Cms210480.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Cms210480.1 vs. ExPASy TrEMBL
Match: A0A067EK65|A0A067EK65_CITSI (Ribosome biogenesis protein BMS1/TSR1 C-terminal domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g004304mg PE=4 SV=1) HSP 1 Score: 441.425 bits (1134), Expect = 2.028e-145 Identity = 263/472 (55.72%), Postives = 306/472 (64.83%), Query Frame = 0 Query: 14 MEDSKSSDEDADIKKGEILKSVSDSDEDNFAEHVEFNEGQHRRRAIFGYGVDSGDQKDSYEESEDGDSDEGEDD--------------------DNDTVDNQLSSGTEEREDNDDMENKLMLTKSSLRLCTNLIQLVYQKSASTSETLSKEVHDSSKGEESDDDEFFKPKVKGNKV-------------CLDIIFTEILKAGNRKKHMKASETVLLWVIGPKLLRKIKF------------------------QRHEGQCEDNSGSEGIENEDESAVEEWRLKKLTLQSVLMAFDFDLHMMHLNLLSRKCMKKMWQSFIVSSLTKLDWL--TRRRLNFAKQMNIAELNDLD-------------------------EMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAPPQ 401 M+DSKSSDEDADI++GEILKSVSDSDED+F E VEFN+G+H R+AIFGYGVDSGD+KDSYEE +D DSDEGEDD +N VDN LSSGTEEREDNDDMEN+L LTKSSLR C NLIQLVY KS STSETLSKEV DS +GEESD+DEFFKPKV+GNK+ C I E LK+ +++ ++ + K ++ + ++ EGQ +DNSG EGIENEDESAVEE RLKKL+L++ FD+ + +K F ++ + + + F KQMNIAELNDLD EMVEYFDPCHPVLVGGIGLG+QNVGYMQ RLKRHRWWHKKVLKSRDPII+SIGWRR QT+PVYAIEDR+GRHRMLKYTPEHMH LA FWGPLAPPQ Sbjct: 1 MDDSKSSDEDADIQRGEILKSVSDSDEDSFVERVEFNDGKHFRKAIFGYGVDSGDRKDSYEEGDDDDSDEGEDDDDDGDEGEDDDDDGDEGEDENNHNVDNHLSSGTEEREDNDDMENELKLTKSSLRRCANLIQLVYGKSTSTSETLSKEVQDSIEGEESDEDEFFKPKVEGNKLREGLDSGIVNTDDCSKIKSYEDLKSWKQEEVYESIRDRFVTGDWSKAAQRNQVSKGKSEDDDSDDAVYGDYEDLETGEKQEGQRKDNSGCEGIENEDESAVEERRLKKLSLRA-----KFDVQYDGSESPEEEMNEKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQ 467
BLAST of Cms210480.1 vs. ExPASy TrEMBL
Match: A0A2H5Q1T1|A0A2H5Q1T1_CITUN (Bms1-type G domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_187680 PE=4 SV=1) HSP 1 Score: 425.246 bits (1092), Expect = 1.446e-134 Identity = 272/478 (56.90%), Postives = 312/478 (65.27%), Query Frame = 0 Query: 4 GFVKKHVAVEMEDSKSSDEDADIKKGEILKSVSDSDEDNFAEHVEFNEGQHRRRAIFGYGVDSGDQKDSYEESEDGDSDEGEDD----------------DNDTVDNQLSSGTEEREDNDDMENKLMLTKSSLRLCTNLIQLVYQKSASTSETLSKEVHDSSKGEESDDDEFFKPKVKGNKV--CLD--IIFTE----ILKAGNRK--KHMKASETVL-LWVIGPKLLRKIKFQRHEGQCE--------------------------DNSGSEGIENEDESAVEEWRLKKLTLQSVLMAFDFDLHMMHLNLLSRKCMKKMWQSFIVSSLTKLDWL--TRRRLNFAKQMNIAELNDLD-------------------------EMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAPPQ 401 G +K VAVEM+DSK SDEDADIK+GEILKSVSDSDED+F E VEFN+G+H R+AIFGYGVDSGD+KDSYEE +D D DEGEDD +N VDN