Cmt030980.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cmt030980.1 vs. ExPASy TrEMBL
Match: A0A2H5P8P5|A0A2H5P8P5_CITUN (J domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_114020 PE=4 SV=1) HSP 1 Score: 392.889 bits (1008), Expect = 1.452e-137 Identity = 199/207 (96.14%), Postives = 200/207 (96.62%), Query Frame = 0 Query: 1 MASPLAYKDAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNPNDIPGFGRYTVSYLVHRLASETKSWYGVLGLKEGHGGGTAGVEEIKKHYEVLSTLFQQPNMCSFVEAKNENKLVTEAWEVLSDARRKEAYDLLMGFTNRKNNNIINGQFVKSSETFRNPSSASSSTASSPLPLLDHRAVTRKIVKIRRPPLKSPNLFL 207 MASPLAYKDAADGIAK YLIDKDTEACRDTLRAIVAVLHDTNKNKNLNPNDIPGFGR+T SYLVHRLASETKSWYGVLGLKEGHGGG AGVEEI KHYEVLSTLFQQPNMCSFVEAKN NKLVTEAWEVLSDARRKEAYDLLMGFTNRKNN IIN QFVKSSETFRNPSSASSSTASSPLPLLDHRAVTRKIVKIRRPPLKSPNLFL Sbjct: 1 MASPLAYKDAADGIAKGYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNPNDIPGFGRHTASYLVHRLASETKSWYGVLGLKEGHGGGAAGVEEINKHYEVLSTLFQQPNMCSFVEAKNANKLVTEAWEVLSDARRKEAYDLLMGFTNRKNNKIINFQFVKSSETFRNPSSASSSTASSPLPLLDHRAVTRKIVKIRRPPLKSPNLFL 207
BLAST of Cmt030980.1 vs. ExPASy TrEMBL
Match: A0A067ERX2|A0A067ERX2_CITSI (J domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g039157mg PE=4 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 3.037e-134 Identity = 195/207 (94.20%), Postives = 196/207 (94.69%), Query Frame = 0 Query: 1 MASPLAYKDAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNPNDIPGFGRYTVSYLVHRLASETKSWYGVLGLKEGHGGGTAGVEEIKKHYEVLSTLFQQPNMCSFVEAKNENKLVTEAWEVLSDARRKEAYDLLMGFTNRKNNNIINGQFVKSSETFRNPSSASSSTASSPLPLLDHRAVTRKIVKIRRPPLKSPNLFL 207 MASPLAYKDAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNPNDIPGFGRYT SYLVHRLASETKSWYGVLGLKEG GGG VEEI KHYEVLSTLFQQPNMCSFVE KN NKLVTEAWEVLSDARRKEAYDLLMGFTNRKNNN+IN QFVKSSETFRNPSSASSSTASSPLPLLDHRAVTRKIVKI RPP KSPNLFL Sbjct: 1 MASPLAYKDAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNPNDIPGFGRYTASYLVHRLASETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDLLMGFTNRKNNNVINVQFVKSSETFRNPSSASSSTASSPLPLLDHRAVTRKIVKISRPPPKSPNLFL 207
BLAST of Cmt030980.1 vs. ExPASy TrEMBL
Match: V4SG80|V4SG80_CITCL (J domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10029411mg PE=4 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.609e-29 Identity = 68/158 (43.04%), Postives = 97/158 (61.39%), Query Frame = 0 Query: 1 MASPLAYKDAADGIAKEYLIDKDTEACRDTL------RAIVAVLHDTNKNKNLNPNDIPGFGRYTVSYLVHRLASETKSWYGVLGLKEGHGGGTAGVEEIKKHYEVLSTLFQQPNMCSFVEAKNENKLVTEAWEVLSDARRKEAYDLLMGFTNRKNNN 152 M PL AA+ + + LI+ + EACRD + I A L+ + NPN +PG Y SY+VH++A +TKSWY VLG+K+ AG +EI++ YE L+ LF P+ CS V A+ N L+ EAWEVLS+ +R++AYD+LMG+ N N+N Sbjct: 1 MPPPLCNPVAAEALFPK-LINMEAEACRDMAEELFINKNIDAALYAIKTARLKNPN-LPGLDNYLSSYMVHKVAVQTKSWYLVLGIKDH----KAGEDEIRQSYEGLAQLFH-PDECSSVAAETANLLINEAWEVLSNTKRRQAYDILMGYDNYNNSN 151
BLAST of Cmt030980.1 vs. ExPASy TrEMBL
