CMJ_chr7_003330.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr7_003330.1 vs. ExPASy TrEMBL
Match: A0A2H5N8P0|A0A2H5N8P0_CITUN (RING-type domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_023200 PE=4 SV=1) HSP 1 Score: 531.946 bits (1369), Expect = 0.000e+0 Identity = 256/268 (95.52%), Postives = 260/268 (97.01%), Query Frame = 0 Query: 1 MAIVFGDFMYYVKLKQPIVDREELEHLYSELPCVGVTAFVQIFHQVEYKLIDCLHDGSRTDLGSFHNSESDERSCKFVIGDSTDFFTAVHGLSENLSSLGVDGTVFRNIVNAIIDYGRHRRKHVANRGRKVLPLHVSIKKEQRVYLHYGRYLMHMATIRESTAQRTDYGMVPASVPALGKLLKRVRMDEGESENPSRRTTTTESDDEKGLKQNYCCTLCLGDFGSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSDQNQHHV 268
MAIV+GDFMYYVKLKQPIVDREELEHLYSEL CVGVTAFVQIFH+VEYKLIDCLHDGSRTDLGSFHNSESDERSCKFVIGDSTDFFTAV GLSENLSSLGVDGTVF NIVNAIIDYGRHR KHVANRGRKVLPLHVSIKK +RVYLHYGRYLMHMATIRESTAQ TD G+VPASVPALG LLKRVRMDEGESENPSRRTTTTESDDEKGLKQNYCCTLCLGDFGSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSDQNQHHV
Sbjct: 1 MAIVYGDFMYYVKLKQPIVDREELEHLYSELRCVGVTAFVQIFHEVEYKLIDCLHDGSRTDLGSFHNSESDERSCKFVIGDSTDFFTAVRGLSENLSSLGVDGTVFCNIVNAIIDYGRHRHKHVANRGRKVLPLHVSIKKGKRVYLHYGRYLMHMATIRESTAQHTDDGVVPASVPALGNLLKRVRMDEGESENPSRRTTTTESDDEKGLKQNYCCTLCLGDFGSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSDQNQHHV 268
BLAST of CMJ_chr7_003330.1 vs. ExPASy TrEMBL
Match: V4TJT0|V4TJT0_CITCL (RING-type domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10033846mg PE=4 SV=1) HSP 1 Score: 514.612 bits (1324), Expect = 0.000e+0 Identity = 248/257 (96.50%), Postives = 252/257 (98.05%), Query Frame = 0 Query: 1 MAIVFGDFMYYVKLKQPIVDREELEHLYSELPCVGVTAFVQIFHQVEYKLIDCLHDGSRTDLGSFHNSESDERSCKFVIGDSTDFFTAVHGLSENLSSLGVDGTVFRNIVNAIIDYGRHRRKHVANRGRKVLPLHVSIKKEQRVYLHYGRYLMHMATIRESTAQRTDYGMVPASVPALGKLLKRVRMDEGESENPSRRTTTTESDDEKGLKQNYCCTLCLGDFGSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQ 257
MAIV+GDFMYYVKLKQPIVDREELEHLYSEL CVGVTAFVQIFH+VEYKLIDCLHDGSRTDLGSFHNSESDERSCKFVIGDSTDFFTAV GLSENLSSLGVDGTVF NIVNAIIDYGRHRRKHVANRGRKVLPLHVSIKKE+RVYLHYGRYLMHMATIRESTAQ TD G+VPASVPALGKLLKRVRMDEGESENPSRRTTTTESDDEKGLKQNYCCTLCLGDFGSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQ
Sbjct: 1 MAIVYGDFMYYVKLKQPIVDREELEHLYSELRCVGVTAFVQIFHEVEYKLIDCLHDGSRTDLGSFHNSESDERSCKFVIGDSTDFFTAVRGLSENLSSLGVDGTVFCNIVNAIIDYGRHRRKHVANRGRKVLPLHVSIKKEKRVYLHYGRYLMHMATIRESTAQHTDDGVVPASVPALGKLLKRVRMDEGESENPSRRTTTTESDDEKGLKQNYCCTLCLGDFGSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQ 257
BLAST of CMJ_chr7_003330.1 vs. ExPASy TrEMBL
Match: A0A5C7HJB3|A0A5C7HJB3_9ROSI (RING-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_017775 PE=4 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.980e-37 Identity = 87/237 (36.71%), Postives = 128/237 (54.01%), Query Frame = 0 Query: 40 VQIFHQVEY----KLIDCLHDGSRTDLG----SFHNSESDERSCKFVIGDSTDFFTAVHGLSENLSSLGVDGTVFRNIVNAIIDYG-RHRRKHVANRGRKVLPLHVSIKKEQRVYLHYGRYLMHMATIRESTAQ--RTDYGMVPASVPALGKLLKRVRMDEGESENPSRRTTTTES-DDEKGLKQNYCCTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSD 262
