Cms210660.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cms210660.1 vs. ExPASy TrEMBL
Match: V4SA84|V4SA84_CITCL (Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10029176mg PE=4 SV=1) HSP 1 Score: 495.352 bits (1274), Expect = 6.198e-177 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0 Query: 1 MENSRPATGYPAPTHNGYPPPNTAYPYSAPPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVAVNFWAIF 243
MENSRPATGYPAPTHNGYPPPNTAYPYSAPPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVAVNFWAIF
Sbjct: 1 MENSRPATGYPAPTHNGYPPPNTAYPYSAPPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVAVNFWAIF 243
BLAST of Cms210660.1 vs. ExPASy TrEMBL
Match: A0A2H5Q9A8|A0A2H5Q9A8_CITUN (Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_208250 PE=4 SV=1) HSP 1 Score: 479.559 bits (1233), Expect = 8.501e-171 Identity = 235/237 (99.16%), Postives = 237/237 (100.00%), Query Frame = 0 Query: 1 MENSRPATGYPAPTHNGYPPPNTAYPYSAPPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVAV 237
MENSRPATGYPAPTHNGYPPPNTAYPYSAPPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRV++
Sbjct: 1 MENSRPATGYPAPTHNGYPPPNTAYPYSAPPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVSM 237
BLAST of Cms210660.1 vs. ExPASy TrEMBL
Match: A0A067ET51|A0A067ET51_CITSI (Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g043833mg PE=4 SV=1) HSP 1 Score: 477.248 bits (1227), Expect = 7.970e-170 Identity = 234/237 (98.73%), Postives = 236/237 (99.58%), Query Frame = 0 Query: 1 MENSRPATGYPAPTHNGYPPPNTAYPYSAPPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVAV 237
MENSRPATGYPAPTHNGYPPPNTAYPYSA PPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRV++
Sbjct: 1 MENSRPATGYPAPTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVSM 237
BLAST of Cms210660.1 vs. ExPASy TrEMBL
Match: A0A5C7IWR6|A0A5C7IWR6_9ROSI (Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002117 PE=4 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 1.900e-80 Identity = 133/242 (54.96%), Postives = 166/242 (68.60%), Query Frame = 0 Query: 1 MEN-SRPATGYPAPTHNGYPPPNTAYPYSAPPPQSQPYSYPPYYQPPTR--RNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSK--GSGSLVGGARKCRVAV 237
MEN SR TGYPAP NG+P P Y PP R + LR ++V VA VI G LLIFWLVVRP +PEF L+SLSVSNFS NQS+VT WDA AYNPNKKM VSYYDVVS I++ ++LT T + PF QDTR +T L+AKFS+ID YV+ K+++ +N++R G+V F+ +LEAIAGF+YG WR RRR++RVWC +VP+NVSS GSG+LVGG R C+V +
Sbjct: 1 MENPSRLVTGYPAPNPNGHPAHPYPAPPPPLSQPYHYPPYYHPAAPPYPNPRRSFLRTILVVTVAFFVIFGSVLLIFWLVVRPHLPEFQLSSLSVSNFSANQSRVTATWDARYHAYNPNKKMTVSYYDVVSYIFFKSDFLTSTQIAPFKQDTRNQTDLTAKFSIIDYYVDAKLVNDLNSQRTHGSVTFNVKLEAIAGFRYGAWRARRRVIRVWCNNVPINVSSNSGGSGNLVGGPRNCKVGM 242
BLAST of Cms210660.1 vs. ExPASy TrEMBL
Match: A0A8B8NKQ7|A0A8B8NKQ7_9MYRT (NDR1/HIN1-like protein 26 OS=Rhodamnia argentea OX=178133 GN=LOC115735553 PE=4 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.119e-71 Identity = 122/247 (49.39%), Postives = 159/247 (64.37%), Query Frame = 0 Query: 2 ENSRP-ATGYPAP----THNGYPP---PNTAYPYSAPPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQS--QVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNV-SSKGSGSLVGGARKCRVAV 237
+NSRP TGYPAP NGYPP N +YPY+APPPQ Y Y P RR LR +VA +A VI+G L I WLV+RPR+PEF + SL+V+NFS + S V+G+W + NPNKKM++SY D+ S I+Y L+ T LPPF Q TR +T + A F+ +D+YV+ + INAERARGAV F RL A+A FK G WR RRRL+RV+C ++ V + + G+G L GG R+CRV +
