CMJ_chr8_012310.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr8_012310.1 vs. ExPASy TrEMBL
Match: A0A2H5Q2R4|A0A2H5Q2R4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_188220 PE=4 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 1.072e-76 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 Query: 1 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114
MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL
Sbjct: 2 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 115
BLAST of CMJ_chr8_012310.1 vs. ExPASy TrEMBL
Match: A0A067E776|A0A067E776_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g033657mg PE=4 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 1.237e-76 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 Query: 1 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114
MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL
Sbjct: 1 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114
BLAST of CMJ_chr8_012310.1 vs. ExPASy TrEMBL
Match: V4UCP3|V4UCP3_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029577mg PE=4 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 3.511e-76 Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0 Query: 1 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114
MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLRE+GVKLL
Sbjct: 1 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLRESGVKLL 114
BLAST of CMJ_chr8_012310.1 vs. ExPASy TrEMBL
Match: V4RR96|V4RR96_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029577mg PE=4 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 3.872e-76 Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0 Query: 1 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114
MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLRE+GVKLL
Sbjct: 15 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLRESGVKLL 128
BLAST of CMJ_chr8_012310.1 vs. ExPASy TrEMBL
Match: A0A200PMN7|A0A200PMN7_9MAGN (Ribosomal protein L18/L5 OS=Macleaya cordata OX=56857 GN=BVC80_8973g19 PE=4 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.372e-65 Identity = 97/114 (85.09%), Postives = 109/114 (95.61%), Query Frame = 0 Query: 1 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114
MVIPPPVR P+++ FLKPYVL+MHFTNKYVSAQV+HSPTATVASSA+SQEK LR+S+ TRDVAAA+KIGKILGERLLLKDIPAV+VFLKREQ+YHGKV+AVIDSLREAGVKLL
Sbjct: 1 MVIPPPVRSPRITKFLKPYVLKMHFTNKYVSAQVVHSPTATVASSASSQEKVLRASMENTRDVAAAAKIGKILGERLLLKDIPAVSVFLKREQKYHGKVRAVIDSLREAGVKLL 114
BLAST of CMJ_chr8_012310.1 vs. ExPASy TrEMBL
Match: A0A7J6V809|A0A7J6V809_THATH (Ribosomal L18p/L5e family protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_029327 PE=4 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 4.158e-65 Identity = 94/114 (82.46%), Postives = 110/114 (96.49%), Query Frame = 0 Query: 1 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114
MVIPPPVR +++++LKPY+L+MHFTNKYVSAQVIHSPTATVASSA+SQEK LRSS+GCTRDVAAA+KIGK+LGERLL+KDIPAV+VFL REQ+YHGKVKAVIDSLR+AGVKL+
Sbjct: 1 MVIPPPVRAKRITDYLKPYLLKMHFTNKYVSAQVIHSPTATVASSASSQEKLLRSSMGCTRDVAAAAKIGKLLGERLLVKDIPAVSVFLNREQKYHGKVKAVIDSLRDAGVKLI 114
BLAST of CMJ_chr8_012310.1 vs. ExPASy TrEMBL