VQ+ ++ Y + I+CLHDGS T+LG S S C F+ +T + T L++ LSS G+ +++ I +G R R V+P+HV I + Q ++ +Y RYLMH A +RES + R +YGMVPAS +L +LKRVR+ + + ++N C++CL + GS SMPCSH+FHGGCI +WL SHYCP C Y++PT++
Sbjct: 41 VQVEFKISYEHRRRFINCLHDGSTTNLGGGPPSRQQSSCILDLCGFMKESNTSYAT----LADKLSSFGIQRKAVHGLIDRIFVHGHRILGGQKGRRSSSVIPIHVIITRVQTLWANYERYLMHRA-LRESMVEFERRNYGMVPASASSLKNMLKRVRVAAADIDAEEESERKRRRVKISSSSREN--CSICLEEVEAGSYGTSMPCSHMFHGGCIVKWLKQSHYCPVCRYEMPTTN 270
BLAST of CMJ_chr7_003330.1 vs. ExPASy TrEMBL
Match: A0A5C7HHJ1|A0A5C7HHJ1_9ROSI (RING-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_017774 PE=4 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.874e-37 Identity = 84/233 (36.05%), Postives = 125/233 (53.65%), Query Frame = 0 Query: 40 VQIFHQVEY----KLIDCLHDGSRTDLGSFHNSESDERSCKFVIGDSTDFFTAVHGLSENLSSLGVDGTVFRNIVNAIIDYG-RHRRKHVANRGRKVLPLHVSIKKEQRVYLHYGRYLMHMATIRESTAQ--RTDYGMVPASVPALGKLLKRVRMDEGESENPSRRTTTTES-DDEKGLKQNYCCTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSD 262
VQ+ ++ Y + I+CLHDGS T+LG S + G + + T+ L++ LSS G+ +++ I +G R R V+P+HV I + Q ++ +Y RYLMH A +RES + R +YGMVPAS +L +LKRVR+ + + +N C++CL + GS SMPCSH+FHGGCI +WL SHYCP C Y++PT++
Sbjct: 41 VQVEFKISYEHRRRFINCLHDGSTTNLGGGPPSRQQSSCILDLCGFTKESNTSYATLADKLSSFGIQRKAVHGLIDRIFVHGHRILGGQKGRRSSSVIPIHVIITRVQTLWANYERYLMHRA-LRESMVEFERRNYGMVPASASSLKNMLKRVRVAAADIDAEEESERKRRRVKISSSSSEN--CSICLEEVEAGSYGTSMPCSHMFHGGCIVKWLKQSHYCPVCRYEMPTTN 270
BLAST of CMJ_chr7_003330.1 vs. ExPASy TrEMBL
Match: A0A5C7HHC2|A0A5C7HHC2_9ROSI (RING-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_017776 PE=4 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.497e-36 Identity = 87/237 (36.71%), Postives = 127/237 (53.59%), Query Frame = 0 Query: 40 VQIFHQVEY----KLIDCLHDGSRTDLG----SFHNSESDERSCKFVIGDSTDFFTAVHGLSENLSSLGVDGTVFRNIVNAIIDYG-RHRRKHVANRGRKVLPLHVSIKKEQRVYLHYGRYLMHMATIRESTAQ--RTDYGMVPASVPALGKLLKRVRMDEGESENPSRRTTTTES-DDEKGLKQNYCCTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSD 262
VQ+ ++ Y + I+CLHDGS T+LG S S C F+ +T + T L++ LSS G+ +++ I +G R R V+P+HV I + Q ++ +Y RYLMH A +RES + R +YGMVPAS +L +LKRVR+ + + +N C++CL + GS SMPCSH+FHGGCI +WL SHYCP C Y++PT++
Sbjct: 41 VQVEFKISYEHHRRFINCLHDGSTTNLGGGPPSRQQSSCILDLCGFMKESNTSYAT----LADKLSSFGIQRKAVHGLIDRIFVHGHRILGGQKGRRSSSVIPIHVIITRVQTLWANYERYLMHRA-LRESMVEFERRNYGMVPASASSLKNMLKRVRVAAADIDAEEESERKRRRVKISSSSSEN--CSICLEEVEAGSYGTSMPCSHMFHGGCIVKWLKQSHYCPVCRYEMPTTN 270
BLAST of CMJ_chr7_003330.1 vs. ExPASy TrEMBL
Match: A0A5C7HHC0|A0A5C7HHC0_9ROSI (RING-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_017773 PE=4 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.968e-34 Identity = 95/283 (33.57%), Postives = 149/283 (52.65%), Query Frame = 0 Query: 1 MAIVFGDFMYYVKLKQPIVDREELEHLYSE---LPCVGVTAFVQIFHQVEYKLIDCLHDGSRTDLGSFHNSESDERSCKFVIGD-STDFFTAVHGLSENLSSLGVDGTVFRNIVNAIIDYGRH--RRKHVANRGRKVLPLHVSIKKEQRVYLHYGRYLMHMATIRESTAQ--RTDYGMVPASVPALGKLLKRVRMDE----GESENPSRRTTTTESDDEKGLKQNYC----CTLCLGDFG--SSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTS-DQN 264