Sbjct: 3 DNSRPPVTGYPAPPPGAYSNGYPPGAHSNASYPYAAPPPQYANYQY----YAPDRRATFLRYFLVAMIAFFVIIGTVLFIVWLVLRPRLPEFRVQSLTVTNFSVSNSSQHVSGDWLVQFQVANPNKKMKISYADIASSIFYKSESLSATRLPPFDQGTRNQTVVQASFAAVDTYVDGWAVSEINAERARGAVSFQVRLLALARFKAGWWRARRRLIRVFCVNLAVGLPPNNGTGKLTGGVRECRVGL 245
BLAST of Cms210660.1 vs. ExPASy TrEMBL
Match: A0A6A6NBG5|A0A6A6NBG5_HEVBR (Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_000482 PE=4 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 6.047e-70 Identity = 121/238 (50.84%), Postives = 164/238 (68.91%), Query Frame = 0 Query: 4 SRPATGYP---APTHNGYPPPNTAYPYSAPPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNF--STNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKG-SGSLVGGARKCRV 235
SRPATGYP A NGYPPP +A Y APPP + PY Y P R L+R L+ A + VTV+ L I WLV++P PEFH+TS SVSN ST+ ++TGNW+A + YNPNKK+++SY +++S I Y L++T +PPF QDT+ T + A+FSV+DSYV+ +V++ IN +RA GAV F+ R+ A GFK GG+R RRRL+RVWC +V + +++ G SG+L GGARKC+V
Sbjct: 5 SRPATGYPVHPAQHPNGYPPPQSATAY-APPPPNNPYYYNQPPAYPNPRAALIRRLIAALIVVTVLFLTILFICWLVIQPHRPEFHVTSFSVSNLNVSTSSQRLTGNWNARFQVYNPNKKLKISYDEIMSSILYKSEILSQTRIPPFKQDTKNHTTMDAEFSVVDSYVDERVVNGINGDRANGAVGFEVRVVADVGFKVGGFRARRRLLRVWCDNVSIGLTANGRSGNLTGGARKCKV 241
BLAST of Cms210660.1 vs. ExPASy TrEMBL
Match: A0A7J7E048|A0A7J7E048_TRIWF (Protein YLS9 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW02G00713 PE=4 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 3.367e-68 Identity = 118/242 (48.76%), Postives = 160/242 (66.12%), Query Frame = 0 Query: 4 SRPATGYPAPTHNGYPPP--NTAYPYSAPPPQSQPYSYPPYYQ---PPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFS-TNQSQ-VTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVS-SKGSGSLVGGARKCRVAV 237
SRP TGYP + NGYP P +AYPY A PPQ+QP++Y YY PP R R V + +TVI L I WLV+RPR+PEF + SLSVSNF+ T+ SQ +TG+W+ ++ YNPN +M +SY DV ++Y +L T +PPF Q + +T + A FS +SYV+R+VLD I+A+RARG V F+ ++ A+ F+ G WR R R++RV+C DVPV ++ S SG LVGGAR+C V V
Sbjct: 5 SRPVTGYP--SANGYPAPPLGSAYPYQAQPPQNQPHAY--YYNAPPPPDPRLAFYRRFCVIIIGLTVIFATVLFICWLVIRPRVPEFRVDSLSVSNFNVTSSSQTLTGSWNLRLQVYNPNSRMTLSYDDVRPSVFYKTEFLVETRIPPFQQGKKNQTFVDASFSASNSYVDRRVLDGISADRARGTVSFNVKVVAVVKFRTGAWRARARVLRVYCTDVPVGITASSTSGKLVGGARECSVRV 242
BLAST of Cms210660.1 vs. ExPASy TrEMBL
Match: A0A7J7DF53|A0A7J7DF53_TRIWF (Protein YLS9 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW07G00489 PE=4 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 2.214e-67 Identity = 117/242 (48.35%), Postives = 157/242 (64.88%), Query Frame = 0 Query: 4 SRPATGYPAPTHNGYP--PPNTAYPYSAPPPQSQPYSYPPYYQ---PPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQ--VTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVS-SKGSGSLVGGARKCRVAV 237
SRP TGYP T NGYP PP + YPY APPPQ+ ++Y YY PP R+ R + VA+TVI L I+WL++RP +PEF + SLSVSNF+ S VTG+W ++ YN N++M VSY DV I+Y+ L T +PPF Q + +T + A FS +SYV+R V+D I+A+RARG V F+ ++ A+ F+ G WR R R++RV+C DVPV ++ S SG LVGGAR+CRV V
Sbjct: 5 SRPVTGYP--TANGYPAPPPGSVYPYQAPPPQNPSHAY--YYNAPPPPDPRSAFFRRFCLIIVALTVIFATVLFIYWLIIRPTVPEFRVDSLSVSNFNVTSSSQTVTGSWYLRLQVYNTNRRMTVSYDDVRPSIFYETESLVETRIPPFQQGKKNQTFVDASFSATNSYVDRWVVDGISADRARGNVSFNVKVVAVVNFRTGAWRARARVLRVYCRDVPVGITASSRSGKLVGGARECRVGV 242
BLAST of Cms210660.1 vs. ExPASy TrEMBL
