CMJ_chr8_015830.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of CMJ_chr8_015830.1 vs. ExPASy TrEMBL
Match: V4SHU7|V4SHU7_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10030122mg PE=4 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.519e-55 Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0 Query: 1 MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEEKPLQEEEMSMIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEEKPLQEEEMSMIHERLLKANT+DYGRYDPSPALVKPPFKLIPN
Sbjct: 1 MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEEKPLQEEEMSMIHERLLKANTQDYGRYDPSPALVKPPFKLIPN 89
BLAST of CMJ_chr8_015830.1 vs. ExPASy TrEMBL
Match: A0A067E9H1|A0A067E9H1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034622mg PE=4 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.519e-55 Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0 Query: 1 MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEEKPLQEEEMSMIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEEKPLQEEEMSMIHERLLKANT+DYGRYDPSPALVKPPFKLIPN
Sbjct: 1 MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEEKPLQEEEMSMIHERLLKANTQDYGRYDPSPALVKPPFKLIPN 89
BLAST of CMJ_chr8_015830.1 vs. ExPASy TrEMBL
Match: A0A2H5QTI9|A0A2H5QTI9_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_260310 PE=4 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.692e-54 Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0 Query: 1 MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEEKPLQEEEMSMIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEEKPLQEEEMS IHERLLKANTKDYGRYDPSPALVKPPFKLIPN
Sbjct: 1 MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEEKPLQEEEMSTIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
BLAST of CMJ_chr8_015830.1 vs. ExPASy TrEMBL
Match: W9S1U0|W9S1U0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008744 PE=4 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.249e-34 Identity = 57/93 (61.29%), Postives = 76/93 (81.72%), Query Frame = 0 Query: 1 MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEE----KPLQEEEMSMIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
MG +++KKI LLFLLI+ SLLSTSLA R + S +K ++ VD+T +E KP+ +E++++HERLL+ANTKDYG+YDP+PALVKPPFKLIPN
Sbjct: 1 MGRMVVKKIGLLFLLIAGSLLSTSLAGRQLINSANKFSKAVDATLDEEMLRKPMNHKEIAIVHERLLRANTKDYGKYDPAPALVKPPFKLIPN 93
BLAST of CMJ_chr8_015830.1 vs. ExPASy TrEMBL
Match: B9HRJ9|B9HRJ9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G119900 PE=4 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.547e-34 Identity = 67/95 (70.53%), Postives = 75/95 (78.95%), Query Frame = 0 Query: 1 MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVD---STFEE---KPLQEEEMSMIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
MGL+LLKKISLLFLLISAS LSTS A R SKSV+KLAE V+ +T+EE KP E + IHERLLKANTKDYG Y P+PALV+PPFKLIPN
Sbjct: 1 MGLMLLKKISLLFLLISASFLSTSFAGRR-SKSVNKLAEEVEVSAATYEEISSKPSHNNEATTIHERLLKANTKDYGNYKPAPALVRPPFKLIPN 94
BLAST of CMJ_chr8_015830.1 vs. ExPASy TrEMBL
Match: A0A314UG05|A0A314UG05_PRUYE (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_26936 PE=4 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.085e-33 Identity = 62/92 (67.39%), Postives = 70/92 (76.09%), Query Frame = 0 Query: 1 MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEE---KPLQEEEMSMIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
MG + K S+LFLLISAS LS S A SK V+KLA+ VD+ EE KPL +E +MIHERLLKANTKDYGRYDP+PALVKPPFKLIPN
Sbjct: 1 MGFMFFNKFSILFLLISASFLSASFAAGRSSKFVNKLAKEVDAIPEETLGKPLNHKEAAMIHERLLKANTKDYGRYDPAPALVKPPFKLIPN 92
BLAST of CMJ_chr8_015830.1 vs. ExPASy TrEMBL
Match: A0A6J5VLW1|A0A6J5VLW1_PRUAR (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS49992 PE=4 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.022e-32 Identity = 60/92 (65.22%), Postives = 70/92 (76.09%), Query Frame = 0 Query: 1 MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEE---KPLQEEEMSMIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
MG + K S+LFLLISAS LS S A SK V+KLA+ VD+ EE KPL +E ++IHERLLKANT+DYGRYDP+PALVKPPFKLIPN
Sbjct: 1 MGFMFFNKFSILFLLISASFLSASFAAGRSSKFVNKLAQEVDAIPEETLGKPLNHKEAAIIHERLLKANTRDYGRYDPAPALVKPPFKLIPN 92
BLAST of CMJ_chr8_015830.1 vs. ExPASy TrEMBL
Match: M5VMD3|M5VMD3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G091200 PE=4 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.749e-32 Identity = 59/92 (64.13%), Postives = 70/92 (76.09%), Query Frame = 0 Query: 1 MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEE---KPLQEEEMSMIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
MG + K S+LFLLISAS LS S A SK V+KLAE VD+ EE +PL +E ++IHERLL+ANT+DYGRYDP+PALVKPPFKLIPN
Sbjct: 1 MGFMFFNKFSILFLLISASFLSASFAAGRSSKFVNKLAEEVDAIPEETLGRPLNHKEAAIIHERLLRANTRDYGRYDPAPALVKPPFKLIPN 92
