Chh200730.2 | Citrus Genome Database

Transcript Overview


Name	Chh200730.2
Unique Name	Chh200730.2-HH_v1
Type	mRNA
Organism	Citrus hongheensis (Honghe papeda, alei)
Sequence length	1053

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Citrus hongheensis cv. HH genome v1.0	2023-12-21
InterProScan Analysis for Citrus hongheensis cv. HH v1.0 proteins	2024-02-02
Blastp of Citrus hongheensis cv. HH v1.0 proteins vs UniProt TrEMBL	2024-02-02
Blastp of Citrus hongheensis cv. HH v1.0 proteins vs UniProt Swissprot	2024-02-02
Blastp of Citrus hongheensis cv. HH v1.0 proteins vs Araport11	2024-02-02

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ccrchhL330	Citrus australasica CRC3672 genome v1	Citrus australasica
ccrchhL775	Citrus australasica CRC3672 genome v1	Citrus australasica
ccchhL207	Citrus clementina genome v1.0 (JGI)	Citrus clementina
cauchhL338	Citrus australis genome v1.0 (UQ)	Citrus australis
chhcsR449	Citrus sinensis genome v1.1 (JGI)	Citrus sinensis
chhcmR407	Citrus maxima (C. grandis) genome v1.0	Citrus maxima
chhcmjR410	Citrus maxima Cupi Majiayou v1.0 genome	Citrus maxima
chhcleR0634	Citrus limon cv. Eureka genome v1.0	Citrus limon
chhcleR0635	Citrus limon cv. Eureka genome v1.0	Citrus limon
chhdvaR273	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
chhswoR378	Citrus sinensis Di-Haploid Sweet Orange (DHSO) v3.0 (HZAU)	Citrus sinensis
chhdvbR297	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis
chhzkR428	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata
chhfhsR415	Fortunella hindsii S3y-45 genome v2.0	Fortunella hindsii

Orthologs


Gene/Transcript	Assembly	Species
gene-KPL71_018876-mRNA4	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis
gene-KPL70_018699-mRNA3	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Chh200730	Chh200730-HH_v1	Citrus hongheensis	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Chh200730.2.utr5.1	Chh200730.2.utr5.1-HH_v1	Citrus hongheensis	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Chh200730.2.exon1	Chh200730.2.exon1-HH_v1	Citrus hongheensis	exon
Chh200730.2.exon2	Chh200730.2.exon2-HH_v1	Citrus hongheensis	exon
Chh200730.2.exon3	Chh200730.2.exon3-HH_v1	Citrus hongheensis	exon
Chh200730.2.exon4	Chh200730.2.exon4-HH_v1	Citrus hongheensis	exon
Chh200730.2.exon5	Chh200730.2.exon5-HH_v1	Citrus hongheensis	exon
Chh200730.2.exon6	Chh200730.2.exon6-HH_v1	Citrus hongheensis	exon
Chh200730.2.exon7	Chh200730.2.exon7-HH_v1	Citrus hongheensis	exon
Chh200730.2.exon8	Chh200730.2.exon8-HH_v1	Citrus hongheensis	exon
Chh200730.2.exon9	Chh200730.2.exon9-HH_v1	Citrus hongheensis	exon
Chh200730.2.exon10	Chh200730.2.exon10-HH_v1	Citrus hongheensis	exon
Chh200730.2.exon11	Chh200730.2.exon11-HH_v1	Citrus hongheensis	exon
Chh200730.2.exon12	Chh200730.2.exon12-HH_v1	Citrus hongheensis	exon
Chh200730.2.exon13	Chh200730.2.exon13-HH_v1	Citrus hongheensis	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Chh200730.2.cds.1	Chh200730.2.cds.1-HH_v1	Citrus hongheensis	CDS
Chh200730.2.cds.2	Chh200730.2.cds.2-HH_v1	Citrus hongheensis	CDS
Chh200730.2.cds.3	Chh200730.2.cds.3-HH_v1	Citrus hongheensis	CDS
Chh200730.2.cds.4	Chh200730.2.cds.4-HH_v1	Citrus hongheensis	CDS
Chh200730.2.cds.5	Chh200730.2.cds.5-HH_v1	Citrus hongheensis	CDS
Chh200730.2.cds.6	Chh200730.2.cds.6-HH_v1	Citrus hongheensis	CDS
Chh200730.2.cds.7	Chh200730.2.cds.7-HH_v1	Citrus hongheensis	CDS
Chh200730.2.cds.8	Chh200730.2.cds.8-HH_v1	Citrus hongheensis	CDS
Chh200730.2.cds.9	Chh200730.2.cds.9-HH_v1	Citrus hongheensis	CDS
Chh200730.2.cds.10	Chh200730.2.cds.10-HH_v1	Citrus hongheensis	CDS
Chh200730.2.cds.11	Chh200730.2.cds.11-HH_v1	Citrus hongheensis	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Chh200730.2.utr3.1	Chh200730.2.utr3.1-HH_v1	Citrus hongheensis	three_prime_UTR
Chh200730.2.utr3.2	Chh200730.2.utr3.2-HH_v1	Citrus hongheensis	three_prime_UTR
Chh200730.2.utr3.3	Chh200730.2.utr3.3-HH_v1	Citrus hongheensis	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Chh200730.2-HH_v1	Chh200730.2-HH_v1	Citrus hongheensis	polypeptide
Chh200730.2-HH_v1	Chh200730.2-HH_v1-protein	Citrus hongheensis	polypeptide

Homology

[Close]

BLAST of Chh200730.2 vs. ExPASy TrEMBL
Match: V4SXF2|V4SXF2_CITCL (Anaphase-promoting complex subunit 4 WD40 domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10011725mg PE=4 SV=1)

HSP 1 Score: 704.901 bits (1818), Expect = 0.000e+0
Identity = 347/349 (99.43%), Postives = 348/349 (99.71%), Query Frame = 0

Query:    1 MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPDRQESEQRGREEGKGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG 349
            MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPD QESEQRGREEG+GLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG
Sbjct:    1 MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPDTQESEQRGREEGEGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG 349

[Close]

BLAST of Chh200730.2 vs. ExPASy TrEMBL
Match: V4UVJ6|V4UVJ6_CITCL (Anaphase-promoting complex subunit 4 WD40 domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10011725mg PE=4 SV=1)

HSP 1 Score: 697.967 bits (1800), Expect = 0.000e+0
Identity = 346/349 (99.14%), Postives = 347/349 (99.43%), Query Frame = 0

Query:    1 MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPDRQESEQRGREEGKGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG 349
            MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPD QESEQRGREEG+GLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDS GKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG
Sbjct:    1 MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPDTQESEQRGREEGEGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDS-GKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG 348

[Close]

