CMJ_chr8_018510.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr8_018510.1 vs. ExPASy TrEMBL
Match: A0A067E1M7|A0A067E1M7_CITSI (Phytocyanin domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g037561mg PE=4 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.276e-58 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 Query: 1 MAFTSAHSLILILSAASMLTVSMANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL 92 MAFTSAHSLILILSAASMLTVSMANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL Sbjct: 1 MAFTSAHSLILILSAASMLTVSMANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL 92
BLAST of CMJ_chr8_018510.1 vs. ExPASy TrEMBL
Match: V4RPI0|V4RPI0_CITCL (Phytocyanin domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10029852mg PE=4 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 8.768e-58 Identity = 90/92 (97.83%), Postives = 92/92 (100.00%), Query Frame = 0 Query: 1 MAFTSAHSLILILSAASMLTVSMANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL 92 MAFTSAHSLILILSAASMLTVS+ANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQN+PFYVNDVL Sbjct: 1 MAFTSAHSLILILSAASMLTVSLANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNSPFYVNDVL 92
BLAST of CMJ_chr8_018510.1 vs. ExPASy TrEMBL
Match: A0A2H5Q0V4|A0A2H5Q0V4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_185290 PE=4 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.544e-46 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 Query: 16 ASMLTVSMANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL 92 ASMLTVSMANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL Sbjct: 218 ASMLTVSMANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL 294 HSP 2 Score: 144.821 bits (364), Expect = 9.600e-40 Identity = 73/92 (79.35%), Postives = 77/92 (83.70%), Query Frame = 0 Query: 1 MAFTSAHSLILILSAASMLTVSMANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL 92 MAF +AHSL +ILSAASMLTV ANRGWS GFN TY WPWG N S SNNTN DDDGP KI+VGGSDNW FGFNYSVWAF+NAPFYVNDVL Sbjct: 1 MAFKAAHSLFVILSAASMLTVCSANRGWSNGFNKTYQWPWGHKNESHNSNNTN-DDDGPKKIIVGGSDNWRFGFNYSVWAFKNAPFYVNDVL 91
BLAST of CMJ_chr8_018510.1 vs. ExPASy TrEMBL
Match: V4UAL1|V4UAL1_CITCL (Phytocyanin domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10029789mg PE=4 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.266e-42 Identity = 73/92 (79.35%), Postives = 78/92 (84.78%), Query Frame = 0 Query: 1 MAFTSAHSLILILSAASMLTVSMANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL 92 MAF +AHSL++ILSAASML V ANRGWS GFNNTY WPWG N S SNNTN DDDGP KI+VGGSDNW FGFNYSVWAF+NAPFYVNDVL Sbjct: 1 MAFKAAHSLLVILSAASMLAVCSANRGWSNGFNNTYQWPWGHKNESHNSNNTN-DDDGPKKIIVGGSDNWRFGFNYSVWAFKNAPFYVNDVL 91
BLAST of CMJ_chr8_018510.1 vs. ExPASy TrEMBL
Match: V4SBV5|V4SBV5_CITCL (Phytocyanin domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10029377mg PE=4 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.385e-42 Identity = 73/92 (79.35%), Postives = 77/92 (83.70%), Query Frame = 0 Query: 1 MAFTSAHSLILILSAASMLTVSMANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL 92 MAF +AHSL +ILSAASMLTV ANRGWS GFN TY WPWG N S SNNTN DDDGP KI+VGGSDNW FGFNYSVWAF+NAPFYVNDVL Sbjct: 1 MAFKAAHSLFVILSAASMLTVCSANRGWSNGFNKTYQWPWGHKNESHNSNNTN-DDDGPKKIIVGGSDNWRFGFNYSVWAFKNAPFYVNDVL 91
BLAST of CMJ_chr8_018510.1 vs. ExPASy TrEMBL
Match: A0A2H5Q0X0|A0A2H5Q0X0_CITUN (Phytocyanin domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_185290 PE=4 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.421e-42 Identity = 73/92 (79.35%), Postives = 77/92 (83.70%), Query Frame = 0 Query: 1 MAFTSAHSLILILSAASMLTVSMANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL 92 MAF +AHSL +ILSAASMLTV ANRGWS GFN TY WPWG N S SNNTN DDDGP KI+VGGSDNW FGFNYSVWAF+NAPFYVNDVL Sbjct: 1 MAFKAAHSLFVILSAASMLTVCSANRGWSNGFNKTYQWPWGHKNESHNSNNTN-DDDGPKKIIVGGSDNWRFGFNYSVWAFKNAPFYVNDVL 91
BLAST of CMJ_chr8_018510.1 vs. ExPASy TrEMBL
