Cms210580.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cms210580.1 vs. ExPASy TrEMBL
Match: A0A067F459|A0A067F459_CITSI (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g010496mg PE=4 SV=1) HSP 1 Score: 1040.8 bits (2690), Expect = 0.000e+0 Identity = 499/509 (98.04%), Postives = 503/509 (98.82%), Query Frame = 0 Query: 1 MNSSATATILPQPFLPHQQNPNQNLTTRPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPETVAGELYEND 509
MNSSATATILPQPFLPHQQNPNQNLTT PQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAAL+FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA+VVFDAM VKSSFTWNAMI GYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFA QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL+YFDIMKKIY VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRR MKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS+LELLSFDLKLCGYVPETVAGELYEND
Sbjct: 1 MNSSATATILPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
BLAST of Cms210580.1 vs. ExPASy TrEMBL
Match: A0A2H5QDR5|A0A2H5QDR5_CITUN (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_220490 PE=4 SV=1) HSP 1 Score: 1024.23 bits (2647), Expect = 0.000e+0 Identity = 488/509 (95.87%), Postives = 499/509 (98.04%), Query Frame = 0 Query: 1 MNSSATATILPQPFLPHQQNPNQNLTTRPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPETVAGELYEND 509
MNSSATATILPQPFLPHQQNPNQNLTT PQISIQTNN KSTVNPTVQWTSSISRHCRSGRIAEAAL+FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA+VVFDAM VKSSFTWNAMI GYMR GDIESAV+MFDEMPVR+AISWTALLNGF KRGYFEEALECFREMQISGVEPDYVTI+SVLNACANVG LGIGLWIHR+VLKQDFKDNV+VCNTLIDLYSRCGCIEFA QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG++YFDIMKKIY VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRR MKGRGIQKKPGLSSIEIGSGIHEFMAG+RSHIESEHIYS+LELLSFDLKLCGYVPETVAGELYEND
Sbjct: 1 MNSSATATILPQPFLPHQQNPNQNLTTTPQISIQTNNRKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRSGDIESAVKMFDEMPVRNAISWTALLNGFAKRGYFEEALECFREMQISGVEPDYVTIVSVLNACANVGMLGIGLWIHRFVLKQDFKDNVRVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGVRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGNRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 509
BLAST of Cms210580.1 vs. ExPASy TrEMBL
Match: V4RS23|V4RS23_CITCL (DYW domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10028449mg PE=4 SV=1) HSP 1 Score: 883.634 bits (2282), Expect = 0.000e+0 Identity = 424/439 (96.58%), Postives = 431/439 (98.18%), Query Frame = 0 Query: 71 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPETVAGELYEND 509
MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLA+VVFDAM VKSSFTWNAMI GYMR GDIESAV+MFDEMPVR+AISWTALLNGF KRGYFEEALECFREMQISGVEPDYVTIISVLNACANVG LGIGLWIHR+VLKQDFKDNV+VCNTLIDLYSRCGCIEFA QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL+YFDIMKKIY VSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRR MKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYS+LELLSFDLKLCGYVPETVAGELYEND
Sbjct: 1 MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRNGDIESAVKMFDEMPVRNAISWTALLNGFAKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGMLGIGLWIHRFVLKQDFKDNVRVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKLCGYVPETVAGELYEND 439 HSP 2 Score: 83.5741 bits (205), Expect = 2.949e-13 Identity = 75/284 (26.41%), Postives = 125/284 (44.01%), Query Frame = 0 Query: 42 VNPTVQWTSSISRHCRSGRIA------------------------------EAALQ-FTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRY--VLKQDFKDNVKV--CNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVG 290
V + W + I + R+G I E AL+ F M + G P+++T I++L+ CA+ L +G IH V K ++NV V L+D+Y++ G ++ A VF M ++ +WN++I G+ +NGFV EALE F MQ G +PD V+ L AC++ G + GL RY ++K+ ++ + ++ ++DLYSR G +E A V + M + N +++G
Sbjct: 76 VKSSFTWNAMIDGYMRNGDIESAVKMFDEMPVRNAISWTALLNGFAKRGYFEEALECFREMQISGVEPDYVTIISVLNACANV--GMLGIGLWIHRFVLKQDF-KDNVRVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFA--------------------------VNGFVG-----EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGL---RYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKP----NEVVLG 318
BLAST of Cms210580.1 vs. ExPASy TrEMBL
Match: A0A1R3K9M8|A0A1R3K9M8_9ROSI (Pentatricopeptide repeat-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_10190 PE=4 SV=1) HSP 1 Score: 733.406 bits (1892), Expect = 0.000e+0 Identity = 344/507 (67.85%), Postives = 419/507 (82.64%), Query Frame = 0 Query: 5 ATATILPQPFLPHQQNPNQNLTTRP--QISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPETVAGELYEND 509
AT+ P L +Q +Q + P QIS+++ ++P V WTSS+SRHC +GRI+EAA +FTRM + G PNHITF+T+LSGCADFPS+ LGA+IHG VCKLGLDR NVMVGTAL DMYAK G++++A +VFD M VK+S +WN MI GYMR G+ E AV MFDEMP R+ ISWTAL+NGF KRG+ EEAL+ FREM I GV+PDYV II+VL ACAN+G LG+GLWIHR+V+KQ F+ NV+V N+LID+YSRCGCIEF+ +VF +M KRTLVSWNSIIVGFAVNGF EAL+YF++MQKEGF+PDGVSFTGALTACSHAGL+++GL YFDIM+++Y +SPRIEH+GCIVDLYSRAG+LE AL+VV+NMPMKPNEVVLGSLLAACR G++ LAE+++K LV LDPG DSNYVLL+N+YAAVG+W+GA K+RRRMK GIQKKPG SSIEI +H+F+AGD+SH E+E IY +LELLSFDL L GY PETVA ELYE+D
Sbjct: 9 ATSLTQTSPLLAYQNPKSQPSLSNPNHQISLKS------LDPVVSWTSSVSRHCNAGRISEAAEEFTRMRISGVEPNHITFVTILSGCADFPSKSRALGALIHGYVCKLGLDRENVMVGTALTDMYAKCGQVEVAKLVFDVMEVKNSRSWNTMIDGYMRNGEYEKAVEMFDEMPQRNVISWTALINGFAKRGFHEEALDWFREMMIFGVKPDYVAIIAVLTACANLGALGVGLWIHRFVMKQSFRYNVRVNNSLIDMYSRCGCIEFSREVFGKMQKRTLVSWNSIIVGFAVNGFADEALKYFDAMQKEGFEPDGVSFTGALTACSHAGLVDEGLHYFDIMRRVYRISPRIEHFGCIVDLYSRAGKLEQALDVVKNMPMKPNEVVLGSLLAACRDHGNVSLAEKIVKDLVALDPGSDSNYVLLSNIYAAVGRWEGASKVRRRMKALGIQKKPGFSSIEICGCVHDFVAGDKSHTETECIYEMLELLSFDLMLSGYAPETVARELYESD 509
BLAST of Cms210580.1 vs. ExPASy TrEMBL
Match: A0A2C9V980|A0A2C9V980_MANES (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_09G091500 PE=4 SV=1) HSP 1 Score: 728.013 bits (1878), Expect = 0.000e+0 Identity = 340/491 (69.25%), Postives = 410/491 (83.50%), Query Frame = 0 Query: 19 QNPNQNLTTRPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPETVAGELYEND 509
QNP N T++P ++ + KS ++ TV WT+SISRHCR+G++ EAA QFT+M L G PNHITF TLLSGCADFPS LG +IH V K G D NVMVGTA++DMYAK G+++LA + FD + +K+S +WN M+ GYMR G+IE A+ +FDEMP RDAISWT ++GFVK+G FE+ LE FREMQ+S +EPDYVTII+VL+ACAN+G LG+GLWIHRYVLKQ+F+DN+++ N+LI +YSRCGCIE A QVF +M KRTLVSWNSIIVGFA NGF EALEYF MQKEGFKPDGVSFTGALTACSHAGL++ GL+YFD+MKK+Y +SPRIEHYGCIVDLYSRAGRLEDA +V+ENM MKPNEV+LGSLLAACRT ++ LAERLM YL DLDPGVDSN+VLLAN+YAAVG+WDGAGK+RRRMK GIQKKPG+SSIE+G IHEF+AGD+SH E+EHIY L+LL DLKLCGYVP+T+ ++YEND
Sbjct: 61 QNP-VNPTSKPNFPLKQQSDKS-IDLTVAWTNSISRHCRNGQLPEAASQFTQMLLAGVEPNHITFTTLLSGCADFPSHGKSLGPLIHSYVRKRGFDTRNVMVGTAVVDMYAKCGQVELARLCFDELKIKNSVSWNTMMDGYMRNGEIEDAIELFDEMPERDAISWTVFIDGFVKKGLFEQGLEWFREMQVSMMEPDYVTIIAVLSACANLGALGLGLWIHRYVLKQEFRDNIRISNSLIVMYSRCGCIEIARQVFHKMLKRTLVSWNSIIVGFATNGFAEEALEYFVLMQKEGFKPDGVSFTGALTACSHAGLVDKGLKYFDVMKKVYKLSPRIEHYGCIVDLYSRAGRLEDAWSVIENMAMKPNEVILGSLLAACRTGENVELAERLMNYLADLDPGVDSNFVLLANIYAAVGRWDGAGKVRRRMKALGIQKKPGISSIEVGCSIHEFVAGDKSHYETEHIYETLQLLYHDLKLCGYVPDTI-NDVYEND 548