Match: A0A1J6JYX7|A0A1J6JYX7_NICAT (Protein yls9 OS=Nicotiana attenuata OX=49451 GN=YLS9_1 PE=4 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.151e-63 Identity = 112/253 (44.27%), Postives = 146/253 (57.71%), Query Frame = 0 Query: 3 NSRPATGYPAPTHNGY------------PPPNTAYPYSAPPPQSQPYSYPPYYQP----PTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERAR-GAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVS-SKGSGSLVGGARKCRVAV 237
N P TGYPA PPP TAYPY+APPP S Y PYYQ +R LR ++ A+A VI G + I WL++RPR+PEF + SLSVSN + + S ++ NWD NPNKK+ + Y DV + ++YD L+ T +PPF QD R T A F+ SYVE + D +N ERAR A+ FD R+ A FK G WR RRR +RV+C D+ V V +K SG+L+GG R+CRV +
Sbjct: 5 NRPPVTGYPAAAPPNPNGYGGYGGSAQPPPPGTAYPYAAPPPSSTTYYNNPYYQQHNPYAVQRATFLRRIIAFAIAAMVITGTFVFIVWLILRPRLPEFRVDSLSVSNLNLSNSLISANWDLRYTVRNPNKKLTLYYDDVAAAVFYDSASLSDTTVPPFFQDKRAETAQKASFATSGSYVENRAFDGMNKERARSSAIGFDVRMVARVRFKAGAWRARRRFIRVYCKDLSVGVGPNKSSGNLLGGPRQCRVGL 257
BLAST of Cms210660.1 vs. ExPASy TrEMBL
Match: A0A218W831|A0A218W831_PUNGR (NDR1/HIN1-like protein 10 OS=Punica granatum OX=22663 GN=LOC116209830 PE=4 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 7.393e-63 Identity = 114/248 (45.97%), Postives = 152/248 (61.29%), Query Frame = 0 Query: 2 ENSRP-ATGYPAP----THNGYPPP---NTAYPYSAPPPQSQPYSY-PPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQ-VTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKG--SGSLVGGARKCRVAV 237
EN RP TGYP P NGYP NTAYPY+APPPQ Y Y P YQ RRN +R +VA ++ +I G + I WLV+RPRIPEF + S+ V+NFS SQ V+G W + NPNKKM++SY + S ++Y ++T T +PPF Q TR +T + FSV D+YV L+++N+ERA+G V F R+ A F+ G WR R RL++VWC D+ V +SS + LVGG R C+V +
Sbjct: 3 ENPRPPVTGYPVPPAGAYSNGYPAAPASNTAYPYAAPPPQHNNYQYYGPQYQ---RRNAFIRYFLVALISFFIITGSIIFIVWLVLRPRIPEFTVQSVKVTNFSVVDSQHVSGIWQVRLLVANPNKKMKISYATMDSTLFYKSEFITATRIPPFDQGTRNQTAVDTSFSVQDAYVAVSALNTLNSERAKGTVPFRIRVLAWVRFRSGWWRARSRLLKVWCEDLTVGLSSSNNRTADLVGGERDCKVRI 247
BLAST of Cms210660.1 vs. ExPASy Swiss-Prot
Match: NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.148e-17 Identity = 54/169 (31.95%), Postives = 82/169 (48.52%), Query Frame = 0 Query: 52 LLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIE--AYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFS----VIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDV 214
LL V +++ VILG A LIFWL+VRPR +FH+T S++ F ++ A+ NPNK++ + Y + + YY+G + L PF Q + T L+ F VI + + + L NAER G + + FK G + RR +V C D+
Sbjct: 37 LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTL---NAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDL 202
BLAST of Cms210660.1 vs. ExPASy Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.522e-10 Identity = 46/182 (25.27%), Postives = 85/182 (46.70%), Query Frame = 0 Query: 61 VAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTN-QSQVTGNWDAAIEAYNPNKKMRVSYYDV-VSGIYYDGNYLTRTPLPPFSQDTRERTPLSAK-----FSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRV 235
+ + V+LG A LI WL+ RP +FH+T ++ F+ + + + N D NPN+++ V Y ++ V G Y D + + F Q + T + K ++D + + + +N++ R D +L FK+G ++ R ++ C D+ V ++S + V KC V
Sbjct: 53 ITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYR----IDAKLRLKIRFKFGLIKSWRFKPKIKC-DLKVPLTSNSTSGFVFQPTKCDV 229
BLAST of Cms210660.1 vs. ExPASy Swiss-Prot
Match: NHL13_ARATH (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 6.099e-10 Identity = 57/237 (24.05%), Postives = 105/237 (44.30%), Query Frame = 0 Query: 19 PPPNTAYPYSAPPPQSQPYSYPP------YYQPPTRRNN------LLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQ-SQVTGNWDAAIEAYNPNKKMRVSYYDVVSG--IYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVAVNFW 240
