVVF GPCKS I EV+G VKATTDL EY+ WILFE IDGL L GGG Sbjct: 3 IAGSILVLGLALLSCVADGALRHHIGLSDRRSLIDGSGAAVTVFDVTKHGAKADDKTDNAEAFIQTWRAACDSGAPAKMVIPGGTFLTSPVVFQGPCKSTEPIVFEVQGNVKATTDLSEYSSEQWILFEIIDGLTLNGGG 142
BLAST of CMJ_chr5_007360.1 vs. ExPASy TrEMBL
Match: B9GSC8|B9GSC8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G202200 PE=3 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 5.123e-35 Identity = 75/140 (53.57%), Postives = 91/140 (65.00%), Query Frame = 0 Query: 8 VVKAVLLLGLTFLSCMVQGAEPNY-------SLD---------FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSA--ITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG 129 + ++L+LGL LSC+ GA ++ SL FDVTK GA+A+ +NA+AF +TW AC SGAPAK++IP GTFLT PVVF GPCKS I EV+G VKATTDL EY+ WILFE IDGL L GGG Sbjct: 3 IAGSILVLGLALLSCVADGALRHHIGLSDRRSLVDGSGAAVTVFDVTKHGAKADDKTDNAEAFIQTWRAACDSGAPAKMVIPGGTFLTSPVVFQGPCKSTEPIVFEVQGNVKATTDLSEYSSEQWILFEIIDGLTLNGGG 142
BLAST of CMJ_chr5_007360.1 vs. ExPASy TrEMBL
Match: B9SAU8|B9SAU8_RICCO (Galacturan 1,4-alpha-galacturonidase, putative OS=Ricinus communis OX=3988 GN=RCOM_1179110 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.020e-34 Identity = 69/142 (48.59%), Postives = 87/142 (61.27%), Query Frame = 0 Query: 1 MARQERFVVKAV-LLLGLTFLSCMVQGAEPNYSLD-----------FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGGV 130 MA RF VKA+ ++LGL SC+ G + D FDVT+FGA+A+ +NA AF + W +AC S PAKVLIP G F+ GP VF GPC+S +T E+ GIVKATTDL +Y+ +WI FE I GL L G G Sbjct: 1 MAITCRFEVKAIHVVLGLALFSCLANGVALRHRRDLVEDTGGSLTVFDVTQFGAKADDKTDNAIAFIKAWKEACNSKTPAKVLIPKGNFVMGPAVFQGPCQSKVTFELLGIVKATTDLSDYSSPEWISFERITGLTLKGDGT 142
BLAST of CMJ_chr5_007360.1 vs. ExPASy TrEMBL
Match: A0A4V5ZXC4|A0A4V5ZXC4_POPAL (Exopolygalacturonase clone GBGE184 family protein OS=Populus alba OX=43335 GN=D5086_0000325020 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.437e-34 Identity = 72/141 (51.06%), Postives = 89/141 (63.12%), Query Frame = 0 Query: 8 VVKAVLLLGLTFLSCMVQGAEPNYSLD-----------------FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSA--ITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG 129 + ++L+LGL LSC+ GA P + + FDVTK GA+A+ +NA+AF +TW AC SG PAK++IP GTF+T PVVF GPCKS I EV+G VKATTDL EY+ WILFE IDGL L GGG Sbjct: 3 IAGSILVLGLALLSCVADGA-PRHHIGLSHRRSLVDGSGAAVTVFDVTKHGAKADDKTDNAEAFIQTWRAACDSGVPAKMVIPGGTFVTSPVVFQGPCKSTEPIVFEVQGNVKATTDLSEYSSEQWILFEIIDGLTLNGGG 142
BLAST of CMJ_chr5_007360.1 vs. ExPASy TrEMBL
Match: A0A4U5LSW6|A0A4U5LSW6_POPAL (Exopolygalacturonase clone GBGE184 family protein OS=Populus alba OX=43335 GN=D5086_0000325010 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.452e-34 Identity = 72/141 (51.06%), Postives = 89/141 (63.12%), Query Frame = 0 Query: 8 VVKAVLLLGLTFLSCMVQGAEPNYSLD-----------------FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSA--ITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG 129 + ++L+LGL LSC+ GA P + + FDVTK GA+A+ +NA+AF +TW AC SG PAK++IP GTF+T PVVF GPCKS I EV+G VKATTDL EY+ WILFE IDGL L GGG Sbjct: 3 IAGSILVLGLALLSCVADGA-PRHHIGLSHRRSLVDGSGAAVTVFDVTKHGAKADDKTDNAEAFIQTWRAACDSGVPAKMVIPGGTFVTSPVVFQGPCKSTEPIVFEVQGNVKATTDLSEYSSEQWILFEIIDGLTLNGGG 142
