Cmt252300.2 | Citrus Genome Database

Transcript Overview


Name	Cmt252300.2
Unique Name	Cmt252300.2-HZY-T_v1
Type	mRNA
Organism	Citrus maxima (Pomelo, pummelo)
Sequence length	978

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) genome v1.0	2024-01-31
InterProScan Analysis for Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) v1.0 proteins	2024-02-08
Blastp of Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) v1.0 proteins vs UniProt TrEMBL	2024-02-08
Blastp of Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) v1.0 proteins vs UniProt Swissprot	2024-02-08
Blastp of Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) v1.0 proteins vs Araport11	2024-02-08

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
cmhmpjR015	Murraya paniculata cv. JLX genome v1.0	Murraya paniculata
cmhmpjR031	Murraya paniculata cv. JLX genome v1.0	Murraya paniculata
cmhmpjR067	Murraya paniculata cv. JLX genome v1.0	Murraya paniculata
caucmhL007	Citrus australis genome v1.0 (UQ)	Citrus australis
cccmhL092	Citrus clementina genome v1.0 (JGI)	Citrus clementina
caucmhL078	Citrus australis genome v1.0 (UQ)	Citrus australis
cccmhL163	Citrus clementina genome v1.0 (JGI)	Citrus clementina
cccmhL201	Citrus clementina genome v1.0 (JGI)	Citrus clementina
ccrcmhL187	Citrus australasica CRC3672 genome v1	Citrus australasica
caucmhL286	Citrus australis genome v1.0 (UQ)	Citrus australis
ccrcmhL255	Citrus australasica CRC3672 genome v1	Citrus australasica
ccrcmhL292	Citrus australasica CRC3672 genome v1	Citrus australasica
ccrcmhL520	Citrus australasica CRC3672 genome v1	Citrus australasica
cmhcmhR017	Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) genome v1.0	Citrus maxima
ccrcmhL580	Citrus australasica CRC3672 genome v1	Citrus australasica
cmhcmhR031	Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) genome v1.0	Citrus maxima
cmcmhL000	Citrus maxima (C. grandis) genome v1.0	Citrus maxima
ccrcmhL621	Citrus australasica CRC3672 genome v1	Citrus australasica
clecmhL000	Citrus limon cv. Eureka genome v1.0	Citrus limon
cmhcmjR016	Citrus maxima Cupi Majiayou v1.0 genome	Citrus maxima
cmhcmjR053	Citrus maxima Cupi Majiayou v1.0 genome	Citrus maxima
cmhcmjR063	Citrus maxima Cupi Majiayou v1.0 genome	Citrus maxima
cmhcsR020	Citrus sinensis genome v1.1 (JGI)	Citrus sinensis
cmhcsR068	Citrus sinensis genome v1.1 (JGI)	Citrus sinensis
cmhcsR072	Citrus sinensis genome v1.1 (JGI)	Citrus sinensis
cmhdvaR012	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
cmcmhL391	Citrus maxima (C. grandis) genome v1.0	Citrus maxima
clecmhL263	Citrus limon cv. Eureka genome v1.0	Citrus limon
clecmhL306	Citrus limon cv. Eureka genome v1.0	Citrus limon
clecmhL414	Citrus limon cv. Eureka genome v1.0	Citrus limon
cmhdvbR008	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis
cmhfhsR000	Fortunella hindsii S3y-45 genome v2.0	Fortunella hindsii
cmhfhsR035	Fortunella hindsii S3y-45 genome v2.0	Fortunella hindsii
cmhfhsR053	Fortunella hindsii S3y-45 genome v2.0	Fortunella hindsii
clecmhL567	Citrus limon cv. Eureka genome v1.0	Citrus limon
cmhswoR006	Citrus sinensis Di-Haploid Sweet Orange (DHSO) v3.0 (HZAU)	Citrus sinensis
cmhzkR039	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata
cmhzkR062	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata
cmhzkR077	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata

Orthologs


Gene/Transcript	Assembly	Species
gene-KPL70_019750-mRNA1	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Cmt252300	Cmt252300-HZY-T_v1	Citrus maxima	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cmt252300.2.exon5	Cmt252300.2.exon5-HZY-T_v1	Citrus maxima	exon
Cmt252300.2.exon4	Cmt252300.2.exon4-HZY-T_v1	Citrus maxima	exon
Cmt252300.2.exon3	Cmt252300.2.exon3-HZY-T_v1	Citrus maxima	exon
Cmt252300.2.exon2	Cmt252300.2.exon2-HZY-T_v1	Citrus maxima	exon
Cmt252300.2.exon1	Cmt252300.2.exon1-HZY-T_v1	Citrus maxima	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cmt252300.2.utr3.1	Cmt252300.2.utr3.1-HZY-T_v1	Citrus maxima	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cmt252300.2.cds.5	Cmt252300.2.cds.5-HZY-T_v1	Citrus maxima	CDS
Cmt252300.2.cds.4	Cmt252300.2.cds.4-HZY-T_v1	Citrus maxima	CDS
Cmt252300.2.cds.3	Cmt252300.2.cds.3-HZY-T_v1	Citrus maxima	CDS
Cmt252300.2.cds.2	Cmt252300.2.cds.2-HZY-T_v1	Citrus maxima	CDS
Cmt252300.2.cds.1	Cmt252300.2.cds.1-HZY-T_v1	Citrus maxima	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cmt252300.2.utr5.1	Cmt252300.2.utr5.1-HZY-T_v1	Citrus maxima	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Cmt252300.2-HZY-T_v1	Cmt252300.2-HZY-T_v1	Citrus maxima	polypeptide
Cmt252300.2-HZY-T_v1	Cmt252300.2-HZY-T_v1-protein	Citrus maxima	polypeptide