BLAST of Chh200730.2 vs. ExPASy TrEMBL
Match: A0A2C9V4A1|A0A2C9V4A1_MANES (Anaphase-promoting complex subunit 4 WD40 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_10G077600 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 0.000e+0
Identity = 278/354 (78.53%), Postives = 311/354 (87.85%), Query Frame = 0

Query:    1 MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPDRQESEQRGR-----EEGKGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG 349
            MPSFP+PGSVT+CEINRDLITAD+LSDDRAKDTYGK+LGMVF+P+PFQ+D+LAS+S + +  EQ GR      E  GL          SIK + HP++V++LPEVD +G+SWHQHKHI+AFISG  QVIVRDYEDS+GKDACILT DSQRD+KVLEWRPNGG+SLSV CKGGICIWA SYPGN ASVRSG AS+LG LSRG GTRWTLVDFL+S N EQI+ALSW PDGRYLASASY+SSSFTIWDVAQGLGTPIRRG G +S+LKWSP GDYFFAAKFDGTFYLWETNTWTSE WSSTSGFVTGATWDP+GRMIL+AF+GS TLGSIHFASKPPSLDAHLLPVDLP+I+SLTG
Sbjct:    1 MPSFPQPGSVTICEINRDLITADSLSDDRAKDTYGKILGMVFSPIPFQADQLASTSAELETQEQ-GRPCGENAETNGLSKGFKSFAIDSIKRIFHPNYVNMLPEVDFKGLSWHQHKHIIAFISGRNQVIVRDYEDSDGKDACILTCDSQRDIKVLEWRPNGGKSLSVACKGGICIWAASYPGNVASVRSGTASYLGTLSRGAGTRWTLVDFLQSHNDEQISALSWSPDGRYLASASYQSSSFTIWDVAQGLGTPIRRGLGCISMLKWSPIGDYFFAAKFDGTFYLWETNTWTSETWSSTSGFVTGATWDPDGRMILIAFSGSATLGSIHFASKPPSLDAHLLPVDLPEIMSLTG 353

[Close]

BLAST of Chh200730.2 vs. ExPASy TrEMBL
Match: A0A251N7I0|A0A251N7I0_PRUPE (Anaphase-promoting complex subunit 4 WD40 domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_7G021600 PE=4 SV=1)

HSP 1 Score: 575.474 bits (1482), Expect = 0.000e+0
Identity = 274/350 (78.29%), Postives = 310/350 (88.57%), Query Frame = 0

Query:    1 MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASS-SPDRQESEQRGREEGKGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG 349
            MPSFP PGSV++CEINRDLITA++LSDD AKDTYGK+LGMVF+PVPFQSD+LA   SP++ + +       KGL  TL GI++ S+ PL HP+HV+LLPEVDLQGVSWHQHKHI+AFISG  QVIVRD+EDSEGK+ CIL ++SQR+VKVLEWRPNGGR LSV C GGICIWA S+PG+AASVRSGA+SFLG LSRG G R+TLVDFLRS NGEQI+ALSW PDGRYLAS SYESSSFTIWDVAQGLGTPIRRG GG+S+LKWSPTGDYFF+AKFDGTFYLWETNTWTSEPWSSTSGFV GA+WDP+G MILLAF+ S TLGSIHFASKPPSLDAHLLPV+LP+I+SLT 
Sbjct:    1 MPSFPHPGSVSICEINRDLITAESLSDDVAKDTYGKILGMVFSPVPFQSDQLARPPSPEQDDQQVATTAPTKGLLQTLQGILNRSLTPLFHPNHVNLLPEVDLQGVSWHQHKHIIAFISGPNQVIVRDFEDSEGKEPCILANESQREVKVLEWRPNGGRQLSVACNGGICIWAASFPGSAASVRSGASSFLGTLSRGSGVRYTLVDFLRSHNGEQISALSWSPDGRYLASGSYESSSFTIWDVAQGLGTPIRRGLGGISMLKWSPTGDYFFSAKFDGTFYLWETNTWTSEPWSSTSGFVKGASWDPDGHMILLAFSKSSTLGSIHFASKPPSLDAHLLPVELPEIMSLTN 350

[Close]

BLAST of Chh200730.2 vs. ExPASy TrEMBL
Match: A0A251N5A9|A0A251N5A9_PRUPE (Anaphase-promoting complex subunit 4 WD40 domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_7G021600 PE=4 SV=1)

HSP 1 Score: 573.933 bits (1478), Expect = 0.000e+0
Identity = 274/349 (78.51%), Postives = 310/349 (88.83%), Query Frame = 0

Query:    1 MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASS-SPDRQESEQRGREEGKGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLT 348
            MPSFP PGSV++CEINRDLITA++LSDD AKDTYGK+LGMVF+PVPFQSD+LA   SP++ + +       KGL  TL GI++ S+ PL HP+HV+LLPEVDLQGVSWHQHKHI+AFISG  QVIVRD+EDSEGK+ CIL ++SQR+VKVLEWRPNGGR LSV C GGICIWA S+PG+AASVRSGA+SFLG LSRG G R+TLVDFLRS NGEQI+ALSW PDGRYLAS SYESSSFTIWDVAQGLGTPIRRG GG+S+LKWSPTGDYFF+AKFDGTFYLWETNTWTSEPWSSTSGFV GA+WDP+G MILLAF+ S TLGSIHFASKPPSLDAHLLPV+LP+I+SLT
Sbjct:    1 MPSFPHPGSVSICEINRDLITAESLSDDVAKDTYGKILGMVFSPVPFQSDQLARPPSPEQDDQQVATTAPTKGLLQTLQGILNRSLTPLFHPNHVNLLPEVDLQGVSWHQHKHIIAFISGPNQVIVRDFEDSEGKEPCILANESQREVKVLEWRPNGGRQLSVACNGGICIWAASFPGSAASVRSGASSFLGTLSRGSGVRYTLVDFLRSHNGEQISALSWSPDGRYLASGSYESSSFTIWDVAQGLGTPIRRGLGGISMLKWSPTGDYFFSAKFDGTFYLWETNTWTSEPWSSTSGFVKGASWDPDGHMILLAFSKSSTLGSIHFASKPPSLDAHLLPVELPEIMSLT 349

[Close]

BLAST of Chh200730.2 vs. ExPASy TrEMBL
Match: A0A251N5E1|A0A251N5E1_PRUPE (Anaphase-promoting complex subunit 4 WD40 domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_7G021600 PE=4 SV=1)

HSP 1 Score: 572.778 bits (1475), Expect = 0.000e+0
Identity = 274/349 (78.51%), Postives = 310/349 (88.83%), Query Frame = 0