Match: A0A2H5P8Q0|A0A2H5P8Q0_CITUN (J domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_114050 PE=4 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.456e-27 Identity = 65/150 (43.33%), Postives = 92/150 (61.33%), Query Frame = 0 Query: 1 MASPLAYKDAADGIAKEYLIDKDTEACRDTL------RAIVAVLHDTNKNKNLNPNDIPGFGRYTVSYLVHRLASETKSWYGVLGLKEGHGGGTAGVEEIKKHYEVLSTLFQQPNMCSFVEAKNENKLVTEAWEVLSDARRKEAYDLLMG 144 M PL AA+ + + LI+ + EACRD + I A L+ + NPN +PG Y SY+VH++A +TKSWY VLG+K+ AG +EI++ YE L+ LF P+ CS V A+ N L+ EAWEVLS+ +R++AYD+LMG Sbjct: 1 MPPPLCNPVAAEALFPK-LINMEAEACRDMAEELFINKNIDAALYAIKTARLKNPN-LPGLDNYLSSYMVHKVAVQTKSWYLVLGIKDH----KAGEDEIRQSYEGLAQLFH-PDECSSVAAETANLLINEAWEVLSNTKRRQAYDILMG 143
BLAST of Cmt030980.1 vs. ExPASy TrEMBL
Match: V4RNT7|V4RNT7_CITCL (J domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10029403mg PE=4 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.102e-24 Identity = 63/150 (42.00%), Postives = 91/150 (60.67%), Query Frame = 0 Query: 1 MASPLAYKDAADGIAKEYLIDKDTEACRDTL------RAIVAVLHDTNKNKNLNPNDIPGFGRYTVSYLVHRLASETKSWYGVLGLKEGHGGGTAGVEEIKKHYEVLSTLFQQPNMCSFVEAKNENKLVTEAWEVLSDARRKEAYDLLMG 144 M PL AA+ + + LI+ + EACRD + I A L+ + NPN + G Y SY+VH++A +TKSWY VLG+K+ AG +EI++ YE L+ LF+ P+ CS V A+ N L+ EAWEVLS+ +R++AY +LMG Sbjct: 1 MPPPLCNPVAAEALFPK-LINMEAEACRDMAEELFINKNIDAALYAIKTARLKNPN-LQGLDNYLSSYMVHKVAVQTKSWYLVLGIKDH----KAGEDEIRQSYEGLAQLFR-PDECSSVAAETANLLINEAWEVLSNTKRRQAYHILMG 143
BLAST of Cmt030980.1 vs. ExPASy TrEMBL
Match: A0A067DHZ7|A0A067DHZ7_CITSI (J domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g037661mg PE=4 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.173e-23 Identity = 60/133 (45.11%), Postives = 79/133 (59.40%), Query Frame = 0 Query: 19 LIDKDTEACRDTLRA------IVAVLHDTNKNKNLNPNDIPGFGRYTVSYLVHRLASETKSWYGVLGLKEGHGGGTAGVEEIKKHYEVLSTLFQQPNMCSFVEAKNENKLVTEAWEVLSDARRKEAYDLLMGF 145 L DK+ EA + I + L ++ + NPN G + Y+VH+LA+E KSWY VLG+++ AGV+ IKK YE L LF+ P+ CS V A NKL+ EAWEVLSD +R+EAYDLLM F Sbjct: 34 LADKEAEASKHMAEELFKEEKIDSALCVVDRARMKNPNH-QGLNSHFACYVVHKLAAEKKSWYAVLGIRDHR----AGVDVIKKRYEALVQLFK-PDRCSSVGADTANKLINEAWEVLSDPKRREAYDLLMCF 160
BLAST of Cmt030980.1 vs. ExPASy TrEMBL
Match: V4U9S9|V4U9S9_CITCL (J domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10029096mg PE=4 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.536e-23 Identity = 60/133 (45.11%), Postives = 79/133 (59.40%), Query Frame = 0 Query: 19 LIDKDTEACRDTLRA------IVAVLHDTNKNKNLNPNDIPGFGRYTVSYLVHRLASETKSWYGVLGLKEGHGGGTAGVEEIKKHYEVLSTLFQQPNMCSFVEAKNENKLVTEAWEVLSDARRKEAYDLLMGF 145 L DK+ EA + I + L ++ + NPN G + Y+VH+LA+E KSWY VLG+++ AGV+ IKK YE L LF+ P+ CS V A NKL+ EAWEVLSD +R+EAYDLLM F Sbjct: 34 LADKEAEASKHMAEELFKEEKIDSALCVVDRARMKNPNH-QGLNSHFACYVVHKLAAEKKSWYAVLGIRDHR----AGVDVIKKRYEALVQLFK-PDRCSSVGADTANKLINEAWEVLSDPKRREAYDLLMCF 160
BLAST of Cmt030980.1 vs. ExPASy TrEMBL