PPP+T Y P+ Q Y PP + Q ++ N + A + V+ G + + +L+ RP P++ + SVS + N S ++ +++ + + N N K+ V YY+ S +YY+ ++ +P F Q + T + S + + + E ++ V F +++A K+G +T +V V C DV V+ + S + +RKC V+ W
Sbjct: 32 PPPST---YVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGV-YYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDC-DVTVDKLTAPSRIV---SRKCSHDVDLW 260
BLAST of Cms210660.1 vs. ExPASy Swiss-Prot
Match: Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 7.116e-10 Identity = 37/161 (22.98%), Postives = 75/161 (46.58%), Query Frame = 0 Query: 73 IFWLVVRPRIPEFHLTSLSVSNFS--TNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGAR 231
I +L +RP+ + + + SV F+ N + + I++YNP K + V Y+ + + + + PF Q + T + + + + + + AE+++G ++ + + A +K +R+RRR ++ C V +NV+ S SL G R
Sbjct: 57 ITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVT---SSSLDGFQR 214
BLAST of Cms210660.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:11669769-11670500 FORWARD LENGTH=243) HSP 1 Score: 148.288 bits (373), Expect = 1.133e-43 Identity = 100/247 (40.49%), Postives = 147/247 (59.51%), Query Frame = 0 Query: 4 SRPATGYPAPTH-----------NGYPPP--NTAYPYSAPPPQSQPYSYPPYYQP-PTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERA-RGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNV-SSKGSGSLVGGARKCR 234
SRPATGYP P NGYP P TAYPY ++ PYY P P R ++R L + ++LG L IF+L+VRP++P+ +L SLSVSNF+ + +QV+G WD ++ NPN KM + Y + +YY+ L+ T L PF Q +++T ++A SV +YV+ +++DSI ER+ +G V+FD R+ + F+YG +R RRR V V+C DV V V S G G +VG +++C+
Sbjct: 5 SRPATGYPYPYPYPNPQQQQPPTNGYPNPAAGTAYPYQ---------NHNPYYAPQPNPRAVIIRRLFIVFTTFLLLLGLILFIFFLIVRPQLPDVNLNSLSVSNFNVSNNQVSGKWDLQLQFRNPNSKMSLHYETALCAMYYNRVSLSETRLQPFDQGKKDQTVVNATLSVSGTYVDGRLVDSIGKERSVKGNVEFDLRMISYVTFRYGAFR-RRRYVTVYCDDVAVGVPVSSGEGKMVGSSKRCK 241
BLAST of Cms210660.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:19446970-19447872 FORWARD LENGTH=300) HSP 1 Score: 93.2041 bits (230), Expect = 3.261e-22 Identity = 61/218 (27.98%), Postives = 98/218 (44.95%), Query Frame = 0 Query: 25 YPYSAPPP-----QSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGN------YLTRTPLPPFSQDTRERTPLSAKFSVIDSY---VERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSS-KGSGSLV 227
YPY+ PP S P P YQ P + +R + + + V+L + I WLV+RP+IP F + + SVSNF+ + W A + N N K++ Y+D + G+ Y N +L P +T++ + + D V V+D + ER G V F R+ FK GW R ++V+C + V G+G+++
Sbjct: 74 YPYAQAPPASYYGSSYPAQQNPVYQRPAS-SGFVRGIFTGLIVLVVLLCISTTITWLVLRPQIPLFSVNNFSVSNFNVTGPVFSAQWTANLTIENQNTKLK-GYFDRIQGLVYHQNAVGEDEFLATAFFQPVFVETKKSVVIGETLTAGDKEQPKVPSWVVDEMKKERETGTVTFSLRMAVWVTFKTDGWAARESGLKVFCGKLKVGFEGISGNGAVL 289
BLAST of Cms210660.1 vs. Araport11
Match: | (Symbols: NHL10, ATNHL10, YLS9 | NDR1/HIN1-LIKE, ARABIDOPSIS NDR1/HIN1-LIKE 10, YELLOW-LEAF-SPECIFIC GENE 9 | chr2:15110635-15111318 FORWARD LENGTH=227) HSP 1 Score: 82.0333 bits (201), Expect = 1.185e-18 Identity = 54/169 (31.95%), Postives = 82/169 (48.52%), Query Frame = 0 Query: 52 LLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIE--AYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFS----VIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDV 214
LL V +++ VILG A LIFWL+VRPR +FH+T S++ F ++ A+ NPNK++ + Y + + YY+G + L PF Q + T L+ F VI + + + L NAER G + + FK G + RR +V C D+