Query:    1 MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASS-SPDRQESEQRGREEGKGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLT 348
            MPSFP PGSV++CEINRDLITA++LSDD AKDTYGK+LGMVF+PVPFQSD+LA   SP++ + +       KGL  TL GI++ S+ PL HP+HV+LLPEVDLQGVSWHQHKHI+AFISG  QVIVRD+EDSEGK+ CIL ++SQR+VKVLEWRPNGGR LSV C GGICIWA S+PG+AASVRSGA+SFLG LSRG G R+TLVDFLRS NGEQI+ALSW PDGRYLAS SYESSSFTIWDVAQGLGTPIRRG GG+S+LKWSPTGDYFF+AKFDGTFYLWETNTWTSEPWSSTSGFV GA+WDP+G MILLAF+ S TLGSIHFASKPPSLDAHLLPV+LP+I+SLT
Sbjct:    1 MPSFPHPGSVSICEINRDLITAESLSDDVAKDTYGKILGMVFSPVPFQSDQLARPPSPEQDDQQVATTAPTKGLLQTLQGILNRSLTPLFHPNHVNLLPEVDLQGVSWHQHKHIIAFISGPNQVIVRDFEDSEGKEPCILANESQREVKVLEWRPNGGRQLSVACNGGICIWAASFPGSAASVRSGASSFLGTLSRGSGVRYTLVDFLRSHNGEQISALSWSPDGRYLASGSYESSSFTIWDVAQGLGTPIRRGLGGISMLKWSPTGDYFFSAKFDGTFYLWETNTWTSEPWSSTSGFVKGASWDPDGHMILLAFSKSSTLGSIHFASKPPSLDAHLLPVELPEIMSLT 349

[Close]

BLAST of Chh200730.2 vs. ExPASy TrEMBL
Match: A0A6P5TWE0|A0A6P5TWE0_PRUAV (Aladin isoform X1 OS=Prunus avium OX=42229 GN=LOC110771370 PE=4 SV=1)

HSP 1 Score: 570.852 bits (1470), Expect = 0.000e+0
Identity = 273/349 (78.22%), Postives = 308/349 (88.25%), Query Frame = 0

Query:    1 MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASS-SPDRQESEQRGREEGKGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLT 348
            MPSFP PGSV++CEINRDLITA++LSDD AKDTYGK+LGMVF+PVPFQ D+LA   SPD+ + +       KGL   L GI++ S+ PL HP+HV+LLPEVDLQGVSWHQHKHI+AFISG  QVIVRD+EDSEGK+ CIL ++SQR+VKVLEWRPNGGR LSV C GGICIWA S+PG+AASVRSGA+SFLG LSRG G R+TLVDFLRS NGEQI+ALSW PDGRYLAS SYESSSFTIWDVAQGLGTPIRRG GG+S+LKWSPTGDYFF+AKFDGTFYLWETNTWTSEPWSSTSGFV GA+WDP+G MILLAF+ S TLGSIHFASKPPSLDAHLLPV+LP+I+SLT
Sbjct:    1 MPSFPHPGSVSICEINRDLITAESLSDDVAKDTYGKILGMVFSPVPFQPDQLARPPSPDQDDQQVATTASTKGLLQNLQGILNRSLTPLFHPNHVNLLPEVDLQGVSWHQHKHIIAFISGPNQVIVRDFEDSEGKEPCILANESQREVKVLEWRPNGGRQLSVACNGGICIWAASFPGSAASVRSGASSFLGTLSRGSGVRYTLVDFLRSHNGEQISALSWSPDGRYLASGSYESSSFTIWDVAQGLGTPIRRGLGGISMLKWSPTGDYFFSAKFDGTFYLWETNTWTSEPWSSTSGFVKGASWDPDGHMILLAFSKSSTLGSIHFASKPPSLDAHLLPVELPEIMSLT 349

[Close]

BLAST of Chh200730.2 vs. ExPASy TrEMBL
Match: A0A6P5TWF1|A0A6P5TWF1_PRUAV (Aladin isoform X2 OS=Prunus avium OX=42229 GN=LOC110771370 PE=4 SV=1)

HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0
Identity = 272/349 (77.94%), Postives = 307/349 (87.97%), Query Frame = 0

Query:    1 MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASS-SPDRQESEQRGREEGKGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLT 348
            MPSFP PGSV++CEINRDLITA++LSDD AKDTYGK+LGMVF+PVPFQ D+LA   SPD+ + +       KGL   L GI++ S+ PL HP+HV+LLPEVDLQGVSWHQHKHI+AFISG  QVIVRD+EDS GK+ CIL ++SQR+VKVLEWRPNGGR LSV C GGICIWA S+PG+AASVRSGA+SFLG LSRG G R+TLVDFLRS NGEQI+ALSW PDGRYLAS SYESSSFTIWDVAQGLGTPIRRG GG+S+LKWSPTGDYFF+AKFDGTFYLWETNTWTSEPWSSTSGFV GA+WDP+G MILLAF+ S TLGSIHFASKPPSLDAHLLPV+LP+I+SLT
Sbjct:    1 MPSFPHPGSVSICEINRDLITAESLSDDVAKDTYGKILGMVFSPVPFQPDQLARPPSPDQDDQQVATTASTKGLLQNLQGILNRSLTPLFHPNHVNLLPEVDLQGVSWHQHKHIIAFISGPNQVIVRDFEDS-GKEPCILANESQREVKVLEWRPNGGRQLSVACNGGICIWAASFPGSAASVRSGASSFLGTLSRGSGVRYTLVDFLRSHNGEQISALSWSPDGRYLASGSYESSSFTIWDVAQGLGTPIRRGLGGISMLKWSPTGDYFFSAKFDGTFYLWETNTWTSEPWSSTSGFVKGASWDPDGHMILLAFSKSSTLGSIHFASKPPSLDAHLLPVELPEIMSLT 348

[Close]

BLAST of Chh200730.2 vs. ExPASy TrEMBL
Match: A0A5N6RRP1|A0A5N6RRP1_9ROSI (Anaphase-promoting complex subunit 4 WD40 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_019941 PE=4 SV=1)

HSP 1 Score: 561.607 bits (1446), Expect = 0.000e+0
Identity = 270/354 (76.27%), Postives = 309/354 (87.29%), Query Frame = 0