Match: A0A2H5MWY3|A0A2H5MWY3_CITUN (Phytocyanin domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_273900 PE=4 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.986e-42 Identity = 73/92 (79.35%), Postives = 78/92 (84.78%), Query Frame = 0 Query: 1 MAFTSAHSLILILSAASMLTVSMANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL 92 MAF +AHSL++ILSAASML V ANRGWS GFNNTY WPWG N S SNNT DDDGP+KI+VGGSDNW FGFNYSVWAFQNAPFYVNDVL Sbjct: 1 MAFKAAHSLLVILSAASMLAVCSANRGWSNGFNNTYQWPWGHKNESHNSNNTT-DDDGPNKIIVGGSDNWRFGFNYSVWAFQNAPFYVNDVL 91
BLAST of CMJ_chr8_018510.1 vs. ExPASy TrEMBL
Match: A0A2H5MYE8|A0A2H5MYE8_CITUN (Phytocyanin domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_273890 PE=4 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.726e-40 Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 0 Query: 1 MAFTSAHSLILILSAASMLTVSMANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL 92 MAF +AHSL +ILSAASMLTV ANRGWS G N TY WPWG N S S+NTN DD+GP+KI+VGGSDNW FGFNYSVWAF+NAPFYVNDVL Sbjct: 1 MAFKAAHSLFVILSAASMLTVCSANRGWSNGLNKTYQWPWGHKNESHNSSNTN-DDNGPNKIIVGGSDNWRFGFNYSVWAFKNAPFYVNDVL 91
BLAST of CMJ_chr8_018510.1 vs. ExPASy TrEMBL
Match: V4SH20|V4SH20_CITCL (Phytocyanin domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10030287mg PE=4 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 6.188e-40 Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 0 Query: 1 MAFTSAHSLILILSAASMLTVSMANRGWSYGFNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL 92 MAF +AHSL +ILSAASMLTV ANRGWS G N TY WPWG N S S+NTN DD+GP+KI+VGGSDNW FGFNYSVWAF+NAPFYVNDVL Sbjct: 1 MAFKAAHSLFVILSAASMLTVCSANRGWSNGLNKTYQWPWGHKNESHNSSNTN-DDNGPNKIIVGGSDNWRFGFNYSVWAFKNAPFYVNDVL 91
BLAST of CMJ_chr8_018510.1 vs. ExPASy TrEMBL
Match: A0A5C7I683|A0A5C7I683_9ROSI (Phytocyanin domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_011373 PE=4 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.622e-29 Identity = 62/95 (65.26%), Postives = 72/95 (75.79%), Query Frame = 0 Query: 1 MAFTSAHSLILILSAASML-TVSMANRGWSYG--FNNTYYWPWGPNNGSPGSNNTNDDDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL 92 + + SLILI++AASML TVS+ANR W YG FN T +WPWGP N S NNTN P+KI+VGGSD+WH+GFNYSVWAFQN PFYVNDVL Sbjct: 4 IGVSDHRSLILIVAAASMLVTVSVANRDWYYGGGFNYTTHWPWGPRNDSHSLNNTNV----PNKIIVGGSDHWHYGFNYSVWAFQNNPFYVNDVL 94
BLAST of CMJ_chr8_018510.1 vs. Araport11
Match: AT2G15770.1 (| Cupredoxin superfamily protein | Chr2:6871257-6872245 REVERSE LENGTH=301 | 201606) HSP 1 Score: 55.4546 bits (132), Expect = 3.196e-10 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0 Query: 24 ANRGWSYGFNNTYYWPWGPNNGSPGSNNTND----DDDGPSKIVVGGSDNWHFGFNYSVWAFQNAPFYVNDVL 92 + R W++ + + W WG N+ S+ ++ D + P KI+VGGSD W G +Y WA +NAPFYVNDVL Sbjct: 104 SRRSWNWSLKSGWSWSWGSNDNDSNSSGSDSGSGLDRETPKKIIVGGSDGWKKGLDYKDWASKNAPFYVNDVL 176 The following BLAST results are available for this feature:
BLAST of CMJ_chr8_018510.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr8_018510.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr8_018510.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 1 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr8_018510.1_cmj_v1 ID=CMJ_chr8_018510.1_cmj_v1; Name=CMJ_chr8_018510.1; organism=Citrus maxima; type=mRNA; length=297bpback to top protein sequence of CMJ_chr8_018510.1_cmj_v1 >CMJ_chr8_018510.1_cmj_v1 ID=CMJ_chr8_018510.1_cmj_v1; Name=CMJ_chr8_018510.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=99bpback to top mRNA from alignment at chr8:30722449..30722792+ Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=344bp; location=Sequence derived from: chr8:30722449..30722792+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr8:30722449..30722792+ >CMJ_chr8_018510.1_cmj_v1 ID=CMJ_chr8_018510.1_cmj_v1; Name=CMJ_chr8_018510.1; organism=Citrus maxima; type=CDS; length=297bp; location=Sequence derived from: chr8:30722449..30722792+ (Citrus maximaback to top |