LSSGTEEREDNDDMEN+L LTKSSLR C NLIQLVY KS STSET SKEV DS +GEESD+DEFFKPKV+GNK+ LD I+ T+ I G+ K K + E++ +V G + Q +G+ E DNSG EGIENEDESAVEE RLKKL+L++ FD+ + +K F ++ + + + F KQMNIAELNDLD EMVEYFDPCHPVLVGGIGLG+QNVGYMQ RLKRHRWWHKKVLKSRDPII+SIGWRR QT+PVYAIEDR+GRHRMLKYTPEHMH LA FWGPLAPPQ Sbjct: 450 GLSEKRVAVEMDDSKCSDEDADIKRGEILKSVSDSDEDSFVERVEFNDGKHFRKAIFGYGVDSGDRKDSYEEGDDDDGDEGEDDDSDEGEDDDSDEGEDDNNYNVDNHLSSGTEEREDNDDMENELKLTKSSLRRCANLIQLVYGKSTSTSETSSKEVQDSIEGEESDEDEFFKPKVEGNKLREGLDSGIVNTDDCSKIKSYGDLKSWKQEEVYESIRDRFVTGDWSKAAQRNQVSKGKSEDDDSDDAVYGDYEDLETGEKKEGQRKDNSGCEGIENEDESAVEERRLKKLSLRA-----KFDVQYDGSESPEEEMNEKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQ 922
BLAST of Cms210480.1 vs. ExPASy TrEMBL
Match: A0A2H5Q1K8|A0A2H5Q1K8_CITUN (Bms1-type G domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_187680 PE=4 SV=1) HSP 1 Score: 421.394 bits (1082), Expect = 2.108e-133 Identity = 270/476 (56.72%), Postives = 305/476 (64.08%), Query Frame = 0 Query: 4 GFVKKHVAVEMEDSKSSDEDADIKKGEILKSVSDSDEDNFAEHVEFNEGQHRRRAIFGYGVDSGDQKDSYEESEDGDSDEGEDD----------------DNDTVDNQLSSGTEEREDNDDMENKLMLTKSSLRLCTNLIQLVYQKSASTSETLSKEVHDSSKGEESDDDEFFKPKVKGNKV--CLD--IIFTE----ILKAGNRK--KHMKASETVL-LWVIGPKLLRKIKFQRHEGQCE--------------------------DNSGSEGIENEDESAVEEWRLKKLTLQSVLMAFDFDLHMMHLNLLSRKCMKKMWQSFIVSSLTKLDWLTRRRLNFAKQMNIAELNDLD-------------------------EMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAPPQ 401 G +K VAVEM+DSK SDEDADIK+GEILKSVSDSDED+F E VEFN+G+H R+AIFGYGVDSGD+KDSYEE +D D DEGEDD +N VDN LSSGTEEREDNDDMEN+L LTKSSLR C NLIQLVY KS STSET SKEV DS +GEESD+DEFFKPKV+GNK+ LD I+ T+ I G+ K K + E++ +V G + Q +G+ E DNSG EGIENEDESAVEE RLKKL+L++ FD+ + + F KQMNIAELNDLD EMVEYFDPCHPVLVGGIGLG+QNVGYMQ RLKRHRWWHKKVLKSRDPII+SIGWRR QT+PVYAIEDR+GRHRMLKYTPEHMH LA FWGPLAPPQ Sbjct: 450 GLSEKRVAVEMDDSKCSDEDADIKRGEILKSVSDSDEDSFVERVEFNDGKHFRKAIFGYGVDSGDRKDSYEEGDDDDGDEGEDDDSDEGEDDDSDEGEDDNNYNVDNHLSSGTEEREDNDDMENELKLTKSSLRRCANLIQLVYGKSTSTSETSSKEVQDSIEGEESDEDEFFKPKVEGNKLREGLDSGIVNTDDCSKIKSYGDLKSWKQEEVYESIRDRFVTGDWSKAAQRNQVSKGKSEDDDSDDAVYGDYEDLETGEKKEGQRKDNSGCEGIENEDESAVEERRLKKLSLRA-----KFDM--------------------------------KEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQ 888
BLAST of Cms210480.1 vs. ExPASy TrEMBL