BLAST of Cms210580.1 vs. ExPASy TrEMBL
Match: A0A1Q3D4I1|A0A1Q3D4I1_CEPFO (PPR domain-containing protein/PPR_1 domain-containing protein/PPR_2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_30795 PE=4 SV=1) HSP 1 Score: 728.013 bits (1878), Expect = 0.000e+0 Identity = 338/493 (68.56%), Postives = 411/493 (83.37%), Query Frame = 0 Query: 17 HQQNPNQNLTTRPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPETVAGELYEND 509
HQ T +IS+ T + V+ V WTSSISR C+SG++ EAA +FTRM L G PNHITFITLLSGCADFP + F GA++HG V KLGL +NVMVGTA++ MY KFGR+ LA +VFDAM VK+S +WN MI GYMR G+++ A+++FDEMPVRD ISWTAL+NGFVK G FE+ALECF EM IS VEPDYVT+I+VL+ACAN+G LG+G WIHR+VL+QDFK+NV+V N+L+D+Y+RCGC++FA QVF++M KRTLVSWNSI+VGFA NG EALEYF+ MQK KPDGVSFTGALTACSH GL+++GL+YF+IMK++Y +SPRIEHYGC+VDLYSRAGRLE+A+ V+ENMPM PN VV+GSLLAACRT+GDI AERLMKYLV+LDP +DSNYVLLANMYAAVG+WDG+GKIR MK GIQKKPG+SSIEIG IHEF+AGD+SHI++E IY+ L+LLS DLK+CGY+PET+ ELYEND
Sbjct: 28 HQHQHQTKPTKYQRISLSTKTNP--VDVIVSWTSSISRRCQSGQLPEAAAEFTRMRLSGVTPNHITFITLLSGCADFPLESEFFGALLHGYVRKLGLVGDNVMVGTAVIGMYVKFGRIGLARLVFDAMEVKNSVSWNTMIDGYMRYGEVDDAIKLFDEMPVRDKISWTALINGFVKNGRFEQALECFSEMLISEVEPDYVTMIAVLSACANLGALGLGCWIHRFVLEQDFKNNVRVSNSLVDMYARCGCVDFARQVFEKMPKRTLVSWNSIMVGFAANGLAEEALEYFDLMQKYELKPDGVSFTGALTACSHTGLVDEGLRYFNIMKRVYRISPRIEHYGCVVDLYSRAGRLEEAMRVIENMPMMPNAVVVGSLLAACRTRGDINFAERLMKYLVELDPSIDSNYVLLANMYAAVGRWDGSGKIRAMMKALGIQKKPGISSIEIGCSIHEFVAGDKSHIDTECIYATLQLLSIDLKICGYMPETIVRELYEND 518
BLAST of Cms210580.1 vs. ExPASy TrEMBL
Match: A0A834SKY6|A0A834SKY6_9FABA (Pentatricopeptide repeat-containing protein OS=Senna tora OX=362788 GN=G2W53_037910 PE=4 SV=1) HSP 1 Score: 725.317 bits (1871), Expect = 0.000e+0 Identity = 340/512 (66.41%), Postives = 419/512 (81.84%), Query Frame = 0 Query: 4 SATATILPQPFLPHQQN--PNQNLTTRPQISIQ----TNNSKSTVNPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPETVAGELYEND 509
+A++ LPQP P N P ++ P I Q + +KST +PTV WTSSI+ CR+G++ EAA +F RM G PNHITF+TLLS CADFP + GA IH KLGLD ++VMVGTA++DMYAK GR+DLA + FD M VK+ +WN MI GYMR G+ E A+++FDEMPV++ ISWTAL+ GFVKR Y E+ALECFREMQ++GV PDYVTII+VL ACAN+GTLG+GLW++R ++++DF+DNV+V N+LID+YSRCGCIEFA QVF++M +RTLVSWNSIIVGFAVNG +AL++FNSMQ+EGFKPDGVS+TGALTACSHAGLI++GLQ FD MK+++ ++P IEHYGCIVDLYSRAG+LE+ALNV++ MPMKPNEVVLGSLLAACRT+GD+ LAE++M YLV+LDPG DSNYVLLAN+YAAVGKWDGA K+RR MK RGIQKKPG SSIEI S IH F+AGD+SH+E + IYS+LELLSFDLKLCGYVPE+ E YE+D
Sbjct: 7 TASSIQLPQPEPPTAPNHHPCLTFSSSPHIPKQRLSLSPTNKST-HPTVLWTSSIAHRCRNGQLLEAASEFARMRQAGVEPNHITFVTLLSACADFPLPTISFGASIHAYTRKLGLDMSDVMVGTAVVDMYAKCGRVDLARLAFDYMGVKNLVSWNTMIDGYMRNGEFEDAIKLFDEMPVKNVISWTALIGGFVKRDYHEQALECFREMQLAGVAPDYVTIIAVLAACANLGTLGLGLWVNRLIMREDFRDNVRVSNSLIDMYSRCGCIEFARQVFEKMSQRTLVSWNSIIVGFAVNGLADDALDFFNSMQREGFKPDGVSYTGALTACSHAGLIDEGLQIFDKMKRVHRITPTIEHYGCIVDLYSRAGKLEEALNVIKKMPMKPNEVVLGSLLAACRTQGDVSLAEKVMNYLVELDPGGDSNYVLLANIYAAVGKWDGANKVRRTMKARGIQKKPGFSSIEIDSSIHNFVAGDKSHLEKDCIYSVLELLSFDLKLCGYVPESSVKESYEDD 517
BLAST of Cms210580.1 vs. ExPASy TrEMBL
Match: A0A2N9FND9|A0A2N9FND9_FAGSY (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16654 PE=4 SV=1) HSP 1 Score: 724.546 bits (1869), Expect = 0.000e+0 Identity = 331/477 (69.39%), Postives = 405/477 (84.91%), Query Frame = 0 Query: 33 IQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPETVAGELYEND 509
+ S ++P V WTSSI+RHCR+G++A+AA +F RM L G PNH+TF+TL SGCADFP + + G+ IH V K GL NNVMVGTALLDMYAK R+DLA +VFD M VK+S +WN MI GYMR G IE A+ +FD+MP RDAISWTAL+ GFVK+ +FE+AL F+EMQ+SGVEPDYVTII+VL+ACAN+GTLG+GLW++R+V+KQD DN+++ N+LID+YSRCGCIEFA Q+F++M RTLVSWNSIIVGFAVNG+V EAL++F+ MQKEGFKPDG+SFTGALTACSHAGL+++GLQ+FD MK+++ ++PRIEHYGCIVDLYSRAGRLEDALNV+ENMPMKPNEVVLGSLLAACRT G++ LAERLM YL +LDPG DSNYVLLAN+YAA+G+WDGAGKIRR+MK RGIQKKPG SSIEI IHEF+AGD H E++HI+++LE LSF+LKLCGYVP+T E YE+D
Sbjct: 28 VSLRQSNKPIDPVVSWTSSIARHCRNGQLAQAAAEFQRMRLAGIEPNHVTFVTLFSGCADFPLESVVFGSSIHAYVRKFGLLTNNVMVGTALLDMYAKCSRVDLARMVFDEMGVKNSVSWNTMINGYMRNGKIEDAIDLFDQMPKRDAISWTALIGGFVKKDHFEQALLWFQEMQLSGVEPDYVTIIAVLSACANLGTLGLGLWMNRFVMKQDMGDNIRISNSLIDMYSRCGCIEFARQIFEKMPTRTLVSWNSIIVGFAVNGYVEEALQFFSLMQKEGFKPDGISFTGALTACSHAGLVDEGLQFFDDMKRVHRITPRIEHYGCIVDLYSRAGRLEDALNVIENMPMKPNEVVLGSLLAACRTHGNVSLAERLMNYLFELDPGGDSNYVLLANIYAALGRWDGAGKIRRKMKARGIQKKPGSSSIEIDCSIHEFVAGDTVHAETDHIHAMLEFLSFELKLCGYVPQTFEKESYEDD 504
BLAST of Cms210580.1 vs. ExPASy TrEMBL
Match: A0A2P5BEP9|A0A2P5BEP9_TREOI (Tetratricopeptide-like helical domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_323900 PE=4 SV=1) HSP 1 Score: 723.005 bits (1865), Expect = 0.000e+0 Identity = 340/498 (68.27%), Postives = 410/498 (82.33%), Query Frame = 0 Query: 12 QPFLPHQQNPNQNLTTRPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPETVAGELYEND 509
QP LP + +S+ + + P ++WTSSI+R CRSGR+AEAA+QF++M L G PNHITFITLLSGCADFPS+ L GA IHG KLGLD ++VMVGTA+LDMYAK G + A VVFD ++VK+S TWN MI GYMR G +E+AV +FDEMP RD ISWT+L+ GFVKRG+ E+ALE FREMQ+SGVEPDYVT+I+VL ACA++GT+G+GLW++R+V+ ++FKDN+K+ N+LID+YSRCGCIEFA QVF++M RTLVSWNS+IVGFAVNG EALE+FN MQKEGFKPDGVSFTGALTACSHAGL+++GL +F+ MK+++G+ RIEHYGCIVDLYSRAGRLEDALNV+ENMPMKPNEVVLGSLLAACRT GDI LAERLMKYL +LDPG DSNYVLLAN+YAAVG+WDGA K+R+RMK RGIQK PG SSIEI IHEF+AGD SH+E+E IYS+LELLSF+LK G+V E + E YE D
Sbjct: 30 QPVLPIKPRSKD-------LSVSQRDLHKPIEPVIKWTSSIARLCRSGRLAEAAVQFSQMRLAGLEPNHITFITLLSGCADFPSESLKFGASIHGYARKLGLDTSHVMVGTAILDMYAKCGLVGFARVVFDELMVKNSVTWNTMIDGYMRNGKVENAVEVFDEMPERDRISWTSLIGGFVKRGHSEKALEWFREMQVSGVEPDYVTVIAVLAACADLGTVGLGLWMNRFVINEEFKDNIKISNSLIDMYSRCGCIEFARQVFEKMPIRTLVSWNSMIVGFAVNGLAEEALEFFNLMQKEGFKPDGVSFTGALTACSHAGLVDEGLLFFENMKRVHGIRHRIEHYGCIVDLYSRAGRLEDALNVIENMPMKPNEVVLGSLLAACRTHGDITLAERLMKYLFELDPGGDSNYVLLANVYAAVGRWDGANKVRKRMKARGIQKTPGFSSIEIDCNIHEFVAGDHSHVEAECIYSMLELLSFELKASGFVSENILRESYEED 520
BLAST of Cms210580.1 vs. ExPASy TrEMBL
Match: A0A1R3JLK7|A0A1R3JLK7_COCAP (Pentatricopeptide repeat-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_05326 PE=4 SV=1) HSP 1 Score: 718.383 bits (1853), Expect = 0.000e+0 Identity = 340/508 (66.93%), Postives = 414/508 (81.50%), Query Frame = 0 Query: 6 TATILPQ--PFLPHQQNPNQNLTTRP--QISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPETVAGELYEND 509
T T L Q P + +Q +Q + P QIS+++++ P V WTSS+SRHC +GRI+EAA +FTRM + G PNHITF+T+ SGCA FPS+ LGA+IHG VCKLGLDR NVMVGTAL +MYAK G+M++A +VFD M VK+S +WN MI GYMR G+ + AV MFDEMP R+ ISWTAL+NGF KRG+ EEAL+ FREM I GV+PDYVTII+V+ ACAN+G LG+GLWIHR+V+KQ F+DNV+V N+LID+YSRCGCIEFA +VF +M KRTLVSWNSIIVGFAVNGF EAL+YF++MQKEGFKPDGVSFTGALTACSHAGL+++GL YFDIMK++Y +SPRIEH+GCIVDLYSRAG LE AL++V+NMPMKPNE+VLGSLLAACR G++ LAE+++K LV LD DSNYVLL+N+YAA G+W+GA K+RRRMK GIQKKPG SSIEI +HEF+AGD+SH E+E IY +LELLSFDL L GY PETV LYE+D
