CMJ_chr6_005260.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr6_005260.1 vs. ExPASy TrEMBL
Match: A0A2H5QTA4|A0A2H5QTA4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_259560 PE=4 SV=1) HSP 1 Score: 449.899 bits (1156), Expect = 9.622e-157 Identity = 230/235 (97.87%), Postives = 234/235 (99.57%), Query Frame = 0 Query: 99 LRATIMYPRSASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEGAQALLDEKAEKCSSSKKKEAKKPIMDQQLRERQEMDKKLRKLAKTLNYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKESIGFQEAKSVRARSKTTAQKTNSLGEAGSEPGTAAPSQN 333 ++A+IMYPRSASKV EMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEGAQALLDEKAEKCSSSKKKEAKKPIMDQQLRERQEMDKKLRKLAKTL+YLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKESIGFQEAKSVRARSKTTAQKTNSLGEAGSEPGTAAPSQN Sbjct: 51 IQASIMYPRSASKVREMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEGAQALLDEKAEKCSSSKKKEAKKPIMDQQLRERQEMDKKLRKLAKTLDYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKESIGFQEAKSVRARSKTTAQKTNSLGEAGSEPGTAAPSQN 285
BLAST of CMJ_chr6_005260.1 vs. ExPASy TrEMBL
Match: A0A067DQJ8|A0A067DQJ8_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g038326mg PE=4 SV=1) HSP 1 Score: 443.736 bits (1140), Expect = 2.823e-155 Identity = 227/230 (98.70%), Postives = 228/230 (99.13%), Query Frame = 0 Query: 104 MYPRSASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEGAQALLDEKAEKCSSSKKKEAKKPIMDQQLRERQEMDKKLRKLAKTLNYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKESIGFQEAKSVRARSKTTAQKTNSLGEAGSEPGTAAPSQN 333 MYPRSASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEGAQALLDE+AEKCSSSKKKEAKKPIMDQQLRERQEMDKKLRKLAKTLNYLERA REEAIPLIEAAFQQRLEEERVLHE EQQQEVELSRERHDEDLKESIGFQEAKSVRARSKTTAQKTNSLGEAGSEPGTAAPSQN Sbjct: 1 MYPRSASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEGAQALLDEEAEKCSSSKKKEAKKPIMDQQLRERQEMDKKLRKLAKTLNYLERANREEAIPLIEAAFQQRLEEERVLHEIEQQQEVELSRERHDEDLKESIGFQEAKSVRARSKTTAQKTNSLGEAGSEPGTAAPSQN 230
BLAST of CMJ_chr6_005260.1 vs. ExPASy TrEMBL
Match: V4SXU6|V4SXU6_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013452mg PE=4 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 5.327e-113 Identity = 193/206 (93.69%), Postives = 196/206 (95.15%), Query Frame = 0 Query: 104 MYPRSASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEGAQALLDEKAEKCSSSKKKEAKKPIMDQQLRERQEMDKKLRKLAKTLNYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKESIGFQEAKSVRARSK 309 MYPRSASKV EMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEGAQALLDE+AEKCSSSKKKEAKKPIMDQQLRERQEMDKKLRKL KTL+YLERAKREEAIPLIEAAFQQRLEEERVLHE EQQQEVELSR+RHDEDLKESIGFQ R SK Sbjct: 1 MYPRSASKVREMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEGAQALLDEEAEKCSSSKKKEAKKPIMDQQLRERQEMDKKLRKLVKTLDYLERAKREEAIPLIEAAFQQRLEEERVLHEIEQQQEVELSRQRHDEDLKESIGFQGCWRKRTYSK 206
BLAST of CMJ_chr6_005260.1 vs. ExPASy TrEMBL