Homology

[Close]

BLAST of Cmt252300.2 vs. ExPASy TrEMBL
Match: V4RWH0|V4RWH0_CITCL (BHLH domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10025735mg PE=4 SV=1)

HSP 1 Score: 638.262 bits (1645), Expect = 0.000e+0
Identity = 316/325 (97.23%), Postives = 320/325 (98.46%), Query Frame = 0

Query:    1 MEQDHVYQYNNNVNIYSTASSSSVHNTHVPPSSSDEISMFLHQILYRSSSSSSTTITATTSSPNVTHGVPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGTLVSQETSTLNVFNLPNQHISSNQLQLPSTSNVINSETEFGLDASIQANFGPFQHGTASGVRVKEPLL 325
            MEQDHVYQYNNNVNIYSTASSSSVHNTHVPPSSSD+ISMFLHQILYRSSSSSSTTITATTSSPNVTH VPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGTLVSQETSTLNVFNLPNQHISSNQLQLPSTSN+INSETEFGLDASIQANFGPFQHGTASG   +E +L
Sbjct:    1 MEQDHVYQYNNNVNIYSTASSSSVHNTHVPPSSSDDISMFLHQILYRSSSSSSTTITATTSSPNVTHVVPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGTLVSQETSTLNVFNLPNQHISSNQLQLPSTSNIINSETEFGLDASIQANFGPFQHGTASGETSREDML 325

[Close]

BLAST of Cmt252300.2 vs. ExPASy TrEMBL
Match: A0A067GHM3|A0A067GHM3_CITSI (BHLH domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g036669mg PE=4 SV=1)

HSP 1 Score: 637.491 bits (1643), Expect = 0.000e+0
Identity = 315/317 (99.37%), Postives = 316/317 (99.68%), Query Frame = 0

Query:    1 MEQDHVYQYNNNVNIYSTASSSSVHNTHVPPSSSDEISMFLHQILYRSSSSSSTTITATTSSPNVTHGVPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGTLVSQETSTLNVFNLPNQHISSNQLQLPSTSNVINSETEFGLDASIQANFGPFQHGTASG 317
            MEQDHVYQYNNNVNIYSTASSSSVHNTHVPPSSSDEISMFLHQILYRSSSSSSTTITATTSSPNVTH VPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGTLVSQETSTLNVFNLPNQHISSNQLQLPSTSN+INSETEFGLDASIQANFGPFQHGTASG
Sbjct:    1 MEQDHVYQYNNNVNIYSTASSSSVHNTHVPPSSSDEISMFLHQILYRSSSSSSTTITATTSSPNVTHVVPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGTLVSQETSTLNVFNLPNQHISSNQLQLPSTSNIINSETEFGLDASIQANFGPFQHGTASG 317

[Close]

BLAST of Cmt252300.2 vs. ExPASy TrEMBL
Match: A0A2H5PJ36|A0A2H5PJ36_CITUN (BHLH domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_141210 PE=4 SV=1)

HSP 1 Score: 632.098 bits (1629), Expect = 0.000e+0
Identity = 316/326 (96.93%), Postives = 319/326 (97.85%), Query Frame = 0

Query:    1 MEQDHVYQYNNNVNIYSTASSSSVHNTHVPPSSSDEISMFLHQILYRSSSSSSTTITATTSSPNVTHGVPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEK-RRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGTLVSQETSTLNVFNLPNQHISSNQLQLPSTSNVINSETEFGLDASIQANFGPFQHGTASGVRVKEPLL 325
            MEQDHVYQYNNNVNIYSTASSSSVHNTHVPPSSSDEISMFLHQILYRSSSSSSTT+TATTSSPNVTH VPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEK RRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGTLVSQETSTLNVFNLPNQHISSNQLQLPSTSNV NSETEFGLDASIQANFGPFQHGTASG   +E +L
Sbjct:    1 MEQDHVYQYNNNVNIYSTASSSSVHNTHVPPSSSDEISMFLHQILYRSSSSSSTTVTATTSSPNVTHVVPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKQRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGTLVSQETSTLNVFNLPNQHISSNQLQLPSTSNVTNSETEFGLDASIQANFGPFQHGTASGETSREDML 326

[Close]

BLAST of Cmt252300.2 vs. ExPASy TrEMBL
Match: A0A6P4ALW8|A0A6P4ALW8_ZIZJJ (Transcription factor SPATULA isoform X1 OS=Ziziphus jujuba OX=326968 GN=LOC107424512 PE=4 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.266e-103
Identity = 188/338 (55.62%), Postives = 233/338 (68.93%), Query Frame = 0

Query:    6 VYQYNNNVNIYSTASSSSVHNTHVPPSSSDEISMFLHQILYRSSSSSSTTITATT--------------SSPN------VTHGVPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGTL-VSQETSTLNVFNLPNQHISSNQLQLPSTSNVINSETEFGLDASIQANFGPFQHGTASGVRVKE 322
            VY+Y+ N    + +SS+SV  T   P   DEIS+FL QIL RS+SSSS++  ++T              SSP+       +HG+P  +           GISA+D        G   SGN   +  NVSSSS+G SENEN D++DC+SEEG++A V+EV  KPV  RSSSKRSRAAEVHNLSEKRRRSRINEKMKALQ+LIPNSNKTDKASMLDEAIEYLK LQLQVQ+L+MRNG+SLHPMC+PG LPPIQL   RM FG GN SLH+N +GTL + QETST N+F L NQ  + NQ  +P+ S++I SE+ FG++ SIQA+ GPFQ  T++    K+
Sbjct:    4 VYEYDKN----ACSSSASVAQTVAAP---DEISLFLQQILVRSASSSSSSSDSSTLVAAQAGMRAQFSLSSPSSIMGFCTSHGLPDNMHRQCRPQFLGEGISAID------SSGAYFSGNASANAPNVSSSSLGASENEN-DDYDCESEEGLEALVEEVPTKPV-ARSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCVPGALPPIQLSQTRMDFGEGNRSLHLNMSGTLPMDQETSTQNLFGLSNQCSAPNQTFVPNMSSIIGSESSFGIEPSIQAHLGPFQLHTSAEEICKD 326

