CMJ_chr9_017590.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CMJ_chr9_017590.1 vs. ExPASy TrEMBL
Match: A0A067L843|A0A067L843_JATCU (Epidermal patterning factor-like protein OS=Jatropha curcas OX=180498 GN=JCGZ_02227 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 4.141e-33 Identity = 60/82 (73.17%), Postives = 64/82 (78.05%), Query Frame = 0 Query: 90 LDDNRKNNINSECVAGVPAPD--LRLKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
L + + E G+ A D L KR+SGPGSSPPTCRSKCGRC PCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP
Sbjct: 32 LGNGFQKREEGEKGRGLKAFDRVLTQKRLSGPGSSPPTCRSKCGRCLPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 113
BLAST of CMJ_chr9_017590.1 vs. ExPASy TrEMBL
Match: A0A2R6RV01|A0A2R6RV01_ACTCC (Epidermal patterning factor-like protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04240 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 4.188e-33 Identity = 64/128 (50.00%), Postives = 78/128 (60.94%), Query Frame = 0 Query: 48 LNATKPHQLLCSTRDVASPPAALFLHCLHIPLLRPNPTRYVSLDDNRKNNINS------ECVAGVPAPDLRLKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
+ + HQ L +A+ A FL L +PTR + + + + E A V + +R+ GPGSSPPTCRSKCGRC PC+PVHVPIQPGL+MPLEYYPEAWRCKCGNKLFMP
Sbjct: 1 MGVVRNHQRL----SLAAVTALAFLLFASASALSLSPTRQLGGREREEREASKITTSEREEAAFVSGQVVARRRLGGPGSSPPTCRSKCGRCGPCRPVHVPIQPGLTMPLEYYPEAWRCKCGNKLFMP 124
BLAST of CMJ_chr9_017590.1 vs. ExPASy TrEMBL
Match: A0A2H5PP20|A0A2H5PP20_CITUN (Epidermal patterning factor-like protein OS=Citrus unshiu OX=55188 GN=CUMW_154070 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 4.827e-33 Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0 Query: 111 LRLKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
L KRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP
Sbjct: 37 LDQKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 95
BLAST of CMJ_chr9_017590.1 vs. ExPASy TrEMBL
Match: A0A5J5BZU3|A0A5J5BZU3_9ASTE (Epidermal patterning factor-like protein OS=Nyssa sinensis OX=561372 GN=F0562_000367 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 7.377e-33 Identity = 62/109 (56.88%), Postives = 70/109 (64.22%), Query Frame = 0 Query: 62 DVASPPAALFLHCLHIPLLRPNPTRYVSLDDNR-KNNINSECVAGVPAPDLRLKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
VA+ A FL + + NPTR + + G L +R GPGSSPPTCRSKCG+CSPCKPVHVPIQPGLS+PLEYYPEAWRCKCGNKLFMP
Sbjct: 16 SVATLTALTFLFFASVSAVTLNPTRQLGGGVREVREEAKRASGWGFFGRVLTQRRFGGPGSSPPTCRSKCGKCSPCKPVHVPIQPGLSIPLEYYPEAWRCKCGNKLFMP 124
BLAST of CMJ_chr9_017590.1 vs. ExPASy TrEMBL
Match: B9RTK3|B9RTK3_RICCO (Epidermal patterning factor-like protein OS=Ricinus communis OX=3988 GN=RCOM_0911080 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.592e-32 Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 0 Query: 111 LRLKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
L KR+ GPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP
Sbjct: 60 LSQKRLGGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 118
BLAST of CMJ_chr9_017590.1 vs. ExPASy TrEMBL
Match: A0A067GGG8|A0A067GGG8_CITSI (Epidermal patterning factor-like protein OS=Citrus sinensis OX=2711 GN=CISIN_1g038899mg PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.587e-32 Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0 Query: 111 LRLKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
L KRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRC CGNKLFMP
Sbjct: 37 LDQKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCNCGNKLFMP 95
BLAST of CMJ_chr9_017590.1 vs. ExPASy TrEMBL