Sbjct: 8 TPTSLTQTCPLISYQNPKSQPSLSNPNHQISLKSSD------PVVSWTSSLSRHCSAGRISEAAEEFTRMKISGVQPNHITFVTIFSGCAAFPSKSRALGALIHGYVCKLGLDRENVMVGTALTEMYAKCGQMEVAKLVFDVMEVKNSRSWNTMIDGYMRNGEYKKAVEMFDEMPQRNVISWTALINGFAKRGFHEEALDWFREMMIFGVKPDYVTIIAVVTACANLGALGVGLWIHRFVMKQSFRDNVRVNNSLIDMYSRCGCIEFAREVFGKMQKRTLVSWNSIIVGFAVNGFADEALKYFDAMQKEGFKPDGVSFTGALTACSHAGLVDEGLHYFDIMKRVYRISPRIEHFGCIVDLYSRAGMLEQALDIVKNMPMKPNEIVLGSLLAACRDHGNVSLAEKIVKDLVALDTVSDSNYVLLSNIYAADGRWEGASKVRRRMKALGIQKKPGFSSIEICGFVHEFVAGDKSHTETECIYEMLELLSFDLMLSGYAPETVVRGLYESD 509
BLAST of Cms210580.1 vs. ExPASy Swiss-Prot
Match: PPR13_ARATH (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PDE247 PE=2 SV=1) HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0 Identity = 309/474 (65.19%), Postives = 377/474 (79.54%), Query Frame = 0 Query: 33 IQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPETVAGEL 505
IQ +N +ST TV WTS I+ R+GR+AEAA +F+ MTL G PNHITFI LLSGC DF S LG ++HG CKLGLDRN+VMVGTA++ MY+K GR A +VFD M K+S TWN MI GYMR G +++A +MFD+MP RD ISWTA++NGFVK+GY EEAL FREMQISGV+PDYV II+ LNAC N+G L GLW+HRYVL QDFK+NV+V N+LIDLY RCGC+EFA QVF M KRT+VSWNS+IVGFA NG E+L YF MQ++GFKPD V+FTGALTACSH GL+E+GL+YF IMK Y +SPRIEHYGC+VDLYSRAGRLEDAL +V++MPMKPNEVV+GSLLAAC G +I+LAERLMK+L DL+ SNYV+L+NMYAA GKW+GA K+RR+MKG G++K+PG SSIEI +H FMAGD +H+E+ +I +LEL+S DL+L G V ET+AG+L
Sbjct: 25 IQRHN-QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVETLAGDL 497
BLAST of Cms210580.1 vs. ExPASy Swiss-Prot
Match: PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1) HSP 1 Score: 369.777 bits (948), Expect = 1.717e-121 Identity = 178/448 (39.73%), Postives = 286/448 (63.84%), Query Frame = 0 Query: 43 NPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTN--PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLS 488
NP V +SI R + ++ + L + P+ TF + CA S +LG +HG +CK G R +V+ AL+DMY KF + A VFD M + +WN+++ GY R G ++ A +F M + +SWTA+++G+ G + EA++ FREMQ++G+EPD +++ISVL +CA +G+L +G WIH Y ++ F VCN LI++YS+CG I A Q+F +M + ++SW+++I G+A +G A+E FN MQ+ KP+G++F G L+ACSH G+ ++GL+YFD+M++ Y + P+IEHYGC++D+ +RAG+LE A+ + + MPMKP+ + GSLL++CRT G++ +A M +LV+L+P NYVLLAN+YA +GKW+ ++R+ ++ ++K PG S IE+ + + EF++GD S I +L+L +
Sbjct: 70 NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGS--CYLGKQVHGHLCKFG-PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFT 514 HSP 2 Score: 92.0485 bits (227), Expect = 1.446e-18 Identity = 78/377 (20.69%), Postives = 165/377 (43.77%), Query Frame = 0 Query: 137 ASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFA--------------------------VNGFVG-----EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDAL----------------------------------NVVENMPMKPNEVVLGSLLAACRTKGDIILAER---LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRM 444
AS++ + +SSF M+ + D++ A R+F+++ + + +++ + + + + ++++ E PD T + +CA++G+ +G +H ++ K + +V N LID+Y + + A +VF M++R ++SWNS++ G+A ++G+ G EA+++F MQ G +PD +S L +C+ G +E G ++ + + G + ++++YS+ G + A+ N ++ +KPN + LL+AC G R +M+ ++P ++ +Y L ++ A GK + A +I + M
Sbjct: 31 ASIIIHGL-SQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIE-HYGCLIDVLARAGKLERAVEITKTM 404
BLAST of Cms210580.1 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1) HSP 1 Score: 365.155 bits (936), Expect = 1.837e-118 Identity = 192/503 (38.17%), Postives = 303/503 (60.24%), Query Frame = 0 Query: 7 ATILPQPFLPHQQNPNQNL------TTRPQISIQTNNSKSTVNPTV-QWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV-EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPET 500
A IL L H + P NL + +I T++P + +T++I+ +G +A L + ++ NPN TF +LL C+ G +IH V K GL + V T L+D+YAK G + A VFD M +S + AMI Y ++G++E+A +FD M RD +SW +++G+ + G+ +AL F+++ G +PD +T+++ L+AC+ +G L G WIH +V + NVKVC LID+YS+CG +E A VF ++ +V+WN++I G+A++G+ +AL FN MQ G +P ++F G L AC+HAGL+ +G++ F+ M + YG+ P+IEHYGC+V L RAG+L+ A ++NM M + V+ S+L +C+ GD +L + + +YL+ L+ YVLL+N+YA+VG ++G K+R MK +GI K+PG+S+IEI + +HEF AGDR H +S+ IY++L +S +K GYVP T
Sbjct: 50 AAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS------GKLIHTHVLKFGLGIDP-YVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNT 545
BLAST of Cms210580.1 vs. ExPASy Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1) HSP 1 Score: 352.829 bits (904), Expect = 5.773e-113 Identity = 175/454 (38.55%), Postives = 276/454 (60.79%), Query Frame = 0 Query: 45 TVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK------DNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLK 492
V W S I+ ++G EA F M P+ +T +++S CA + + +G +HG V K RN++++ A +DMYAK R+ A +FD+M +++ +MI GY ++A MF +M R+ +SW AL+ G+ + G EEAL F ++ V P + + ++L ACA++ L +G+ H +VLK FK D++ V N+LID+Y +CGC+E VF++M +R VSWN++I+GFA NG+ EALE F M + G KPD ++ G L+AC HAG +E+G YF M + +GV+P +HY C+VDL RAG LE+A +++E MPM+P+ V+ GSLLAAC+ +I L + + + L++++P YVLL+NMYA +GKW+ +R+ M+ G+ K+PG S I+I H FM D+SH + I+S+L++L +++
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA--IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669 HSP 2 Score: 163.31 bits (412), Expect = 4.218e-42 Identity = 90/299 (30.10%), Postives = 157/299 (52.51%), Query Frame = 0 Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
F LL C +++ +H V K G N + + L+D Y+K G ++ VFD M ++ +TWN+++ G + G ++ A +F MP RD +W ++++GF + EEAL F M G + + SVL+AC+ + + G+ +H + K F +V + + L+D+YS+CG + A +VF M R +VSWNS+I F NG EAL+ F M + +PD V+ ++AC+ I+ G + + K + I VD+Y++ R+++A + ++MP++
Sbjct: 22 FAKLLDSCIKSKLSAIYV-RYVHASVIKSGFS-NEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
BLAST of Cms210580.1 vs. ExPASy Swiss-Prot
Match: PP235_ARATH (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2) HSP 1 Score: 349.747 bits (896), Expect = 6.245e-112 Identity = 170/453 (37.53%), Postives = 272/453 (60.04%), Query Frame = 0 Query: 48 WTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPET 500
W IS + R E+ M + +P +T + +LS C+ + L + CK ++ + AL++ YA G MD+A +F +M + +W +++ GY+ RG+++ A FD+MPVRD ISWT +++G+++ G F E+LE FREMQ +G+ PD T++SVL ACA++G+L IG WI Y+ K K++V V N LID+Y +CGC E A +VF M +R +W +++VG A NG EA++ F MQ +PD +++ G L+AC+H+G+++ ++F M+ + + P + HYGC+VD+ RAG +++A ++ MPM PN +V G+LL A R D +AE K +++L+P + Y LL N+YA +W ++RR++ I+K PG S IE+ HEF+AGD+SH++SE IY LE L+ + Y+P+T
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK---TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDT 653 HSP 2 Score: 125.946 bits (315), Expect = 2.001e-29 Identity = 99/371 (26.68%), Postives = 158/371 (42.59%), Query Frame = 0 Query: 45 TVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFA--------------------------VNGFV-----GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG---LQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