BLAST of CMJ_chr5_007360.1 vs. ExPASy Swiss-Prot
Match: PGLR1_ARATH (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.343e-28 Identity = 59/139 (42.45%), Postives = 80/139 (57.55%), Query Frame = 0 Query: 1 MARQERFVVKAVLLLGLTFLSCMVQG----------AEPNYSLDFDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG 129 +A+ V +++L+ L F SC+ G A +D+TKFGA +G N +AF TW + C S PA +L+P GTFL GPV+F+GPCKS +TV V G + ATT YA +W LFE +D L+LTG G Sbjct: 8 VAKANNINVGSLILMALVFGSCVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT--SGYATPEWFLFERVDNLVLTGTG 144
BLAST of CMJ_chr5_007360.1 vs. ExPASy Swiss-Prot
Match: PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.371e-24 Identity = 46/96 (47.92%), Postives = 62/96 (64.58%), Query Frame = 0 Query: 35 FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYAD-GDWILFENIDGLLLTGGG 129 FD+TK GA NG ++ +A E WA ACG +LIP G FL GP+ F+GPCK +T++V G + ATTDL +Y D G+WI +D L++TG G Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKG 136
BLAST of CMJ_chr5_007360.1 vs. ExPASy Swiss-Prot
Match: PGLR1_MAIZE (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.038e-23 Identity = 54/130 (41.54%), Postives = 74/130 (56.92%), Query Frame = 0 Query: 11 AVLLLGLTFLSCMVQG-AEPNYSLD---------FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYAD-GDWILFENIDGLLLTGGG 129 A+ L L L C+V G E + +D FD+TK GA NG ++ +A E WA ACG +LIP G FL G + F+GPCK +T++V G + ATTDL +Y D G+WI +D L++TG G Sbjct: 7 AMRALFLLVLFCIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITGKG 136
BLAST of CMJ_chr5_007360.1 vs. ExPASy Swiss-Prot
Match: PGLR2_MAIZE (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.022e-22 Identity = 53/130 (40.77%), Postives = 74/130 (56.92%), Query Frame = 0 Query: 11 AVLLLGLTFLSCMVQG-AEPNYSLD---------FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYAD-GDWILFENIDGLLLTGGG 129 A+ L L L C+V G E + +D FD+TK GA NG ++ +A E WA ACG +LIP G FL G + F+GPCK +T++V G + ATTDL +Y + G+WI +D L++TG G Sbjct: 7 AMRALFLLVLFCIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKEHGNWIEILRVDNLVITGKG 136
BLAST of CMJ_chr5_007360.1 vs. ExPASy Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.729e-18 Identity = 44/124 (35.48%), Postives = 72/124 (58.06%), Query Frame = 0 Query: 8 VVKAVLLLGLTFLSCMVQGAEPNYSLDFDVT-KFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGGV 130 +V ++ +L L F+S A S FDV KFGA+A+G + ++ F + W +AC S P+ V+IP GT+L V GPCK+ I + V+G ++A D + D +W+ F +++ + GGG+ Sbjct: 7 IVPSMFVLLLLFIS-----ASKVQSDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGI 125
BLAST of CMJ_chr5_007360.1 vs. ExPASy Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.871e-18 Identity = 43/124 (34.68%), Postives = 73/124 (58.87%), Query Frame = 0 Query: 8 VVKAVLLLGLTFLSCMVQGAEPNYSLDFDVT-KFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGGV 130 +V ++ +L L F+S +P+ FDV KFGA+A+G + ++ F + W +AC S P+ V+IP GT+L V GPCK+ I + V+G ++A D + D +W+ F +++ + GGG+ Sbjct: 7 IVPSMFVLLLLFIS--ASKVQPDA---FDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGI 125