M+ G +++++ Q ++ +++L SE L V ++I + + I+C HDG G+ S S ERSC F + S T+ LSENL +L V + ++ +II GR +N G+KV+PL+ I + Q V HY RYL H A +RES + R +YG VPAS ++ LLKRVR++E G+ E + + + + ++ C++CL + S ++MPCSH+FH CI +WL SH+CP C Y++PT D+N
Sbjct: 1 MSSRLGRDRFFIRVGQ-FDHKDNVDNLNSEEASLSSSDVKVELKIIFKFYERSIECSHDGRERTTGNLLKS-SQERSCTFDLCKFSKQVQTSYTTLSENLKTLVVGEGLIDRLIESIISDGRKIIDSNGESNTGKKVIPLYAKITRVQYVIEHYDRYLTHRA-VRESMEEFERRNYGRVPASESSVKTLLKRVRVEEVAVAGDDEKQETKRSHVSVSESESDGESESEMMNCSICLEELWLESYGLAMPCSHVFHAECIMKWLKQSHFCPLCRYEMPTDRDKN 280
BLAST of CMJ_chr7_003330.1 vs. ExPASy TrEMBL
Match: A0A540L207|A0A540L207_MALBA (RING-type domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_033939 PE=4 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.953e-31 Identity = 95/257 (36.96%), Postives = 127/257 (49.42%), Query Frame = 0 Query: 36 VTAFVQIFHQVEYKLIDCLHDGSRTDLGSFHNSESDERSCKFVIGDSTDFFTAVHGLSENLSSLGVDGTVFRN-IVNAIIDYGRHRRKHVANRGRKVLPLHVSIKKEQRVYLHYGRYLMHMATIREST-------AQRTD-----YGMVPASVPALGKLLKRVRM-----DEGESENPSRRTTTTESDDEKGLK----QNYCCTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSDQNQHHV 268
V V+ H YK + D + T + + + ERSC F I D+ + + LS GV + R IV II+ G R RGR+VL LHV ++ E Y R + T+R T AQ T+ GMVPAS PA+ K+LKRVR+ D+GES PS E ++K K ++ CT+C+ F GS+ + MPC H+FHG CI +WL S YCP C +QVPT D NQ V
Sbjct: 41 VQLLVKFVHNFHYKFTNTAIDRTETTIREYDRIK--ERSCGFDIDKLKDYKYSFGIFTSMLSLTGV--RIRREAIVKLIINVGLKIRNKYCYRGRQVLGLHVYVRSE------YLRVRCNFCTVRRVTRMMEARLAQLTNDDNSNKGMVPASYPAINKVLKRVRVGSTSADDGES--PSHDDVEEEGREKKRRKIRVSESESCTVCMEQFKGGSTVVCMPCFHVFHGRCIVKWLRKSQYCPVCRFQVPT-DSNQKEV 284
BLAST of CMJ_chr7_003330.1 vs. ExPASy TrEMBL
Match: A0A2N9EBG2|A0A2N9EBG2_FAGSY (RING-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4 PE=4 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.616e-28 Identity = 89/263 (33.84%), Postives = 131/263 (49.81%), Query Frame = 0 Query: 13 KLKQPIVDREELEHLYSELPCVGVTAFVQIFHQVEYKLIDCLHDG-----SRTDLGSFHNSESDERSCKFVIGDSTDFFTAVHGLSENLSSLGVDGTVFRNIVNAIIDYGR---HRRKHVANRGRKVLPLHVSIKKEQRVYLHYGRYLMHMATIRESTAQ---RTDYGMVPASVPALGKLLKRVRM-DEGESENP-SRRTTTTESDDEKGLKQNYCCTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPT 260
K+ QP +D L+H S V ++++ +VE ++ DG S L H S S F + ++ + L L + +D + + ++ R + V+N GRKVLP+ I RVYLH RY + A +R S + R YGMVPA +L +LKRVR+ DE E+P ++R ES + ++ CT+CL DF GS A+ MPC+H+FH CI RWL SHYCP C +++PT
Sbjct: 15 KVWQPEID---LDHCRSLRSSSSVQVYIKLVAKVENVVLYRRSDGTISRISNNRLPDLHEEPSTTSSL-FNMSMFKNYDYSCQELITLLKIVNIDKYFHEIVADEVVCCARRIGNWVSRVSNMGRKVLPIFGDIIV-TRVYLHDERYWVARA-LRVSAMEFERRRRYGMVPARQSSLKVMLKRVRVGDEDCKESPETKRRCVRESTE----REKESCTICLDDFAPGSDALRMPCTHIFHAACIVRWLKESHYCPVCRFKMPT 267
BLAST of CMJ_chr7_003330.1 vs. ExPASy TrEMBL
