Cms210590.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cms210590.1 vs. ExPASy TrEMBL
Match: A0A067ET48|A0A067ET48_CITSI (Pentacotripeptide-repeat region of PRORP domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g036263mg PE=4 SV=1) HSP 1 Score: 406.371 bits (1043), Expect = 4.215e-141 Identity = 213/305 (69.84%), Postives = 216/305 (70.82%), Query Frame = 0 Query: 1 MNSPAIATILRQPFLPHQQNPNQNLKKRPQISIQTNNRKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPSNNVMVGTALLDMYAKFGRMDLATVVFDVMR----------------------------------------VKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLT----------GC--------------------------------GEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCI 223 MNSPAIATILRQPFLPHQQN NQNLKKRPQISIQTNN KSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPS ITFVTLLSGCADFPSNNVMV TALLDMYAKFGRMDLATVVFDVMR + +LNVCANVRTLGIGLWMHRYVPKQDFKDNVR+ GC GEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYF IMKKIYRVSPQIEHHGCI Sbjct: 1 MNSPAIATILRQPFLPHQQNRNQNLKKRPQISIQTNNSKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
BLAST of Cms210590.1 vs. ExPASy TrEMBL
Match: A0A067F459|A0A067F459_CITSI (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g010496mg PE=4 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 2.503e-95 Identity = 178/361 (49.31%), Postives = 195/361 (54.02%), Query Frame = 0 Query: 1 MNSPAIATILRQPFLPHQQNPNQNLKKRPQISIQTNNRKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPS--------------------NNVMVGTALL-------------------------------DMYAKFGRMDLATVVFDVMRVK------------------------------------------ILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLT----------GC--------------------------------GEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 MNS A ATIL QPFLPHQQNPNQNL PQISIQTNN KST++ TVQWTSSISRHCRSG I EAALEFTRM L+GTNP+ ITF+TLLSGCADFPS NNVMVGTALL D Y + G ++ A +FD M V+ +LN CANV TLGIGLW+HRYV KQDFKDNV++ GC GEALEYFN MQK FK D VSFTGALTACSHAGLIEDGL+YF IMKKIYRVSP+IEH+GCIVDL Sbjct: 1 MNSSATATILPQPFLPHQQNPNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGFVKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNVKVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDL 361
BLAST of Cms210590.1 vs. ExPASy TrEMBL
Match: A0A2H5QDR5|A0A2H5QDR5_CITUN (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_220490 PE=4 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 4.491e-95 Identity = 177/361 (49.03%), Postives = 195/361 (54.02%), Query Frame = 0 Query: 1 MNSPAIATILRQPFLPHQQNPNQNLKKRPQISIQTNNRKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPS--------------------NNVMVGTALL-------------------------------DMYAKFGRMDLATVVFDVMRVK------------------------------------------ILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLT----------GC--------------------------------GEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 MNS A ATIL QPFLPHQQNPNQNL PQISIQTNNRKST++ TVQWTSSISRHCRSG I EAALEFTRM L+GTNP+ ITF+TLLSGCADFPS NNVMVGTALL D Y + G ++ A +FD M V+ +LN CANV LGIGLW+HR+V KQDFKDNVR+ GC GEALEYFN MQK FK D VSFTGALTACSHAGLIEDG++YF IMKKIYRVSP+IEH+GCIVDL Sbjct: 1 MNSSATATILPQPFLPHQQNPNQNLTTTPQISIQTNNRKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAKFGRMDLATVVFDAMRVKSSFTWNAMIDGYMRSGDIESAVKMFDEMPVRNAISWTALLNGFAKRGYFEEALECFREMQISGVEPDYVTIVSVLNACANVGMLGIGLWIHRFVLKQDFKDNVRVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGVRYFDIMKKIYRVSPRIEHYGCIVDL 361
BLAST of Cms210590.1 vs. ExPASy TrEMBL
Match: A0A2H5QDQ5|A0A2H5QDQ5_CITUN (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_220480 PE=4 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 3.213e-70 Identity = 123/197 (62.44%), Postives = 125/197 (63.45%), Query Frame = 0 Query: 99 MVGTALLDMYAKFGRMDLATVVFDVMRVK---------------------------ILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLT----------GC--------------------------------GEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 MVGTALLDMYAKFGRMDLATVVFDVM VK +LNVCANVRTLGIGLWMHRYVPKQDFKDNVR+ GC GEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYF IMKKIYRVSPQIEHHGCIVDL Sbjct: 1 MVGTALLDMYAKFGRMDLATVVFDVMTVKNYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCIVDL 197