BLAST of CMJ_chr5_007360.1 vs. ExPASy Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.059e-18 Identity = 39/98 (39.80%), Postives = 62/98 (63.27%), Query Frame = 0 Query: 33 LDFDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCK-SAITVEVRGIVKATTDLKEYAD-GDWILFENIDGLLLTGG 128 L ++V GA+A+G ++ +AF WAKAC S P + +P+GTF VVFSGPCK +AIT + G + A +D + + +WI F +++G+ ++GG Sbjct: 26 LTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGG 123
BLAST of CMJ_chr5_007360.1 vs. ExPASy Swiss-Prot
Match: PGLR_MALDO (Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.564e-17 Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 0 Query: 35 FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGD-WILFENIDGLLLTGGG 129 V FGA+ NG ++ QAF + W AC S +++P +L P+ FSGPCKS +T+++ G ++A+ D Y D D W++F+N+ LL+ G G Sbjct: 99 ISVDDFGAKGNG-ADDTQAFVKAWKAACSSSGAMVLVVPQKNYLVRPIEFSGPCKSQLTLQIYGTIEASEDRSIYKDIDHWLIFDNVQNLLVVGPG 193
BLAST of CMJ_chr5_007360.1 vs. ExPASy Swiss-Prot
Match: PGLR_ACTDE (Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.685e-16 Identity = 36/96 (37.50%), Postives = 63/96 (65.62%), Query Frame = 0 Query: 36 DVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEY-ADG-DWILFENIDGLLLTGGG 129 +V FGA+ +G +++ +AF + W AC S + A +L+P +L P+ FSGPCKS +T+++ G ++A+ D +Y DG W++F+++ L + GGG Sbjct: 91 NVDDFGAKGDG-RDDTKAFEKAWKAACSSTSSAVLLVPKKNYLVRPISFSGPCKSGLTMQIYGTIEASDDRSDYRKDGRHWLVFDSVQNLRVEGGG 185
BLAST of CMJ_chr5_007360.1 vs. ExPASy Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.806e-16 Identity = 33/96 (34.38%), Postives = 58/96 (60.42%), Query Frame = 0 Query: 35 FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGGV 130 FD+TK+GA +N D ++A + +AC S +P+ ++IP GTF V GPCKS + ++++ +KA +D + G+W+ +D ++GGG+ Sbjct: 27 FDITKYGANSNADI--SEALLNAFKEACQSTSPSTIVIPKGTFTMNQVKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGI 120
BLAST of CMJ_chr5_007360.1 vs. Araport11
Match: AT1G02790.1 (| polygalacturonase 4 | Chr1:610681-612225 REVERSE LENGTH=422 | 201606) HSP 1 Score: 111.309 bits (277), Expect = 6.489e-29 Identity = 59/139 (42.45%), Postives = 80/139 (57.55%), Query Frame = 0 Query: 1 MARQERFVVKAVLLLGLTFLSCMVQG----------AEPNYSLDFDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGG 129 +A+ V +++L+ L F SC+ G A +D+TKFGA +G N +AF TW + C S PA +L+P GTFL GPV+F+GPCKS +TV V G + ATT YA +W LFE +D L+LTG G Sbjct: 8 VAKANNINVGSLILMALVFGSCVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATT--SGYATPEWFLFERVDNLVLTGTG 144
BLAST of CMJ_chr5_007360.1 vs. Araport11
Match: AT1G05650.1 (| Pectin lyase-like superfamily protein | Chr1:1690264-1692126 REVERSE LENGTH=394 | 201606) HSP 1 Score: 88.1965 bits (217), Expect = 1.396e-20 Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 0 Query: 8 VVKAVLLLGLTFLSCMVQGAEPNYSLDFDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYAD-GDWILFENIDGLLLTGG 128 + K+ + L F + S+ F+V FGA+ +G ++ AF + W ACGS A A V++P+GTFL + F GPCKS IT +V G V A D + + + G WILF ++ L GG Sbjct: 1 MTKSAITFPLIFTLLTFIDVSSSASIVFNVVSFGAKPDGVTDSTAAFLKAWQGACGSAASATVVVPTGTFLLKVITFGGPCKSKITFQVTGTVVAPEDYRTFGNSGSWILFNKVNRFSLVGG 122