Match: V4RSF3|V4RSF3_CITCL (Bms1-type G domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10027707mg PE=4 SV=1) HSP 1 Score: 397.897 bits (1021), Expect = 7.533e-125 Identity = 263/468 (56.20%), Postives = 297/468 (63.46%), Query Frame = 0 Query: 4 GFVKKHVAVEMEDSKSSDEDADIKKGEILKSVSDSDEDNFAEHVEFNEGQHRRRAIFGYGVDSGDQKDSY--------EESEDGDSDEGEDDDNDTVDNQLSSGTEEREDNDDMENKLMLTKSSLRLCTNLIQLVYQKSASTSETLSKEVHDSSKGEESDDDEFFKPKVKGNKV--CLD--IIFTE----ILKAGNRK--KHMKASETVL-LWVIGPKLLRKIKFQRHEGQCE--------------------------DNSGSEGIENEDESAVEEWRLKKLTLQSVLMAFDFDLHMMHLNLLSRKCMKKMWQSFIVSSLTKLDWLTRRRLNFAKQMNIAELNDLD-------------------------EMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAPPQ 401 G +K VAVEM+DSK SDEDADIK+GEILKSVSDSDED+F E VEFN+GQH R+AIFGYGVDSGD+KDSY +E ED DSDEGEDD+N VDN LSS DDMEN+L LTKSSLR C NLIQLVY KS STSET SKEV DS +GEESD+DEFFKPKV+GNK+ LD I+ T+ I G+ K K + E++ +V G + Q +G+ E DNSG EGIENEDESAVEE RLKKL+L++ FD+ + + F KQMNIAELNDLD EMVEYFDPCHPVLVGGIGLG+QNVGYMQ RLKRHRWWHKKVLKSRDPII+SIGWRR QT+PVYAIEDR+GRHRMLKYTPEHMH LA FWGPLAP Q Sbjct: 418 GLSEKRVAVEMDDSKCSDEDADIKRGEILKSVSDSDEDSFVEGVEFNDGQHFRKAIFGYGVDSGDRKDSYEEGDDDDGDEGEDDDSDEGEDDNNYNVDNHLSS--------DDMENELKLTKSSLRRCANLIQLVYGKSTSTSETSSKEVQDSIEGEESDEDEFFKPKVEGNKLREGLDSGIVNTDDCSKIKSYGDLKSWKQEEVYESIRDRFVTGDWSKAAQRNQVSKGKSEDDDSDDAVYGDYEDLETGEKQEGQRKDNSGCEGIENEDESAVEERRLKKLSLRA-----KFDM--------------------------------KEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRCQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPTQ 840
BLAST of Cms210480.1 vs. ExPASy TrEMBL
Match: A0A067EJC0|A0A067EJC0_CITSI (Ribosome biogenesis protein BMS1/TSR1 C-terminal domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g004304mg PE=4 SV=1) HSP 1 Score: 363.614 bits (932), Expect = 9.664e-116 Identity = 206/382 (53.93%), Postives = 240/382 (62.83%), Query Frame = 0 Query: 84 GEDDDNDTVDNQLSSGTEEREDNDDMENKLMLTKSSLRLCTNLIQLVYQKSASTSETLSKEVHDSSKGEESDDDEFFKPKVKGNKV-------------CLDIIFTEILKAGNRKKHMKASETVLLWVIGPKLLRKIKFQR------------------------HEGQCEDNSGSEGIENEDESAVEEWRLKKLTLQSVLMAFDFDLHMMHLNLLSRKCMKKMWQSFIVSSLTKLDWL--TRRRLNFAKQMNIAELNDLD-------------------------EMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAPPQ 401 GED++N VDN LSSGTEEREDNDDMEN+L LTKSSLR C NLIQLVY KS STSETLSKEV DS +GEESD+DEFFKPKV+GNK+ C I E LK+ +++ ++ + K ++ + + EGQ +DNSG EGIENEDESAVEE RLKKL+L++ FD+ + +K F ++ + + + F KQMNIAELNDLD EMVEYFDPCHPVLVGGIGLG+QNVGYMQ RLKRHRWWHKKVLKSRDPII+SIGWRR QT+PVYAIEDR+GRHRMLKYTPEHMH LA FWGPLAPPQ Sbjct: 56 GEDENNHNVDNHLSSGTEEREDNDDMENELKLTKSSLRRCANLIQLVYGKSTSTSETLSKEVQDSIEGEESDEDEFFKPKVEGNKLREGLDSGIVNTDDCSKIKSYEDLKSWKQEEVYESIRDRFVTGDWSKAAQRNQVSKGKSEDDDSDDAVYGDYEDLETGEKQEGQRKDNSGCEGIENEDESAVEERRLKKLSLRA-----KFDVQYDGSESPEEEMNEKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQ 432