Query:    1 MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPDRQESEQRGR-----EEGKGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG 349
            MPSFP+PGSVT+CEINRDLITA+NLSDD AKDTYGK+LGMVF+PVPFQS + A  S ++   +Q GR      + KG+  TL GI + SIK L HP+ V+LLPEVDL GVSWHQHKH++AF+SG  QVIVRDYEDSEGKD CILT++ QRDVKVLEWRPNGG+ L+V CKGG+CIWA SYPGNAASVRSGAASFLG +SRG G ++ LVDFLR+ + EQI+A+SW PDGRYLASASYESS+FTIWDVAQG+GTPIRRG GG+S++KWSPTGDYFFAAKFDGTF LWETNTWTSE WSSTSGFVTGATWDP+GRMIL+AF+ S TLGSIHFASKPPSLDAHLLPVDLP+I+SLTG
Sbjct:    1 MPSFPQPGSVTICEINRDLITAENLSDDGAKDTYGKLLGMVFSPVPFQSGQTAPVSFEQDTEQQEGRMTSDRAQRKGVVETLQGIFNRSIKRLFHPNDVNLLPEVDLHGVSWHQHKHVIAFVSGPNQVIVRDYEDSEGKDPCILTNELQRDVKVLEWRPNGGKMLAVACKGGVCIWAASYPGNAASVRSGAASFLGTISRGSGGQYILVDFLRNPSDEQISAVSWSPDGRYLASASYESSAFTIWDVAQGVGTPIRRGLGGISMMKWSPTGDYFFAAKFDGTFCLWETNTWTSETWSSTSGFVTGATWDPDGRMILIAFSESSTLGSIHFASKPPSLDAHLLPVDLPEIMSLTG 354

[Close]

BLAST of Chh200730.2 vs. ExPASy TrEMBL
Match: A0A2P2MB56|A0A2P2MB56_RHIMU (Uncharacterized protein MANES_10G077600 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 558.91 bits (1439), Expect = 0.000e+0
Identity = 272/354 (76.84%), Postives = 307/354 (86.72%), Query Frame = 0

Query:    1 MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPDRQESEQRGREEG-----KGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG 349
            MPSFP+PG VT+CEINRDLITA+ LSDDRA  TYGK+LGMVF+PVPFQ ++L ++S + QE EQ+GR +G     KGL   L GI++ SIK  L+P++V+LLPEVDLQ VSWHQHKHIVAFISG  QVIVRD+EDSEGKD C LTS+ QRD+KVLEWRPNGG+SLSV CK GICIWA SYP NAASVRSGAASFLG LSRG  TRWTLVDFL S + EQ+TALSW P+GRYLASASYESSSFTIWDVAQG+GTPIRRG GG+S+LKWSPTGDYFF+AKFDGTFYLWETN WTSE WSSTSGFV GATWDP+G +IL+AF+GS TL SIHFASKPPSLDAHLLPVDLP+I+SLT 
Sbjct:    1 MPSFPQPGWVTICEINRDLITAERLSDDRADITYGKILGMVFSPVPFQPEQLVATSAE-QEMEQQGRIDGESVQRKGLAKALQGIVNSSIKRFLNPNYVNLLPEVDLQAVSWHQHKHIVAFISGPNQVIVRDFEDSEGKDPCFLTSECQRDIKVLEWRPNGGKSLSVACKDGICIWAASYPENAASVRSGAASFLGTLSRGSATRWTLVDFLHSCDDEQVTALSWSPNGRYLASASYESSSFTIWDVAQGVGTPIRRGLGGISMLKWSPTGDYFFSAKFDGTFYLWETNMWTSERWSSTSGFVMGATWDPDGHIILIAFSGSSTLASIHFASKPPSLDAHLLPVDLPEIISLTN 353

[Close]

BLAST of Chh200730.2 vs. ExPASy Swiss-Prot
Match: AAAS_ARATH (Aladin OS=Arabidopsis thaliana OX=3702 GN=AAAS PE=1 SV=1)

HSP 1 Score: 516.538 bits (1329), Expect = 0.000e+0
Identity = 250/351 (71.23%), Postives = 289/351 (82.34%), Query Frame = 0

Query:    1 MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPDRQESEQRGREEGKGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPW--SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG 349
            M SFP PGSVTVCEINRDLITA NLSD+RA++TYGKVLGMVF+PV F S   +    + QE+  +   E KGL +TL   ++ S+K +L P  V LL E+DLQGVSWHQ KHI+AFISG+ QV +RDYED + K+ CILTSDSQR+VK LEWRPNGG+SLS+ C+GGICIWA SYPGN A VRSG ++  G+LSRG GTRW LVDFLR QN EQI+ALSW P GRYLASASY+SSSFTIWDV+QG GTPIRRG GG+S+LKWSPTGDYFFAA+FDGTF LWETNTWTSEPW  SS SG VTGA WDPEGR IL++F+ S TLGS+HF+SKPPSLDAHLLPV+LP+I SLTG
Sbjct:    1 MASFPHPGSVTVCEINRDLITAQNLSDERAQETYGKVLGMVFSPVSFDSTPSSLQENEGQENGDKASGESKGLVATLQMKVADSLKQILQPTDVTLLSEIDLQGVSWHQGKHIIAFISGANQVTIRDYEDKDEKEPCILTSDSQRNVKALEWRPNGGKSLSIACRGGICIWAASYPGNMALVRSGGSALRGSLSRGSGTRWILVDFLRCQNDEQISALSWSPCGRYLASASYDSSSFTIWDVSQGAGTPIRRGLGGISMLKWSPTGDYFFAARFDGTFCLWETNTWTSEPWSLSSGSGSVTGAIWDPEGRFILISFSKSSTLGSVHFSSKPPSLDAHLLPVELPEIASLTG 351

[Close]

BLAST of Chh200730.2 vs. ExPASy Swiss-Prot
Match: AAAS_DROME (Aladin OS=Drosophila melanogaster OX=7227 GN=Aladin PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.044e-25
Identity = 67/230 (29.13%), Postives = 104/230 (45.22%), Query Frame = 0

Query:  101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETN-TWTSEPW-SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 328
            D++ ++W+QH   +A ++G   V+    + S    A +L S SQ  +  + WRP     + +GC+ G+C W      +    R+ A S                +  +  N   IT++ W  DG  LA+AS    S  IW    G+  P++R     S+LKWSP  D+ FAA  D  F +W  +  WT+E W     G+V  A W P GR +L   +    L  + F  +
Sbjct:  139 DVRYLAWNQHFFCLA-VAGVDDVVRIYTKSSSATTATVLKSPSQTQITCMAWRPLCASEIVIGCRQGLCFWEVDSTLHLG--RTNAPS----------------EIFKYPNNLPITSMQWNKDGTQLATASIGDRSIIIWQPDTGMMQPLKRLGPPGSLLKWSPDNDWLFAATVDRVFRVWNCHQQWTTERWVCGPGGYVQTACWSPCGRFLLFVSSAEPILYRLQFVQQ 349

[Close]

BLAST of Chh200730.2 vs. ExPASy Swiss-Prot
Match: AAAS_MOUSE (Aladin OS=Mus musculus OX=10090 GN=Aaas PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.071e-20
Identity = 66/231 (28.57%), Postives = 95/231 (41.13%), Query Frame = 0