BLAST of CMJ_chr5_007360.1 vs. Araport11
Match: AT4G18180.1 (| Pectin lyase-like superfamily protein | Chr4:10065614-10067317 FORWARD LENGTH=422 | 201606) HSP 1 Score: 87.8113 bits (216), Expect = 2.025e-20 Identity = 47/99 (47.47%), Postives = 63/99 (63.64%), Query Frame = 0 Query: 36 DVTKFGAEANGDKNNAQAFTETWAKACGSGAPA-KVLIPSGTFLTGPVVFSGPCK--SAITVEVRGIVKATTDLKEY-ADGDWILFENIDGLLLTGGGV 130 DV FGA AN +++ +AF W KAC S + + ++IP G F G + FSGPC S +TV V+G +KA+TDL +Y + G WI F I+GL LTGGG Sbjct: 40 DVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPCTNVSNLTVRVKGHLKASTDLSKYRSGGGWIQFGWINGLTLTGGGT 138
BLAST of CMJ_chr5_007360.1 vs. Araport11
Match: AT2G33160.1 (| glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | Chr2:14053404-14056246 FORWARD LENGTH=664 | 201606) HSP 1 Score: 88.1965 bits (217), Expect = 2.433e-20 Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 0 Query: 35 FDVTKFGAEANGDKNNAQAFTETWAKACG-SGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGGV 130 FDV +GA A+ ++NA AFT+ W +AC S + V IPSG F V FSGPCKS+IT +RG + A + +WILF+ +D L +TGGG+ Sbjct: 32 FDVRNYGARADSQRDNAFAFTKAWNEACQWSYGRSTVYIPSGIFYLRQVTFSGPCKSSITFFIRGTLLAPRNPYAINQEEWILFKYVDNLTVTGGGL 128
BLAST of CMJ_chr5_007360.1 vs. Araport11
Match: AT1G78400.1 (| Pectin lyase-like superfamily protein | Chr1:29498281-29499682 REVERSE LENGTH=404 | 201606) HSP 1 Score: 84.7297 bits (208), Expect = 2.799e-19 Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 0 Query: 35 FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENIDGLLLTGGGV 130 FDV +GA +G +N AFT+ W AC +V IP GTF G V F+GPCKS I+ ++G + A D WI+F +D L ++GGG+ Sbjct: 35 FDVRSYGARGDGKTDNTMAFTKAWKDACQWKGLPRVYIPFGTFYLGAVAFTGPCKSRISFIIKGTLLAPKDPNAIKQDSWIIFRYVDYLTVSGGGI 130
BLAST of CMJ_chr5_007360.1 vs. Araport11
Match: AT2G43890.1 (| Pectin lyase-like superfamily protein | Chr2:18176924-18178390 FORWARD LENGTH=392 | 201606) HSP 1 Score: 81.2629 bits (199), Expect = 4.389e-18 Identity = 44/131 (33.59%), Postives = 71/131 (54.20%), Query Frame = 0 Query: 11 AVLLLGLTFLSCMVQGAEPNYSLDFDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYAD-GDWILFENIDGLLLTGGGVNLNCSSVVPC 140 AVLL+ F S + + +++V FGA+ +G ++ +AF W AC S A V +P G+FL PV F GPC+S IT ++ G + A +D + + G WILF ++ + + GG ++ +S C Sbjct: 8 AVLLM---FFSSFLLMKSSTAASNYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAAAVTVTVPRGSFLLKPVEFRGPCRSRITFQIYGTIVAPSDYRGLGNSGYWILFVKVNRISIIGGTLDARGASFWAC 135
BLAST of CMJ_chr5_007360.1 vs. Araport11
Match: AT1G05660.1 (| Pectin lyase-like superfamily protein | Chr1:1694286-1696058 REVERSE LENGTH=394 | 201606) HSP 1 Score: 80.4925 bits (197), Expect = 6.638e-18 Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 0 Query: 8 VVKAVLLLGLTFLSCMVQGAEPNYSLDFDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYAD-GDWILFENIDGLLLTGG 128 + K+V+ L F + S F+V FGA+ +G ++ AF + W AC S + A V++P GTFL + F GPCKS IT +V G V A D + + + G WILF ++ L GG Sbjct: 1 MTKSVIRFSLLFTLLTFIDVSISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVPKGTFLLKVITFGGPCKSKITFQVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVGG 122