Match: A0A5C7I9Y0|A0A5C7I9Y0_9ROSI (Eukaryotic translation initiation factor 3 subunit A OS=Acer yangbiense OX=1000413 GN=EZV62_006471 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.450e-53 Identity = 134/214 (62.62%), Postives = 164/214 (76.64%), Query Frame = 0 Query: 99 LRATIMYPRS-ASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEG----AQALLDEKAEKCSSSK---------KKEAKKPIMD----QQLRERQEMDKKLRKLAKTLNYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKE 294 +RA I P + SK+GEML GLGE+VDKEH+RL+ARKSIIEK K EEH+RQLIEME EEES+R+ +Q+K EEAEQKRLA+E+E RKNQRIL E AQA+L+E AEK S K +K K+ +M+ +QLRERQEM+KKL+KLAKT++YLERAKREEA PLI+AAFQ+RL EE+VLHE EQQQE+ELSR+ HD DL+E Sbjct: 532 VRAMIYPPANKVSKLGEML-PGLGEIVDKEHKRLLARKSIIEKRK-EEHERQLIEMEREEESKRL--KQQKITEEAEQKRLASEYEQRKNQRILREIEERELEEAQAMLEE-AEKRSKKKGGKKPILEGEKVTKQTLMERALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIDAAFQRRLVEEKVLHEREQQQEIELSRQCHDGDLRE 740
BLAST of CMJ_chr6_005260.1 vs. ExPASy TrEMBL
Match: A0A067GPW0|A0A067GPW0_CITSI (Eukaryotic translation initiation factor 3 subunit A OS=Citrus sinensis OX=2711 GN=CISIN_1g003396mg PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.723e-51 Identity = 142/214 (66.36%), Postives = 165/214 (77.10%), Query Frame = 0 Query: 99 LRATIMYPRS-ASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEG----AQALLDEKAEKCSSSK---------KKEAKKPIMD----QQLRERQEMDKKLRKLAKTLNYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKE 294 +RA I P + ASK+GEML AGLGE+VDKEH+RL+ARKSIIEK K EEH+RQLIEME EE R L+QQK T EEAEQKRLAAEFE RKNQRIL E AQALL+E AEK + K +K K+ +M+ +QLRERQEM+KKL+KLAKT++YLERAKREEA PLI+AAFQQRLEEE+VLHE EQQ EVELSR+RHD DL+E Sbjct: 532 VRALIYPPANKASKLGEML-AGLGEIVDKEHKRLLARKSIIEKRK-EEHERQLIEME-REEESRRLKQQKIT-EEAEQKRLAAEFEHRKNQRILREIEERELEEAQALLEE-AEKRNKKKGGKKPILEGEKVTKQTLMERALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIDAAFQQRLEEEKVLHEREQQLEVELSRQRHDGDLRE 740
BLAST of CMJ_chr6_005260.1 vs. ExPASy TrEMBL
Match: V4T0V5|V4T0V5_CITCL (Eukaryotic translation initiation factor 3 subunit A OS=Citrus clementina OX=85681 GN=CICLE_v10000154mg PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 6.194e-51 Identity = 142/214 (66.36%), Postives = 165/214 (77.10%), Query Frame = 0 Query: 99 LRATIMYPRS-ASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEG----AQALLDEKAEKCSSSK---------KKEAKKPIMD----QQLRERQEMDKKLRKLAKTLNYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKE 294 +RA I P + ASK+GEML AGLGE+VDKEH+RL+ARKSIIEK K EEH+RQLIEME EE R L+QQK T EEAEQKRLAAEFE RKNQRIL E AQALL+E AEK + K +K K+ +M+ +QLRERQEM+KKL+KLAKT++YLERAKREEA PLI+AAFQQRLEEE+VLHE EQQ EVELSR+RHD DL+E Sbjct: 532 VRALIYPPANKASKLGEML-AGLGEIVDKEHKRLLARKSIIEKRK-EEHERQLIEME-REEESRRLKQQKIT-EEAEQKRLAAEFEHRKNQRILREIEERELEEAQALLEE-AEKRNKKKGGKKPILEGEKVTKQTLMERALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIDAAFQQRLEEEKVLHEREQQLEVELSRQRHDGDLRE 740
BLAST of CMJ_chr6_005260.1 vs. ExPASy TrEMBL