V W + I + E + M G P+ TF LL+G L G +H V K GL +N+ V AL+ MY+ G MD+A VFD + F+WN MI GY R + +EE++E EM+ + V P VT++ VL+AC+ V + +H YV + + ++++ N L++ Y+ CG ++ A ++F+ M R ++SW SI+ G+ ++G++ E+LE F MQ G PD + LTAC+H G +E G Y D K + + ++D+Y + G E A V +M +
Sbjct: 99 VVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR-DGGALACGKKLHCHVVKFGLG-SNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKE-------------------------------YEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNK----IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432 HSP 3 Score: 92.4337 bits (228), Expect = 1.793e-18 Identity = 82/346 (23.70%), Postives = 158/346 (45.66%), Query Frame = 0 Query: 152 WNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA-NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIY------GVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS-NYVLLANMYAAVGKWDGAGKIRRRMKGRG-----------IQKKPGLSSIEIGSGIHEFMAGDRSHIESE 478
W + +GG+ + A ++F ++P D + W ++ G+ K E + + M GV PD T +LN + G L G +H +V+K N+ V N L+ +YS CG ++ A VF R K + SWN +I G+ E++E M++ P V+ L+ACS ++D D+ K+++ P + +V+ Y+ G ++ A+ + +M + + + S++ +G++ LA + D P D ++ ++ + Y G ++ + +I R M+ G + L S+EIG I ++ D++ I+++
Sbjct: 76 WCSRLGGH-----VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK---VKDK----DLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLA----RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI--DKNKIKND 402 HSP 4 Score: 79.7221 bits (195), Expect = 1.997e-14 Identity = 65/253 (25.69%), Postives = 111/253 (43.87%), Query Frame = 0 Query: 42 VNPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC----NTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVG 290
V + WT I + R+G E+ F M G P+ T +++L+ CA S L +G I + K + +N+V+VG AL+DMY K G + A VF M + FTW AM+ G G +EA++ F +MQ ++PD +T + VL+AC + G + ++ K ++ ++D+ R G ++ A ++ ++M ++ NSI+ G
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS--LEIGEWIKTYIDKNKI-KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVG-------------------------------LANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQA---RKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP----MNPNSIVWG 541 HSP 5 Score: 60.8474 bits (146), Expect = 1.885e-8 Identity = 70/296 (23.65%), Postives = 123/296 (41.55%), Query Frame = 0 Query: 196 FEEALECFREMQIS----GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLY-SRCGC-IEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF---------TGALTACS---HAGLIEDGL--------------QYFDIMKKIYGVSPR-----IEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVD--LDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGI 449
F L F+ + +S + DY IS+L C +H + + N L + SR G + +A ++F ++ + +V WN++I G++ GE + + +M KEG PD +F G AC H +++ GL +M GV R + + ++ Y+R E+++ ++ M + P V L +L+AC D L +R+ +Y+ + +P + L+ N YAA G+ D A +I R MK R +
Sbjct: 11 FNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFK---QLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALV-NAYAACGEMDIAVRIFRSMKARDV 302
BLAST of Cms210580.1 vs. ExPASy Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 7.880e-111 Identity = 183/456 (40.13%), Postives = 273/456 (59.87%), Query Frame = 0 Query: 45 TVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK-DNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPE 499
T W I S + L + RM N TF +LL C++ + IH + KLG + N+V +L++ YA G LA ++FD + +WN++I GY++ G ++ A+ +F +M ++AISWT +++G+V+ +EAL+ F EMQ S VEPD V++ + L+ACA +G L G WIH Y+ K + D+V C LID+Y++CG +E A +VF+ + K+++ +W ++I G+A +G EA+ F MQK G KP+ ++FT LTACS+ GL+E+G F M++ Y + P IEHYGCIVDL RAG L++A ++ MP+KPN V+ G+LL ACR +I L E + + L+ +DP YV AN++A KWD A + RR MK +G+ K PG S+I + HEF+AGDRSH E E I S ++ L+ GYVPE
Sbjct: 80 TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA--FEETTQIHAQITKLGYE-NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGC-VLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPE 531 HSP 2 Score: 107.071 bits (266), Expect = 3.183e-23 Identity = 77/287 (26.83%), Postives = 136/287 (47.39%), Query Frame = 0 Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL---ASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEM----PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEH-YGCI-VDLYSRAGRLEDALNVVENMPMK 381
IH + K GL +++ + T L D A +VFD +F WN MI G+ + E ++ ++ M +A ++ +LL FEE + ++ G E D + S++N+ A G + H + D+V N++I Y + G ++ A +F++M ++ +SW ++I G+ EAL+ F+ MQ +PD VS AL+AC+ G +E G + K R++ GC+ +D+Y++ G +E+AL V +N+ K
Sbjct: 33 IHARMLKTGLMQDSYAI-TKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLA---HLLFDRIPEPDDVS-WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNK---TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 311
BLAST of Cms210580.1 vs. ExPASy Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 9.022e-109 Identity = 177/448 (39.51%), Postives = 276/448 (61.61%), Query Frame = 0 Query: 53 SRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPE 499
S + R G EA F M G P+ I+ ++ +S C+ + + G HG V + G + + + AL+DMY K R D A +FD M K+ TWN+++ GY+ G++++A F+ MP ++ +SW +++G V+ FEEA+E F MQ GV D VT++S+ +AC ++G L + WI+ Y+ K + +V++ TL+D++SRCG E A +F + R + +W + I A+ G A+E F+ M ++G KPDGV+F GALTACSH GL++ G + F M K++GVSP HYGC+VDL RAG LE+A+ ++E+MPM+PN+V+ SLLAACR +G++ +A + + L P +YVLL+N+YA+ G+W+ K+R MK +G++K PG SSI+I HEF +GD SH E +I ++L+ +S G+VP+
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN--ILWGKSCHGYVLRNGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPD 754 HSP 2 Score: 143.665 bits (361), Expect = 4.087e-35 Identity = 104/372 (27.96%), Postives = 167/372 (44.89%), Query Frame = 0 Query: 46 VQWTSSISRHCRSGRIAEAALQFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVG-------------------------------EALEYFNSMQ-KEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIY------GVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
V WTS I + R +A F RM PN +T + ++S CA L G ++ + G++ N++MV +AL+DMY K +D+A R+FDE + A+ + +V++G EAL F M SGV PD ++++S +++C+ + + G H YVL+ F+ +CN LID+Y +C + A ++F RM +T+V+WNSI+ G+ NG V EA+E F SMQ +EG DGV+ +AC H G + D+ K IY G+ + +VD++SR G E A+++ ++