BLAST of Cms210590.1 vs. ExPASy TrEMBL
Match: A0A1Q3D4I1|A0A1Q3D4I1_CEPFO (PPR domain-containing protein/PPR_1 domain-containing protein/PPR_2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_30795 PE=4 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.159e-56 Identity = 125/345 (36.23%), Postives = 163/345 (47.25%), Query Frame = 0 Query: 17 HQQNPNQNLKKRPQISIQTNNRKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFP--------------------SNNVMVGTALLDMYA-------------------------------KFGRMDLATVVFDVMRVK------------------------------------------ILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTG--------CG----------------------------------EALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 HQ P + +R +S +TN +D V WTSSISR C+SG + EAA EFTRMRL G P+ ITF+TLLSGCADFP +NVMVGTA++ MY ++G +D A +FD M V+ +L+ CAN+ LG+G W+HR+V +QDFK+NVR++ CG EALEYF+LMQK K D VSFTGALTACSH GL+++GL+YF IMK++YR+SP+IEH+GC+VDL Sbjct: 32 HQTKPTK--YQRISLSTKTN----PVDVIVSWTSSISRRCQSGQLPEAAAEFTRMRLSGVTPNHITFITLLSGCADFPLESEFFGALLHGYVRKLGLVGDNVMVGTAVIGMYVKFGRIGLARLVFDAMEVKNSVSWNTMIDGYMRYGEVDDAIKLFDEMPVRDKISWTALINGFVKNGRFEQALECFSEMLISEVEPDYVTMIAVLSACANLGALGLGCWIHRFVLEQDFKNNVRVSNSLVDMYARCGCVDFARQVFEKMPKRTLVSWNSIMVGFAANGLAEEALEYFDLMQKYELKPDGVSFTGALTACSHTGLVDEGLRYFNIMKRVYRISPRIEHYGCVVDL 370
BLAST of Cms210590.1 vs. ExPASy TrEMBL
Match: A0A314KLW4|A0A314KLW4_NICAT (Pentatricopeptide repeat-containing protein, chloroplastic OS=Nicotiana attenuata OX=49451 GN=PDE247 PE=4 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 1.006e-55 Identity = 114/312 (36.54%), Postives = 155/312 (49.68%), Query Frame = 0 Query: 27 KRPQISIQTNNRKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPSN--------------------NVMVGTALLDMYAKFGRMDLATVVFDVM-----------------------RVKILN---------------------------VCANVRTLGIGLWMHRYVPKQDFKDNVRLT----------GCGE--------------------------------ALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 +R + + N + +D+T WTS I+ HCR+G ++EA EFT MR+ G P+ +TFVTLLSGCA FP+ NV VGTA++DMY+KFG ++LA + FD M VK+ + CAN+ TLGI LW HR++ ++ FK+NVR+ GC E AL+YFNLMQK FK D V+FTG LTACSHAG++E+GL+YF MK+++R+SP+IEH+GCIVDL Sbjct: 36 RRSKFQLALKNLSNNLDSTASWTSLIANHCRNGRLIEAVSEFTLMRISGFEPNHVTFVTLLSGCAHFPAQALSLGSALHAYARKLGLDTQNVKVGTAIIDMYSKFGLLELARLSFDHMDVKNKVTWNTMVDGFMRNGDFKNAVKMFDEIPERDVISWTALIGGFVKNGLFEESSTCANLGTLGISLWSHRFILQRAFKNNVRVNNTLIDMYCRCGCVELACQVFDKMPERSLVSWNSIIVGLAVNGHAMDALQYFNLMQKERFKPDAVTFTGVLTACSHAGMVEEGLKYFKAMKRVHRISPRIEHYGCIVDL 347
BLAST of Cms210590.1 vs. ExPASy TrEMBL
Match: A0A2C9V980|A0A2C9V980_MANES (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_09G091500 PE=4 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.813e-55 Identity = 126/343 (36.73%), Postives = 163/343 (47.52%), Query Frame = 0 Query: 19 QNPNQNLKKRPQISIQTNNRKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPSN--------------------NVMVGTA-------------------------------LLDMYAKFGRMDLATVVFDVMR------------------------------------------VKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTG--------CG----------------------------------EALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 QNP N +P ++ + KS ID TV WT+SISRHCR+G + EAA +FT+M L G P+ ITF TLLSGCADFPS+ NVMVGTA ++D Y + G ++ A +FD M + +L+ CAN+ LG+GLW+HRYV KQ+F+DN+R++ CG EALEYF LMQK FK D VSFTGALTACSHAGL++ GL+YF +MKK+Y++SP+IEH+GCIVDL Sbjct: 61 QNP-VNPTSKPNFPLKQQSDKS-IDLTVAWTNSISRHCRNGQLPEAASQFTQMLLAGVEPNHITFTTLLSGCADFPSHGKSLGPLIHSYVRKRGFDTRNVMVGTAVVDMYAKCGQVELARLCFDELKIKNSVSWNTMMDGYMRNGEIEDAIELFDEMPERDAISWTVFIDGFVKKGLFEQGLEWFREMQVSMMEPDYVTIIAVLSACANLGALGLGLWIHRYVLKQEFRDNIRISNSLIVMYSRCGCIEIARQVFHKMLKRTLVSWNSIIVGFATNGFAEEALEYFVLMQKEGFKPDGVSFTGALTACSHAGLVDKGLKYFDVMKKVYKLSPRIEHYGCIVDL 401
BLAST of Cms210590.1 vs. ExPASy TrEMBL