Match: A0A061E952|A0A061E952_THECC (RING-type domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_011394 PE=4 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.136e-27 Identity = 76/235 (32.34%), Postives = 118/235 (50.21%), Query Frame = 0 Query: 34 VGVTAFVQIFHQVEYKLIDCLHDGSRTDLGSFHNSESDERSCKFVIGDSTDFFTAVHGLSENLSSLGVDGT--VFRNIVNAIIDYGRHRRKHVANRGRKVLPLHVSIKKEQRVYLHYGRYLMHMATIRESTA---QRTDYGMVPASVPALGKLLKRVRMDEGESENPSRRTTTTESDDEKGLKQNYCCTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTS 261
V VT +++ + Y L D D D F + + +F + + F A L+ L LGVD + +F ++ AII +GR +N+GRKVLPLH + +++Y + + E +A + ++Y MVPA ++ K+LKR R++ GE E+D ++ + C +CL + GS A MPCSH FHG CI +WL SHYCP C +++PT
Sbjct: 34 VEVTIILELKLKCHYCLTDQFIDLDNADPIVF------QENIRFHLHVLKNNFRAYQILAPMLRRLGVDPSSPLFDTVIEAIIRHGRRMGTWESNKGRKVLPLHAKVWGTFVEHVNYEEEEVLVVRALEESASELETSNYNMVPAKESSIKKMLKRFRVEGGEYNQKG-----GENDIKRRRVEGENCVICLEELKVGSYASRMPCSHAFHGDCIEKWLKQSHYCPVCRFEMPTE 257
BLAST of CMJ_chr7_003330.1 vs. ExPASy TrEMBL
Match: A0A061EC19|A0A061EC19_THECC (RING-type domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_011730 PE=4 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.715e-23 Identity = 75/233 (32.19%), Postives = 114/233 (48.93%), Query Frame = 0 Query: 34 VGVTAFVQIFHQVEYKLIDCLHDGSRTDLGSFHNSESDERSCKFVIGDSTDFFTAVHGLSENLSSLGVDGTVFRN---IVNAIIDYGRHRRKHVANRGRKVLPLHVSIKKEQRVYLHYGRYLMHMATIRESTAQRTDYGMVPASVPALGKLLKRVRMDEGESENPSRRTTTTESDDEKGLKQNYCCTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTS 261
V +T +++ + Y L D D D G F S E +F + D A L+ L L V VF I++ II +G +NRGR+VL L + ++ Y + + E +A ++ GMVPA ++ ++LKRVR++ GE + + + +K L + C +CL +F GS A+ MPCSH FHG CI +WL SHYCP C +++PT
Sbjct: 35 VELTISLRVDRKCHYSLNDQFIDLE--DEGPF----SSEEFLRFDLDVLRDHHRAYQVLAPVLGRLLVASNVFLTFDPIIDDIIRHGLKIENWASNRGREVLILCAELWGTVVEHIEYQEEAVLLGRALEESA--SESGMVPAKESSVKRMLKRVRVEAGECDQKAGQNI------KKRLVKVEDCVICLEEFKVGSVALQMPCSHTFHGDCIEKWLKQSHYCPVCRFEMPTE 253
BLAST of CMJ_chr7_003330.1 vs. Araport11
Match: AT1G55530.2 (| RING/U-box superfamily protein | Chr1:20729472-20730527 REVERSE LENGTH=351 | 201606) HSP 1 Score: 62.3882 bits (150), Expect = 5.651e-11 Identity = 48/170 (28.24%), Postives = 71/170 (41.76%), Query Frame = 0 Query: 118 RHRRKHVANRGRKVLPLHVSIKKEQRVYL--------HYGRYLMHMATIRESTAQRT-DYGMVPASV-------PALGKLLKRV-RMDEGESENPSRRTTTTESDDEKGLKQNYCCTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSDQNQHHV 268
R RR+H A VL L I+ V + GR ++ + + T Q + D VPA P LL+R+ D P + E+ +++ C++CL DF G+ A MPC+H FH C+ WL + CP C YQ+P + V
Sbjct: 112 RRRRRHSA----AVLQLLQGIRAGLSVESESTGNGGNNPGRVILINTSNQTITVQNSADMDSVPAGSLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSV 277
BLAST of CMJ_chr7_003330.1 vs. Araport11
Match: AT1G55530.1 (| RING/U-box superfamily protein | Chr1:20729472-20730527 REVERSE LENGTH=351 | 201606) HSP 1 Score: 62.3882 bits (150), Expect = 5.651e-11 Identity = 48/170 (28.24%), Postives = 71/170 (41.76%), Query Frame = 0 Query: 118 RHRRKHVANRGRKVLPLHVSIKKEQRVYL--------HYGRYLMHMATIRESTAQRT-DYGMVPASV-------PALGKLLKRV-RMDEGESENPSRRTTTTESDDEKGLKQNYCCTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSDQNQHHV 268