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLED--LETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAK-------------------------------RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL-------DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531 HSP 3 Score: 132.109 bits (331), Expect = 2.494e-31 Identity = 97/365 (26.58%), Postives = 170/365 (46.58%), Query Frame = 0 Query: 48 WTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF-REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+ S I + SG EA L F RM G +P+ TF LS CA S+ G IHGL+ K+G YAK DL F N+++ Y G+++SA ++FDEM R+ +SWT+++ G+ +R + ++A++ F R ++ V P+ VT++ V++ACA + L G ++ ++ + N + + L+D+Y +C I+ A ++F L N++ + G EAL FN M G +PD +S A+++CS H ++ +G + +D + ++D+Y + R + A + + M K V S++A G++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA--KSRAKGNGIQIHGLIVKMG---------------YAK----DL-------------FVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI------------CNALIDMYMKCHRQDTAFRIFDRMSNK-TVVTWNSIVAGYVENGEV 419 HSP 4 Score: 60.4622 bits (145), Expect = 2.469e-8 Identity = 59/263 (22.43%), Postives = 105/263 (39.92%), Query Frame = 0 Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE---FACQVFQRMHKR-TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK-----------------------------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKI 440
S L C + L + HR + KQ ++V L+ G E FA +VF+ T +NS+I G+A +G EA+ F M G PD +F L+AC+ + +G+Q ++ K+ G + + +V Y+ G L+ A V + M + PN V + +++AC D+ E++ ++ + G++ N ++ L +MY D A ++
Sbjct: 37 SSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM-GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI--RNSGIEVNDLMVSALVDMYMKCNAIDVAKRL 293
BLAST of Cms210580.1 vs. ExPASy Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 1.341e-108 Identity = 173/450 (38.44%), Postives = 271/450 (60.22%), Query Frame = 0 Query: 65 ALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFT--------------WNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPET 500
L + M+ PN TF ++L CA + + G IHGL K G + V + L+ MY G M A V+F I++ WN MI GYMR GD ++A +FD+M R +SW +++G+ G+F++A+E FREM+ + P+YVT++SVL A + +G+L +G W+H Y + + + + LID+YS+CG IE A VF+R+ + +++W+++I GFA++G G+A++ F M++ G +P V++ LTACSH GL+E+G +YF M + G+ PRIEHYGC+VDL R+G L++A + NMP+KP++V+ +LL ACR +G++ + +R+ L+D+ P YV L+NMYA+ G W ++R RMK + I+K PG S I+I +HEF+ D SH +++ I S+L +S L+L GY P T
Sbjct: 113 TLFYEMMSDEFVEPNRFTFPSVLKACA--KTGKIQEGKQIHGLALKYGFG-GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPIT 559 HSP 2 Score: 108.227 bits (269), Expect = 1.402e-23 Identity = 77/266 (28.95%), Postives = 126/266 (47.37%), Query Frame = 0 Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE--ALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF--------------------KD-------------------------NVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMP 379
D++ A ++F++MP R+ SW ++ GF + + A+ F EM VEP+ T SVL ACA G + G IH LK F KD + + N +ID Y R G + A +F +M +R++VSWN++I G+++NGF +A+E F M+K +P+ V+ L A S G +E G ++ + + G+ RI+ ++D+YS+ G +E A++V E +P
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGI--RIDDVLGSALIDMYSKCGIIEKAIHVFERLP 336 HSP 3 Score: 77.411 bits (189), Expect = 9.000e-14 Identity = 73/299 (24.41%), Postives = 125/299 (41.81%), Query Frame = 0 Query: 45 TVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIM 342
V W + IS + +G +A F M PN++T +++L + S L LG +H G+ ++V+ G+AL+DMY+K G ++ A VF+ + ++ TW+AMI NGF G +A++CF +M+ +GV P V I++L AC++ G + G + + V + ++ ++DL R +G + EA E+ +M KPD V + L AC G +E G + +I+
Sbjct: 239 VVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGS--LELGEWLHLYAEDSGIRIDDVL-GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMI-------------------------------NGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGR-------------------------------SGLLDEAEEFILNMP---IKPDDVIWKALLGACRMQGNVEMGKRVANIL 469
BLAST of Cms210580.1 vs. ExPASy Swiss-Prot
Match: PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E41 PE=3 SV=1) HSP 1 Score: 333.569 bits (854), Expect = 2.534e-107 Identity = 171/452 (37.83%), Postives = 271/452 (59.96%), Query Frame = 0 Query: 43 NPTVQ-WTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKL 493
NP V +T+ I SGR A+ + RM + P++ ++L C L + IH V KLG + VG ++++Y K G + A +FD M + MI Y G I+ A+ +F ++ ++D + WTA+++G V+ +ALE FREMQ+ V + T + VL+AC+++G L +G W+H +V Q + + V N LI++YSRCG I A +VF+ M + ++S+N++I G A++G EA+ F M GF+P+ V+ L ACSH GL++ GL+ F+ MK+++ V P+IEHYGCIVDL R GRLE+A +EN+P++P+ ++LG+LL+AC+ G++ L E++ K L + + YVLL+N+YA+ GKW + +IR M+ GI+K+PG S+IE+ + IHEF+ GD +H E IY L+ L+ L+
Sbjct: 89 NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD------LKVCREIHAQVLKLGFGSSR-SVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRF 533
BLAST of Cms210580.1 vs. ExPASy Swiss-Prot
Match: PPR70_ARATH (Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E57 PE=2 SV=1) HSP 1 Score: 331.257 bits (848), Expect = 2.015e-106 Identity = 179/450 (39.78%), Postives = 263/450 (58.44%), Query Frame = 0 Query: 48 WTSSISRHCRSGRIAEAALQFTRMTLHGT--NPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK-FGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREM-QISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK---EGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILE-LLSF 489
++SS+ H A +A F R+ ++ + PNH + +L S F ++H + K G V+V TALL YA + LA +FD M ++ +W AM+ GY R GDI +AV +F++MP RD SW A+L + G F EA+ FR M + P+ VT++ VL+ACA GTL + IH + ++D +V V N+L+DLY +CG +E A VF+ K++L +WNS+I FA++G EA+ F M K KPD ++F G L AC+H GL+ G YFD+M +G+ PRIEHYGC++DL RAGR ++AL V+ M MK +E + GSLL AC+ G + LAE +K LV L+P ++AN+Y +G W+ A + R+ +K + K PG S IEI + +H+F + D+SH E+E IY IL+ L+SF
Sbjct: 98 YSSSLPLH------ASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSA--FSTPLVHTHLFKSGFHLY-VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLISF 538 HSP 2 Score: 78.1814 bits (191), Expect = 4.779e-14 Identity = 74/288 (25.69%), Postives = 117/288 (40.62%), Query Frame = 0 Query: 46 VQWTSSISRHCRSGRIAEAALQFTRM---------------TLHG-----------------TNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG-----LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMH-KRTLVSWNSIIVGFAVNG 295
V WT+ +S + RSG I+ A F M T +G PN +T + +LS CA + L L IH + L ++V V +L+D+Y K G ++ AS VF KS WN+MI + G E A+ +F+EM ++ I+ ++PD++T I +LNAC + G + G L +R+ + ++ LIDL R G + A +V M K W S++ ++G
Sbjct: 194 VSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQ--TGTLQLAKGIHAFAYRRDLS-SDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEM----------------------------MKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRF----GIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHG 446
BLAST of Cms210580.1 vs. Araport11
Match: | (Symbols: PDE247, CLB19 | pigment defective 247, CHLOROPLAST BIOGENESIS 19 | chr1:1721523-1723025 FORWARD LENGTH=500) HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0 Identity = 309/474 (65.19%), Postives = 377/474 (79.54%), Query Frame = 0 Query: 33 IQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPETVAGEL 505