[Close]

BLAST of Cmt252300.2 vs. ExPASy TrEMBL
Match: A0A6P4A3S8|A0A6P4A3S8_ZIZJJ (Transcription factor SPATULA isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC107424512 PE=4 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 1.633e-103
Identity = 188/338 (55.62%), Postives = 233/338 (68.93%), Query Frame = 0

Query:    6 VYQYNNNVNIYSTASSSSVHNTHVPPSSSDEISMFLHQILYRSSSSSSTTITATT--------------SSPN------VTHGVPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGTL-VSQETSTLNVFNLPNQHISSNQLQLPSTSNVINSETEFGLDASIQANFGPFQHGTASGVRVKE 322
            VY+Y+ N    + +SS+SV  T   P   DEIS+FL QIL RS+SSSS++  ++T              SSP+       +HG+P  +           GISA+D        G   SGN   +  NVSSSS+G SENEN D++DC+SEEG++A V+EV  KPV  RSSSKRSRAAEVHNLSEKRRRSRINEKMKALQ+LIPNSNKTDKASMLDEAIEYLK LQLQVQ+L+MRNG+SLHPMC+PG LPPIQL   RM FG GN SLH+N +GTL + QETST N+F L NQ  + NQ  +P+ S++I SE+ FG++ SIQA+ GPFQ  T++    K+
Sbjct:    4 VYEYDKN----ACSSSASVAQTVAAP---DEISLFLQQILVRSASSSSSSSDSSTLVAAQAGMRAQFSLSSPSSIMGFCTSHGLPDNMHRQCRPQFLGEGISAID------SSGAYFSGNASANAPNVSSSSLGASENEN-DDYDCESEEGLEALVEEVPTKPV-ARSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCVPGALPPIQLSQTRMDFGEGNRSLHLNMSGTLPMDQETSTQNLFGLSNQCSAPNQTFVPNMSSIIGSESSFGIEPSIQAHLGPFQLHTSAEEICKD 326

[Close]

BLAST of Cmt252300.2 vs. ExPASy TrEMBL
Match: A0A978UYY2|A0A978UYY2_ZIZJJ (BHLH domain-containing protein OS=Ziziphus jujuba var. spinosa OX=714518 GN=FEM48_Zijuj08G0118800 PE=4 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 3.019e-101
Identity = 186/332 (56.02%), Postives = 230/332 (69.28%), Query Frame = 0

Query:    6 VYQYNNNVNIYSTASSSSVHNTHVPPSSSDEISMFLHQILYRSSSSSSTTITATT--------------SSPN------VTHGVPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGTL-VSQETSTLNVFNLPNQHISSNQLQLPSTSNVINSETEFGLDASIQANFGPFQHGTAS 316
            VY+Y+ N    + +SS+SV  T   P   DEIS+FL QIL RS+SSSS++  ++T              SSP+       +HG+P  +           GISA+D        G    GN   +  NVSSSS+G SENEN D++DC+SEEG++A V+EV  KPV  RSSSKRSRAAEVHNLSEKRRRSRINEKMKALQ+LIPNSNKTDKASMLDEAIEYLK LQLQVQ+L+MRNG+SLHPMC+PG LPPIQL   RM FG GN SLH+N +GTL + QETST N+F L NQ  + NQ  +P+ S++I SE+ FG++ SIQA+ GPFQ  T++
Sbjct:   62 VYEYDKN----ACSSSASVAQTVAAP---DEISLFLQQILVRSASSSSSSSDSSTLVAAQAGMRAQFSLSSPSSIMGFCTSHGLPDNMHRQCRPQFLGEGISAID------SSGAYFLGNASANAPNVSSSSLGASENEN-DDYDCESEEGLEALVEEVPTKPV-ARSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCVPGALPPIQLSQTRMDFGEGNRSLHLNMSGTLPMDQETSTQNLFGLSNQCSAPNQTFVPNMSSIIGSESSFGIEPSIQAHLGPFQLHTSA 378

[Close]

BLAST of Cmt252300.2 vs. ExPASy TrEMBL
Match: A0A5C7HQT4|A0A5C7HQT4_9ROSI (BHLH domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_013986 PE=4 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 1.183e-98
Identity = 193/339 (56.93%), Postives = 228/339 (67.26%), Query Frame = 0