BLAST of CMJ_chr8_015830.1 vs. ExPASy TrEMBL
Match: A0A5N5I5Y4|A0A5N5I5Y4_9ROSA (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_026119 PE=4 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.929e-32 Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 0 Query: 1 MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEE---KPLQEEEMSMIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
M + LKK S+LFLLISAS LST+ A S V+K A+ +D+T EE KPL +E++ IHERLL+ANTKDYGRYDP+PALVKPPFKLIPN
Sbjct: 1 MAFMFLKKFSILFLLISASFLSTAFAAGRKSMFVNKFAKEMDATTEEMLGKPLNHKEVARIHERLLRANTKDYGRYDPAPALVKPPFKLIPN 92
BLAST of CMJ_chr8_015830.1 vs. ExPASy TrEMBL
Match: A0A6J5Y2X9|A0A6J5Y2X9_PRUAR (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS49304 PE=4 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 4.442e-32 Identity = 59/92 (64.13%), Postives = 70/92 (76.09%), Query Frame = 0 Query: 1 MGLLLLKKISLLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEE---KPLQEEEMSMIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
MG + K S+LFLLISAS LS S A SK V+KLA+ VD+ EE KPL +E ++IHERLL+ANT+DYGRYDP+PALVKPPFKLIPN
Sbjct: 1 MGFMFFNKFSILFLLISASFLSASFAAGRSSKFVNKLAKEVDAIPEETLGKPLNHKEAAIIHERLLRANTRDYGRYDPAPALVKPPFKLIPN 92
BLAST of CMJ_chr8_015830.1 vs. ExPASy Swiss-Prot
Match: CIF1_ARATH (Protein CASPARIAN STRIP INTEGRITY FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=CIF1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.096e-17 Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 0 Query: 1 MGLLLLKKISLLFLLISASLLSTSLADRG---ISKSVSKLAEGVDSTFEEKPLQEEEMSMIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
M L +KK+ +F+++SAS LS S A R + K ++ E V+ + E HERLL+ NTKDYG PSP L +PPFKLIPN
Sbjct: 3 MSPLTVKKLGFIFMIVSASALSVSFAGRPSIFVHKKINLREEMVERSMHE-----------HERLLRMNTKDYGNNSPSPRLERPPFKLIPN 83
BLAST of CMJ_chr8_015830.1 vs. ExPASy Swiss-Prot
Match: CIF2_ARATH (Protein CASPARIAN STRIP INTEGRITY FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=CIF2 PE=1 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.900e-12 Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 0 Query: 1 MGLL-LLKKIS-LLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEEKPLQEEEMSMIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
MGLL L+KK+ ++FLL+SAS + A R + + S ++ P E HER+L+ N++DYG P P LV+PPFKLIPN
Sbjct: 1 MGLLPLVKKLGFIIFLLVSASAFALCSAGRS--------SILIYSQEDDHPEVVERRIHEHERILRMNSRDYGHSSPKPKLVRPPFKLIPN 83
BLAST of CMJ_chr8_015830.1 vs. Araport11
Match: AT2G16385.1 (| aspartate carbamoyltransferase | Chr2:7094882-7095557 FORWARD LENGTH=83 | 201606) HSP 1 Score: 71.2478 bits (173), Expect = 9.306e-18 Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 0 Query: 1 MGLLLLKKISLLFLLISASLLSTSLADRG---ISKSVSKLAEGVDSTFEEKPLQEEEMSMIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
M L +KK+ +F+++SAS LS S A R + K ++ E V+ + E HERLL+ NTKDYG PSP L +PPFKLIPN
Sbjct: 3 MSPLTVKKLGFIFMIVSASALSVSFAGRPSIFVHKKINLREEMVERSMHE-----------HERLLRMNTKDYGNNSPSPRLERPPFKLIPN 83
BLAST of CMJ_chr8_015830.1 vs. Araport11
Match: AT4G34600.1 (| transmembrane protein | Chr4:16529280-16529958 FORWARD LENGTH=83 | 201606) HSP 1 Score: 60.077 bits (144), Expect = 1.944e-13 Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 0 Query: 1 MGLL-LLKKIS-LLFLLISASLLSTSLADRGISKSVSKLAEGVDSTFEEKPLQEEEMSMIHERLLKANTKDYGRYDPSPALVKPPFKLIPN 89
MGLL L+KK+ ++FLL+SAS + A R + + S ++ P E HER+L+ N++DYG P P LV+PPFKLIPN
Sbjct: 1 MGLLPLVKKLGFIIFLLVSASAFALCSAGRS--------SILIYSQEDDHPEVVERRIHEHERILRMNSRDYGHSSPKPKLVRPPFKLIPN 83 The following BLAST results are available for this feature:
BLAST of CMJ_chr8_015830.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr8_015830.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 2 Position : 0 Zoom : x 1
BLAST of CMJ_chr8_015830.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr8_015830.1_cmj_v1 ID=CMJ_chr8_015830.1_cmj_v1; Name=CMJ_chr8_015830.1; organism=Citrus maxima; type=mRNA; length=270bpback to top protein sequence of CMJ_chr8_015830.1_cmj_v1 >CMJ_chr8_015830.1_cmj_v1 ID=CMJ_chr8_015830.1_cmj_v1; Name=CMJ_chr8_015830.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=90bpback to top mRNA from alignment at chr8:28515157..28516131- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=975bp; location=Sequence derived from: chr8:28515157..28516131- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr8:28515157..28516131- >CMJ_chr8_015830.1_cmj_v1 ID=CMJ_chr8_015830.1_cmj_v1; Name=CMJ_chr8_015830.1; organism=Citrus maxima; type=CDS; length=270bp; location=Sequence derived from: chr8:28515157..28516131- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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