Match: A0A0D2R9N9|A0A0D2R9N9_GOSRA (Eukaryotic translation initiation factor 3 subunit A OS=Gossypium raimondii OX=29730 GN=B456_004G238100 PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 9.428e-51 Identity = 124/200 (62.00%), Postives = 152/200 (76.00%), Query Frame = 0 Query: 100 RATIM-YPRSASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRI----LLIQLEGAQALLDEKAEKCSSSKKKEAKKPIMDQQLRERQEMDKKLRKLAKTLNYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKE 294 RA I P+ ASK+GE+L GLGE+VDKEH+RL+ARKSIIEK K EE +RQL+EME EEES+R + K EEAE+KRLAA FE ++ +RI +LE AQALL E + KKK PI+D QL+ERQE +K+L+K+AKT+++LERAKREEA PLIEAAFQ+RL EE+VLHE EQQ EVELSR+RHD DLKE Sbjct: 533 RAMIYPTPKKASKLGEVL-PGLGEIVDKEHKRLLARKSIIEKRK-EEQERQLLEMEREEESKR--QNLLKKTEEAEKKRLAAMFEQQRAERIRKEIEERELEEAQALLQETEKHLKRGKKK----PILDGQLKERQEQEKRLQKVAKTMDHLERAKREEAAPLIEAAFQRRLVEEKVLHEREQQLEVELSRQRHDGDLKE 724
BLAST of CMJ_chr6_005260.1 vs. ExPASy TrEMBL
Match: A0A2H5PQ10|A0A2H5PQ10_CITUN (Eukaryotic translation initiation factor 3 subunit A OS=Citrus unshiu OX=55188 GN=CUMW_156550 PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.593e-50 Identity = 141/214 (65.89%), Postives = 164/214 (76.64%), Query Frame = 0 Query: 99 LRATIMYPRS-ASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEG----AQALLDEKAEKCSSSK---------KKEAKKPIMD----QQLRERQEMDKKLRKLAKTLNYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKE 294 +RA I P + ASK+G+ML AGLGE+VDKEH+RL+ARKSIIEK K EEH+RQLIEME EE R L+QQK T EEAEQKRL AEFE RKNQRIL E AQALL+E AEK S K +K K+ +M+ +QLRERQEM+KKL+KLAKT++YLERAKREEA PLI+AAFQQRLEEE+VLHE EQQ EVELSR+RHD DL+E Sbjct: 532 VRAMIYPPANKASKLGDML-AGLGEIVDKEHKRLLARKSIIEKRK-EEHERQLIEME-REEESRRLKQQKIT-EEAEQKRLVAEFEHRKNQRILREIEERELEEAQALLEE-AEKRSKKKGGKKPILEGEKVTKQTLMERALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIDAAFQQRLEEEKVLHEREQQLEVELSRQRHDGDLRE 740
BLAST of CMJ_chr6_005260.1 vs. ExPASy TrEMBL
Match: A0A1R3GDR0|A0A1R3GDR0_9ROSI (Eukaryotic translation initiation factor 3 subunit A OS=Corchorus olitorius OX=93759 GN=COLO4_35714 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 2.563e-50 Identity = 129/214 (60.28%), Postives = 156/214 (72.90%), Query Frame = 0 Query: 100 RATIMYP-RSASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRI----LLIQLEGAQALLDEKAEKCSSSK--------KKEAKKPIMD----QQLRERQEMDKKLRKLAKTLNYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKESI 296 RA I P ASK+ E+L GLGEVVDKEH+RL+ARKSIIEK K EE +RQL+EME EEES+R+ Q K EEAEQKRLAAEFE R+ +RI +LE AQALL+E ++ +K K+ +M+ +QL+ERQEM+KKL+KL KT++YLERAKREEA PLIEAAFQQRL EE++LHE EQQ EVELSR+RHD DLKE I Sbjct: 486 RAMIYPPLEKASKLAEIL-PGLGEVVDKEHKRLLARKSIIEKRK-EEQERQLLEMEREEESKRLKLQ--KITEEAEQKRLAAEFEQRRAERIRQEIEERELEEAQALLEETEKRLRKGGKKKPVLEGEKLTKQVLMERALTEQLKERQEMEKKLQKLGKTMDYLERAKREEAAPLIEAAFQQRLVEEKLLHEREQQMEVELSRQRHDGDLKEKI 695
BLAST of CMJ_chr6_005260.1 vs. ExPASy TrEMBL