Sbjct: 37 LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTL---NAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDL 202
BLAST of Cms210660.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:7647056-7647679 REVERSE LENGTH=207) HSP 1 Score: 66.6254 bits (161), Expect = 3.880e-13 Identity = 39/175 (22.29%), Postives = 81/175 (46.29%), Query Frame = 0 Query: 46 PTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFS-TNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVS 219
P RR +L+ + + + + + LI WL +P+ + + + SV NF+ TN + ++ + I+++NPN ++ V Y V + + L + PF Q + + V + + ++ + G + F+ ++A FK G W++ R ++ C V V++S
Sbjct: 19 PLRRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATFQFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAVSKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLS 193
BLAST of Cms210660.1 vs. Araport11
Match: | (Symbols: NHL3 | NDR1/HIN1-like 3 | chr5:1931016-1931711 REVERSE LENGTH=231) HSP 1 Score: 62.7734 bits (151), Expect = 1.562e-11 Identity = 46/182 (25.27%), Postives = 85/182 (46.70%), Query Frame = 0 Query: 61 VAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTN-QSQVTGNWDAAIEAYNPNKKMRVSYYDV-VSGIYYDGNYLTRTPLPPFSQDTRERTPLSAK-----FSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRV 235
+ + V+LG A LI WL+ RP +FH+T ++ F+ + + + N D NPN+++ V Y ++ V G Y D + + F Q + T + K ++D + + + +N++ R D +L FK+G ++ R ++ C D+ V ++S + V KC V
Sbjct: 53 ITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYR----IDAKLRLKIRFKFGLIKSWRFKPKIKC-DLKVPLTSNSTSGFVFQPTKCDV 229
BLAST of Cms210660.1 vs. Araport11
Match: | (Symbols: NHL13 | NDR/HIN1-like 13 | chr2:11566383-11567165 FORWARD LENGTH=260) HSP 1 Score: 61.2326 bits (147), Expect = 6.237e-11 Identity = 57/237 (24.05%), Postives = 105/237 (44.30%), Query Frame = 0 Query: 19 PPPNTAYPYSAPPPQSQPYSYPP------YYQPPTRRNN------LLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQ-SQVTGNWDAAIEAYNPNKKMRVSYYDVVSG--IYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVAVNFW 240
PPP+T Y P+ Q Y PP + Q ++ N + A + V+ G + + +L+ RP P++ + SVS + N S ++ +++ + + N N K+ V YY+ S +YY+ ++ +P F Q + T + S + + + E ++ V F +++A K+G +T +V V C DV V+ + S + +RKC V+ W
Sbjct: 32 PPPST---YVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGV-YYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDC-DVTVDKLTAPSRIV---SRKCSHDVDLW 260
BLAST of Cms210660.1 vs. Araport11
Match: | (Symbols: NHL13 | NDR/HIN1-like 13 | chr2:11566383-11567165 FORWARD LENGTH=260) HSP 1 Score: 61.2326 bits (147), Expect = 6.237e-11 Identity = 57/237 (24.05%), Postives = 105/237 (44.30%), Query Frame = 0 Query: 19 PPPNTAYPYSAPPPQSQPYSYPP------YYQPPTRRNN------LLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQ-SQVTGNWDAAIEAYNPNKKMRVSYYDVVSG--IYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVAVNFW 240
PPP+T Y P+ Q Y PP + Q ++ N + A + V+ G + + +L+ RP P++ + SVS + N S ++ +++ + + N N K+ V YY+ S +YY+ ++ +P F Q + T + S + + + E ++ V F +++A K+G +T +V V C DV V+ + S + +RKC V+ W
Sbjct: 32 PPPST---YVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGV-YYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDC-DVTVDKLTAPSRIV---SRKCSHDVDLW 260
BLAST of Cms210660.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:2559672-2560337 REVERSE LENGTH=221) HSP 1 Score: 60.4622 bits (145), Expect = 7.303e-11 Identity = 37/161 (22.98%), Postives = 75/161 (46.58%), Query Frame = 0 Query: 73 IFWLVVRPRIPEFHLTSLSVSNFS--TNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGAR 231