Match: A0A6I9SVJ9|A0A6I9SVJ9_SESIN (Epidermal patterning factor-like protein OS=Sesamum indicum OX=4182 GN=LOC105158403 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.080e-32 Identity = 63/106 (59.43%), Postives = 71/106 (66.98%), Query Frame = 0 Query: 64 ASPPAALFLHCLHIPLLRPNPTRYVSLDDNRKNNINSECVAGVPAPDLRLKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
+S A L + L NPTR+ RK I E A + +R+ GPGSSPPTCRSKCGRC+PCKPVHVPIQPG SMPLEYYPEAWRCKCG+KLFMP
Sbjct: 13 SSATVAFLLLIASVSALAHNPTRHFLSVGVRK--IREEVAA---EGLMARRRLGGPGSSPPTCRSKCGRCAPCKPVHVPIQPGFSMPLEYYPEAWRCKCGDKLFMP 113
BLAST of CMJ_chr9_017590.1 vs. ExPASy TrEMBL
Match: A0A6A2ZSL0|A0A6A2ZSL0_HIBSY (Epidermal patterning factor-like protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110770pilonHSYRG00020 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.758e-31 Identity = 56/82 (68.29%), Postives = 62/82 (75.61%), Query Frame = 0 Query: 90 LDDNRKNNINSECVAGVPAPD--LRLKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
L + + SE +G D KR+SGPGSSPP+CRSKCG CSPCKPVHVPIQPG S+PLEYYPEAWRCKCGNKLFMP
Sbjct: 28 LGSGFQERVGSEKRSGSGVLDRFFAQKRLSGPGSSPPSCRSKCGSCSPCKPVHVPIQPGFSIPLEYYPEAWRCKCGNKLFMP 109
BLAST of CMJ_chr9_017590.1 vs. ExPASy TrEMBL
Match: A0A6A6K876|A0A6A6K876_HEVBR (Epidermal patterning factor-like protein OS=Hevea brasiliensis OX=3981 GN=GH714_020364 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.168e-31 Identity = 58/87 (66.67%), Postives = 65/87 (74.71%), Query Frame = 0 Query: 85 TRYVSLDDNRKNNINSECVAGVPAPD--LRLKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
T + L + E G+ A D L KR+SGPGSSPPTCRSKCG+CSPC+PVHVPIQPG S+PLEYYPEAWRCKCGNKLFMP
Sbjct: 29 TTLLLLGSGFSEREDRERGRGLRAFDRVLTQKRLSGPGSSPPTCRSKCGKCSPCEPVHVPIQPGFSIPLEYYPEAWRCKCGNKLFMP 115
BLAST of CMJ_chr9_017590.1 vs. ExPASy TrEMBL
Match: A0A2C9UDK9|A0A2C9UDK9_MANES (Epidermal patterning factor-like protein OS=Manihot esculenta OX=3983 GN=MANES_15G032700 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.230e-31 Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 0 Query: 111 LRLKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
L KR+SGPGSSPPTCRSKCG+CSPCKPVHVPIQPG S+PLEYYPEAWRCKCGNKLFMP
Sbjct: 55 LSQKRLSGPGSSPPTCRSKCGKCSPCKPVHVPIQPGFSIPLEYYPEAWRCKCGNKLFMP 113
BLAST of CMJ_chr9_017590.1 vs. ExPASy Swiss-Prot
Match: EPFL4_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 5.516e-33 Identity = 52/56 (92.86%), Postives = 53/56 (94.64%), Query Frame = 0 Query: 114 KRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
KR GPGSSPPTCRSKCG+C PCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP
Sbjct: 54 KRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109
BLAST of CMJ_chr9_017590.1 vs. ExPASy Swiss-Prot
Match: EPFL5_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.893e-30 Identity = 49/66 (74.24%), Postives = 54/66 (81.82%), Query Frame = 0 Query: 104 AGVPAPDLRLKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
+G+P + KR+ GPGS PP CR KCG+C PCK VHVPIQPGL MPLEYYPEAWRCKCGNKLFMP
Sbjct: 42 SGLPGQIVDQKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107
BLAST of CMJ_chr9_017590.1 vs. ExPASy Swiss-Prot
Match: EPFL6_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.993e-24 Identity = 44/66 (66.67%), Postives = 51/66 (77.27%), Query Frame = 0 Query: 105 GVPAPDLRLKRI-SGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
G + + L+RI G GSSPP C SKCGRC+PCKPVHVP+ PG + EYYPEAWRCKCGNKL+MP
Sbjct: 91 GDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156
BLAST of CMJ_chr9_017590.1 vs. Araport11
Match: AT4G14723.1 (| EPIDERMAL PATTERNING FACTOR-like protein | Chr4:8440167-8440693 FORWARD LENGTH=109 | 201606) HSP 1 Score: 116.316 bits (290), Expect = 5.644e-34 Identity = 52/56 (92.86%), Postives = 53/56 (94.64%), Query Frame = 0 Query: 114 KRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