Match: A0A5J5BTR8|A0A5J5BTR8_9ASTE (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_019924 PE=4 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 9.640e-65 Identity = 97/114 (85.09%), Postives = 110/114 (96.49%), Query Frame = 0 Query: 1 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114
MVIPPP++P K++ FLKPYVL+MHFTNKYVSAQVIHSPTATVAS+A+SQEKALRSS+ TRDVAAA+KIGKILGERLLLKDIPAV+VFLKR+Q+YHGKVKAVIDSLREAGVKL+
Sbjct: 39 MVIPPPIKPEKITKFLKPYVLKMHFTNKYVSAQVIHSPTATVASAASSQEKALRSSMEITRDVAAAAKIGKILGERLLLKDIPAVSVFLKRDQKYHGKVKAVIDSLREAGVKLV 152
BLAST of CMJ_chr8_012310.1 vs. ExPASy TrEMBL
Match: A0A6A1UVH9|A0A6A1UVH9_9ROSI (50S ribosomal protein L18 OS=Morella rubra OX=262757 GN=CJ030_MR8G028470 PE=4 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 2.156e-64 Identity = 98/114 (85.96%), Postives = 106/114 (92.98%), Query Frame = 0 Query: 1 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114
MVIPPPVRP ++ N+LKPYVL+MHFTNKYVSAQVIH+PTATVAS+A+SQEKALR S+ TRDVAAA KIGKILGERLLLKDIPAV V LKREQRYHGKVKAVIDSLREAGVKLL
Sbjct: 1 MVIPPPVRPSRIINYLKPYVLKMHFTNKYVSAQVIHAPTATVASAASSQEKALRPSMESTRDVAAAGKIGKILGERLLLKDIPAVAVHLKREQRYHGKVKAVIDSLREAGVKLL 114
BLAST of CMJ_chr8_012310.1 vs. ExPASy TrEMBL
Match: A0A1U8A3X8|A0A1U8A3X8_NELNU (uncharacterized protein LOC104598927 OS=Nelumbo nucifera OX=4432 GN=LOC104598927 PE=4 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 2.570e-64 Identity = 95/114 (83.33%), Postives = 107/114 (93.86%), Query Frame = 0 Query: 1 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114
MVIPPPV+PP+++ F+KPYVLRMHFTNKYVSAQVIHSPTATVA+SA+SQEKALR S+ TRDVAAASKIGKILGERLLLKDIPAV+V LKREQ+YHGK+KAVIDSLRE GVK +
Sbjct: 1 MVIPPPVKPPRITKFIKPYVLRMHFTNKYVSAQVIHSPTATVATSASSQEKALRLSMENTRDVAAASKIGKILGERLLLKDIPAVSVILKREQKYHGKIKAVIDSLRETGVKFI 114
BLAST of CMJ_chr8_012310.1 vs. ExPASy TrEMBL
Match: A0A067GT17|A0A067GT17_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g033650mg PE=4 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 5.421e-64 Identity = 97/114 (85.09%), Postives = 106/114 (92.98%), Query Frame = 0 Query: 1 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114
MV+PPP RP K +PYVL+MH TNKYVSAQV+HSPTATVASSA+SQEKALRS+IGCTRDVAAASKIGK+LGERLLLKDIPAV+VFLKREQRYHGKVKA+IDSLREAGVKLL
Sbjct: 1 MVVPPPRRPLKTYQPSEPYVLKMHLTNKYVSAQVVHSPTATVASSASSQEKALRSTIGCTRDVAAASKIGKLLGERLLLKDIPAVSVFLKREQRYHGKVKAIIDSLREAGVKLL 114
BLAST of CMJ_chr8_012310.1 vs. ExPASy Swiss-Prot
Match: RL18_ALISL (50S ribosomal protein L18 OS=Aliivibrio salmonicida (strain LFI1238) OX=316275 GN=rplR PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 8.190e-14 Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 0 Query: 21 LRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113
L +H T ++ AQVI + V ++A++ EKA+R +G T + AAA IGK++ ER + K I V F + +YHG+V A+ DS REAG+K
Sbjct: 26 LVVHRTPRHTYAQVIAPNGSEVIAAASTVEKAIREQVGNTSNKAAAVAIGKLIAERAIEKGITNV-AFDRSGFQYHGRVAALADSAREAGLKF 117
BLAST of CMJ_chr8_012310.1 vs. ExPASy Swiss-Prot
Match: RL18_AZOC5 (50S ribosomal protein L18 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) OX=438753 GN=rplR PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.176e-13 Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 0 Query: 21 LRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113
L +H T+K++ AQ+I +A+S EK LRSS+ DV AA IGK++ ER K + AV VF + YHG+VKA+ + RE G++
Sbjct: 29 LSVHRTSKHIYAQIIDDAKGETLVAASSLEKDLRSSLKTGADVEAAKAIGKLVAERATAKGVTAV-VFDRGAYIYHGRVKALAEGAREGGLQF 120
BLAST of CMJ_chr8_012310.1 vs. ExPASy Swiss-Prot
Match: RL18_BRAHW (50S ribosomal protein L18 OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) OX=565034 GN=rplR PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.184e-13 Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 0 Query: 21 LRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113
L +H + KYVSAQ+I +SA+SQEK L+S ++V A +IGK+L R K+I V VF + YHGK+K++ D REAG+K
Sbjct: 31 LTVHKSLKYVSAQIIDDSKGITLASASSQEKDLKSG----KNVDIAKEIGKVLATRAKEKNISEV-VFDRNGYIYHGKIKSLADGAREAGLKF 118
BLAST of CMJ_chr8_012310.1 vs. ExPASy Swiss-Prot
Match: RL18_ALIF1 (50S ribosomal protein L18 OS=Aliivibrio fischeri (strain ATCC 700601 / ES114) OX=312309 GN=rplR PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 2.071e-13 Identity = 38/93 (40.86%), Postives = 58/93 (62.37%), Query Frame = 0 Query: 21 LRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113
L +H T ++ AQVI + V ++A++ EKA+R +G T + AAA IGK++ ER + K I V F + +YHG+V A+ +S REAG+K
Sbjct: 26 LVVHRTPRHTYAQVIAPNGSEVIAAASTVEKAIREQLGSTSNKAAAEAIGKLIAERAIEKGITNV-AFDRSGFQYHGRVAALAESAREAGLKF 117
BLAST of CMJ_chr8_012310.1 vs. ExPASy Swiss-Prot
Match: RL18_BUCBP (50S ribosomal protein L18 OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) OX=224915 GN=rplR PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 2.224e-13 Identity = 38/99 (38.38%), Postives = 65/99 (65.66%), Query Frame = 0 Query: 17 KPYVLRM--HFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113
K +++R+ H T+K++ AQ+I S A V +SA++ EK + + + T ++ A+ IGK + ER L+K I V+ F + +YHG+VKA+ D+ RE+G+K
Sbjct: 24 KLHLIRLVVHRTSKHIYAQIIDSKNALVLTSASTVEKEILNLVKYTGNIHASICIGKKIAERALMKGIINVS-FDRSGFQYHGRVKALADAARESGLKF 121
BLAST of CMJ_chr8_012310.1 vs. ExPASy Swiss-Prot
Match: RL18_XANP2 (50S ribosomal protein L18 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) OX=78245 GN=rplR PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 2.446e-13 Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 0 Query: 21 LRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113
L +H T++++ AQVI ++A+S EK LR+S+ D AA IGK++ ER L K + AV VF + +HG+VKA+ + RE G++
Sbjct: 29 LSVHRTSQHIYAQVIDDANGETLAAASSLEKDLRTSLKTGADTDAAKTIGKLVAERALAKGVTAV-VFDRGAYIFHGRVKALAEGAREGGLQF 120
BLAST of CMJ_chr8_012310.1 vs. ExPASy Swiss-Prot
Match: RL18_ALIFM (50S ribosomal protein L18 OS=Aliivibrio fischeri (strain MJ11) OX=388396 GN=rplR PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 2.830e-13 Identity = 38/93 (40.86%), Postives = 58/93 (62.37%), Query Frame = 0 Query: 21 LRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113
L +H T ++ AQVI + V ++A++ EKA+R +G T + AAA IGK++ ER + K I V F + +YHG+V A+ +S REAG+K
Sbjct: 26 LVVHRTPRHTYAQVIAPNGSEVIAAASTVEKAIREQLGNTSNKAAAEAIGKLIAERAIEKGITNV-AFDRSGFQYHGRVAALAESAREAGLKF 117
BLAST of CMJ_chr8_012310.1 vs. ExPASy Swiss-Prot
Match: RL18_VIBPR (50S ribosomal protein L18 OS=Vibrio proteolyticus OX=671 GN=rplR PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 3.400e-13 Identity = 38/93 (40.86%), Postives = 58/93 (62.37%), Query Frame = 0 Query: 21 LRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113
L +H T ++V AQVI S + V ++A++ EKA+R + T +V AA +GK + ER L K + V F + +YHG+V A+ +S REAG+K
Sbjct: 26 LVVHRTPRHVYAQVIASNGSEVIAAASTVEKAIREQVKNTGNVDAAKAVGKAIAERALEKGVETVA-FDRSGFQYHGRVAALAESAREAGLKF 117
BLAST of CMJ_chr8_012310.1 vs. ExPASy Swiss-Prot
Match: RL18_FERNB (50S ribosomal protein L18 OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) OX=381764 GN=rplR PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.156e-12 Identity = 33/88 (37.50%), Postives = 55/88 (62.50%), Query Frame = 0 Query: 26 TNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113
+ K++ AQ+I +A++ EKA++ + T ++ AA ++GK++ ER L K I V VF + +YHG+VKA+ D+ REAG+K
Sbjct: 36 SEKHMYAQIIDDTKGITLVAASTVEKAMKEKLQKTWNITAAKEVGKLIAERALAKGIKEV-VFDRGGFKYHGRVKALADAAREAGLKF 122
BLAST of CMJ_chr8_012310.1 vs. ExPASy Swiss-Prot
Match: RL18_BRASB (50S ribosomal protein L18 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) OX=288000 GN=rplR PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 3.343e-12 Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 0 Query: 26 TNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113
++K++ AQVI +SA+S EK +RSS D+ AA +GK+L ER + I V VF + YHG+VKA+ D+ RE+G+
Sbjct: 34 SSKHIYAQVIDDQKGETLASASSMEKEMRSSGNTGADIDAAKAVGKLLAERAVKAGIKEV-VFDRGGYLYHGRVKALADAARESGLSF 120
BLAST of CMJ_chr8_012310.1 vs. Araport11
Match: AT5G27820.1 (| Ribosomal L18p/L5e family protein | Chr5:9860584-9860928 FORWARD LENGTH=114 | 201606) HSP 1 Score: 194.897 bits (494), Expect = 9.098e-66 Identity = 93/114 (81.58%), Postives = 106/114 (92.98%), Query Frame = 0 Query: 1 MVIPPPVRPPKLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114
MVIPP VRPP+L ++LKPYVL+MHFTNK+V AQVIHSPTATVA SA+SQEKALR ++ TRDVAAASKIGKILGERLL+KDIPAVT+ +K+EQRYHGKVKAVIDS+REAGVKLL
Sbjct: 1 MVIPPAVRPPRLFDYLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITRDVAAASKIGKILGERLLMKDIPAVTIQMKKEQRYHGKVKAVIDSVREAGVKLL 114
BLAST of CMJ_chr8_012310.1 vs. Araport11
Match: AT3G20230.1 (| Ribosomal L18p/L5e family protein | Chr3:7055639-7056679 REVERSE LENGTH=187 | 201606) HSP 1 Score: 72.0182 bits (175), Expect = 1.179e-16 Identity = 33/97 (34.02%), Postives = 63/97 (64.95%), Query Frame = 0 Query: 15 FLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGV 111
+++P++L + F+ K++ A+V+H PT+ V S AT+ + +R++I D A IGK++ ER + D+ AV+ ++ +R GK+ VID+++E G+
Sbjct: 87 YMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPSLVDNEACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 183
BLAST of CMJ_chr8_012310.1 vs. Araport11
Match: AT3G45020.4 (| Ribosomal L18p/L5e family protein | Chr3:16469167-16469568 REVERSE LENGTH=133 | 201606) HSP 1 Score: 53.9138 bits (128), Expect = 3.421e-10 Identity = 35/111 (31.53%), Postives = 62/111 (55.86%), Query Frame = 0 Query: 16 LKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTR--DVAAASKIGKILGERLLLKDIP-----AVTVFLKREQRYHG-----KVKAVIDSLREAGVKLL 114
LK YVLR+ + KY++A V+ + ++A++ E +++S+ C R + AA+ +G++L RL ++ + + +K+E G KV AVI+SLR GV L+