Query:    4 DHVYQYNNNVNIYSTASSSSVHNTHVPPSSSDEISMFLHQILYRSSSSSSTTI-----TATTSSPNVTHGVPHP---------VEISAHRLSKSSGISAVDLVN--TSVGVGGSLSGNVMVS-GANVSSSSVGLS--ENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGTL-VSQETSTLNVFNLPNQHISSNQLQLPSTSNVINSETEFGLDASIQANFGPFQHGTASGVRVKE 322
            D VY Y++N         SS  + ++PPSSSDEIS+ L+QIL RSSSSSS        TAT +S    H   H           + S   L KS  ISAVD +N   S   G  LSGNV VS GAN+ SSS  +   ENE  +EHDC+SEEG +A VDE    P +  + +KRSRAAEVHNLSEKRRRSRINEKMKALQ+LIPNSNKTDKASMLDEAIEYLK LQLQVQ+LTM+NG+SLH MCLPG L P Q   M+MGFG  NGSLH N+TGTL V+QE  T ++ +LP Q  ++NQLQ+   SN INSET FGLD+SIQA  GPF   T+S V + +
Sbjct:    3 DQVYDYDSN---------SSFLHCNIPPSSSDEISLLLNQILCRSSSSSSPPPPPPPKTATANSSVFAHMGLHSSSSPPQQQLADGSQGPLYKSRRISAVDSLNNVCSAAGGAFLSGNVRVSTGANIVSSSSVVGVSENETNEEHDCESEEGTEAQVDE---GPTKAANRTKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMKNGLSLHHMCLPGALQPFQFSQMKMGFGGENGSLHTNTTGTLAVNQEDLTQSLLSLPGQCTATNQLQV---SNTINSETSFGLDSSIQAQLGPFLLRTSSEVSLND 326

[Close]

BLAST of Cmt252300.2 vs. ExPASy TrEMBL
Match: A0A1Q3BI94|A0A1Q3BI94_CEPFO (HLH domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_11250 PE=4 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 1.875e-98
Identity = 186/329 (56.53%), Postives = 225/329 (68.39%), Query Frame = 0

Query:    1 MEQDHVYQYNNNVNIYSTASSSSVHNTHVP-PSSSDEISMFLHQILYRSSSSSSTTITATTSSPNVTHGVPHPVEISAHR-LSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQL-PHMRMGFGVGNGSLHMNSTGTL-VSQETSTLNVFNLPNQHISSNQLQLPSTSNVINSETEFGLDASIQANFGPFQHGTASGVRVKEPLL 325
            M  +H+  Y   +N  S++SS+SV++ H   PSSSDEIS+FL QIL RSSSSS           +     P   + S+    +K + ISAV+        G  L+GNV  S A         SENE TDE+DC+SEEG +A VDE TAKP   R+ SKRSRAAEVHNLSEKRRRSRINEKMKALQ+LIPNSNK DKASMLDEAIEYLK LQLQVQ+L+MRNG+SLHPMCLPG+L PIQL  HM MG G  NGSLH+N TGTL  +QET    VFNLPNQ  +S+QL +P+ SN+INSET  G++ SI ++FG FQ  T+S    +E + 
Sbjct:    1 MGDNHINHY---INACSSSSSASVYHQHNQLPSSSDEISLFLRQILVRSSSSSPAAGGPQQGQ-SCKLTTPESEQWSSRSPCAKDAMISAVE------SSGAYLAGNVRGSAA---------SENE-TDEYDCESEEGFEALVDEATAKPAPQRNLSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKADKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCLPGVLQPIQLSSHMSMGLGEDNGSLHINRTGTLPTNQETLERTVFNLPNQCSASDQLPIPNVSNIINSETSLGMEPSINSHFGSFQLHTSSKEICREDIW 309

[Close]

BLAST of Cmt252300.2 vs. ExPASy TrEMBL
Match: A0A8K0E3A3|A0A8K0E3A3_9ROSA (BHLH domain-containing protein OS=Rhamnella rubrinervis OX=2594499 GN=FNV43_RR17249 PE=4 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 1.193e-97
Identity = 180/325 (55.38%), Postives = 222/325 (68.31%), Query Frame = 0

Query:   12 NVNIYSTASSSSVHNTHVPPSSSDEISMFLHQILYRSSSSSSTTITA----------TTSSPNVTHGV-----PHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGTL-VSQETSTLNVFNLPNQHISSNQLQLPSTSNVINSETEFGLDASIQANFGPFQ-HGTASGVR 319
            +++ Y   + SS  +   P ++ DE S+FL QIL RSSSSS ++ +           + SSP++         P  ++          GISAVD        G  L GN   +  NVSSSS+G SENEN DE+DC+SEEG++A V+EV  KPV  RSSSKRSRAAEVHNLSEKRRRSRINEKMKALQ+LIPNSNKTDKASMLDEAIEYLK LQLQVQ+L+MRNG+SLHPMC+PG L P QL  MRM F  GN SLH+N    L ++QETST N+F LPNQ  +SNQ  +P+ SN+I+SET FGL+ S+QA  G +Q H +A G+R
Sbjct:    3 DMDEYDKNACSSSASVAQPATAPDEFSLFLQQILVRSSSSSGSSTSVAGHAGMREQFSLSSPSIMGFCTSNISPDNLQRQCRLQLLGEGISAVD------SSGPYLLGNASRNATNVSSSSLGGSENEN-DEYDCESEEGLEALVEEVPTKPV-ARSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCVPGGLQPAQLSQMRMDFSEGNRSLHLNMPANLPMNQETSTQNLFGLPNQCTASNQALVPNMSNIISSETSFGLEPSMQARLGSYQLHTSAEGIR 319

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BLAST of Cmt252300.2 vs. ExPASy TrEMBL
Match: A0A833XBW4|A0A833XBW4_JUGRE (BHLH domain-containing protein OS=Juglans regia OX=51240 GN=F2P56_013911 PE=4 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 4.883e-96
Identity = 184/324 (56.79%), Postives = 224/324 (69.14%), Query Frame = 0