BLAST of Cms210480.1 vs. ExPASy TrEMBL
Match: A0A067E8B7|A0A067E8B7_CITSI (Ribosome biogenesis protein BMS1/TSR1 C-terminal domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g004304mg PE=4 SV=1) HSP 1 Score: 363.999 bits (933), Expect = 1.128e-115 Identity = 206/382 (53.93%), Postives = 240/382 (62.83%), Query Frame = 0 Query: 84 GEDDDNDTVDNQLSSGTEEREDNDDMENKLMLTKSSLRLCTNLIQLVYQKSASTSETLSKEVHDSSKGEESDDDEFFKPKVKGNKV-------------CLDIIFTEILKAGNRKKHMKASETVLLWVIGPKLLRKIKFQR------------------------HEGQCEDNSGSEGIENEDESAVEEWRLKKLTLQSVLMAFDFDLHMMHLNLLSRKCMKKMWQSFIVSSLTKLDWL--TRRRLNFAKQMNIAELNDLD-------------------------EMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAPPQ 401 GED++N VDN LSSGTEEREDNDDMEN+L LTKSSLR C NLIQLVY KS STSETLSKEV DS +GEESD+DEFFKPKV+GNK+ C I E LK+ +++ ++ + K ++ + + EGQ +DNSG EGIENEDESAVEE RLKKL+L++ FD+ + +K F ++ + + + F KQMNIAELNDLD EMVEYFDPCHPVLVGGIGLG+QNVGYMQ RLKRHRWWHKKVLKSRDPII+SIGWRR QT+PVYAIEDR+GRHRMLKYTPEHMH LA FWGPLAPPQ Sbjct: 56 GEDENNHNVDNHLSSGTEEREDNDDMENELKLTKSSLRRCANLIQLVYGKSTSTSETLSKEVQDSIEGEESDEDEFFKPKVEGNKLREGLDSGIVNTDDCSKIKSYEDLKSWKQEEVYESIRDRFVTGDWSKAAQRNQVSKGKSEDDDSDDAVYGDYEDLETGEKQEGQRKDNSGCEGIENEDESAVEERRLKKLSLRA-----KFDVQYDGSESPEEEMNEKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQ 432
BLAST of Cms210480.1 vs. ExPASy TrEMBL
Match: A0A2H5Q1W0|A0A2H5Q1W0_CITUN (Ribosome biogenesis protein BMS1/TSR1 C-terminal domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_187680 PE=4 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 1.231e-105 Identity = 211/382 (55.24%), Postives = 242/382 (63.35%), Query Frame = 0 Query: 84 GEDDDNDTVDNQLSSGTEEREDNDDMENKLMLTKSSLRLCTNLIQLVYQKSASTSETLSKEVHDSSKGEESDDDEFFKPKVKGNKV--CLD--IIFTE----ILKAGNRK--KHMKASETVL-LWVIGPKLLRKIKFQRHEGQCE--------------------------DNSGSEGIENEDESAVEEWRLKKLTLQSVLMAFDFDLHMMHLNLLSRKCMKKMWQSFIVSSLTKLDWL--TRRRLNFAKQMNIAELNDLD-------------------------EMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAPPQ 401 GEDD+N VDN LSSGTEEREDNDDMEN+L LTKSSLR C NLIQLVY KS STSET SKEV DS +GEESD+DEFFKPKV+GNK+ LD I+ T+ I G+ K K + E++ +V G + Q +G+ E DNSG EGIENEDESAVEE RLKKL+L++ FD+ + +K F ++ + + + F KQMNIAELNDLD EMVEYFDPCHPVLVGGIGLG+QNVGYMQ RLKRHRWWHKKVLKSRDPII+SIGWRR QT+PVYAIEDR+GRHRMLKYTPEHMH LA FWGPLAPPQ Sbjct: 54 GEDDNNYNVDNHLSSGTEEREDNDDMENELKLTKSSLRRCANLIQLVYGKSTSTSETSSKEVQDSIEGEESDEDEFFKPKVEGNKLREGLDSGIVNTDDCSKIKSYGDLKSWKQEEVYESIRDRFVTGDWSKAAQRNQVSKGKSEDDDSDDAVYGDYEDLETGEKKEGQRKDNSGCEGIENEDESAVEERRLKKLSLRA-----KFDVQYDGSESPEEEMNEKDGAKFHCGQPNEIGLVDQMKEEIEFRKQMNIAELNDLDEVTRLELEGFRTGTYLRMEIHDVPFEMVEYFDPCHPVLVGGIGLGEQNVGYMQVRLKRHRWWHKKVLKSRDPIIVSIGWRRFQTIPVYAIEDRSGRHRMLKYTPEHMHCLATFWGPLAPPQ 430
BLAST of Cms210480.1 vs. ExPASy TrEMBL
Match: V4T7C7|V4T7C7_CITCL (Bms1-type G domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10018567mg PE=4 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 6.934e-96 Identity = 218/473 (46.09%), Postives = 273/473 (57.72%), Query Frame = 0 Query: 4 GFVKKHVAVEMEDSKSSDEDADIKKGEILKSVSDSDEDNFAEHVEFNEGQHRRRAIFGYGVDSGDQKDSYEESEDGDSDEGEDDDNDTVDNQLSSGTEEREDNDDMEN-----KLMLTKSSLRLCTNLIQLVYQKSASTSETLSKEVHDSSKGEESDDDEFFKPKVKGNKVCLDIIFTEILKAGNRK----KHMKASETVLLW-------------VIG--PKLLRKIKF------------------------QRHEGQCEDNSGSEGIENEDESAVEEWRLKKLTLQSVLMAFDFDLHMMHLNLLSRKCMKKMWQSFIVSSLTKLDWLTRRR--LNFAKQMNIAELNDLDE-------------------------MVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAPPQ 401 G + H A +M+ S+SSDE+ D K GE +KS ++ED EHVEFN+G+ RR+AIFG V+ GD KDS EE ED + D+ ++D+ VD Q SSG+EE + +D M N + +L +++LR NL QLVY KS S + T SKEV DSS+ EE+DDD FFKPK +GNK E + +GN K+ E + W V G K R+ + ++HEG DNSGS+ E+EDESAVEE RLKKL L++ FD +K F ++ + + + + KQMN+AELNDLDE MVEYFDPCHPVLVGGI LG++NVGYMQARLKRHRW HKKVLK+RDPII+SIGWRR QT PVY+IEDRNGR+RMLKYTPEHMH LA FWGPLAPPQ Sbjct: 439 GLGENHRAEDMDGSESSDEETDAKNGETIKS--GNNEDKLVEHVEFNDGRLRRKAIFGKAVNHGDPKDSDEEDEDDEHDDHDEDN---VDYQSSSGSEEGQYDDGMGNISKWKESLLGRTALRQSMNLKQLVYGKSTSLA-TSSKEVQDSSEDEETDDD-FFKPKGEGNKK-----LREGMDSGNVNTDDCSKFKSYEDLKYWKEEEVYESIRDRFVTGDWSKAARRNQVSKANSEDDDRDDAVYGDFEDLETGEKHEGHRVDNSGSDANEHEDESAVEERRLKKLALRA-----KFDAQYNGSESPEEDMDEKDGGKFHRGQPNEVGLIDKMKEEIELRKQMNVAELNDLDEITRLEIEGSRTGTYLRLEIHGVPFEMVEYFDPCHPVLVGGISLGEENVGYMQARLKRHRW-HKKVLKTRDPIIVSIGWRRFQTTPVYSIEDRNGRYRMLKYTPEHMHCLATFWGPLAPPQ 893
BLAST of Cms210480.1 vs. ExPASy TrEMBL
Match: A0A2H5PLP5|A0A2H5PLP5_CITUN (Bms1-type G domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_148170 PE=4 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 1.445e-93 Identity = 216/473 (45.67%), Postives = 271/473 (57.29%), Query Frame = 0 Query: 4 