Query:  102 LQGVSWHQH--KHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR--RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 328
            L+  +WH H  K  VA +  S +V      ++       L    QR+V  L W+P     L+V C+  I IW       +    SG A  L      P                 +T+L+W P+G +L SAS   +   +WDV+     P+   RG GG++ L WSP G    A      F +WE   WT E W + SG      W P+G  +L    G   + S+ F  +
Sbjct:  154 LRVFAWHPHTNKFAVALLDDSIRVY-----NANSTIVPSLKHRLQRNVAALAWKPLSASVLAVACQSCILIWTLDPTSLSTRPSSGCAQVLSHPGHTP-----------------VTSLAWAPNGGWLLSASPVDAVILVWDVSTETCVPLPWFRG-GGVTNLLWSPDGSKVLATTPSAVFRVWEAQMWTCEAWPTLSGRCQTGCWSPDGNRLLFTVLGEALIYSLSFPER 361

[Close]

BLAST of Chh200730.2 vs. ExPASy Swiss-Prot
Match: AAAS_HUMAN (Aladin OS=Homo sapiens OX=9606 GN=AAAS PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.018e-18
Identity = 66/231 (28.57%), Postives = 94/231 (40.69%), Query Frame = 0

Query:  102 LQGVSWHQH--KHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIR--RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 328
            L+  +WH H  K  VA +  S +V      ++       L    QR+V  L W+P     L+V C+  I IW       +    SG A  L      P                 +T+L+W P G  L SAS   ++  +WDV+     P+   RG GG++ L WSP G    A      F +WE   WT E W + SG      W P+G  +L    G   + S+ F  +
Sbjct:  154 LRVFAWHPHTNKFAVALLDDSVRVY-----NASSTIVPSLKHRLQRNVASLAWKPLSASVLAVACQSCILIWTLDPTSLSTRPSSGCAQVLSHPGHTP-----------------VTSLAWAPSGGRLLSASPVDAAIRVWDVSTETCVPLPWFRG-GGVTNLLWSPDGSKILATTPSAVFRVWEAQMWTCERWPTLSGRCQTGCWSPDGSRLLFTVLGEPLIYSLSFPER 361

[Close]

BLAST of Chh200730.2 vs. ExPASy Swiss-Prot
Match: HIRA_ORYSJ (Protein HIRA OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0567700 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 8.641e-7
Identity = 37/118 (31.36%), Postives = 53/118 (44.92%), Query Frame = 0

Query:  201 WTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSI-LKWSPTGDYFFAAKFDGTFYLWETNTW-----TSEPWSSTSG--FVTGATWDPEGRMI 310
            W +V  LR    + +  L+W PD   LAS S +++   IW +A G+ T + RG   L   + W P G +  +   D T  +W T+ W     T   WS + G  F     W P G  I
Sbjct:  115 WKVVMTLRGHTAD-VVDLNWSPDDSTLASGSLDNT-VHIWSMANGICTAVLRGHSSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTEGHWSKSLGSTFFRRLAWSPCGHFI 230

[Close]

BLAST of Chh200730.2 vs. Araport11
Match: | (Symbols: ALADIN | | chr3:21066330-21069343 FORWARD LENGTH=447)

HSP 1 Score: 516.538 bits (1329), Expect = 0.000e+0
Identity = 250/351 (71.23%), Postives = 289/351 (82.34%), Query Frame = 0

Query:    1 MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPDRQESEQRGREEGKGLFSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPW--SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG 349
            M SFP PGSVTVCEINRDLITA NLSD+RA++TYGKVLGMVF+PV F S   +    + QE+  +   E KGL +TL   ++ S+K +L P  V LL E+DLQGVSWHQ KHI+AFISG+ QV +RDYED + K+ CILTSDSQR+VK LEWRPNGG+SLS+ C+GGICIWA SYPGN A VRSG ++  G+LSRG GTRW LVDFLR QN EQI+ALSW P GRYLASASY+SSSFTIWDV+QG GTPIRRG GG+S+LKWSPTGDYFFAA+FDGTF LWETNTWTSEPW  SS SG VTGA WDPEGR IL++F+ S TLGS+HF+SKPPSLDAHLLPV+LP+I SLTG
Sbjct:    1 MASFPHPGSVTVCEINRDLITAQNLSDERAQETYGKVLGMVFSPVSFDSTPSSLQENEGQENGDKASGESKGLVATLQMKVADSLKQILQPTDVTLLSEIDLQGVSWHQGKHIIAFISGANQVTIRDYEDKDEKEPCILTSDSQRNVKALEWRPNGGKSLSIACRGGICIWAASYPGNMALVRSGGSALRGSLSRGSGTRWILVDFLRCQNDEQISALSWSPCGRYLASASYDSSSFTIWDVSQGAGTPIRRGLGGISMLKWSPTGDYFFAARFDGTFCLWETNTWTSEPWSLSSGSGSVTGAIWDPEGRFILISFSKSSTLGSVHFSSKPPSLDAHLLPVELPEIASLTG 351

The following BLAST results are available for this feature:

BLAST of Chh200730.2 vs. ExPASy TrEMBL
BLAST of Chh200730.2 vs. ExPASy Swiss-Prot
BLAST of Chh200730.2 vs. Araport11

BLAST of Chh200730.2 vs. ExPASy TrEMBL
Analysis Date: 2024-02-02 (Blastp of Citrus hongheensis cv. HH v1.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
V4SXF2\|V4SXF2_CITCL	0.000e+0	99.43	Anaphase-promoting complex subunit 4 WD40 domain-c...	[more]
V4UVJ6\|V4UVJ6_CITCL	0.000e+0	99.14	Anaphase-promoting complex subunit 4 WD40 domain-c...	[more]
A0A2C9V4A1\|A0A2C9V4A1_MANES	0.000e+0	78.53	Anaphase-promoting complex subunit 4 WD40 domain-c...	[more]
A0A251N7I0\|A0A251N7I0_PRUPE	0.000e+0	78.29	Anaphase-promoting complex subunit 4 WD40 domain-c...	[more]
A0A251N5A9\|A0A251N5A9_PRUPE	0.000e+0	78.51	Anaphase-promoting complex subunit 4 WD40 domain-c...	[more]
A0A251N5E1\|A0A251N5E1_PRUPE	0.000e+0	78.51	Anaphase-promoting complex subunit 4 WD40 domain-c...	[more]
A0A6P5TWE0\|A0A6P5TWE0_PRUAV	0.000e+0	78.22	Aladin isoform X1 OS=Prunus avium OX=42229 GN=LOC1...	[more]
A0A6P5TWF1\|A0A6P5TWF1_PRUAV	0.000e+0	77.94	Aladin isoform X2 OS=Prunus avium OX=42229 GN=LOC1...	[more]
A0A5N6RRP1\|A0A5N6RRP1_9ROSI	0.000e+0	76.27	Anaphase-promoting complex subunit 4 WD40 domain-c...	[more]
A0A2P2MB56\|A0A2P2MB56_RHIMU	0.000e+0	76.84	Uncharacterized protein MANES_10G077600 OS=Rhizoph...	[more]