Query:    6 VYQYNNNVNIYSTASSSSVHNTHV-PPSSS-----DEISMFLHQILYRSSSS-----SSTTITATTSSPNVTHGVPHPVEISAHRLSKSS----GISAVDLVNT-SVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGSLHMNSTGT-LVSQETSTLNVFNLPNQHISSNQL-QLPSTSNVINSETEFGLDASIQANFGPFQ 311
            +Y Y+ N    S +SS+S    H+ PPSSS     DEIS+FLHQIL RSSSS     S+T   A     +V  G P         L +S+    GISAV+  +  S G G  LS        N+S+SS+G SENE TDE+DC+SEEG++A V++V+ KP+ PRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQ+LIPNSNKTDKASMLDEAIEYLK LQLQVQ+L+MRNG SLHPMCLPG L PIQ   MRM FG     LH+N+ G   +++ET   ++F LPNQ I SNQ    P+ SN+INS+T FGL++ +QA+ GPFQ
Sbjct:    4 MYAYDKN----SRSSSASAPQPHLLPPSSSHAGAPDEISLFLHQILLRSSSSSSPFVSNTGKQAQLCDSDVLPGNPD------RSLCRSALVQDGISAVESSSAMSTGSGVFLS--------NLSTSSLGASENE-TDEYDCESEEGLEALVEDVSEKPIPPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGFSLHPMCLPGALQPIQFSQMRMDFGEEYRPLHLNTAGIHSLNKETPLHDMFTLPNQRIVSNQPSSAPNMSNIINSQTSFGLESPVQAHLGPFQ 308

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BLAST of Cmt252300.2 vs. ExPASy Swiss-Prot
Match: SPT_ARATH (Transcription factor SPATULA OS=Arabidopsis thaliana OX=3702 GN=SPT PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.487e-52
Identity = 141/318 (44.34%), Postives = 173/318 (54.40%), Query Frame = 0

Query:   25 HNTHVPPSSSDEISMFLHQILYRSS---SSSSTTITATTSSPNVTHGVPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSV--------------------------GLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKR--SRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPG-ILPPIQLPHMRMGFGVGNGSLHMNSTGTLVSQETSTLNVFNLPNQHISSNQLQLPSTSNVINSETEFGLDASIQANFGPF 310
            H+ H PPSSSDEIS FL  I  RSS   S  S   T TT+S    HG   P   ++  L      S   L++  VG        V++ G + S+++                           G S NE TDE+DC+SEEG +A VDE  +    P S S     RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLK LQLQVQ+LTMRNG++LHP+CLPG  L P+QL  +R                     E +   + N  NQ  S++    P   N + S   + L+ SI+++FGPF
Sbjct:   37 HHLHHPPSSSDEISQFLRHIFDRSSPLPSYYSPATTTTTASLIGVHGSGDPHADNSRSLVSHHPPSDSVLMSKRVGD----FSEVLIGGGSGSAAACFGFSGGGNNNNVQGNSSGTRVSSSSVGASGNE-TDEYDCESEEGGEAVVDEAPSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGINLHPLCLPGTTLHPLQLSQIR-------------------PPEATNDPLLNHTNQFASTS--NAPEMINTVAS--SYALEPSIRSHFGPF 326

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BLAST of Cmt252300.2 vs. ExPASy Swiss-Prot
Match: ALC_ARATH (Transcription factor ALC OS=Arabidopsis thaliana OX=3702 GN=ALC PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.816e-40
Identity = 98/213 (46.01%), Postives = 115/213 (53.99%), Query Frame = 0

Query:   22 SSVHNTHVPPSSSDEISMFLHQILYRSSSSSSTTITATTSSPNVTHGVPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPP 234
            S V +   PPSSSDE+S FL QIL R       T TA  SSP                  KS+ +S+ +    SV            SG  VSS   G+SE             G      E      + R+S KR+  A+ HNLSEK+RRS+INEKMKALQ LIPNSNKTDKASMLDEAIEYLK LQLQVQ L + NG+ L+PM LP + PP
Sbjct:    4 SDVGDRLPPPSSSDELSSFLRQILSR-------TPTAQPSSP-----------------PKSTNVSSAETFFPSV------------SGGAVSSVGYGVSET------------GQDKYAFEHKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMNGLGLNPMRLPQVPPP 168

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BLAST of Cmt252300.2 vs. ExPASy Swiss-Prot
Match: PIL15_ORYSJ (Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15 OS=Oryza sativa subsp. japonica OX=39947 GN=PIL15 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 5.170e-33
Identity = 93/215 (43.26%), Postives = 119/215 (55.35%), Query Frame = 0

Query:  111 ANVSSSSVGLSENENTDE------HDCQSEEGIQASVDE-VTAKPVRPRSS----SKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGIL-----PPI-QLPHMRMGFGVGNGSLHMNSTGTLVSQE-----------------------TSTLNVFNLPNQHISSNQLQLP 285
            A V++SSV       +DE        CQ++    AS D+ +  +P   R S    +KRSR AEVHNLSE+RRR RINEKM+ALQ LIPN NK DKASMLDEAIEYLK LQLQVQ+++M  G+ + PM LP  +     PP+   PH+ MG G G G   M++TG L                           TST+ +F +P Q I S+   +P
Sbjct:  325 ATVATSSVCSGNGAGSDELWRQQKRKCQAQAECSASQDDDLDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGTGLCIPPMLLPTAMQHLQIPPMAHFPHLGMGLGYGMGVFDMSNTGALQMPPMPGAHFPCPMIPGASPQGLGIPGTSTMPMFGVPGQTIPSSASSVP 539

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BLAST of Cmt252300.2 vs. ExPASy Swiss-Prot
Match: PIF3_ARATH (Transcription factor PIF3 OS=Arabidopsis thaliana OX=3702 GN=PIF3 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.104e-33
Identity = 80/147 (54.42%), Postives = 95/147 (64.63%), Query Frame = 0