GFVKKHVAVEMEDSKSSDEDADIKKGEILKSVSDSDEDNFAEHVEFNEGQHRRRAIFGYGVDSGDQKDSYEESEDGDSDEGEDDDNDTVDNQLSSGTEEREDNDDMEN-----KLMLTKSSLRLCTNLIQLVYQKSASTSETLSKEVHDSSKGEESDDDEFFKPKVKGNKVCLDIIFTEILKAGNRK----KHMKASETVLLW-------------VIG--PKLLRKIKF------------------------QRHEGQCEDNSGSEGIENEDESAVEEWRLKKLTLQSVLMAFDFDLHMMHLNLLSRKCMKKMWQSFIVSSLTKLDWLTRRR--LNFAKQMNIAELNDLDE-------------------------MVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAPPQ 401 G + A +M+ S+SSDE+ D K E +KS ++ED EHVEFN+G+ RR+AIFG V+ GD KDS EE ED + D+ ++D+ VD Q SSG+EE + +D M N + +L +++LR NL QLVY KS S + T SKEV DSS+ EE+DDD FFKPK +GNK E + +GN K+ E + W V G K R+ + ++HEG DNSGS+ E+EDESAVEE RLKKL L++ FD +K F ++ + + + + KQMN+AELNDLDE MVEYFDPCHPVLVGGI LG++NVGYMQARLKRHRW HKKVLK+RDPII+SIGWRR QT PVY+IEDRNGR+RMLKYTPEHMH LA FWGPLAPPQ Sbjct: 439 GLGESQRAEDMDGSESSDEETDAKNCETIKS--GNNEDKLVEHVEFNDGRLRRKAIFGKAVNHGDPKDSDEEDEDDEHDDHDEDN---VDYQSSSGSEEGQYDDSMGNISKWKESLLGRTALRQSMNLKQLVYGKSTSLA-TSSKEVQDSSEDEETDDD-FFKPKGEGNKK-----LREGMDSGNVNTDDCSKFKSYEDLKYWKGEEVYESIRDRFVTGDWSKAARRNQVSKANFEDDDRDDAVYGDFEDLETGEKHEGHRVDNSGSDANEHEDESAVEERRLKKLALRA-----KFDAQYNGSESPEEDMDEKDGGKFHRGQPNEVGLIDKMKEEIELRKQMNVAELNDLDEITRLEIEGFRTGTYLRLEIHGVPFEMVEYFDPCHPVLVGGISLGEENVGYMQARLKRHRW-HKKVLKTRDPIIVSIGWRRFQTTPVYSIEDRNGRYRMLKYTPEHMHCLATFWGPLAPPQ 893
BLAST of Cms210480.1 vs. ExPASy TrEMBL
Match: A0A2H5QDT4|A0A2H5QDT4_CITUN (AATF leucine zipper-containing domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_220560 PE=4 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 3.785e-85 Identity = 174/266 (65.41%), Postives = 194/266 (72.93%), Query Frame = 0 Query: 1 MPMGFVKKHVAVEMEDSKSSDEDADIKKGEILKSVSDSDEDNFAEHVEFNEGQHRRRAIFGYGVDSGDQKDSYEESEDGDSDEGEDDDNDTVDNQLSSGTEEREDN--DDMENKLMLTKSSLRLCTNLIQLVYQKSASTSETLSKEVHDSSKGEESDDDEFFKPKVKGNK------VCLDIIFTEILKAG--NRKKHMKASETVLLWVIGPKLLRKIKFQRHEGQCEDNSGSEGIENEDESAVEEWRLKKLTLQSVLMA---FDFD 253 MPMGFVKKHVAVEMEDSKSSDEDADIKKGEILKSVSDSDEDNFAE+VEFNEGQHRRRAIFGYGVDSGDQKDSYEE ED DSDEG DDDNDTVDNQLSSGTEEREDN + +++ S L L N + Y + + LSKEVHDSSKGEE+DDDEFFKPKVKGNK + + + KA N+ K+ + + ++HEGQCEDNSGSEGIENEDESAVEEWRLKKLTL++ A F FD Sbjct: 1 MPMGFVKKHVAVEMEDSKSSDEDADIKKGEILKSVSDSDEDNFAEYVEFNEGQHRRRAIFGYGVDSGDQKDSYEEGEDDDSDEGADDDNDTVDNQLSSGTEEREDNGISFILTIIVMQYSVLDLKENTL---YTGNQHQHQKLSKEVHDSSKGEENDDDEFFKPKVKGNKEEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNSGSEGIENEDESAVEEWRLKKLTLRAKFDAQYPFSFD 263
BLAST of Cms210480.1 vs. ExPASy Swiss-Prot
Match: BMS1_HUMAN (Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens OX=9606 GN=BMS1 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.137e-37 Identity = 60/94 (63.83%), Postives = 77/94 (81.91%), Query Frame = 0 Query: 306 EMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAP 399 E V+ FDP +P+++GG+G + NVGY+Q RLK+HRW+ KK+LKSRDPII S+GWRR QT+P+Y IED NGR R+LKYTP+HMH A FWGP+ P Sbjct: 896 EFVQNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWY-KKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFWGPITP 988
BLAST of Cms210480.1 vs. ExPASy Swiss-Prot
Match: BMS1_SCHPO (Ribosome biogenesis protein bms1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bms1 PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 2.828e-32 Identity = 58/114 (50.88%), Postives = 78/114 (68.42%), Query Frame = 0 Query: 301 LNDLD-EMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAPPQMRSCCPKFIQQS 413 +ND+ E VE+FD +PV+VGG+ +Q G +Q R+KRHRW HKK+LK+ DP+I S+GWRR Q++PVY+I D R+RMLKYTPEHMH F+GP P C + + S Sbjct: 730 INDVPFEFVEHFDSRYPVVVGGLLPNEQRYGLVQVRIKRHRW-HKKILKTNDPLIFSMGWRRFQSIPVYSISDSRTRNRMLKYTPEHMHCFGTFYGPFVAPNSGFCAVQSVANS 842
BLAST of Cms210480.1 vs. ExPASy Swiss-Prot
Match: BMS1_YEAST (Ribosome biogenesis protein BMS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BMS1 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.278e-24 Identity = 50/108 (46.30%), Postives = 72/108 (66.67%), Query Frame = 0 Query: 306 EMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAPPQMRSCCPKFIQQS 413 E V+ F+P P+++GG+ + G ++ARL+RHRW HKK+LK+ DP+++S+GWRR QT+P+Y D R RMLKYTPEH + A F+GPL P C + + S Sbjct: 799 EFVKNFNPKFPIVMGGLLPTEIKFGIVKARLRRHRW-HKKILKTNDPLVLSLGWRRFQTLPIYTTTDSRTRTRMLKYTPEHTYCNAAFYGPLCSPNTPFCGVQIVANS 905
BLAST of Cms210480.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:2060615-2067281 REVERSE LENGTH=1175) HSP 1 Score: 190.274 bits (482), Expect = 9.259e-53 Identity = 80/95 (84.21%), Postives = 88/95 (92.63%), Query Frame = 0 Query: 306 EMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAPP 400 EMVE+FDPCHP+LVGGIG G+ NVGYMQARLK+HRW HKKVLK+RDPII+SIGWRR QT+PV+AIEDRNGRHRMLKYTPEHMH LA FWGPL PP Sbjct: 794 EMVEFFDPCHPILVGGIGFGEDNVGYMQARLKKHRW-HKKVLKTRDPIIVSIGWRRYQTIPVFAIEDRNGRHRMLKYTPEHMHCLASFWGPLVPP 887
BLAST of Cms210480.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:2061837-2067281 REVERSE LENGTH=932) HSP 1 Score: 189.889 bits (481), Expect = 9.353e-53 Identity = 80/95 (84.21%), Postives = 88/95 (92.63%), Query Frame = 0 Query: 306 EMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAPP 400 EMVE+FDPCHP+LVGGIG G+ NVGYMQARLK+HRW HKKVLK+RDPII+SIGWRR QT+PV+AIEDRNGRHRMLKYTPEHMH LA FWGPL PP Sbjct: 794 EMVEFFDPCHPILVGGIGFGEDNVGYMQARLKKHRW-HKKVLKTRDPIIVSIGWRRYQTIPVFAIEDRNGRHRMLKYTPEHMHCLASFWGPLVPP 887
BLAST of Cms210480.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:2060615-2067281 REVERSE LENGTH=1147) HSP 1 Score: 189.889 bits (481), Expect = 1.211e-52 Identity = 80/95 (84.21%), Postives = 88/95 (92.63%), Query Frame = 0 Query: 306 EMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKRHRWWHKKVLKSRDPIIISIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHRLAMFWGPLAPP 400 EMVE+FDPCHP+LVGGIG G+ NVGYMQARLK+HRW HKKVLK+RDPII+SIGWRR QT+PV+AIEDRNGRHRMLKYTPEHMH LA FWGPL PP Sbjct: 766 EMVEFFDPCHPILVGGIGFGEDNVGYMQARLKKHRW-HKKVLKTRDPIIVSIGWRRYQTIPVFAIEDRNGRHRMLKYTPEHMHCLASFWGPLVPP 859 The following BLAST results are available for this feature:
BLAST of Cms210480.1 vs. ExPASy TrEMBL
Analysis Date: 2024-02-02 (Blastp of Citrus mangshanensis cv. MSYG v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Cms210480.1 vs. ExPASy Swiss-Prot
Analysis Date: 2024-02-02 (Blastp of Citrus mangshanensis cv. MSYG v1.0 proteins vs UniProt Swissprot) Total hits: 3 Position : 0 Zoom : x 1
BLAST of Cms210480.1 vs. Araport11
Analysis Date: 2024-02-02 (Blastp of Citrus mangshanensis cv. MSYG v1.0 proteins vs Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus mangshanensis cv. MSYG v1.0 proteins
Date Performed: 2024-02-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Cms210480.1-MSYG_v1 ID=Cms210480.1-MSYG_v1; Name=Cms210480.1; organism=Citrus mangshanensis; type=mRNA; length=1240bpback to top protein sequence of Cms210480.1-MSYG_v1 >Cms210480.1-MSYG_v1 ID=Cms210480.1-MSYG_v1; Name=Cms210480.1-MSYG_v1; organism=Citrus mangshanensis; type=polypeptide; length=413bpback to top mRNA from alignment at contig175:2053267..2056677- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3411bp; location=Sequence derived from: contig175:2053267..2056677- (Citrus mangshanensisback to top Coding sequence (CDS) from alignment at contig175:2053267..2056677- >Cms210480.1-MSYG_v1 ID=Cms210480.1-MSYG_v1; Name=Cms210480.1; organism=Citrus mangshanensis; type=CDS; length=1240bp; location=Sequence derived from: contig175:2053267..2056677- (Citrus mangshanensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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