BLAST of Chh200730.2 vs. ExPASy Swiss-Prot
Analysis Date: 2024-02-02 (Blastp of Citrus hongheensis cv. HH v1.0 proteins vs UniProt Swissprot)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AAAS_ARATH	0.000e+0	71.23	Aladin OS=Arabidopsis thaliana OX=3702 GN=AAAS PE=...	[more]
AAAS_DROME	6.044e-25	29.13	Aladin OS=Drosophila melanogaster OX=7227 GN=Aladi...	[more]
AAAS_MOUSE	9.071e-20	28.57	Aladin OS=Mus musculus OX=10090 GN=Aaas PE=1 SV=1	[more]
AAAS_HUMAN	1.018e-18	28.57	Aladin OS=Homo sapiens OX=9606 GN=AAAS PE=1 SV=1	[more]
HIRA_ORYSJ	8.641e-7	31.36	Protein HIRA OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Chh200730.2 vs. Araport11
Analysis Date: 2024-02-02 (Blastp of Citrus hongheensis cv. HH v1.0 proteins vs Araport11)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
\|	0.000e+0	71.23	Symbols: ALADIN \| \| chr3:21066330-21069343 FORWAR...	[more]

InterPro

Analysis Name: InterProScan Analysis for Citrus hongheensis cv. HH v1.0 proteins
Date Performed: 2024-02-02

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 210..241 e-value: 7.2 score: 18.6 coord: 260..281 e-value: 290.0 score: 13.5
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 30..327 e-value: 8.0E-22 score: 79.8
IPR045139	Aladin	PANTHER	PTHR14494	ALADIN/ADRACALIN/AAAS	coord: 73..345
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 101..312

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at contig55:1241568..1247291+
coding sequence from alignment at contig55:1241568..1247291+

mRNA sequence

>Chh200730.2-HH_v1 ID=Chh200730.2-HH_v1; Name=Chh200730.2; organism=Citrus hongheensis; type=mRNA; length=1053bp
ATGCCTTCGTTTCCTCGTCCCGGCTCTGTAACAGTCTGCGAAATCAACCG
AGACTTGATTACCGCAGACAATCTATCGGATGATCGAGCTAAAGATACCT
ATGGAAAAGTTCTGGGAATGGTGTTCGCTCCAGTGCCGTTTCAGTCGGAT
GAACTGGCATCGTCATCTCCGGATAGGCAGGAGTCTGAACAGCGAGGCAG
AGAAGAGGGAAAGGGTTTGTTTTCAACATTGCATGGGATTATCAGTCACT
CCATTAAACCCCTTCTTCATCCTGATCATGTACACTTGTTACCAGAGGTT
GATCTTCAGGGAGTAAGCTGGCACCAACATAAGCACATTGTTGCATTCAT
CTCTGGTTCAACTCAGGTCATAGTTCGTGACTATGAGGATTCAGAAGGGA
AGGATGCTTGCATTTTGACTAGCGACTCTCAAAGAGATGTTAAAGTTCTT
GAGTGGAGGCCAAATGGAGGGAGATCACTTTCTGTGGGATGCAAGGGTGG
AATTTGCATTTGGGCACCCTCTTATCCAGGCAACGCCGCATCTGTTAGAT
CTGGTGCTGCCTCATTCTTGGGGGCACTCTCTAGAGGCCCTGGAACTCGA
TGGACTCTAGTCGACTTTCTCCGAAGTCAGAATGGGGAACAAATAACTGC
CCTTTCATGGGGTCCGGACGGAAGATATTTGGCATCTGCCTCGTATGAAA
GCTCATCATTTACTATATGGGACGTCGCTCAAGGGCTGGGGACACCCATT
CGACGAGGATTTGGTGGCTTATCAATTCTTAAATGGTCACCGACTGGAGA
TTACTTTTTTGCTGCAAAATTTGATGGGACATTTTATCTTTGGGAGACAA
ACACATGGACATCTGAACCATGGTCTTCAACTAGTGGCTTTGTCACGGGA
GCAACATGGGATCCTGAAGGGCGCATGATACTACTGGCTTTTGCTGGATC
TTTAACATTGGGTTCTATTCACTTCGCATCAAAGCCTCCATCATTGGATG
CACACTTATTACCTGTTGATTTGCCAGATATAGTTTCCTTAACAGGCAGG
TAG

protein sequence of Chh200730.2-HH_v1

>Chh200730.2-HH_v1 ID=Chh200730.2-HH_v1; Name=Chh200730.2-HH_v1; organism=Citrus hongheensis; type=polypeptide; length=351bp
MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSD
ELASSSPDRQESEQRGREEGKGLFSTLHGIISHSIKPLLHPDHVHLLPEV
DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVL
EWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTR
WTLVDFLRSQNGEQITALSWGPDGRYLASASYESSSFTIWDVAQGLGTPI
RRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTG
ATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGR
*