IQ +N +ST TV WTS I+ R+GR+AEAA +F+ MTL G PNHITFI LLSGC DF S LG ++HG CKLGLDRN+VMVGTA++ MY+K GR A +VFD M K+S TWN MI GYMR G +++A +MFD+MP RD ISWTA++NGFVK+GY EEAL FREMQISGV+PDYV II+ LNAC N+G L GLW+HRYVL QDFK+NV+V N+LIDLY RCGC+EFA QVF M KRT+VSWNS+IVGFA NG E+L YF MQ++GFKPD V+FTGALTACSH GL+E+GL+YF IMK Y +SPRIEHYGC+VDLYSRAGRLEDAL +V++MPMKPNEVV+GSLLAAC G +I+LAERLMK+L DL+ SNYV+L+NMYAA GKW+GA K+RR+MKG G++K+PG SSIEI +H FMAGD +H+E+ +I +LEL+S DL+L G V ET+AG+L
Sbjct: 25 IQRHN-QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVETLAGDL 497
BLAST of Cms210580.1 vs. Araport11
Match: | (Symbols: PDE247, CLB19 | pigment defective 247, CHLOROPLAST BIOGENESIS 19 | chr1:1721523-1723025 FORWARD LENGTH=500) HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0 Identity = 309/474 (65.19%), Postives = 377/474 (79.54%), Query Frame = 0 Query: 33 IQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKG-DIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPETVAGEL 505
IQ +N +ST TV WTS I+ R+GR+AEAA +F+ MTL G PNHITFI LLSGC DF S LG ++HG CKLGLDRN+VMVGTA++ MY+K GR A +VFD M K+S TWN MI GYMR G +++A +MFD+MP RD ISWTA++NGFVK+GY EEAL FREMQISGV+PDYV II+ LNAC N+G L GLW+HRYVL QDFK+NV+V N+LIDLY RCGC+EFA QVF M KRT+VSWNS+IVGFA NG E+L YF MQ++GFKPD V+FTGALTACSH GL+E+GL+YF IMK Y +SPRIEHYGC+VDLYSRAGRLEDAL +V++MPMKPNEVV+GSLLAAC G +I+LAERLMK+L DL+ SNYV+L+NMYAA GKW+GA K+RR+MKG G++K+PG SSIEI +H FMAGD +H+E+ +I +LEL+S DL+L G V ET+AG+L
Sbjct: 25 IQRHN-QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVETLAGDL 497
BLAST of Cms210580.1 vs. Araport11
Match: | (Symbols: MEF21 | mitochondrial editing factor 21 | chr2:8844170-8845764 FORWARD LENGTH=504) HSP 1 Score: 369.392 bits (947), Expect = 8.152e-123 Identity = 172/411 (41.85%), Postives = 274/411 (66.67%), Query Frame = 0 Query: 78 PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLS 488
P+ TF + CA S C +LG +HG +CK G R +V+ AL+DMY KF + A VFD M + +WN+++ GY R G ++ A +F M + +SWTA+++G+ G + EA++ FREMQ++G+EPD +++ISVL +CA +G+L +G WIH Y ++ F VCN LI++YS+CG I A Q+F +M + ++SW+++I G+A +G A+E FN MQ+ KP+G++F G L+ACSH G+ ++GL+YFD+M++ Y + P+IEHYGC++D+ +RAG+LE A+ + + MPMKP+ + GSLL++CRT G++ +A M +LV+L+P NYVLLAN+YA +GKW+ ++R+ ++ ++K PG S IE+ + + EF++GD S I +L+L +
Sbjct: 77 PDRFTFPFMFKSCASLGS-C-YLGKQVHGHLCKFG-PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFT 484
BLAST of Cms210580.1 vs. Araport11
Match: | (Symbols: MEF21 | mitochondrial editing factor 21 | chr2:8844160-8845764 FORWARD LENGTH=534) HSP 1 Score: 369.777 bits (948), Expect = 1.795e-122 Identity = 178/448 (39.73%), Postives = 286/448 (63.84%), Query Frame = 0 Query: 43 NPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTN--PNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLS 488
NP V +SI R + ++ + L + P+ TF + CA S +LG +HG +CK G R +V+ AL+DMY KF + A VFD M + +WN+++ GY R G ++ A +F M + +SWTA+++G+ G + EA++ FREMQ++G+EPD +++ISVL +CA +G+L +G WIH Y ++ F VCN LI++YS+CG I A Q+F +M + ++SW+++I G+A +G A+E FN MQ+ KP+G++F G L+ACSH G+ ++GL+YFD+M++ Y + P+IEHYGC++D+ +RAG+LE A+ + + MPMKP+ + GSLL++CRT G++ +A M +LV+L+P NYVLLAN+YA +GKW+ ++R+ ++ ++K PG S IE+ + + EF++GD S I +L+L +
Sbjct: 70 NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGS--CYLGKQVHGHLCKFG-PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFT 514 HSP 2 Score: 92.0485 bits (227), Expect = 1.471e-19 Identity = 78/377 (20.69%), Postives = 165/377 (43.77%), Query Frame = 0 Query: 137 ASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVE-PDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFA--------------------------VNGFVG-----EALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDAL----------------------------------NVVENMPMKPNEVVLGSLLAACRTKGDIILAER---LMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRM 444
AS++ + +SSF M+ + D++ A R+F+++ + + +++ + + + + ++++ E PD T + +CA++G+ +G +H ++ K + +V N LID+Y + + A +VF M++R ++SWNS++ G+A ++G+ G EA+++F MQ G +PD +S L +C+ G +E G ++ + + G + ++++YS+ G + A+ N ++ +KPN + LL+AC G R +M+ ++P ++ +Y L ++ A GK + A +I + M
Sbjct: 31 ASIIIHGL-SQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIE-HYGCLIDVLARAGKLERAVEITKTM 404
BLAST of Cms210580.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:17572040-17573938 REVERSE LENGTH=632) HSP 1 Score: 365.155 bits (936), Expect = 1.915e-119 Identity = 192/503 (38.17%), Postives = 303/503 (60.24%), Query Frame = 0 Query: 7 ATILPQPFLPHQQNPNQNL------TTRPQISIQTNNSKSTVNPTV-QWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGV-EPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQK-EGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPET 500
A IL L H + P NL + +I T++P + +T++I+ +G +A L + ++ NPN TF +LL C+ G +IH V K GL + V T L+D+YAK G + A VFD M +S + AMI Y ++G++E+A +FD M RD +SW +++G+ + G+ +AL F+++ G +PD +T+++ L+AC+ +G L G WIH +V + NVKVC LID+YS+CG +E A VF ++ +V+WN++I G+A++G+ +AL FN MQ G +P ++F G L AC+HAGL+ +G++ F+ M + YG+ P+IEHYGC+V L RAG+L+ A ++NM M + V+ S+L +C+ GD +L + + +YL+ L+ YVLL+N+YA+VG ++G K+R MK +GI K+PG+S+IEI + +HEF AGDR H +S+ IY++L +S +K GYVP T
Sbjct: 50 AAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS------GKLIHTHVLKFGLGIDP-YVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNT 545
BLAST of Cms210580.1 vs. Araport11
Match: | (Symbols: SLO2 | SLOW GROWTH 2 | chr2:5671493-5673586 FORWARD LENGTH=697) HSP 1 Score: 352.829 bits (904), Expect = 6.008e-114 Identity = 175/454 (38.55%), Postives = 276/454 (60.79%), Query Frame = 0 Query: 45 TVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK------DNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLK 492
V W S I+ ++G EA F M P+ +T +++S CA + + +G +HG V K RN++++ A +DMYAK R+ A +FD+M +++ +MI GY ++A MF +M R+ +SW AL+ G+ + G EEAL F ++ V P + + ++L ACA++ L +G+ H +VLK FK D++ V N+LID+Y +CGC+E VF++M +R VSWN++I+GFA NG+ EALE F M + G KPD ++ G L+AC HAG +E+G YF M + +GV+P +HY C+VDL RAG LE+A +++E MPM+P+ V+ GSLLAAC+ +I L + + + L++++P YVLL+NMYA +GKW+ +R+ M+ G+ K+PG S I+I H FM D+SH + I+S+L++L +++
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA--IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669 HSP 2 Score: 163.31 bits (412), Expect = 4.310e-43 Identity = 90/299 (30.10%), Postives = 157/299 (52.51%), Query Frame = 0 Query: 83 FITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
F LL C +++ +H V K G N + + L+D Y+K G ++ VFD M ++ +TWN+++ G + G ++ A +F MP RD +W ++++GF + EEAL F M G + + SVL+AC+ + + G+ +H + K F +V + + L+D+YS+CG + A +VF M R +VSWNS+I F NG EAL+ F M + +PD V+ ++AC+ I+ G + + K + I VD+Y++ R+++A + ++MP++
Sbjct: 22 FAKLLDSCIKSKLSAIYV-RYVHASVIKSGFS-NEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
BLAST of Cms210580.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:5387444-5389690 FORWARD LENGTH=687) HSP 1 Score: 349.747 bits (896), Expect = 6.500e-113 Identity = 170/453 (37.53%), Postives = 272/453 (60.04%), Query Frame = 0 Query: 48 WTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPET 500