Sbjct: 4 LKRYVLRLFMSIKYITANVVDRNNGRIVTTASTVEHTIKNSLECGRTCNAKAAAIVGEVLAMRLKVEGLQDGQGRGIHADVKKEIEKKGFKSRTKVWAVINSLRNNGVTLI 114
BLAST of CMJ_chr8_012310.1 vs. Araport11
Match: AT3G45020.3 (| Ribosomal L18p/L5e family protein | Chr3:16469167-16469568 REVERSE LENGTH=133 | 201606) HSP 1 Score: 53.9138 bits (128), Expect = 3.421e-10 Identity = 35/111 (31.53%), Postives = 62/111 (55.86%), Query Frame = 0 Query: 16 LKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTR--DVAAASKIGKILGERLLLKDIP-----AVTVFLKREQRYHG-----KVKAVIDSLREAGVKLL 114
LK YVLR+ + KY++A V+ + ++A++ E +++S+ C R + AA+ +G++L RL ++ + + +K+E G KV AVI+SLR GV L+
Sbjct: 4 LKRYVLRLFMSIKYITANVVDRNNGRIVTTASTVEHTIKNSLECGRTCNAKAAAIVGEVLAMRLKVEGLQDGQGRGIHADVKKEIEKKGFKSRTKVWAVINSLRNNGVTLI 114
BLAST of CMJ_chr8_012310.1 vs. Araport11
Match: AT3G45020.2 (| Ribosomal L18p/L5e family protein | Chr3:16469167-16469568 REVERSE LENGTH=133 | 201606) HSP 1 Score: 53.9138 bits (128), Expect = 3.421e-10 Identity = 35/111 (31.53%), Postives = 62/111 (55.86%), Query Frame = 0 Query: 16 LKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTR--DVAAASKIGKILGERLLLKDIP-----AVTVFLKREQRYHG-----KVKAVIDSLREAGVKLL 114
LK YVLR+ + KY++A V+ + ++A++ E +++S+ C R + AA+ +G++L RL ++ + + +K+E G KV AVI+SLR GV L+
Sbjct: 4 LKRYVLRLFMSIKYITANVVDRNNGRIVTTASTVEHTIKNSLECGRTCNAKAAAIVGEVLAMRLKVEGLQDGQGRGIHADVKKEIEKKGFKSRTKVWAVINSLRNNGVTLI 114
BLAST of CMJ_chr8_012310.1 vs. Araport11
Match: AT3G45020.1 (| Ribosomal L18p/L5e family protein | Chr3:16469167-16469568 REVERSE LENGTH=133 | 201606) HSP 1 Score: 53.9138 bits (128), Expect = 3.421e-10 Identity = 35/111 (31.53%), Postives = 62/111 (55.86%), Query Frame = 0 Query: 16 LKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTR--DVAAASKIGKILGERLLLKDIP-----AVTVFLKREQRYHG-----KVKAVIDSLREAGVKLL 114
LK YVLR+ + KY++A V+ + ++A++ E +++S+ C R + AA+ +G++L RL ++ + + +K+E G KV AVI+SLR GV L+
Sbjct: 4 LKRYVLRLFMSIKYITANVVDRNNGRIVTTASTVEHTIKNSLECGRTCNAKAAAIVGEVLAMRLKVEGLQDGQGRGIHADVKKEIEKKGFKSRTKVWAVINSLRNNGVTLI 114 The following BLAST results are available for this feature:
BLAST of CMJ_chr8_012310.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr8_012310.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr8_012310.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 6 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr8_012310.1_cmj_v1 ID=CMJ_chr8_012310.1_cmj_v1; Name=CMJ_chr8_012310.1; organism=Citrus maxima; type=mRNA; length=345bpback to top protein sequence of CMJ_chr8_012310.1_cmj_v1 >CMJ_chr8_012310.1_cmj_v1 ID=CMJ_chr8_012310.1_cmj_v1; Name=CMJ_chr8_012310.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=115bpback to top mRNA from alignment at chr8:19927213..19928802- Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1590bp; location=Sequence derived from: chr8:19927213..19928802- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr8:19927213..19928802- >CMJ_chr8_012310.1_cmj_v1 ID=CMJ_chr8_012310.1_cmj_v1; Name=CMJ_chr8_012310.1; organism=Citrus maxima; type=CDS; length=345bp; location=Sequence derived from: chr8:19927213..19928802- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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