Match: A0A8J4R7T2|A0A8J4R7T2_9ROSI (Chloroplast biogenesis 19 OS=Castanea mollissima OX=60419 GN=CMV_016573 PE=4 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 3.405e-55 Identity = 123/341 (36.07%), Postives = 164/341 (48.09%), Query Frame = 0 Query: 21 PNQNLKKRPQISIQTNNRKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFP--------------------SNNVMVGTA-------------------------------LLDMYAKFGRMDLATVVFDVM----------------------------------RVK--------ILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTG--------CG----------------------------------EALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 P+ R ++S+ NR TID V WTSSI+RHCR+ + EAA EF RMRL G P+ +TF+TLLS CADFP SNNVMVGTA ++D Y + G+++ A +FD M RVK +L+ CAN+ TLG+GLWM+R+V KQDFKDN+R++ CG EALE+F LMQK FK D +SFTGALTACSHAGL+++GL++F MK+++R++P+IEH+GC+VDL Sbjct: 30 PSSLPNHRHRVSLPQTNRP-TIDPVVSWTSSIARHCRNAQLPEAAAEFQRMRLAGVEPNHVTFITLLSACADFPLESVAFGSSIHAYVRKFGLLSNNVMVGTALLDMYAKCRHVDLARTVFDEMGVKNSVSWNTMIDGYMRNGKVEDAIRLFDEMPERDAISWTALIGGFVKKDHFEQALLWFQEMQLARVKPDYVTIIAVLSACANLGTLGLGLWMNRFVLKQDFKDNIRISNSLIDMYSRCGCIEFARQIFEKMTKRTLVSWNSIIVGFAVNGHVEEALEFFGLMQKEGFKPDGISFTGALTACSHAGLVDEGLKFFDEMKRVHRITPRIEHYGCMVDL 369
BLAST of Cms210590.1 vs. ExPASy TrEMBL
Match: V4UDI3|V4UDI3_CITCL (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10030188mg PE=4 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 6.003e-55 Identity = 95/143 (66.43%), Postives = 98/143 (68.53%), Query Frame = 0 Query: 126 VKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLT----------GC--------------------------------GEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 + +LNVCANVRTLGIGLWMHRYVPKQDFKDNVR+ GC GEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYF IMKKIYRVSPQIEHHGCIVDL Sbjct: 44 ISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCIVDL 186
BLAST of Cms210590.1 vs. ExPASy TrEMBL
Match: A0A5J5BQE5|A0A5J5BQE5_9ASTE (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_022392 PE=4 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.133e-55 Identity = 129/376 (34.31%), Postives = 173/376 (46.01%), Query Frame = 0 Query: 1 MNSPAIATILRQ----PFLPHQQNPNQNLKKRPQISIQTN-----------NRKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPS--------------------NNVMVGTA-------------------------------LLDMYAKFGRMDLATVVFDVM----------------------------------RVK--------ILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTG--------CG----------------------------------EALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 M+ PA T Q P L N NQ P +S +N N KS +D T+ WTSSI++HCR+G + EA EF+RMR+ G P+ ITFVTLLSGCADFPS NNV VGTA ++D Y K G+++ A +FD M RVK +++ CA++ LG+GLW++R+V Q+ KDN+R+ CG EAL++FN+MQK F+ D VSFTGALTACSHAGL+++GL++F IMK+++R+SPQIEH+GCIVDL Sbjct: 1 MSLPAFTTATTQTLCLPSLYTNPNTNQPTFPNPNLSFNSNTAKHHVSPRQTNNKSIVDPTISWTSSIAQHCRNGHLAEAGTEFSRMRIAGVEPNHITFVTLLSGCADFPSQTFCFGASIHAYVRKLGLDTNNVKVGTAVVDMYSKCGHVDLARLCFDEICVKNKVSWNTMIDGYMKNGKVENAIELFDQMPERDAISWTALIGGFIKKGHFEQALECFQEMQLSRVKPDYVTIIAVVSACAHLGALGLGLWINRFVLNQELKDNIRVNNSLIDMYSRCGCIDFACQIFENMPKRSLVSWNSIIVGFAMNGHAEEALQFFNMMQKEGFEPDGVSFTGALTACSHAGLVDEGLKFFNIMKRVHRISPQIEHYGCIVDL 376
BLAST of Cms210590.1 vs. ExPASy Swiss-Prot
Match: PPR13_ARATH (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PDE247 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.227e-45 Identity = 113/356 (31.74%), Postives = 150/356 (42.13%), Query Frame = 0 Query: 6 IATILRQPFLPHQQNPNQNLKKRPQISIQTNNRKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPS--------------------NNVMVGTA-------------------------------LLDMYAKFGRMDLATVVFDVMR------------------------------------------VKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTG--------CG----------------------------------EALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 + I + H+ + N +++ Q ST +TTV WTS I+ R+G + EAA EF+ M L G P+ ITF+ LLSGC DF S N+VMVGTA ++D Y + G++D A +FD M + LN C N+ L GLW+HRYV QDFK+NVR++ CG E+L YF MQ+ FK D V+FTGALTACSH GL+E+GL+YF IMK YR+SP+IEH+GC+VDL Sbjct: 6 VVGITSPALITHKNHANPKIQRHNQ---------STSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDL 352