Match: A0A5B6YHL3|A0A5B6YHL3_DAVIN (Eukaryotic translation initiation factor 3 subunit A OS=Davidia involucrata OX=16924 GN=Din_000496 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 3.041e-50 Identity = 128/211 (60.66%), Postives = 157/211 (74.41%), Query Frame = 0 Query: 100 RATIMYP-RSASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEG----AQALLDEKAEKCSSSK-------KKEAKKPIMD----QQLRERQEMDKKLRKLAKTLNYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKE 294 RATI P + ASK+ E+L GL E+VDKEH+RL+ARKSIIEK K EE +RQL+EME EEES+R+ Q K EEAEQKRLA+E+E RKNQRIL E AQALL E ++ +K K+ +M+ +QLRER EM+KKL+KLAKT++YLERAKREEA PLI+AAFQQR+ EE+VLHE+EQQQE+ELSR+RHD DLKE Sbjct: 533 RATIYPPEKKASKLAEILP-GLAEIVDKEHKRLLARKSIIEKRK-EEQERQLLEMEREEESKRLKLQ--KITEEAEQKRLASEYEQRKNQRILREIEERELEEAQALLQEAEKRSKKKGKKPILEGEKVTKQTLMELALSEQLRERHEMEKKLQKLAKTMDYLERAKREEAAPLIDAAFQQRVVEEKVLHEHEQQQEIELSRQRHDGDLKE 739
BLAST of CMJ_chr6_005260.1 vs. ExPASy Swiss-Prot
Match: EIF3A_TOBAC (Eukaryotic translation initiation factor 3 subunit A OS=Nicotiana tabacum OX=4097 GN=TIF3A1 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.180e-51 Identity = 125/210 (59.52%), Postives = 155/210 (73.81%), Query Frame = 0 Query: 102 TIMYP--RSASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILL----IQLEGAQALLDEKAEKCSSSKKKEA-------KKPIM----DQQLRERQEMDKKLRKLAKTLNYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKE 294 T++YP + A+K+GE LS L E+V+KEH+RL+ARKSIIEK K EE +R L+EME EE++R R +K EEAEQKR+AAE+E R+NQRIL +LE AQALL E AEK S KKK KK IM ++QLRERQEM+KKL K AK++++LERAKREEA PLIE+AF+QRL EE LHE EQQQE+ELSR+RH DL+E Sbjct: 534 TMIYPPAKKAAKLGEALS-NLAEIVEKEHKRLLARKSIIEKRK-EEQERLLLEMERVEETKR--RDVQKMTEEAEQKRIAAEYEQRRNQRILKEIEDRELEEAQALLHE-AEKRSKRKKKPVLEGEKMTKKVIMELALNEQLRERQEMEKKLLKFAKSMDHLERAKREEAAPLIESAFKQRLAEEAALHEREQQQEIELSRQRHAGDLEE 738
BLAST of CMJ_chr6_005260.1 vs. ExPASy Swiss-Prot
Match: EIF3A_ARATH (Eukaryotic translation initiation factor 3 subunit A OS=Arabidopsis thaliana OX=3702 GN=TIF3A1 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.391e-43 Identity = 113/207 (54.59%), Postives = 144/207 (69.57%), Query Frame = 0 Query: 106 PRSASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRIL----LIQLEGAQALLDEK--------------AEKCSSSKKKEAKKPIMDQQLRERQEMDKKLRKLAKTLNYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKE 294 P ASK+ ++ L + V+KEH+RL+ARKSIIEK K E+ +RQ +EME EEE +R+ Q K EEAEQKRLAAE R+ QRIL +LE AQALL+E EK + K+ K+ + +QL+ERQEM+KKL+KLAKT++YLERAKREEA PLIEAA+Q+RL EER +E EQQ+EVELS+ERH+ DLKE Sbjct: 540 PSKASKLAGVI-PNLADTVEKEHKRLLARKSIIEKRK-EDQERQQLEMEREEEQKRLKLQ--KLTEEAEQKRLAAELAERRKQRILREIEEKELEEAQALLEETEKRMKKGKKKPLLDGEKVT---KQSVKERALTEQLKERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQRRLVEEREFYEREQQREVELSKERHESDLKE 739
BLAST of CMJ_chr6_005260.1 vs. ExPASy Swiss-Prot