mRNA from alignment at contig55:1241568..1247291+

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

> ID=; Name=; organism= ; type=; length=5724bp; location=Sequence derived from: contig55:1241568..1247291+ (Citrus hongheensis
AATTATTTCGGGTCGGGTTTCCATCAGTAGCTGTAAAACCCTATTTCAGC
TGCCATACAAAACCTCACGGAGCTATAATTCTGGAAATTTGGAAAAAAAA
AAAAACTGTCTTAATTCTCAAAATCATTTGCATTTAGAAATCAACAATGC
CTTCGTTTCCTCGTCCCGGCTCTGTAACAGTCTGCGAAATCAACCGAGAC
TTGAGTACGTTTCAACTTCAGTCGCTATCTCATTTCACATACACATTAAA
TAAAAGAATTTTTGTATATATAAATTAAATGTTTCTGCAGTTACCGCAGA
CAATCTATCGGATGATCGAGCTAAAGATACCTATGGAAAAGTTCTGGTAT
GATTTTTTATTTAACAAAATATTATTCAAAAAATTGATGTATGTATGTAA
TGTACTGGACAGTGATTTAATTTCTTGATTAATGTGTTAATTATATAGGG
AATGGTGTTCGCTCCAGTGCCGTTTCAGTCGGATGAACTGGCATCGTCAT
CTCCGGATAGGCAGGAGTCTGAACAGCGAGGCAGAGAAGAGGGAAAGGGT
TTGTTTTCAACATTGCATGGGATTATCAGTCACTCCATTAAACCCCTTCT
TCATCCTGATCATGTATCTTCTTCTCCCTTTTAAATTTCGTAGCAGTATT
TTTATTGGCATAATGAATGGTAATTGTGTTTTTTGAGACTCCTTTATCGA
ATCGTCGAGTGCATTGATGTATTGTGGATGGATTCTAATTGAAGGCATTA
TAGGACTTGTAATCGTACTTGGGGTTTTCATATGTGTGTTTTACTCTTTT
AATTCATCAACGAAAAAACTGAAGTTTTGAATTAGTGAACTCTATGTCAG
TGGCTTAGAATTTAACCCACCCAGTTGAAAAATGACAAACTTGCTAATGA
GGTTTATCTGTTGTAGTCCACTTTGCCATTGGCAGGTATTGGATTCTTTT
AAATAATTGCAATATGGGTTTATGGTGAACATTTTAACATTTTTAATTTT
TTAAGTTACAAGTACAACTGTGTCAAAAAGTTGATTGTCCTGCTATCTGT
TGATCCCAAATTTTGTTTTCTTGCCCTTATTCCCACATTTTGTGTCATGT
AATGCATTTCAATTAAATGATCTATTTTTTGTTTCTCAATAGTTTCTTAT
TGGCTTATAACTGTGATCGAGATAATTATTACTTCTGATACTATTGGAGC
ATTATTCAAAGTCATCCTTCATGTGGACATGGTGTTTGCTCAAATAAGAG
AGCTGAGTCGTTTTTTTGGTTGTTTTCTCACACCATAAGGTCCTATAGGT
ACACTTGTTACCAGAGGTTGATCTTCAGGGAGTAAGCTGGCACCAACATA
AGCACATTGTTGCATTCATCTCTGGTTCAACTCAGGTCATAGTTCGTGAC
TATGAGGATTCAGGTTAGTAATTTATCTTAATTTTCTCCTTTGAGATATC
AGTAGTGTGATATTATTCAGGGTTCTAGTTAGTTACTTGCTAGTTTTGTT
GGAATATGTTTGTTAAAGAAATTGCTTGTCCTCTCTAGTAAGGAGTTGCT
TATACAACTTTGATTTCAAATAGAAGGGAAGGATGCTTGCATTTTGACTA
GCGACTCTCAAAGAGATGTTAAAGTTCTTGAGTGGAGGCCAAATGGAGGG
AGATCACTTTCTGTGGGATGCAAGCAAGTATCGCAATTGTTACATTTTTT
ACTGTTATATACATATATATAACTTTTAGAGCTATTAGACTTCTTATCTC
TTGTACTAAATTTCAGGGGTGGAATTTGCATTTGGGCACCCTCTTATCCA
GGCAACGCCGCATCTGTTAGATCTGGTGCTGCCTCATTCTTGGGGGCACT
CTCTAGAGGCCCTGGAACTCGATGGACTCTAGTCGACTTTCTCCGAAGTC
AGAATGGGGAACAAATAACTGCCCTTTCATGGGGTCCGGACGGAAGATAT
CCAAATTGATTGTCTTATGCACTTATTTTTTTTATCATGTTATTTTGACT
TCATTGGTTACATTAGTCACACCATCCAAGCATTTTACATGCCATTGACA
CATTATTTTAACAGTCTTCTCGCATATGCCTAATAAAAATTGCCTTGTAC
TGGCTTTATTGTATTAGTTCCTCCTTCAGAAATTTCTACTTTTACTTGTG
TAGGGTGTCTATTTAAAAGTAATTTATGAATTTCCTTGACCTACCTTTAC
ATATTTGGCATCTGCCTCGTATGAAAGCTCATCATTTACTATATGGGACG
TCGCTCAAGGTGTGGTAACGCCTTAATTTAACTTGTTTTTCCTTGAATAA
TATCTGTTTGCACTCTAGAATAATTGACGAGCTAGCAAGATGAATTTAGA
CATTATTATATGACATTACTTTTGCCATTTCTTTTTGATGCTCTCATCTC
CCTTGTTGCTCCAAGAATAATCTAACCAATGTAGATGCATGTGAAGTGTA
GAAAACCACACTTTTGGCTGCTTAATCAATTTTAAAGGCTTGACTTTAAG
GTGAAATGACTCATCCATACATACATCATACCTTGAAGTTCGACCTCAGT
TACATGTAAATGGGTTTGATGGTATAACATGACTGGAATTTAACGGTTCG
ATATTTGCTTCACTACATGTGTTGAAGCTCTGAAATAATGTTTCTTAAGT
TTATCCACAGGGACAATCTTAATATCTTATCCTCATAAGGTGAATGCTCT
GGATGTAACTAACTTAAGGGATCAAATCCCACCTTAAGCAATAGAGGAAC
TTGGTCATTAATATGTGAAAAGTTTTGAGGGGATCAGTGAGGTGAAATCA
TGTTAAGACCAATTTAGTTTGGGACTTCTTTGGCCATTGTTGGCCGCGCA
GTTTTGTCAACATCGAAATGATTGAATTAGAACTTTGTGGTCATCTATCT
CCTTTTGTGAATGAATTTATACTTTTTATTTAATGCCATGTGGTTAACTT
TTTATCCACAAATCTCATCTGTATCTGAGTTGATAGTCTTTTACTAATTT
AACATTTCCAGGGCTGGGGACACCCATTCGACGAGGATTTGGTGGCTTAT
CAATTCTTAAATGGTCACCGACTGGAGATTACTTTTTTGCTGCAAAATTG
TATGTCATGACAGAACTTTTGTATTTATTCATATGCTCTGATTTTGATTA
AATGTATATCAGTTTGAGAGATGTGGGCTATTCTCTTTGTTCACAGTGAT
GGGACATTTTATCTTTGGGAGACAAACACATGGACATCTGAACCATGGTC
TTCAACTAGTGGCTTTGTCACGGTAATAAAATAATTTGGATGTCAATTTT
GATAGAATATAATATTCATGGTATCAACACACATCTTATTAAGATTATCC
AGACATAATTTTGATTATTATTATTATTATTATTATTATTATTATTATTA
TTATTATTACTGTATTGCGAATACTAAATTATGCCTGGTTTAATCATCTT
GGAGCTTTACAGGGACTTGCTCAAATTTTTTGAATCTTTATAATTCAAAT
ATTAGTGCATGCAGCCTAATAAAATTTGGCCAATGTTGGTATGTAATGAC
CAATTTCAAACAAGAAATACCAATAAGGAGATAATCAATGTTAATTGGTA
TTTCTTATTTTCAGTTTAATGTCATCCTCTTGGATGCCCTATCTAATAGT
GGGGAAAATTTGTAATCTCTAGCTTTTGATAATTTTTTTTTAATTTATTT
ACCAGGGAGCAACATGGGATCCTGAAGGGCGCATGATACTACTGGCTTTT
GCTGGATCTTTAACATTGGGTTCTATTCACTTCGCATCAAAGCCTCCATC
ATTGGGTATGCTTGTTCTACCTTAGGTTTAAAAATCTGTTTGTCTTTGGC
CAGTTTTTAAGATGTAAAGACTCAAGATCAGGGCACAAAGACAGTGCACT
GGTGTGCCTCAGGGTTATTTTGTCTTCTTTTTGTAGAAATAGATACGTCC
CCACCCTCCAAAAAAAAATACCCGGAAAGGTGGAAATTAATTCATTAATT
GCGTTTTTATAGATTGTTAGTAGGAATTCTGAAGGATAAATGTAACACTT
TGAACTGATATTAAGAATATTTGAGAAATTGAAAAAATAAAAGTTCAGGC
TTATGCAATATACCATGCTCAATGTCCTTCGAGTAGGTTAATGTACACTA
AGGCTCTATTTGATATAGCTTTTCAAATAGAGCTATTTAAGTAGAGCTTT
TATGAGTAGAGTTTTTACTCAAAAATTTTAGTTGTTTGGTTGTCAATGAG
AGCTTTTATTAACCATTAGATAAGCCATACCAAACAGGCGCTAATACTGA
TTAAGATGTGAGAAACAAATATCAAAGGAAAAGAAAACAGAACAAAATGT
TGGTATAATTGTTTTTTCTGATAGATACTTCCCTGCTGTTACAGAATCCT
GGTTTTTATACATTTTCCCCAGAAATATGTGTAGTTGTTTCTTTAAAAGT
TGATTAATTTAACAGATTAATATGTTAAATGTCAATAAGCATGATCCTAA
TTTCTTGTGTTTGATGATTCTTTCCAGATGCACACTTATTACCTGTTGAT
TTGCCAGATATAGTTTCCTTAACAGGCAGGTAGTGATACAACTATTTTCG
TTCAGTGTGCCCAATATTTGGAATTCTCTGAAGGTTTCTTTCCACCCCTT
AGCGTCATAGCCACATAATGGCATTAACAAGACTCTTTTTTCGCATGTTG
CATTTGCAGTCAGGGAATTGAGAAGATAGCCTGGGATGCTTCTGGAGAGC
GATTGGCTGTATCATACAAAGGAGGCGATGATATCTACAAGGGTCTGATT
GCCATATATGATGCTAGAAGGACGCCACTGATTTCTTTATCTCTAATGTG
AGTTATCTTCTTATCATGGACCTTCGTAAAACTGCAGTGTGGAACTCTTT
AAAATAATGTTATTATATATGTCATTGTCGTGAGCATCAGTTGTTGAGTT
TTGTTTATTCTGTATAAACTAAATAAATGCAATGGCAGTTATGCCCTTAA
CTGATAGTTAACTTGGGAATTGGTATAATGTGAATTACAGTGGTTTTATC
AGAGGGCCAGGAGACAATCCAAAACCATTTGCCTTTTCATTTCATGACAA
GTTCAAACAGGGACCTTTGCTGTCCGTGGTAAGCCTTACAACTTCTATGT
CATTCCTTTTCTTGACTTTTTTTGTCTTTGAAACTTCTCCACTTAAGCAT
GTATCCTACCCTATAATGCATATCCGTACTTGCATGGTGGAGAACTGTTG
AGAACTTTTTGAATGGAGAATGATTCATGGAGTTGAGTCTAATCATATAA
TTCAACAATTATCGATTAATTTTGAAAAAATAAGTTAGTGATTGTCTCTT
CCACCCATGCAGTGTTGGAGCAGTGGATTCTGCTGTACCTACCCACTCAT
ATTTCGATCTCATCTTCTTCCATAGTCAATGTATACAAGGCGCTGCTAGT
TTTTCGATCTCTTATTCTTCCTTGGTGACTCTTATTTTCGGCACAGCAGG
TTGATGTACTTACATATGCAATCTAAGCTCTTAAATGAGATTTGTCACCT
AGTTTTACATGGCTATGCAAATCAAAAAGTGCTAAACATGGTACGAAAGT
TTTTGAGTCCTATTATTGTGCAAATCCCTTAAAAGCTACTTGGTTTATAA
ATGTTTATCTCCCTCAAAGCTCCATCTAGTCAGCTATGAAGAAGAATCTG
GGTCCTAGGGGTGCCACCTTTTAG

