CMJ_chr8_014790.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr8_014790.1 vs. ExPASy TrEMBL
Match: A0A2H5QK24|A0A2H5QK24_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_237710 PE=4 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 3.123e-59 Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 0 Query: 9 TDFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDEGAALSFKYYQHCFSSKKESVVLSSYELS 100 TDFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDEGAALSFKYYQHCFSS KESVVL SYELS Sbjct: 20 TDFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDEGAALSFKYYQHCFSSMKESVVLPSYELS 111
BLAST of CMJ_chr8_014790.1 vs. ExPASy TrEMBL
Match: A0A2H5QK36|A0A2H5QK36_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_237710 PE=4 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.056e-58 Identity = 89/92 (96.74%), Postives = 89/92 (96.74%), Query Frame = 0 Query: 9 TDFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDEGAALSFKYYQHCFSSKKESVVLSSYELS 100 DFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDEGAALSFKYYQHCFSS KESVVL SYELS Sbjct: 62 ADFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDEGAALSFKYYQHCFSSMKESVVLPSYELS 153
BLAST of CMJ_chr8_014790.1 vs. ExPASy TrEMBL
Match: A0A2H5QK29|A0A2H5QK29_CITUN (SET domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_237720 PE=4 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 6.113e-53 Identity = 81/88 (92.05%), Postives = 85/88 (96.59%), Query Frame = 0 Query: 8 ITDFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDEGAALSFKYYQHCFSSKKESVVLS 95 DFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDEGAALSFKYYQHCFSS KES++++ Sbjct: 82 FADFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDEGAALSFKYYQHCFSSMKESILVA 169
BLAST of CMJ_chr8_014790.1 vs. ExPASy TrEMBL
Match: V4SBW4|V4SBW4_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10006223mg PE=4 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.535e-44 Identity = 73/87 (83.91%), Postives = 79/87 (90.80%), Query Frame = 0 Query: 1 MEKHKGGITDFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDEGAALSFKYYQHCFSS 87 MEKHKGGITDF NHDGLSEAVVLHDEDKQLSEVIADRDYAPKE+VWITYGKFPNSTLLLDFGFSLPYNS++E +SF+ +Q C S Sbjct: 1 MEKHKGGITDFFNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEKVWITYGKFPNSTLLLDFGFSLPYNSHNE---VSFE-FQFCVGS 83
BLAST of CMJ_chr8_014790.1 vs. ExPASy TrEMBL
Match: V4TWL2|V4TWL2_CITCL (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10023738mg PE=4 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.017e-38 Identity = 67/88 (76.14%), Postives = 73/88 (82.95%), Query Frame = 0 Query: 9 TDFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDEGAALSFKYYQHCFSSKKESVVLSS 96 DFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYN YDE +SF++ F K V++ + Sbjct: 4 ADFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNIYDE---VSFEFQLCWFLFAKGMVIIQT 88
BLAST of CMJ_chr8_014790.1 vs. ExPASy TrEMBL
Match: A0A2H5QK57|A0A2H5QK57_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_237700 PE=4 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.437e-37 Identity = 66/79 (83.54%), Postives = 70/79 (88.61%), Query Frame = 0 Query: 9 TDFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDEGAALSFKYYQHCFSS 87 DFLNHDGLSEAVVLHDEDKQ SEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLP+NSYDE +SF+ +Q C S Sbjct: 83 ADFLNHDGLSEAVVLHDEDKQFSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPFNSYDE---VSFE-FQFCVGS 157
BLAST of CMJ_chr8_014790.1 vs. ExPASy TrEMBL
Match: A0A2H5NZ30|A0A2H5NZ30_CITUN (SET domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_088990 PE=4 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.214e-34 Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0 Query: 9 TDFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDE 72 DFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKF NSTLLLDFGFSLPYNS+DE Sbjct: 223 ADFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFSNSTLLLDFGFSLPYNSHDE 286
BLAST of CMJ_chr8_014790.1 vs. ExPASy TrEMBL
Match: A0A2H5NZ17|A0A2H5NZ17_CITUN (SET domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_088990 PE=4 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.181e-33 Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0 Query: 9 TDFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDE 72 DFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKF NSTLLLDFGFSLPYNS+DE Sbjct: 247 ADFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFSNSTLLLDFGFSLPYNSHDE 310
BLAST of CMJ_chr8_014790.1 vs. ExPASy TrEMBL