BLAST of CMJ_chr5_007360.1 vs. Araport11
Match: AT2G41850.1 (| polygalacturonase ADPG2-like protein | Chr2:17461918-17464059 REVERSE LENGTH=433 | 201606) HSP 1 Score: 74.7146 bits (182), Expect = 1.032e-15 Identity = 34/94 (36.17%), Postives = 55/94 (58.51%), Query Frame = 0 Query: 37 VTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSG-TFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYAD-GDWILFENIDGLLLTGG 128 V+ FGA+ +G ++ QAF W KAC S +L+P G T+L + +GPC S +TV++ G + A+ +Y D WI+F+ ++ L + GG Sbjct: 70 VSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLTGPCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDGG 163
BLAST of CMJ_chr5_007360.1 vs. Araport11
Match: AT3G59850.2 (| Pectin lyase-like superfamily protein | Chr3:22109343-22111698 REVERSE LENGTH=432 | 201606) HSP 1 Score: 73.559 bits (179), Expect = 2.126e-15 Identity = 36/109 (33.03%), Postives = 66/109 (60.55%), Query Frame = 0 Query: 35 FDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSG-PCK-SAITVEVRGIVKATTDLKEYADGD-WILFENIDGLLLTGGGVNLNCSSVVPC 140 +++ +GA+ +G ++ +AFT WAKAC S P +L+P G FL ++F G CK ++T ++G + A +D + + WILF+++DG+ + GG ++ +S+ C Sbjct: 67 YNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVPKGRFLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVLDAQGASLWSC 175
BLAST of CMJ_chr5_007360.1 vs. Araport11
Match: AT1G60590.1 (| Pectin lyase-like superfamily protein | Chr1:22314426-22316867 REVERSE LENGTH=540 | 201606) HSP 1 Score: 73.559 bits (179), Expect = 2.742e-15 Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 0 Query: 32 SLDFDVTKFGAEANGDKNNAQAFTETWAKACGSGAPAKVLIPSGTFLTGPVVFSGP-CKSAITVEVRGIVKATTDLKEYADG--DWILFENIDGLLLTGGGV 130 S F+V FGA+ +G ++ QAF WA AC A ++ P FL GP+ FSGP C++ I ++ G++ A TD + + G WI F + G+ + G GV Sbjct: 120 SQQFNVLDFGAKGDGMSDDTQAFEAAWASACKVEASTMIIPPDYIFLVGPISFSGPYCQANIVFQLEGMIVAPTDTESWGGGLMWWIEFTKLSGITIQGNGV 221 The following BLAST results are available for this feature:
BLAST of CMJ_chr5_007360.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr5_007360.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr5_007360.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr5_007360.1_cmj_v1 ID=CMJ_chr5_007360.1_cmj_v1; Name=CMJ_chr5_007360.1; organism=Citrus maxima; type=mRNA; length=561bpback to top protein sequence of CMJ_chr5_007360.1_cmj_v1 >CMJ_chr5_007360.1_cmj_v1 ID=CMJ_chr5_007360.1_cmj_v1; Name=CMJ_chr5_007360.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=187bpback to top mRNA from alignment at chr5:4829220..4831038- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1819bp; location=Sequence derived from: chr5:4829220..4831038- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr5:4829220..4831038- >CMJ_chr5_007360.1_cmj_v1 ID=CMJ_chr5_007360.1_cmj_v1; Name=CMJ_chr5_007360.1; organism=Citrus maxima; type=CDS; length=561bp; location=Sequence derived from: chr5:4829220..4831038- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|