I +L +RP+ + + + SV F+ N + + I++YNP K + V Y+ + + + + PF Q + T + + + + + + AE+++G ++ + + A +K +R+RRR ++ C V +NV+ S SL G R
Sbjct: 57 ITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVT---SSSLDGFQR 214
BLAST of Cms210660.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:19450750-19451376 FORWARD LENGTH=208) HSP 1 Score: 60.4622 bits (145), Expect = 7.623e-11 Identity = 56/207 (27.05%), Postives = 90/207 (43.48%), Query Frame = 0 Query: 52 LLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQ-SQVTGNWDAAIEAYNPNKKMRVSYYD--VVSGIYYDGNYLTRTPLPPFSQDTRE-----------RTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGG-------ARKCRVAV 237
++R L A +A VI+ + + W+++RP P F L +V F+ +Q + +T N+ I + NPN K+ + YYD V Y + RT +PP Q +E P++ SV ++ E+ RG V R + +K T + + V C +N+ +K +G LVG A KC V V
Sbjct: 15 VVRKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTIASRNPNSKIGI-YYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPYNSV-----------ALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAF-INLGNKAAGVLVGDNAVKYTLANKCSVNV 208
BLAST of Cms210660.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:22807440-22808114 REVERSE LENGTH=224) HSP 1 Score: 59.6918 bits (143), Expect = 1.402e-10 Identity = 37/153 (24.18%), Postives = 69/153 (45.10%), Query Frame = 0 Query: 61 VAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSG-IYYDGNYLTRTPLP-PFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWC 211
+++ + LG I W+ ++P P H+ S+S S T + I A+NPN+ + + YYD + G +YY + T L PF QD + + + S V + + +R +G + F ++ ++ FK W ++ + C
Sbjct: 49 LSLLLCLGIITFILWISLQPHRPRVHIRGFSISGLSRPDGFETSHISFKITAHNPNQNVGI-YYDSMEGSVYYKEKRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWMEMERDRNQGKIMFRLKVRSMIRFKVYTWHSKSHKMYASC 200 The following BLAST results are available for this feature:
BLAST of Cms210660.1 vs. ExPASy TrEMBL
Analysis Date: 2024-02-02 (Blastp of Citrus mangshanensis cv. MSYG v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Cms210660.1 vs. ExPASy Swiss-Prot
Analysis Date: 2024-02-02 (Blastp of Citrus mangshanensis cv. MSYG v1.0 proteins vs UniProt Swissprot) Total hits: 4 Position : 0 Zoom : x 1
BLAST of Cms210660.1 vs. Araport11
Analysis Date: 2024-02-02 (Blastp of Citrus mangshanensis cv. MSYG v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus mangshanensis cv. MSYG v1.0 proteins
Date Performed: 2024-02-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Cms210660.1-MSYG_v1 ID=Cms210660.1-MSYG_v1; Name=Cms210660.1; organism=Citrus mangshanensis; type=mRNA; length=732bpback to top protein sequence of Cms210660.1-MSYG_v1 >Cms210660.1-MSYG_v1 ID=Cms210660.1-MSYG_v1; Name=Cms210660.1-MSYG_v1; organism=Citrus mangshanensis; type=polypeptide; length=244bpback to top mRNA from alignment at contig175:2295079..2299360+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=4282bp; location=Sequence derived from: contig175:2295079..2299360+ (Citrus mangshanensisback to top Coding sequence (CDS) from alignment at contig175:2295079..2299360+ >Cms210660.1-MSYG_v1 ID=Cms210660.1-MSYG_v1; Name=Cms210660.1; organism=Citrus mangshanensis; type=CDS; length=732bp; location=Sequence derived from: contig175:2295079..2299360+ (Citrus mangshanensisback to top |