Match: A0A5J5AVG9|A0A5J5AVG9_9ASTE (Rubis-subs-bind domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_031811 PE=4 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 6.718e-31 Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 0 Query: 1 MEKHKGGITDFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDE 72 MEKHKG I DFLNHDG+SE V+L DEDK+LSEVIADR+YAP ++V I YGKF N+ LLLDFGF+LPYN YDE Sbjct: 1 MEKHKGRIPDFLNHDGVSETVLLSDEDKELSEVIADRNYAPGDQVLIRYGKFSNAALLLDFGFTLPYNIYDE 72
BLAST of CMJ_chr8_014790.1 vs. ExPASy TrEMBL
Match: A0A396K206|A0A396K206_MEDTR (Putative histone-lysine N-methyltransferase OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0213141 PE=4 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.352e-27 Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = 0 Query: 1 MEKHKGGITDFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDE 72 M KHKG I+DFLNHDG+SEA+V+ D+D + SEV +DRDY P E+V I YGKF N+TL+LDFGF++PYN YD+ Sbjct: 1 MGKHKGFISDFLNHDGISEAIVMSDDDNKCSEVFSDRDYVPGEQVLIRYGKFSNATLMLDFGFTIPYNIYDQ 72
BLAST of CMJ_chr8_014790.1 vs. Araport11
Match: AT3G55080.5 (| SET domain-containing protein | Chr3:20411476-20414792 REVERSE LENGTH=379 | 201606) HSP 1 Score: 100.138 bits (248), Expect = 2.591e-26 Identity = 42/63 (66.67%), Postives = 54/63 (85.71%), Query Frame = 0 Query: 10 DFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDE 72 DF+NHDGLS ++VL DED QLSEV ADR+Y+P +EV+I YG+F N+TL+LDFGF+ PYN +DE Sbjct: 144 DFMNHDGLSASIVLRDEDNQLSEVTADRNYSPGDEVFIKYGEFSNATLMLDFGFTFPYNIHDE 206
BLAST of CMJ_chr8_014790.1 vs. Araport11
Match: AT3G55080.3 (| SET domain-containing protein | Chr3:20411476-20414792 REVERSE LENGTH=379 | 201606) HSP 1 Score: 100.138 bits (248), Expect = 2.591e-26 Identity = 42/63 (66.67%), Postives = 54/63 (85.71%), Query Frame = 0 Query: 10 DFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDE 72 DF+NHDGLS ++VL DED QLSEV ADR+Y+P +EV+I YG+F N+TL+LDFGF+ PYN +DE Sbjct: 144 DFMNHDGLSASIVLRDEDNQLSEVTADRNYSPGDEVFIKYGEFSNATLMLDFGFTFPYNIHDE 206
BLAST of CMJ_chr8_014790.1 vs. Araport11
Match: AT3G55080.4 (| SET domain-containing protein | Chr3:20411476-20414595 REVERSE LENGTH=348 | 201606) HSP 1 Score: 99.7525 bits (247), Expect = 2.777e-26 Identity = 42/63 (66.67%), Postives = 54/63 (85.71%), Query Frame = 0 Query: 10 DFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDE 72 DF+NHDGLS ++VL DED QLSEV ADR+Y+P +EV+I YG+F N+TL+LDFGF+ PYN +DE Sbjct: 113 DFMNHDGLSASIVLRDEDNQLSEVTADRNYSPGDEVFIKYGEFSNATLMLDFGFTFPYNIHDE 175
BLAST of CMJ_chr8_014790.1 vs. Araport11
Match: AT3G55080.1 (| SET domain-containing protein | Chr3:20411476-20415830 REVERSE LENGTH=463 | 201606) HSP 1 Score: 100.523 bits (249), Expect = 3.351e-26 Identity = 42/63 (66.67%), Postives = 54/63 (85.71%), Query Frame = 0 Query: 10 DFLNHDGLSEAVVLHDEDKQLSEVIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDE 72 DF+NHDGLS ++VL DED QLSEV ADR+Y+P +EV+I YG+F N+TL+LDFGF+ PYN +DE Sbjct: 228 DFMNHDGLSASIVLRDEDNQLSEVTADRNYSPGDEVFIKYGEFSNATLMLDFGFTFPYNIHDE 290
BLAST of CMJ_chr8_014790.1 vs. Araport11
Match: AT3G55080.2 (| SET domain-containing protein | Chr3:20411476-20414595 REVERSE LENGTH=353 | 201606) HSP 1 Score: 93.5893 bits (231), Expect = 6.514e-24 Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 0 Query: 10 DFLNHDGLSEAVVLHDEDKQLSE-----VIADRDYAPKEEVWITYGKFPNSTLLLDFGFSLPYNSYDE 72 DF+NHDGLS ++VL DED QLSE V ADR+Y+P +EV+I YG+F N+TL+LDFGF+ PYN +DE Sbjct: 113 DFMNHDGLSASIVLRDEDNQLSEFSTLQVTADRNYSPGDEVFIKYGEFSNATLMLDFGFTFPYNIHDE 180 The following BLAST results are available for this feature:
BLAST of CMJ_chr8_014790.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr8_014790.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr8_014790.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr8_014790.1_cmj_v1 ID=CMJ_chr8_014790.1_cmj_v1; Name=CMJ_chr8_014790.1; organism=Citrus maxima; type=mRNA; length=303bpback to top protein sequence of CMJ_chr8_014790.1_cmj_v1 >CMJ_chr8_014790.1_cmj_v1 ID=CMJ_chr8_014790.1_cmj_v1; Name=CMJ_chr8_014790.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=101bpback to top mRNA from alignment at chr8:26060788..26062573+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1786bp; location=Sequence derived from: chr8:26060788..26062573+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr8:26060788..26062573+ >CMJ_chr8_014790.1_cmj_v1 ID=CMJ_chr8_014790.1_cmj_v1; Name=CMJ_chr8_014790.1; organism=Citrus maxima; type=CDS; length=303bp; location=Sequence derived from: chr8:26060788..26062573+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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