Coding sequence (CDS) from alignment at contig55:1241568..1247291+

>Chh200730.2-HH_v1 ID=Chh200730.2-HH_v1; Name=Chh200730.2; organism=Citrus hongheensis; type=CDS; length=1053bp; location=Sequence derived from: contig55:1241568..1247291+ (Citrus hongheensis
ATGCCTTCGTTTCCTCGTCCCGGCTCTGTAACAGTCTGCGAAATCAACCG
AGACTTGATTACCGCAGACAATCTATCGGATGATCGAGCTAAAGATACCT
ATGGAAAAGTTCTGGGAATGGTGTTCGCTCCAGTGCCGTTTCAGTCGGAT
GAACTGGCATCGTCATCTCCGGATAGGCAGGAGTCTGAACAGCGAGGCAG
AGAAGAGGGAAAGGGTTTGTTTTCAACATTGCATGGGATTATCAGTCACT
CCATTAAACCCCTTCTTCATCCTGATCATGTACACTTGTTACCAGAGGTT
GATCTTCAGGGAGTAAGCTGGCACCAACATAAGCACATTGTTGCATTCAT
CTCTGGTTCAACTCAGGTCATAGTTCGTGACTATGAGGATTCAGAAGGGA
AGGATGCTTGCATTTTGACTAGCGACTCTCAAAGAGATGTTAAAGTTCTT
GAGTGGAGGCCAAATGGAGGGAGATCACTTTCTGTGGGATGCAAGGGTGG
AATTTGCATTTGGGCACCCTCTTATCCAGGCAACGCCGCATCTGTTAGAT
CTGGTGCTGCCTCATTCTTGGGGGCACTCTCTAGAGGCCCTGGAACTCGA
TGGACTCTAGTCGACTTTCTCCGAAGTCAGAATGGGGAACAAATAACTGC
CCTTTCATGGGGTCCGGACGGAAGATATTTGGCATCTGCCTCGTATGAAA
GCTCATCATTTACTATATGGGACGTCGCTCAAGGGCTGGGGACACCCATT
CGACGAGGATTTGGTGGCTTATCAATTCTTAAATGGTCACCGACTGGAGA
TTACTTTTTTGCTGCAAAATTTGATGGGACATTTTATCTTTGGGAGACAA
ACACATGGACATCTGAACCATGGTCTTCAACTAGTGGCTTTGTCACGGGA
GCAACATGGGATCCTGAAGGGCGCATGATACTACTGGCTTTTGCTGGATC
TTTAACATTGGGTTCTATTCACTTCGCATCAAAGCCTCCATCATTGGATG
CACACTTATTACCTGTTGATTTGCCAGATATAGTTTCCTTAACAGGCAGG
TAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_rpt
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR045139	Aladin
IPR036322	WD40_repeat_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding