CMJ_chr8_018950.2
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr8_018950.2 vs. ExPASy TrEMBL
Match: A0A067DLN2|A0A067DLN2_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028984mg PE=4 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 6.141e-119 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0 Query: 1 MEDCTKSTKRIAGNVVKTGEEAAAAVEAEASNASLSSKKTKLTSQEVKLPSLENGDSFVVSPHKTSSTSDSVSENFSTSRSSSDDVIKSADLKATSFETEVSTCNNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK 175
MEDCTKSTKRIAGNVVKTGEEAAAAVEAEASNASLSSKKTKLTSQEVKLPSLENGDSFVVSPHKTSSTSDSVSENFSTSRSSSDDVIKSADLKATSFETEVSTCNNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK
Sbjct: 1 MEDCTKSTKRIAGNVVKTGEEAAAAVEAEASNASLSSKKTKLTSQEVKLPSLENGDSFVVSPHKTSSTSDSVSENFSTSRSSSDDVIKSADLKATSFETEVSTCNNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK 175
BLAST of CMJ_chr8_018950.2 vs. ExPASy TrEMBL
Match: A0A067DHL4|A0A067DHL4_CITSI (Cyclin-dependent kinase inhibitor OS=Citrus sinensis OX=2711 GN=CISIN_1g028984mg PE=3 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 9.031e-119 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0 Query: 1 MEDCTKSTKRIAGNVVKTGEEAAAAVEAEASNASLSSKKTKLTSQEVKLPSLENGDSFVVSPHKTSSTSDSVSENFSTSRSSSDDVIKSADLKATSFETEVSTCNNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK 175
MEDCTKSTKRIAGNVVKTGEEAAAAVEAEASNASLSSKKTKLTSQEVKLPSLENGDSFVVSPHKTSSTSDSVSENFSTSRSSSDDVIKSADLKATSFETEVSTCNNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK
Sbjct: 1 MEDCTKSTKRIAGNVVKTGEEAAAAVEAEASNASLSSKKTKLTSQEVKLPSLENGDSFVVSPHKTSSTSDSVSENFSTSRSSSDDVIKSADLKATSFETEVSTCNNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK 175
BLAST of CMJ_chr8_018950.2 vs. ExPASy TrEMBL
Match: A0A2H5PR76|A0A2H5PR76_CITUN (Cyclin-dependent kinase inhibitor OS=Citrus unshiu OX=55188 GN=CUMW_160030 PE=3 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 9.140e-118 Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0 Query: 1 MEDCTKSTKRIAGNVVKTGEEAAAAVEAEASNASLSSKKTKLTSQEVKLPSLENGDSFVVSPHKTSSTSDSVSENFSTSRSSSDDVIKSADLKATSFETEVSTCNNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK 175
MEDCTKSTKRIAGNVVKTGEEAA AVEAEASNASLSSKKTKLTSQEVKLPSLENGDSFVVSPHKTSSTSDSVSENFSTSRSSSDDVIKSADLKATSFETEVSTCNNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK
Sbjct: 1 MEDCTKSTKRIAGNVVKTGEEAAPAVEAEASNASLSSKKTKLTSQEVKLPSLENGDSFVVSPHKTSSTSDSVSENFSTSRSSSDDVIKSADLKATSFETEVSTCNNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK 175
BLAST of CMJ_chr8_018950.2 vs. ExPASy TrEMBL
Match: V4SH04|V4SH04_CITCL (Cyclin-dependent kinase inhibitor OS=Citrus clementina OX=85681 GN=CICLE_v10029306mg PE=3 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 6.511e-117 Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0 Query: 1 MEDCTKSTKRIAGNVVKTGEEAAAAVEAEASNASLSSKKTKLTSQEVKLPSLENGDSFVVSPHKTSSTSDSVSENFSTSRSSSDDVIKSADLKATSFETEVSTCNNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK 175
MEDCTKSTKRIAGNVVKTGEEAA AVEAEASNASLSSKKTKLTSQEVKLPSLENGDSFVVSPHKTSSTSDSVSEN STSRSSSDDVIKSADLKATSFETEVSTCNNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK
Sbjct: 1 MEDCTKSTKRIAGNVVKTGEEAAPAVEAEASNASLSSKKTKLTSQEVKLPSLENGDSFVVSPHKTSSTSDSVSENLSTSRSSSDDVIKSADLKATSFETEVSTCNNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK 175