Query:   91 LVNTSVGVGGSLSGNVMVSGANVSSSSVGLS---ENENTDEHDCQSEEGIQASVD-EVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHP--MCLPGI 231
            +V +SVG G SL G          S S  LS   ++ N  + DC SE+  + S D    A P R    SKRSR+AEVHNLSE+RRR RINEKM+ALQ LIPN NK DKASMLDEAIEYLK LQLQVQ+++M +G  L P  M  PG+
Sbjct:  280 VVCSSVGSGNSLDG---------PSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGM 417

[Close]

BLAST of Cmt252300.2 vs. ExPASy Swiss-Prot
Match: PIL13_ORYSJ (Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 OS=Oryza sativa subsp. japonica OX=39947 GN=PIL13 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.664e-31
Identity = 65/126 (51.59%), Postives = 85/126 (67.46%), Query Frame = 0

Query:  113 VSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPG---ILPPI 235
            + S S    + +  ++ D +SE+  +    E T    R   S +R+RAAEVHNLSE+RRR RINEKM+ALQ LIP+ NKTDKAS+LDEAIEYLK LQ+QVQ++ M  GM+  PM  PG    +PP+
Sbjct:  175 LPSESASAHKRKGREDSDSRSEDA-ECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGMA--PMMFPGAHQFMPPM 297

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BLAST of Cmt252300.2 vs. ExPASy Swiss-Prot
Match: PIF1_ARATH (Transcription factor PIF1 OS=Arabidopsis thaliana OX=3702 GN=PIF1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.342e-28
Identity = 75/164 (45.73%), Postives = 95/164 (57.93%), Query Frame = 0

Query:   88 AVDLVNTSVGVGGSLSGNVMVS-----GANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGV 246
            AV +   ++ + G+ S  V  S       NV        E   TDE + +SEE  QA V           +S+KRSRAAEVHNLSE++RR RINE+MKALQ LIP  NK+DKASMLDEAIEY+K LQLQ+Q+++M  GM               +PHM MG G+
Sbjct:  217 AVAMTAPAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVST---------TSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQY----MPHMAMGMGM 367

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BLAST of Cmt252300.2 vs. ExPASy Swiss-Prot
Match: APG_ORYSJ (Transcription factor APG OS=Oryza sativa subsp. japonica OX=39947 GN=APG PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.346e-27
Identity = 66/102 (64.71%), Postives = 74/102 (72.55%), Query Frame = 0

Query:  127 DEHDCQSEEGIQASVDEVTAKP----VRPRS---SSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGM 221
            D H+ QS E   AS DE+        V  RS   SSKRSR AEVHNLSE+RRR RINEKM+ALQ LIPN NK DKASML+EAIEYLK LQLQVQ+++M  GM
Sbjct:  297 DSHNNQSAE-WSASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSMGTGM 397

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BLAST of Cmt252300.2 vs. ExPASy Swiss-Prot
Match: BH023_ARATH (Transcription factor bHLH23 OS=Arabidopsis thaliana OX=3702 GN=BHLH23 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.301e-24
Identity = 57/124 (45.97%), Postives = 81/124 (65.32%), Query Frame = 0

Query:  121 SENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGF 244
            +E + TDE   ++ E  + +V+    +  R  +SSKRSRAA +H LSE+RRR +INE MKALQ L+P   KTD++SMLD+ IEY+K LQ Q+Q+ +M + M + PM   G +    +PHM MG 
Sbjct:  241 TETDITDERKRKTRE--ETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSMGHVM-IPPMMYAGNIQQQYMPHMAMGM 361

[Close]

BLAST of Cmt252300.2 vs. ExPASy Swiss-Prot
Match: PIF5_ARATH (Transcription factor PIF5 OS=Arabidopsis thaliana OX=3702 GN=PIF5 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.019e-23
Identity = 59/107 (55.14%), Postives = 79/107 (73.83%), Query Frame = 0

Query:  132 QSEEGIQASVDEVTAKPVRPRS-SSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLH------PMCLPGI 231
            QS+ G+ ++ D+        RS S++RSRAAEVHNLSE+RRR RINE+MKALQ LIP+ ++TDKAS+LDEAI+YLK LQ+Q+QV+ M +GM+        PM  PG+
Sbjct:  228 QSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMFPGV 334

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BLAST of Cmt252300.2 vs. ExPASy Swiss-Prot
Match: PIL1_ARATH (Transcription factor PIL1 OS=Arabidopsis thaliana OX=3702 GN=PIL1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.215e-23
Identity = 61/148 (41.22%), Postives = 84/148 (56.76%), Query Frame = 0

Query:  117 SVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLP---HMRMGFGVGNGSLHMNSTGTLVS 261
            S  LS N + +  D +++      V   T KPV     +KR R+ EVH L E++RR   N+KM+ALQ L+PN  K DKAS+LDEAI+Y++ LQLQVQ+++M NG+         I PP  LP   +  MG G     +HM +  T  S
Sbjct:  198 STYLSNNSDDESDDAKTQ------VHARTRKPV-----TKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSMGNGL---------IRPPTMLPMGHYSPMGLG-----MHMGAAATPTS 320

[Close]

BLAST of Cmt252300.2 vs. Araport11
Match: | (Symbols: SPT | SPATULA | chr4:17414167-17415945 FORWARD LENGTH=373)

HSP 1 Score: 179.489 bits (454), Expect = 2.584e-53
Identity = 141/318 (44.34%), Postives = 173/318 (54.40%), Query Frame = 0