W IS + R E+ M + +P +T + +LS C+ + L + CK ++ + AL++ YA G MD+A +F +M + +W +++ GY+ RG+++ A FD+MPVRD ISWT +++G+++ G F E+LE FREMQ +G+ PD T++SVL ACA++G+L IG WI Y+ K K++V V N LID+Y +CGC E A +VF M +R +W +++VG A NG EA++ F MQ +PD +++ G L+AC+H+G+++ ++F M+ + + P + HYGC+VD+ RAG +++A ++ MPM PN +V G+LL A R D +AE K +++L+P + Y LL N+YA +W ++RR++ I+K PG S IE+ HEF+AGD+SH++SE IY LE L+ + Y+P+T
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK---TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDT 653 HSP 2 Score: 125.946 bits (315), Expect = 2.035e-30 Identity = 99/371 (26.68%), Postives = 158/371 (42.59%), Query Frame = 0 Query: 45 TVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFA--------------------------VNGFV-----GEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDG---LQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK 381
V W + I + E + M G P+ TF LL+G L G +H V K GL +N+ V AL+ MY+ G MD+A VFD + F+WN MI GY R + +EE++E EM+ + V P VT++ VL+AC+ V + +H YV + + ++++ N L++ Y+ CG ++ A ++F+ M R ++SW SI+ G+ ++G++ E+LE F MQ G PD + LTAC+H G +E G Y D K + + ++D+Y + G E A V +M +
Sbjct: 99 VVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR-DGGALACGKKLHCHVVKFGLG-SNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKE-------------------------------YEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNK----IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432 HSP 3 Score: 92.4337 bits (228), Expect = 1.820e-19 Identity = 82/346 (23.70%), Postives = 158/346 (45.66%), Query Frame = 0 Query: 152 WNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACA-NVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIY------GVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDS-NYVLLANMYAAVGKWDGAGKIRRRMKGRG-----------IQKKPGLSSIEIGSGIHEFMAGDRSHIESE 478
W + +GG+ + A ++F ++P D + W ++ G+ K E + + M GV PD T +LN + G L G +H +V+K N+ V N L+ +YS CG ++ A VF R K + SWN +I G+ E++E M++ P V+ L+ACS ++D D+ K+++ P + +V+ Y+ G ++ A+ + +M + + + S++ +G++ LA + D P D ++ ++ + Y G ++ + +I R M+ G + L S+EIG I ++ D++ I+++
Sbjct: 76 WCSRLGGH-----VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK---VKDK----DLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLA----RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI--DKNKIKND 402 HSP 4 Score: 79.7221 bits (195), Expect = 2.027e-15 Identity = 65/253 (25.69%), Postives = 111/253 (43.87%), Query Frame = 0 Query: 42 VNPTVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVC----NTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVG 290
V + WT I + R+G E+ F M G P+ T +++L+ CA S L +G I + K + +N+V+VG AL+DMY K G + A VF M + FTW AM+ G G +EA++ F +MQ ++PD +T + VL+AC + G + ++ K ++ ++D+ R G ++ A ++ ++M ++ NSI+ G
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS--LEIGEWIKTYIDKNKI-KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVG-------------------------------LANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQA---RKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP----MNPNSIVWG 541 HSP 5 Score: 60.8474 bits (146), Expect = 1.913e-9 Identity = 70/296 (23.65%), Postives = 123/296 (41.55%), Query Frame = 0 Query: 196 FEEALECFREMQIS----GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLY-SRCGC-IEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSF---------TGALTACS---HAGLIEDGL--------------QYFDIMKKIYGVSPR-----IEHYGCIVDLYSRAGRLEDALNVVENMP---MKPNEVVLGSLLAACRTKGDIILAERLMKYLVD--LDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGI 449
F L F+ + +S + DY IS+L C +H + + N L + SR G + +A ++F ++ + +V WN++I G++ GE + + +M KEG PD +F G AC H +++ GL +M GV R + + ++ Y+R E+++ ++ M + P V L +L+AC D L +R+ +Y+ + +P + L+ N YAA G+ D A +I R MK R +
Sbjct: 11 FNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFK---QLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALV-NAYAACGEMDIAVRIFRSMKARDV 302
BLAST of Cms210580.1 vs. Araport11
Match: | (Symbols: CREF7 | Chloroplast RNA Editing Factor 7 | chr5:26551879-26553741 FORWARD LENGTH=620) HSP 1 Score: 345.125 bits (884), Expect = 8.213e-112 Identity = 183/456 (40.13%), Postives = 273/456 (59.87%), Query Frame = 0 Query: 45 TVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFK-DNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPE 499
T W I S + L + RM N TF +LL C++ + IH + KLG + N+V +L++ YA G LA ++FD + +WN++I GY++ G ++ A+ +F +M ++AISWT +++G+V+ +EAL+ F EMQ S VEPD V++ + L+ACA +G L G WIH Y+ K + D+V C LID+Y++CG +E A +VF+ + K+++ +W ++I G+A +G EA+ F MQK G KP+ ++FT LTACS+ GL+E+G F M++ Y + P IEHYGCIVDL RAG L++A ++ MP+KPN V+ G+LL ACR +I L E + + L+ +DP YV AN++A KWD A + RR MK +G+ K PG S+I + HEF+AGDRSH E E I S ++ L+ GYVPE
Sbjct: 80 TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA--FEETTQIHAQITKLGYE-NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGC-VLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPE 531 HSP 2 Score: 107.071 bits (266), Expect = 3.236e-24 Identity = 77/287 (26.83%), Postives = 136/287 (47.39%), Query Frame = 0 Query: 104 IHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDL---ASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEM----PVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEH-YGCI-VDLYSRAGRLEDALNVVENMPMK 381
IH + K GL +++ + T L D A +VFD +F WN MI G+ + E ++ ++ M +A ++ +LL FEE + ++ G E D + S++N+ A G + H + D+V N++I Y + G ++ A +F++M ++ +SW ++I G+ EAL+ F+ MQ +PD VS AL+AC+ G +E G + K R++ GC+ +D+Y++ G +E+AL V +N+ K
Sbjct: 33 IHARMLKTGLMQDSYAI-TKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLA---HLLFDRIPEPDDVS-WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNK---TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 311
BLAST of Cms210580.1 vs. Araport11
Match: | (Symbols: YS1 | YELLOW SEEDLING1 | chr3:8022006-8024534 REVERSE LENGTH=842) HSP 1 Score: 345.895 bits (886), Expect = 9.352e-110 Identity = 177/448 (39.51%), Postives = 276/448 (61.61%), Query Frame = 0 Query: 53 SRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQIS-GVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPE 499
S + R G EA F M G P+ I+ ++ +S C+ + + G HG V + G + + + AL+DMY K R D A +FD M K+ TWN+++ GY+ G++++A F+ MP ++ +SW +++G V+ FEEA+E F MQ GV D VT++S+ +AC ++G L + WI+ Y+ K + +V++ TL+D++SRCG E A +F + R + +W + I A+ G A+E F+ M ++G KPDGV+F GALTACSH GL++ G + F M K++GVSP HYGC+VDL RAG LE+A+ ++E+MPM+PN+V+ SLLAACR +G++ +A + + L P +YVLL+N+YA+ G+W+ K+R MK +G++K PG SSI+I HEF +GD SH E +I ++L+ +S G+VP+