BLAST of Cms210590.1 vs. ExPASy Swiss-Prot
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 1.331e-24 Identity = 64/199 (32.16%), Postives = 102/199 (51.26%), Query Frame = 0 Query: 45 TVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPS-----------------NNVMVGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTGCGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 V WTS I+ ++G +EA F M++ G P+ +T ++L C + + +NV VG+AL+DMYAK GR++L+ +VF++M K L VC N +L G MH E + F + + K D +SFT L+AC GL ++G +YF +M + Y + P++EH+ C+V+L Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL-VCWN--SLMNGFSMHGKAK--------------EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
BLAST of Cms210590.1 vs. ExPASy Swiss-Prot
Match: PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.733e-23 Identity = 62/200 (31.00%), Postives = 98/200 (49.00%), Query Frame = 0 Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPS-----------------NNVMVGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTGCGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 T V WT+ IS + GC +EA F M+L G P I+ +++L CA S V AL++MY+K G + A +F M K + + T+ G H A+E FN MQ+ K + ++F G L+ACSH G+ ++GL+YF +M++ Y++ P+IEH+GC++D+ Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV---ISWSTMISGYAYH--------------GNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
BLAST of Cms210590.1 vs. ExPASy Swiss-Prot
Match: PP323_ARATH (Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E1 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.342e-23 Identity = 66/204 (32.35%), Postives = 99/204 (48.53%), Query Frame = 0 Query: 41 TIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPS------------------NNVMVGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTGCGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 T T V WT IS + G + EA F M G P +T ++L+SGC F S +NVM+ AL+DMY+K G + A +FD K + V G L + + L EAL+ F+ M +K + ++F L AC+H+G +E G +YF+IMK++Y +SP ++H+ C+VDL Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTV-VTWTTMIAGYAL------------NGIFL----EALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDL 504
BLAST of Cms210590.1 vs. ExPASy Swiss-Prot
Match: PP385_ARATH (Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E40 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 6.226e-23 Identity = 67/208 (32.21%), Postives = 103/208 (49.52%), Query Frame = 0 Query: 41 TIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCA---DFP---------------SNNVMVGT----ALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTGCGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 T V W + IS + G EA F MR G +P +T ++LLS CA D S+++ VGT AL+DMYAK G +D A VF ++ + L+ TL +GL +H ++E F MQ+ +EV+F G + ACSH+G +++G +YF +M+ +Y + P I+H+GC+VD+ Sbjct: 236 TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTW---NTLIVGLALHH---------------AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDM 425
BLAST of Cms210590.1 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H71 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.946e-22 Identity = 65/199 (32.66%), Postives = 97/199 (48.74%), Query Frame = 0 Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPSNN-----------------VMVGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTGCGE-ALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 V W++ I +G E+ L F ++ G +P+ ++ +LS C+ S V V AL+DMY++ G + +A +VF+ M+ K + ++ GL MH G GE A+ FN M D +SF L ACSHAGLIE+G YF MK++Y + P+IEH+GC+VDL Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEK--RCIVSWTSMIAGLAMH---------------GQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDL 416
BLAST of Cms210590.1 vs. ExPASy Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.135e-22 Identity = 64/202 (31.68%), Postives = 100/202 (49.50%), Query Frame = 0 Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFP-----------------SNNVMVGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQD-FKDNVRLTGCGEA-LEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 T V W + I ++G ++A F++MR P T+V++++ A+ NV V TAL+DMYAK G + +A ++FD+M R+V + D G G+A LE F MQKG K + V+F ++ACSH+GL+E GL+ FY+MK+ Y + ++H+G +VDL Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-------------------ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDL 584
BLAST of Cms210590.1 vs. ExPASy Swiss-Prot
Match: PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.671e-22 Identity = 63/200 (31.50%), Postives = 96/200 (48.00%), Query Frame = 0 Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFP-----------------SNNVMVGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTGCGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 V WT I+ + G + EA +M G +++L+ C + +N V ALLDMYAK G + A VF+ + K L V N G+G+ H EA+E F+ M++ + D+V+F L +C+HAGLI++G+ YFY M+K+Y + PQ+EH+GC+VDL Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDL-VSWNTMLHGLGVHGH----------------GKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDL 461
BLAST of Cms210590.1 vs. ExPASy Swiss-Prot
Match: PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E41 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.336e-22 Identity = 68/202 (33.66%), Postives = 99/202 (49.01%), Query Frame = 0 Query: 42 IDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCAD------------FPSNNVM-----VGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTGCGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 I TV WT+ I R+ + +A F M++ + + T V +LS C+D F N M VG AL++MY++ G ++ A VF VMR K + + T+ GL MH EA+ F M F+ ++V+ L ACSH GL++ GL+ F MK+++ V PQIEH+GCIVDL Sbjct: 217 IKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDV---ISYNTMISGLAMH--------------GASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDL 401
BLAST of Cms210590.1 vs. ExPASy Swiss-Prot
Match: PP433_ARATH (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.832e-21 Identity = 65/208 (31.25%), Postives = 92/208 (44.23%), Query Frame = 0 Query: 42 IDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPS-----------------NNVMVGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVR------TLGIGLWMHRYVPKQDFKDNVRLTGCGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 + V WT IS + +SG EA F RM + P +T + +LS CAD S V + A++DMYAK G + A VF+ C N R T+ GL H + EAL FN M K + ++V+F L+ACSH G ++ G + F M+ Y + P IEH+GC++DL Sbjct: 212 VRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFE---------CVNERNVVTWTTIIAGLATHGH--------------GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDL 396
BLAST of Cms210590.1 vs. Araport11
Match: | (Symbols: PDE247, CLB19 | pigment defective 247, CHLOROPLAST BIOGENESIS 19 | chr1:1721523-1723025 FORWARD LENGTH=500) HSP 1 Score: 161.384 bits (407), Expect = 1.264e-46 Identity = 113/356 (31.74%), Postives = 150/356 (42.13%), Query Frame = 0 Query: 6 IATILRQPFLPHQQNPNQNLKKRPQISIQTNNRKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPS--------------------NNVMVGTA-------------------------------LLDMYAKFGRMDLATVVFDVMR------------------------------------------VKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTG--------CG----------------------------------EALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 + I + H+ + N +++ Q ST +TTV WTS I+ R+G + EAA EF+ M L G P+ ITF+ LLSGC DF S N+VMVGTA ++D Y + G++D A +FD M + LN C N+ L GLW+HRYV QDFK+NVR++ CG E+L YF MQ+ FK D V+FTGALTACSH GL+E+GL+YF IMK YR+SP+IEH+GC+VDL Sbjct: 6 VVGITSPALITHKNHANPKIQRHNQ---------STSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDL 352
BLAST of Cms210590.1 vs. Araport11