R RR+H A VL L I+ V + GR ++ + + T Q + D VPA P LL+R+ D P + E+ +++ C++CL DF G+ A MPC+H FH C+ WL + CP C YQ+P + V
Sbjct: 112 RRRRRHSA----AVLQLLQGIRAGLSVESESTGNGGNNPGRVILINTSNQTITVQNSADMDSVPAGSLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSV 277
BLAST of CMJ_chr7_003330.1 vs. Araport11
Match: AT1G55530.3 (| RING/U-box superfamily protein | Chr1:20729472-20730527 REVERSE LENGTH=318 | 201606) HSP 1 Score: 60.8474 bits (146), Expect = 1.919e-10 Identity = 44/154 (28.57%), Postives = 64/154 (41.56%), Query Frame = 0 Query: 118 RHRRKHVANRGRKVLPLHVSIKKEQRVYLHYGRYLMHMATIRESTAQRTDYGMVPASVPALGKLLKRV-RMDEGESENPSRRTTTTESDDEKGLKQNYCCTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSDQNQHHV 268
R RR+H A VL L I+ ++ EST DY + P LL+R+ D P + E+ +++ C++CL DF G+ A MPC+H FH C+ WL + CP C YQ+P + V
Sbjct: 112 RRRRRHSA----AVLQLLQGIRA-------------GLSVESESTGNGGDYFIGPG----FEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEAKTDSV 244
BLAST of CMJ_chr7_003330.1 vs. Araport11
Match: AT4G26400.2 (| RING/U-box superfamily protein | Chr4:13344953-13346023 REVERSE LENGTH=356 | 201606) HSP 1 Score: 59.6918 bits (143), Expect = 4.929e-10 Identity = 24/58 (41.38%), Postives = 34/58 (58.62%), Query Frame = 0 Query: 210 LKQNYCCTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSDQNQ 265
+ ++ C++CL DF GS A MPC H FH CI WL + CP C Y++P D+ +
Sbjct: 235 ISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDETK 292
BLAST of CMJ_chr7_003330.1 vs. Araport11
Match: AT4G26400.1 (| RING/U-box superfamily protein | Chr4:13344953-13346023 REVERSE LENGTH=356 | 201606) HSP 1 Score: 59.6918 bits (143), Expect = 4.929e-10 Identity = 24/58 (41.38%), Postives = 34/58 (58.62%), Query Frame = 0 Query: 210 LKQNYCCTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSDQNQ 265
+ ++ C++CL DF GS A MPC H FH CI WL + CP C Y++P D+ +
Sbjct: 235 ISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDETK 292
BLAST of CMJ_chr7_003330.1 vs. Araport11
Match: AT3G13430.4 (| RING/U-box superfamily protein | Chr3:4367754-4368701 FORWARD LENGTH=315 | 201606) HSP 1 Score: 59.3066 bits (142), Expect = 5.352e-10 Identity = 23/52 (44.23%), Postives = 30/52 (57.69%), Query Frame = 0 Query: 216 CTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSDQNQ 265
C++CL DF G A MPC H FH C+ WL + CP C Y +PT D ++
Sbjct: 225 CSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDDE 276
BLAST of CMJ_chr7_003330.1 vs. Araport11
Match: AT3G13430.3 (| RING/U-box superfamily protein | Chr3:4367754-4368701 FORWARD LENGTH=315 | 201606) HSP 1 Score: 59.3066 bits (142), Expect = 5.352e-10 Identity = 23/52 (44.23%), Postives = 30/52 (57.69%), Query Frame = 0 Query: 216 CTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSDQNQ 265