KR GPGSSPPTCRSKCG+C PCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP
Sbjct: 54 KRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109
BLAST of CMJ_chr9_017590.1 vs. Araport11
Match: AT3G22820.1 (| allergen-like protein | Chr3:8073451-8074061 REVERSE LENGTH=107 | 201606) HSP 1 Score: 109.383 bits (272), Expect = 2.959e-31 Identity = 49/66 (74.24%), Postives = 54/66 (81.82%), Query Frame = 0 Query: 104 AGVPAPDLRLKRISGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
+G+P + KR+ GPGS PP CR KCG+C PCK VHVPIQPGL MPLEYYPEAWRCKCGNKLFMP
Sbjct: 42 SGLPGQIVDQKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107
BLAST of CMJ_chr9_017590.1 vs. Araport11
Match: AT2G30370.2 (| allergen-like protein | Chr2:12940577-12942167 REVERSE LENGTH=156 | 201606) HSP 1 Score: 94.7449 bits (234), Expect = 5.108e-25 Identity = 44/66 (66.67%), Postives = 51/66 (77.27%), Query Frame = 0 Query: 105 GVPAPDLRLKRI-SGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
G + + L+RI G GSSPP C SKCGRC+PCKPVHVP+ PG + EYYPEAWRCKCGNKL+MP
Sbjct: 91 GDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156
BLAST of CMJ_chr9_017590.1 vs. Araport11
Match: AT2G30370.3 (| allergen-like protein | Chr2:12940577-12942579 REVERSE LENGTH=166 | 201606) HSP 1 Score: 95.1301 bits (235), Expect = 5.153e-25 Identity = 44/66 (66.67%), Postives = 51/66 (77.27%), Query Frame = 0 Query: 105 GVPAPDLRLKRI-SGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
G + + L+RI G GSSPP C SKCGRC+PCKPVHVP+ PG + EYYPEAWRCKCGNKL+MP
Sbjct: 101 GDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 166
BLAST of CMJ_chr9_017590.1 vs. Araport11
Match: AT2G30370.1 (| allergen-like protein | Chr2:12940577-12942167 REVERSE LENGTH=230 | 201606) HSP 1 Score: 95.1301 bits (235), Expect = 2.191e-24 Identity = 44/66 (66.67%), Postives = 51/66 (77.27%), Query Frame = 0 Query: 105 GVPAPDLRLKRI-SGPGSSPPTCRSKCGRCSPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 169
G + + L+RI G GSSPP C SKCGRC+PCKPVHVP+ PG + EYYPEAWRCKCGNKL+MP
Sbjct: 165 GDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 230 The following BLAST results are available for this feature:
BLAST of CMJ_chr9_017590.1 vs. ExPASy TrEMBL
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CMJ_chr9_017590.1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs UniProt Swissprot) Total hits: 3 Position : 0 Zoom : x 1
BLAST of CMJ_chr9_017590.1 vs. Araport11
Analysis Date: 2023-05-15 (Blastp of Citrus maxima Cupi Majiayou v1.0 proteins vs Araport11) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima Cupi Majiayou v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CMJ_chr9_017590.1_cmj_v1 ID=CMJ_chr9_017590.1_cmj_v1; Name=CMJ_chr9_017590.1; organism=Citrus maxima; type=mRNA; length=510bpback to top protein sequence of CMJ_chr9_017590.1_cmj_v1 >CMJ_chr9_017590.1_cmj_v1 ID=CMJ_chr9_017590.1_cmj_v1; Name=CMJ_chr9_017590.1_cmj_v1; organism=Citrus maxima; type=polypeptide; length=170bpback to top mRNA from alignment at chr9:26709257..26710784- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1528bp; location=Sequence derived from: chr9:26709257..26710784- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr9:26709257..26710784- >CMJ_chr9_017590.1_cmj_v1 ID=CMJ_chr9_017590.1_cmj_v1; Name=CMJ_chr9_017590.1; organism=Citrus maxima; type=CDS; length=510bp; location=Sequence derived from: chr9:26709257..26710784- (Citrus maximaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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