Query:   25 HNTHVPPSSSDEISMFLHQILYRSS---SSSSTTITATTSSPNVTHGVPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSV--------------------------GLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKR--SRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPG-ILPPIQLPHMRMGFGVGNGSLHMNSTGTLVSQETSTLNVFNLPNQHISSNQLQLPSTSNVINSETEFGLDASIQANFGPF 310
            H+ H PPSSSDEIS FL  I  RSS   S  S   T TT+S    HG   P   ++  L      S   L++  VG        V++ G + S+++                           G S NE TDE+DC+SEEG +A VDE  +    P S S     RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLK LQLQVQ+LTMRNG++LHP+CLPG  L P+QL  +R                     E +   + N  NQ  S++    P   N + S   + L+ SI+++FGPF
Sbjct:   37 HHLHHPPSSSDEISQFLRHIFDRSSPLPSYYSPATTTTTASLIGVHGSGDPHADNSRSLVSHHPPSDSVLMSKRVGD----FSEVLIGGGSGSAAACFGFSGGGNNNNVQGNSSGTRVSSSSVGASGNE-TDEYDCESEEGGEAVVDEAPSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGINLHPLCLPGTTLHPLQLSQIR-------------------PPEATNDPLLNHTNQFASTS--NAPEMINTVAS--SYALEPSIRSHFGPF 326

[Close]

BLAST of Cmt252300.2 vs. Araport11
Match: | (Symbols: ALC | ALCATRAZ | chr5:26785332-26786338 REVERSE LENGTH=210)

HSP 1 Score: 144.05 bits (362), Expect = 1.894e-41
Identity = 98/213 (46.01%), Postives = 115/213 (53.99%), Query Frame = 0

Query:   22 SSVHNTHVPPSSSDEISMFLHQILYRSSSSSSTTITATTSSPNVTHGVPHPVEISAHRLSKSSGISAVDLVNTSVGVGGSLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPP 234
            S V +   PPSSSDE+S FL QIL R       T TA  SSP                  KS+ +S+ +    SV            SG  VSS   G+SE             G      E      + R+S KR+  A+ HNLSEK+RRS+INEKMKALQ LIPNSNKTDKASMLDEAIEYLK LQLQVQ L + NG+ L+PM LP + PP
Sbjct:    4 SDVGDRLPPPSSSDELSSFLRQILSR-------TPTAQPSSP-----------------PKSTNVSSAETFFPSV------------SGGAVSSVGYGVSET------------GQDKYAFEHKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMNGLGLNPMRLPQVPPP 168

[Close]

BLAST of Cmt252300.2 vs. Araport11
Match: | (Symbols: PIF3, PAP3, POC1 | PHYTOCHROME-ASSOCIATED PROTEIN 3, PHOTOCURRENT 1, phytochrome interacting factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524)

HSP 1 Score: 130.954 bits (328), Expect = 6.248e-34
Identity = 80/147 (54.42%), Postives = 95/147 (64.63%), Query Frame = 0

Query:   91 LVNTSVGVGGSLSGNVMVSGANVSSSSVGLS---ENENTDEHDCQSEEGIQASVD-EVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHP--MCLPGI 231
            +V +SVG G SL G          S S  LS   ++ N  + DC SE+  + S D    A P R    SKRSR+AEVHNLSE+RRR RINEKM+ALQ LIPN NK DKASMLDEAIEYLK LQLQVQ+++M +G  L P  M  PG+
Sbjct:  280 VVCSSVGSGNSLDG---------PSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGM 417

[Close]

Query:   91 LVNTSVGVGGSLSGNVMVSGANVSSSSVGLS---ENENTDEHDCQSEEGIQASVD-EVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHP--MCLPGI 231
            +V +SVG G SL G          S S  LS   ++ N  + DC SE+  + S D    A P R    SKRSR+AEVHNLSE+RRR RINEKM+ALQ LIPN NK DKASMLDEAIEYLK LQLQVQ+++M +G  L P  M  PG+
Sbjct:  280 VVCSSVGSGNSLDG---------PSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGM 417

[Close]

Query:   91 LVNTSVGVGGSLSGNVMVSGANVSSSSVGLS---ENENTDEHDCQSEEGIQASVD-EVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHP--MCLPGI 231
            +V +SVG G SL G          S S  LS   ++ N  + DC SE+  + S D    A P R    SKRSR+AEVHNLSE+RRR RINEKM+ALQ LIPN NK DKASMLDEAIEYLK LQLQVQ+++M +G  L P  M  PG+
Sbjct:  280 VVCSSVGSGNSLDG---------PSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGM 417

[Close]

Query:   91 LVNTSVGVGGSLSGNVMVSGANVSSSSVGLS---ENENTDEHDCQSEEGIQASVD-EVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHP--MCLPGI 231
            +V +SVG G SL G          S S  LS   ++ N  + DC SE+  + S D    A P R    SKRSR+AEVHNLSE+RRR RINEKM+ALQ LIPN NK DKASMLDEAIEYLK LQLQVQ+++M +G  L P  M  PG+
Sbjct:  280 VVCSSVGSGNSLDG---------PSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGM 417

[Close]

Query:   91 LVNTSVGVGGSLSGNVMVSGANVSSSSVGLS---ENENTDEHDCQSEEGIQASVD-EVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHP--MCLPGI 231
            +V +SVG G SL G          S S  LS   ++ N  + DC SE+  + S D    A P R    SKRSR+AEVHNLSE+RRR RINEKM+ALQ LIPN NK DKASMLDEAIEYLK LQLQVQ+++M +G  L P  M  PG+
Sbjct:  280 VVCSSVGSGNSLDG---------PSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGM 417

[Close]