Match: | (Symbols: PDE247, CLB19 | pigment defective 247, CHLOROPLAST BIOGENESIS 19 | chr1:1721523-1723025 FORWARD LENGTH=500) HSP 1 Score: 161.384 bits (407), Expect = 1.264e-46 Identity = 113/356 (31.74%), Postives = 150/356 (42.13%), Query Frame = 0 Query: 6 IATILRQPFLPHQQNPNQNLKKRPQISIQTNNRKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPS--------------------NNVMVGTA-------------------------------LLDMYAKFGRMDLATVVFDVMR------------------------------------------VKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTG--------CG----------------------------------EALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 + I + H+ + N +++ Q ST +TTV WTS I+ R+G + EAA EF+ M L G P+ ITF+ LLSGC DF S N+VMVGTA ++D Y + G++D A +FD M + LN C N+ L GLW+HRYV QDFK+NVR++ CG E+L YF MQ+ FK D V+FTGALTACSH GL+E+GL+YF IMK YR+SP+IEH+GC+VDL Sbjct: 6 VVGITSPALITHKNHANPKIQRHNQ---------STSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDL 352
BLAST of Cms210590.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:7009570-7011852 FORWARD LENGTH=760) HSP 1 Score: 104.76 bits (260), Expect = 1.350e-25 Identity = 64/199 (32.16%), Postives = 102/199 (51.26%), Query Frame = 0 Query: 45 TVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPS-----------------NNVMVGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTGCGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 V WTS I+ ++G +EA F M++ G P+ +T ++L C + + +NV VG+AL+DMYAK GR++L+ +VF++M K L VC N +L G MH E + F + + K D +SFT L+AC GL ++G +YF +M + Y + P++EH+ C+V+L Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL-VCWN--SLMNGFSMHGKAK--------------EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
BLAST of Cms210590.1 vs. Araport11
Match: | (Symbols: MEF21 | mitochondrial editing factor 21 | chr2:8844160-8845764 FORWARD LENGTH=534) HSP 1 Score: 100.523 bits (249), Expect = 2.780e-24 Identity = 62/200 (31.00%), Postives = 98/200 (49.00%), Query Frame = 0 Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPS-----------------NNVMVGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTGCGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 T V WT+ IS + GC +EA F M+L G P I+ +++L CA S V AL++MY+K G + A +F M K + + T+ G H A+E FN MQ+ K + ++F G L+ACSH G+ ++GL+YF +M++ Y++ P+IEH+GC++D+ Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV---ISWSTMISGYAYH--------------GNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
BLAST of Cms210590.1 vs. Araport11
Match: | (Symbols: MEF21 | mitochondrial editing factor 21 | chr2:8844170-8845764 FORWARD LENGTH=504) HSP 1 Score: 100.138 bits (248), Expect = 3.425e-24 Identity = 60/200 (30.00%), Postives = 98/200 (49.00%), Query Frame = 0 Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPS-----------------NNVMVGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTGCGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 T V WT+ IS + GC +EA F M+L G P I+ +++L CA S V AL++MY+K G + A +F M K + + + + + N A+E FN MQ+ K + ++F G L+ACSH G+ ++GL+YF +M++ Y++ P+IEH+GC++D+ Sbjct: 175 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTM------------ISGYAYHGNAH-----GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 357
BLAST of Cms210590.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:10496228-10498192 FORWARD LENGTH=654) HSP 1 Score: 100.138 bits (248), Expect = 5.421e-24 Identity = 66/204 (32.35%), Postives = 99/204 (48.53%), Query Frame = 0 Query: 41 TIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPS------------------NNVMVGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTGCGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 T T V WT IS + G + EA F M G P +T ++L+SGC F S +NVM+ AL+DMY+K G + A +FD K + V G L + + L EAL+ F+ M +K + ++F L AC+H+G +E G +YF+IMK++Y +SP ++H+ C+VDL Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTV-VTWTTMIAGYAL------------NGIFL----EALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDL 504
BLAST of Cms210590.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:4968384-4970030 REVERSE LENGTH=548) HSP 1 Score: 99.7525 bits (247), Expect = 6.328e-24 Identity = 67/208 (32.21%), Postives = 103/208 (49.52%), Query Frame = 0 Query: 41 TIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCA---DFP---------------SNNVMVGT----ALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTGCGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 T V W + IS + G EA F MR G +P +T ++LLS CA D S+++ VGT AL+DMYAK G +D A VF ++ + L+ TL +GL +H ++E F MQ+ +EV+F G + ACSH+G +++G +YF +M+ +Y + P I+H+GC+VD+ Sbjct: 236 TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTW---NTLIVGLALHH---------------AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDM 425