BLAST of CMJ_chr8_018950.2 vs. ExPASy TrEMBL
Match: A0A5C7I770|A0A5C7I770_9ROSI (Cyclin-dependent kinase inhibitor OS=Acer yangbiense OX=1000413 GN=EZV62_011330 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 7.748e-38 Identity = 96/189 (50.79%), Postives = 120/189 (63.49%), Query Frame = 0 Query: 1 MEDCTKSTKRIAGNVVKTGEEAAAAVEAEASNASLSSKKTKL-TSQEVK--LPSLENGDSFVVSPHK--TSSTSDSVSENFSTSRSSSD---DVIKS----ADLKATSFETEVSTCNNKFSKEETSPLSEICGDSEDQTSMDK--PSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK 175
M DCTK +KRIAG A +E EAS+ +LS K+TK TSQ++K PS D VVS HK TSS+ S+ FS SR SS+ +++K ADL+ SFETEVSTCNN ETSP SEICGDSE+ +SMD P PP S RR+ S E K+P++AEID+FF+ AE+ EQ+ FAEK
Sbjct: 1 MGDCTKKSKRIAG---------ALEMEEEASSTNLSPKRTKFSTSQQLKESKPSTTTNDVVVVSTHKKMTSSSGFVFSDEFSASRCSSNGSLEIVKHSLIFADLEVASFETEVSTCNNNNKFRETSPSSEICGDSEEISSMDHSTPKNQPPGS-RRRISPEGTKMPTSAEIDDFFSKAERNEQKLFAEK 179
BLAST of CMJ_chr8_018950.2 vs. ExPASy TrEMBL
Match: A0A6P4N569|A0A6P4N569_GOSAR (Cyclin-dependent kinase inhibitor OS=Gossypium arboreum OX=29729 GN=LOC108463226 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.256e-25 Identity = 86/206 (41.75%), Postives = 115/206 (55.83%), Query Frame = 0 Query: 1 MEDCTKSTKRIAGNVVKTGEEAAAAVEAEASNASLSSKKTKLTS---QEVKL--PSLENGDSFVVS-----PHKTSSTSDSV------------SENFSTSRSSSD-------DVIKSADLKATSFETEVSTCNN--KFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK 175
M DC ++ KR A AA +EA ++N SLS ++ + S QE++L P +E G + ++S P +++SDS S S SR SS+ D ++ DL+A SFETE+STC N KFS+E TSPLSE CGDS++ M P K PP + + P KIPS AEIDEFF+ AEK EQ+RFAEK
Sbjct: 1 MGDCIRNCKRSA---------EAAEMEASSTNFSLSKRRKTVGSRELQELELTSPDIELGTTRILSNTLNKPIYLATSSDSCGVLTGDMCSGLFSGASSASRCSSNESCDILKDSLRFVDLEAKSFETEISTCTNVNKFSRE-TSPLSEHCGDSDE---MQSPEKKPPLTTTKPP-----KIPSQAEIDEFFSVAEKYEQKRFAEK 188
BLAST of CMJ_chr8_018950.2 vs. ExPASy TrEMBL
Match: A0A5D2DWI6|A0A5D2DWI6_GOSDA (Cyclin-dependent kinase inhibitor OS=Gossypium darwinii OX=34276 GN=ES288_A13G040800v1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.365e-24 Identity = 86/206 (41.75%), Postives = 115/206 (55.83%), Query Frame = 0 Query: 1 MEDCTKSTKRIAGNVVKTGEEAAAAVEAEASNASLSSKKTKLTS---QEVKL--PSLENGDSFVVS-----PHKTSSTSDSV------------SENFSTSRSSSD-------DVIKSADLKATSFETEVSTCNN--KFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK 175
M DC ++ KR A AA +EA ++N SLS ++ + S QE++L P +E G + ++S P +++SDS S STSR SS+ D ++ DL+A SFETE+STC N KFS+E TSPLSE C DS++ M P K PP + + P KIPS AEIDEFF+ AEK EQ+RFAEK
Sbjct: 1 MGDCIRNCKRSA---------EAAEMEASSTNFSLSKRRKTVGSRELQELELTSPDIELGTTRILSNTLNKPIYLATSSDSCGVLTGDMCSGLFSGASSTSRCSSNESCDILKDSLRFVDLEAKSFETEISTCTNVNKFSRE-TSPLSEHCRDSDE---MQSPEKKPPLTTTKPP-----KIPSQAEIDEFFSVAEKYEQKRFAEK 188
BLAST of CMJ_chr8_018950.2 vs. ExPASy TrEMBL
Match: A0A5D2MFZ8|A0A5D2MFZ8_GOSTO (Cyclin-dependent kinase inhibitor OS=Gossypium tomentosum OX=34277 GN=ES332_A13G044400v1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.365e-24 Identity = 86/206 (41.75%), Postives = 115/206 (55.83%), Query Frame = 0 Query: 1 MEDCTKSTKRIAGNVVKTGEEAAAAVEAEASNASLSSKKTKLTS---QEVKL--PSLENGDSFVVS-----PHKTSSTSDSV------------SENFSTSRSSSD-------DVIKSADLKATSFETEVSTCNN--KFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK 175
M DC ++ KR A AA +EA ++N SLS ++ + S QE++L P +E G + ++S P +++SDS S STSR SS+ D ++ DL+A SFETE+STC N KFS+E TSPLSE C DS++ M P K PP + + P KIPS AEIDEFF+ AEK EQ+RFAEK