C++CL DF G A MPC H FH C+ WL + CP C Y +PT D ++
Sbjct: 225 CSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDDE 276
BLAST of CMJ_chr7_003330.1 vs. Araport11
Match: AT3G13430.2 (| RING/U-box superfamily protein | Chr3:4367754-4368701 FORWARD LENGTH=315 | 201606) HSP 1 Score: 59.3066 bits (142), Expect = 5.352e-10 Identity = 23/52 (44.23%), Postives = 30/52 (57.69%), Query Frame = 0 Query: 216 CTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSDQNQ 265
C++CL DF G A MPC H FH C+ WL + CP C Y +PT D ++
Sbjct: 225 CSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDDE 276
BLAST of CMJ_chr7_003330.1 vs. Araport11
Match: AT3G13430.1 (| RING/U-box superfamily protein | Chr3:4367754-4368701 FORWARD LENGTH=315 | 201606) HSP 1 Score: 59.3066 bits (142), Expect = 5.352e-10 Identity = 23/52 (44.23%), Postives = 30/52 (57.69%), Query Frame = 0 Query: 216 CTLCLGDF--GSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSDQNQ 265
C++CL DF G A MPC H FH C+ WL + CP C Y +PT D ++
Sbjct: 225 CSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDDE 276
BLAST of CMJ_chr7_003330.1 vs. Araport11
Match: AT5G08139.1 (| RING/U-box superfamily protein | Chr5:2616487-2617617 FORWARD LENGTH=376 | 201606) HSP 1 Score: 58.9214 bits (141), Expect = 9.833e-10 Identity = 44/155 (28.39%), Postives = 72/155 (46.45%), Query Frame = 0 Query: 118 RHRRKHVANRGRKVL---PLHVSIKKEQR-VYL--HYGRYLMHMATIRE--STAQRTDYGMVPASVPALGKLLKRVRMDEGESENPSRRTTTTESDDEKGLKQNYCCTLCLGD--FGSSAISMPCSHLFHGGCIFRWLSMSHYCPACGYQVPTSD 262
R R + N G +VL L ++ + R +Y+ + Y+ + E + A+ + G+ P S L L V + EGE+ DD+ GL C +C + G+ A+ +PC+H +H CI WL + + CP C Y++PT D
Sbjct: 221 RERAEGSGNLGWEVLLNHTLEINFDVDNRELYIGGDHDDYVQDYDMLFEQFADAEVSVIGLPPTSKSFLNNL--PVVLLEGEN------------DDDGGL----VCAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVCRYELPTDD 357 The following BLAST results are available for this feature:
BLAST of CMJ_chr7_003330.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr7_003330.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr7_003330.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr7_003330.1_cmj_v1 ID=CMJ_chr7_003330.1_cmj_v1; Name=CMJ_chr7_003330.1; organism=Citrus maxima; type=mRNA; length=807bpback to top protein sequence of CMJ_chr7_003330.1_cmj_v1 >CMJ_chr7_003330.1_cmj_v1 ID=CMJ_chr7_003330.1_cmj_v1; Name=CMJ_chr7_003330.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=269bpback to top mRNA from alignment at chr7:2469540..2470556+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1017bp; location=Sequence derived from: chr7:2469540..2470556+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr7:2469540..2470556+ >CMJ_chr7_003330.1_cmj_v1 ID=CMJ_chr7_003330.1_cmj_v1; Name=CMJ_chr7_003330.1; organism=Citrus maxima; type=CDS; length=807bp; location=Sequence derived from: chr7:2469540..2470556+ (Citrus maximaback to top |