BLAST of Cms210590.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:28030521-28032452 FORWARD LENGTH=643) HSP 1 Score: 97.8265 bits (242), Expect = 2.989e-23 Identity = 65/199 (32.66%), Postives = 97/199 (48.74%), Query Frame = 0 Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPSNN-----------------VMVGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTGCGE-ALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 V W++ I +G E+ L F ++ G +P+ ++ +LS C+ S V V AL+DMY++ G + +A +VF+ M+ K + ++ GL MH G GE A+ FN M D +SF L ACSHAGLIE+G YF MK++Y + P+IEH+GC+VDL Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEK--RCIVSWTSMIAGLAMH---------------GQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDL 416
BLAST of Cms210590.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:28030476-28032452 FORWARD LENGTH=658) HSP 1 Score: 97.8265 bits (242), Expect = 3.107e-23 Identity = 65/199 (32.66%), Postives = 97/199 (48.74%), Query Frame = 0 Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFPSNN-----------------VMVGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQDFKDNVRLTGCGE-ALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 V W++ I +G E+ L F ++ G +P+ ++ +LS C+ S V V AL+DMY++ G + +A +VF+ M+ K + ++ GL MH G GE A+ FN M D +SF L ACSHAGLIE+G YF MK++Y + P+IEH+GC+VDL Sbjct: 250 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEK--RCIVSWTSMIAGLAMH---------------GQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDL 431
BLAST of Cms210590.1 vs. Araport11
Match: | (Symbols: CRR22 | CHLORORESPIRATORY REDUCTION22 | chr1:3791454-3793883 REVERSE LENGTH=809) HSP 1 Score: 97.8265 bits (242), Expect = 3.180e-23 Identity = 64/202 (31.68%), Postives = 100/202 (49.50%), Query Frame = 0 Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSRITFVTLLSGCADFP-----------------SNNVMVGTALLDMYAKFGRMDLATVVFDVMRVKILNVCANVRTLGIGLWMHRYVPKQD-FKDNVRLTGCGEA-LEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFYIMKKIYRVSPQIEHHGCIVDL 226 T V W + I ++G ++A F++MR P T+V++++ A+ NV V TAL+DMYAK G + +A ++FD+M R+V + D G G+A LE F MQKG K + V+F ++ACSH+GL+E GL+ FY+MK+ Y + ++H+G +VDL Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-------------------ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDL 584 The following BLAST results are available for this feature:
BLAST of Cms210590.1 vs. ExPASy TrEMBL
Analysis Date: 2024-02-02 (Blastp of Citrus mangshanensis cv. MSYG v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Cms210590.1 vs. ExPASy Swiss-Prot
Analysis Date: 2024-02-02 (Blastp of Citrus mangshanensis cv. MSYG v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Cms210590.1 vs. Araport11
Analysis Date: 2024-02-02 (Blastp of Citrus mangshanensis cv. MSYG v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus mangshanensis cv. MSYG v1.0 proteins
Date Performed: 2024-02-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Cms210590.1-MSYG_v1 ID=Cms210590.1-MSYG_v1; Name=Cms210590.1; organism=Citrus mangshanensis; type=mRNA; length=681bpback to top protein sequence of Cms210590.1-MSYG_v1 >Cms210590.1-MSYG_v1 ID=Cms210590.1-MSYG_v1; Name=Cms210590.1-MSYG_v1; organism=Citrus mangshanensis; type=polypeptide; length=227bpback to top mRNA from alignment at contig175:2216986..2218067+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1082bp; location=Sequence derived from: contig175:2216986..2218067+ (Citrus mangshanensisback to top Coding sequence (CDS) from alignment at contig175:2216986..2218067+ >Cms210590.1-MSYG_v1 ID=Cms210590.1-MSYG_v1; Name=Cms210590.1; organism=Citrus mangshanensis; type=CDS; length=681bp; location=Sequence derived from: contig175:2216986..2218067+ (Citrus mangshanensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|