Sbjct: 1 MGDCIRNCKRSA---------EAAEMEASSTNFSLSKRRKTVGSRELQELELTSPDIELGTTRILSNTLNKPIYLATSSDSCGVLTGDMCSGLFSGASSTSRCSSNESCDILKDSLRFVDLEAKSFETEISTCTNVNKFSRE-TSPLSEHCRDSDE---MQSPEKKPPLTTTKPP-----KIPSQAEIDEFFSVAEKYEQKRFAEK 188
BLAST of CMJ_chr8_018950.2 vs. ExPASy TrEMBL
Match: A0A2P5XPW4|A0A2P5XPW4_GOSBA (Cyclin-dependent kinase inhibitor OS=Gossypium barbadense OX=3634 GN=ES319_A13G042000v1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.365e-24 Identity = 86/206 (41.75%), Postives = 115/206 (55.83%), Query Frame = 0 Query: 1 MEDCTKSTKRIAGNVVKTGEEAAAAVEAEASNASLSSKKTKLTS---QEVKL--PSLENGDSFVVS-----PHKTSSTSDSV------------SENFSTSRSSSD-------DVIKSADLKATSFETEVSTCNN--KFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK 175
M DC ++ KR A AA +EA ++N SLS ++ + S QE++L P +E G + ++S P +++SDS S STSR SS+ D ++ DL+A SFETE+STC N KFS+E TSPLSE C DS++ M P K PP + + P KIPS AEIDEFF+ AEK EQ+RFAEK
Sbjct: 1 MGDCIRNCKRSA---------EAAEMEASSTNFSLSKRRKTVGSRELQELELTSPDIELGTTRILSNTLNKPIYLATSSDSCGVLTGDMCSGLFSGASSTSRCSSNESCDILKDSLRFVDLEAKSFETEISTCTNVNKFSRE-TSPLSEHCRDSDE---MQSPEKKPPLTTTKPP-----KIPSQAEIDEFFSVAEKYEQKRFAEK 188
BLAST of CMJ_chr8_018950.2 vs. ExPASy TrEMBL
Match: A0A5D1ZV25|A0A5D1ZV25_GOSDA (Cyclin-dependent kinase inhibitor OS=Gossypium darwinii OX=34276 GN=ES288_D13G043600v1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 4.070e-24 Identity = 85/206 (41.26%), Postives = 115/206 (55.83%), Query Frame = 0 Query: 1 MEDCTKSTKRIAGNVVKTGEEAAAAVEAEASNASLSSKKTKLTS---QEVKL--PSLENGDSFVVS-----PHKTSSTSDSV------------SENFSTSRSSSD-------DVIKSADLKATSFETEVSTCNN--KFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEK 175
M DC ++ KR A AA +EA +++ SLS ++ + S QE++L P +E G + ++S P +++S S S N S SR SS+ D ++ DL+A SFETE+STC N KFS+E T PLSE CGDS++ M P K PP S ++E KIPS AEIDEFF+ AEK EQ+RFAEK
Sbjct: 1 MGDCMRNCKRSA---------EAAEMEASSTSFSLSKRRKTVGSRELQELELTSPDIELGTTRILSNSLNKPIYLATSSGSCGVLAGDMCSGLFSGNSSASRCSSNESCDILKDSLRFVDLEAKSFETEISTCTNVNKFSRE-TPPLSEHCGDSDE---MQSPEKKPPPS-----TTEPPKIPSQAEIDEFFSVAEKYEQKRFAEK 188 The following BLAST results are available for this feature:
BLAST of CMJ_chr8_018950.2 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr8_018950.2 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CMJ_chr8_018950.2 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr8_018950.2_cmj_v1 ID=CMJ_chr8_018950.2_cmj_v1; Name=CMJ_chr8_018950.2; organism=Citrus maxima; type=mRNA; length=528bpback to top protein sequence of CMJ_chr8_018950.2_cmj_v1 >CMJ_chr8_018950.2_cmj_v1 ID=CMJ_chr8_018950.2_cmj_v1; Name=CMJ_chr8_018950.2_cmj_v1; organism=Citrus maxima; type=polypeptide; length=176bpback to top mRNA from alignment at chr8:31034918..31037036+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2119bp; location=Sequence derived from: chr8:31034918..31037036+ (Citrus maximaback to top Coding sequence (CDS) from alignment at chr8:31034918..31037036+ >CMJ_chr8_018950.2_cmj_v1 ID=CMJ_chr8_018950.2_cmj_v1; Name=CMJ_chr8_018950.2; organism=Citrus maxima; type=CDS; length=528bp; location=Sequence derived from: chr8:31034918..31037036+ (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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