Match: EIF3A_MAIZE (Eukaryotic translation initiation factor 3 subunit A OS=Zea mays OX=4577 GN=TIF3A1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.371e-29 Identity = 99/207 (47.83%), Postives = 133/207 (64.25%), Query Frame = 0 Query: 100 RATIMYP-RSASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRILLIQLEGAQALLDEKAEKCSSSKKKEA-------KKPIM----DQQLRERQEMDKKLRKLAKTLNYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKE 294 R I P + SK+GE L L +V+ EH+RL+ARKSIIEK K EE +RQ++E E EEE +RM QKKT +E E+ RL E R+ RI E +A + E + + KK K+ M ++QL+ER EM+KKL+K AKT++YLERAKR+E PLIE AFQ+RLEEE++LHE EQ +E+ELS++ H DL+E Sbjct: 531 RIHICPPVKKPSKLGESL-ISLAAIVENEHKRLLARKSIIEKRK-EELERQILEKEKEEEKKRM-SSQKKTVDE-ERVRLLNEQRQREQDRIRREIEEKNKAEAKKMLEDLNKAGKKHVVVEGELTKEAYMELARNEQLKERHEMEKKLQKFAKTMDYLERAKRQEEAPLIEQAFQKRLEEEKILHEQEQLREIELSKQHHASDLQE 733
BLAST of CMJ_chr6_005260.1 vs. Araport11
Match: AT4G11420.1 (| eukaryotic translation initiation factor 3A | Chr4:6947834-6952053 REVERSE LENGTH=987 | 201606) HSP 1 Score: 163.696 bits (413), Expect = 1.423e-44 Identity = 113/207 (54.59%), Postives = 144/207 (69.57%), Query Frame = 0 Query: 106 PRSASKVGEMLSAGLGEVVDKEHERLVARKSIIEKLKLEEHKRQLIEMEWEEESRRMLRQQKKTAEEAEQKRLAAEFELRKNQRIL----LIQLEGAQALLDEK--------------AEKCSSSKKKEAKKPIMDQQLRERQEMDKKLRKLAKTLNYLERAKREEAIPLIEAAFQQRLEEERVLHENEQQQEVELSRERHDEDLKE 294 P ASK+ ++ L + V+KEH+RL+ARKSIIEK K E+ +RQ +EME EEE +R+ Q K EEAEQKRLAAE R+ QRIL +LE AQALL+E EK + K+ K+ + +QL+ERQEM+KKL+KLAKT++YLERAKREEA PLIEAA+Q+RL EER +E EQQ+EVELS+ERH+ DLKE Sbjct: 540 PSKASKLAGVI-PNLADTVEKEHKRLLARKSIIEKRK-EDQERQQLEMEREEEQKRLKLQ--KLTEEAEQKRLAAELAERRKQRILREIEEKELEEAQALLEETEKRMKKGKKKPLLDGEKVT---KQSVKERALTEQLKERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQRRLVEEREFYEREQQREVELSKERHESDLKE 739 The following BLAST results are available for this feature:
BLAST of CMJ_chr6_005260.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr6_005260.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 3 Position : 0 Zoom : x 1
BLAST of CMJ_chr6_005260.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 1 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr6_005260.1_cmj_v1 ID=CMJ_chr6_005260.1_cmj_v1; Name=CMJ_chr6_005260.1; organism=Citrus maxima; type=mRNA; length=1002bpback to top protein sequence of CMJ_chr6_005260.1_cmj_v1 >CMJ_chr6_005260.1_cmj_v1 ID=CMJ_chr6_005260.1_cmj_v1; Name=CMJ_chr6_005260.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=334bpback to top mRNA from alignment at chr6:12902209..12906798+ Legend: mRNAfive_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=4590bp; location=Sequence derived from: chr6:12902209..12906798+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr6:12902209..12906798+ >CMJ_chr6_005260.1_cmj_v1 ID=CMJ_chr6_005260.1_cmj_v1; Name=CMJ_chr6_005260.1; organism=Citrus maxima; type=CDS; length=1002bp; location=Sequence derived from: chr6:12902209..12906798+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|