Match: A0A2H5P8Q9|A0A2H5P8Q9_CITUN (J domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_114090 PE=4 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.481e-23 Identity = 60/133 (45.11%), Postives = 80/133 (60.15%), Query Frame = 0 Query: 19 LIDKDTEACRDTLRA------IVAVLHDTNKNKNLNPNDIPGFGRYTVSYLVHRLASETKSWYGVLGLKEGHGGGTAGVEEIKKHYEVLSTLFQQPNMCSFVEAKNENKLVTEAWEVLSDARRKEAYDLLMGF 145 L DK+ EA + I + L ++ + NPN G + Y+VH+LA+E KSWY VLG+++ AGV+ IKK YE L LF+ P+ S V A NKL+ EAWEVLSD++R+EAYDLLMGF Sbjct: 32 LADKEAEASKHMAEELFKEEKIDSALCVVDRARMKNPNH-QGLNSHFACYVVHKLAAEKKSWYAVLGIRDHR----AGVDVIKKRYEALVQLFK-PDRFSSVGADTANKLINEAWEVLSDSKRREAYDLLMGF 158
BLAST of Cmt030980.1 vs. ExPASy TrEMBL
Match: A0A5C7IFV7|A0A5C7IFV7_9ROSI (J domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_003122 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.345e-10 Identity = 35/93 (37.63%), Postives = 56/93 (60.22%), Query Frame = 0 Query: 48 NPNDIPGFGRYTVSYLVHRLASETKSWYGVLGLKEGHGGGTAGVEEIKKHYEVLSTLFQQPNMCSFVEAKNENKLVTEAWEVLSDARRKEAYD 140 NP I + Y +Y+VH++AS+ +WY VLG+++ TAG+++IKK Y L++ + C V ++ +LV AW VLS + +EAYD Sbjct: 60 NPKRIQTYRPYFKAYVVHKIASKVNNWYAVLGIQD----LTAGIDDIKKQYNHLASALRS---CPSVAVESALRLVNVAWAVLSQPKLREAYD 145
BLAST of Cmt030980.1 vs. ExPASy TrEMBL
Match: A0A314YQA7|A0A314YQA7_PRUYE (J domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_23271 PE=4 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.024e-9 Identity = 41/111 (36.94%), Postives = 53/111 (47.75%), Query Frame = 0 Query: 30 TLRAIVAVLHDTNKNKNLNPNDIPGFGRYTVSYLVHRLASETKSWYGVLGLKEGHGGGTAGVEEIKKHYEVLSTLFQQPNMCSFVEAKNENKLVTEAWEVLSDARRKEAYD 140 TLR + K L P D PG Y +Y +H S K+WY VLG+ A E IKK Y+ L+ L P+ + A K V AW+VLSD ++EAYD Sbjct: 53 TLRHFDCAIMQARAPKELYP-DFPGMDNYMAAYQIHSAVSHKKNWYHVLGIPN---PAVADSEAIKKQYKRLA-LALHPDKNGSIAADGAFKYVKAAWDVLSDREKREAYD 158 The following BLAST results are available for this feature:
BLAST of Cmt030980.1 vs. ExPASy TrEMBL
Analysis Date: 2024-02-08 (Blastp of Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Cmt030980.1 vs. ExPASy TrEMBL
Analysis Date: 2024-02-08 (Blastp of Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Cmt030980.1 vs. ExPASy TrEMBL
Analysis Date: 2024-02-08 (Blastp of Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) v1.0 proteins vs Araport11) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) v1.0 proteins
Date Performed: 2024-02-08 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Cmt030980.1-HZY-T_v1 ID=Cmt030980.1-HZY-T_v1; Name=Cmt030980.1; organism=Citrus maxima; type=mRNA; length=624bpback to top protein sequence of Cmt030980.1-HZY-T_v1 >Cmt030980.1-HZY-T_v1 ID=Cmt030980.1-HZY-T_v1; Name=Cmt030980.1-HZY-T_v1; organism=Citrus maxima; type=polypeptide; length=208bpback to top mRNA from alignment at chr8:2428383..2429006- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=624bp; location=Sequence derived from: chr8:2428383..2429006- (Citrus maximaback to top Coding sequence (CDS) from alignment at chr8:2428383..2429006- >Cmt030980.1-HZY-T_v1 ID=Cmt030980.1-HZY-T_v1; Name=Cmt030980.1; organism=Citrus maxima; type=CDS; length=624bp; location=Sequence derived from: chr8:2428383..2429006- (Citrus maximaback to top |