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN--ILWGKSCHGYVLRNGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPD 754 HSP 2 Score: 143.665 bits (361), Expect = 4.151e-36 Identity = 104/372 (27.96%), Postives = 167/372 (44.89%), Query Frame = 0 Query: 46 VQWTSSISRHCRSGRIAEAALQFTRMTL-HGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVG-------------------------------EALEYFNSMQ-KEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIY------GVSPRIEHYGCIVDLYSRAGRLEDALNVVENM 378
V WTS I + R +A F RM PN +T + ++S CA L G ++ + G++ N++MV +AL+DMY K +D+A R+FDE + A+ + +V++G EAL F M SGV PD ++++S +++C+ + + G H YVL+ F+ +CN LID+Y +C + A ++F RM +T+V+WNSI+ G+ NG V EA+E F SMQ +EG DGV+ +AC H G + D+ K IY G+ + +VD++SR G E A+++ ++
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLED--LETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAK-------------------------------RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL-------DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531 HSP 3 Score: 132.109 bits (331), Expect = 2.532e-32 Identity = 97/365 (26.58%), Postives = 170/365 (46.58%), Query Frame = 0 Query: 48 WTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECF-REMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACS-----------HAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDI 400
+ S I + SG EA L F RM G +P+ TF LS CA S+ G IHGL+ K+G YAK DL F N+++ Y G+++SA ++FDEM R+ +SWT+++ G+ +R + ++A++ F R ++ V P+ VT++ V++ACA + L G ++ ++ + N + + L+D+Y +C I+ A ++F L N++ + G EAL FN M G +PD +S A+++CS H ++ +G + +D + ++D+Y + R + A + + M K V S++A G++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA--KSRAKGNGIQIHGLIVKMG---------------YAK----DL-------------FVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI------------CNALIDMYMKCHRQDTAFRIFDRMSNK-TVVTWNSIVAGYVENGEV 419 HSP 4 Score: 60.4622 bits (145), Expect = 2.504e-9 Identity = 59/263 (22.43%), Postives = 105/263 (39.92%), Query Frame = 0 Query: 220 SVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIE---FACQVFQRMHKR-TLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMK-----------------------------------PNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVL---LANMYAAVGKWDGAGKI 440
S L C + L + HR + KQ ++V L+ G E FA +VF+ T +NS+I G+A +G EA+ F M G PD +F L+AC+ + +G+Q ++ K+ G + + +V Y+ G L+ A V + M + PN V + +++AC D+ E++ ++ + G++ N ++ L +MY D A ++
Sbjct: 37 SSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM-GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI--RNSGIEVNDLMVSALVDMYMKCNAIDVAKRL 293
BLAST of Cms210580.1 vs. Araport11
Match: | (Symbols: LPA66 | LOW PSII ACCUMULATION 66 | chr5:19832969-19834909 REVERSE LENGTH=646) HSP 1 Score: 340.117 bits (871), Expect = 1.396e-109 Identity = 173/450 (38.44%), Postives = 271/450 (60.22%), Query Frame = 0 Query: 65 ALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFT--------------WNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHYGCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAAVGKWDGAGKIRRRMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSILELLSFDLKLCGYVPET 500
L + M+ PN TF ++L CA + + G IHGL K G + V + L+ MY G M A V+F I++ WN MI GYMR GD ++A +FD+M R +SW +++G+ G+F++A+E FREM+ + P+YVT++SVL A + +G+L +G W+H Y + + + + LID+YS+CG IE A VF+R+ + +++W+++I GFA++G G+A++ F M++ G +P V++ LTACSH GL+E+G +YF M + G+ PRIEHYGC+VDL R+G L++A + NMP+KP++V+ +LL ACR +G++ + +R+ L+D+ P YV L+NMYA+ G W ++R RMK + I+K PG S I+I +HEF+ D SH +++ I S+L +S L+L GY P T
Sbjct: 113 TLFYEMMSDEFVEPNRFTFPSVLKACA--KTGKIQEGKQIHGLALKYGFG-GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPIT 559 HSP 2 Score: 108.227 bits (269), Expect = 1.424e-24 Identity = 77/266 (28.95%), Postives = 126/266 (47.37%), Query Frame = 0 Query: 164 DIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEE--ALECFREMQISG-VEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDF--------------------KD-------------------------NVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIMKKIYGVSPRIEHY--GCIVDLYSRAGRLEDALNVVENMP 379
D++ A ++F++MP R+ SW ++ GF + + A+ F EM VEP+ T SVL ACA G + G IH LK F KD + + N +ID Y R G + A +F +M +R++VSWN++I G+++NGF +A+E F M+K +P+ V+ L A S G +E G ++ + + G+ RI+ ++D+YS+ G +E A++V E +P
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGI--RIDDVLGSALIDMYSKCGIIEKAIHVFERLP 336 HSP 3 Score: 77.411 bits (189), Expect = 9.138e-15 Identity = 73/299 (24.41%), Postives = 125/299 (41.81%), Query Frame = 0 Query: 45 TVQWTSSISRHCRSGRIAEAALQFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLASVVFDAMIVKSSFTWNAMIGGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIG-LWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFACQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLQYFDIM 342
V W + IS + +G +A F M PN++T +++L + S L LG +H G+ ++V+ G+AL+DMY+K G ++ A VF+ + ++ TW+AMI NGF G +A++CF +M+ +GV P V I++L AC++ G + G + + V + ++ ++DL R +G + EA E+ +M KPD V + L AC G +E G + +I+
Sbjct: 239 VVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGS--LELGEWLHLYAEDSGIRIDDVL-GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMI-------------------------------NGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGR-------------------------------SGLLDEAEEFILNMP---IKPDDVIWKALLGACRMQGNVEMGKRVANIL 469 The following BLAST results are available for this feature:
BLAST of Cms210580.1 vs. ExPASy TrEMBL
Analysis Date: 2024-02-02 (Blastp of Citrus mangshanensis cv. MSYG v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Cms210580.1 vs. ExPASy Swiss-Prot
Analysis Date: 2024-02-02 (Blastp of Citrus mangshanensis cv. MSYG v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Cms210580.1 vs. Araport11
Analysis Date: 2024-02-02 (Blastp of Citrus mangshanensis cv. MSYG v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus mangshanensis cv. MSYG v1.0 proteins
Date Performed: 2024-02-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Cms210580.1-MSYG_v1 ID=Cms210580.1-MSYG_v1; Name=Cms210580.1; organism=Citrus mangshanensis; type=mRNA; length=1530bpback to top protein sequence of Cms210580.1-MSYG_v1 >Cms210580.1-MSYG_v1 ID=Cms210580.1-MSYG_v1; Name=Cms210580.1-MSYG_v1; organism=Citrus mangshanensis; type=polypeptide; length=510bpback to top mRNA from alignment at contig175:2198214..2200033+ Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1820bp; location=Sequence derived from: contig175:2198214..2200033+ (Citrus mangshanensisback to top Coding sequence (CDS) from alignment at contig175:2198214..2200033+ >Cms210580.1-MSYG_v1 ID=Cms210580.1-MSYG_v1; Name=Cms210580.1; organism=Citrus mangshanensis; type=CDS; length=1530bp; location=Sequence derived from: contig175:2198214..2200033+ (Citrus mangshanensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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