Query:   91 LVNTSVGVGGSLSGNVMVSGANVSSSSVGLS---ENENTDEHDCQSEEGIQASVD-EVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHP--MCLPGI 231
            +V +SVG G SL G          S S  LS   ++ N  + DC SE+  + S D    A P R    SKRSR+AEVHNLSE+RRR RINEKM+ALQ LIPN NK DKASMLDEAIEYLK LQLQVQ+++M +G  L P  M  PG+
Sbjct:  280 VVCSSVGSGNSLDG---------PSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGM 417

[Close]

BLAST of Cmt252300.2 vs. Araport11
Match: | (Symbols: PIF1, PIL5 | phytochrome interacting factor 3-like 5, PHY-INTERACTING FACTOR 1 | chr2:8704525-8706237 REVERSE LENGTH=407)

HSP 1 Score: 118.627 bits (296), Expect = 3.788e-30
Identity = 69/135 (51.11%), Postives = 84/135 (62.22%), Query Frame = 0

Query:  112 NVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGV 246
            NV        E   TDE + +SEE  QA V           +S+KRSRAAEVHNLSE++RR RINE+MKALQ LIP  NK+DKASMLDEAIEY+K LQLQ+Q+++M  GM               +PHM MG G+
Sbjct:  175 NVDDRKRKEREATTTDETESRSEETKQARVST---------TSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQY----MPHMAMGMGM 296

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BLAST of Cmt252300.2 vs. Araport11
Match: | (Symbols: PIF1, PIL5 | phytochrome interacting factor 3-like 5, PHY-INTERACTING FACTOR 1 | chr2:8704276-8706237 REVERSE LENGTH=407)

HSP 1 Score: 118.627 bits (296), Expect = 3.788e-30
Identity = 69/135 (51.11%), Postives = 84/135 (62.22%), Query Frame = 0

Query:  112 NVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGV 246
            NV        E   TDE + +SEE  QA V           +S+KRSRAAEVHNLSE++RR RINE+MKALQ LIP  NK+DKASMLDEAIEY+K LQLQ+Q+++M  GM               +PHM MG G+
Sbjct:  175 NVDDRKRKEREATTTDETESRSEETKQARVST---------TSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQY----MPHMAMGMGM 296

The following BLAST results are available for this feature:

BLAST of Cmt252300.2 vs. ExPASy TrEMBL
BLAST of Cmt252300.2 vs. ExPASy Swiss-Prot
BLAST of Cmt252300.2 vs. Araport11

BLAST of Cmt252300.2 vs. ExPASy TrEMBL
Analysis Date: 2024-02-08 (Blastp of Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) v1.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
V4RWH0\|V4RWH0_CITCL	0.000e+0	97.23	BHLH domain-containing protein OS=Citrus clementin...	[more]
A0A067GHM3\|A0A067GHM3_CITSI	0.000e+0	99.37	BHLH domain-containing protein (Fragment) OS=Citru...	[more]
A0A2H5PJ36\|A0A2H5PJ36_CITUN	0.000e+0	96.93	BHLH domain-containing protein OS=Citrus unshiu OX...	[more]
A0A6P4ALW8\|A0A6P4ALW8_ZIZJJ	1.266e-103	55.62	Transcription factor SPATULA isoform X1 OS=Ziziphu...	[more]
A0A6P4A3S8\|A0A6P4A3S8_ZIZJJ	1.633e-103	55.62	Transcription factor SPATULA isoform X2 OS=Ziziphu...	[more]
A0A978UYY2\|A0A978UYY2_ZIZJJ	3.019e-101	56.02	BHLH domain-containing protein OS=Ziziphus jujuba ...	[more]
A0A5C7HQT4\|A0A5C7HQT4_9ROSI	1.183e-98	56.93	BHLH domain-containing protein OS=Acer yangbiense ...	[more]
A0A1Q3BI94\|A0A1Q3BI94_CEPFO	1.875e-98	56.53	HLH domain-containing protein OS=Cephalotus follic...	[more]
A0A8K0E3A3\|A0A8K0E3A3_9ROSA	1.193e-97	55.38	BHLH domain-containing protein OS=Rhamnella rubrin...	[more]
A0A833XBW4\|A0A833XBW4_JUGRE	4.883e-96	56.79	BHLH domain-containing protein OS=Juglans regia OX...	[more]

BLAST of Cmt252300.2 vs. ExPASy Swiss-Prot
Analysis Date: 2024-02-08 (Blastp of Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) v1.0 proteins vs UniProt Swissprot)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
SPT_ARATH	2.487e-52	44.34	Transcription factor SPATULA OS=Arabidopsis thalia...	[more]
ALC_ARATH	1.816e-40	46.01	Transcription factor ALC OS=Arabidopsis thaliana O...	[more]
PIL15_ORYSJ	5.170e-33	43.26	Transcription factor PHYTOCHROME INTERACTING FACTO...	[more]
PIF3_ARATH	6.104e-33	54.42	Transcription factor PIF3 OS=Arabidopsis thaliana ...	[more]
PIL13_ORYSJ	3.664e-31	51.59	Transcription factor PHYTOCHROME INTERACTING FACTO...	[more]
PIF1_ARATH	1.342e-28	45.73	Transcription factor PIF1 OS=Arabidopsis thaliana ...	[more]
APG_ORYSJ	1.346e-27	64.71	Transcription factor APG OS=Oryza sativa subsp. ja...	[more]
BH023_ARATH	7.301e-24	45.97	Transcription factor bHLH23 OS=Arabidopsis thalian...	[more]
PIF5_ARATH	5.019e-23	55.14	Transcription factor PIF5 OS=Arabidopsis thaliana ...	[more]
PIL1_ARATH	5.215e-23	41.22	Transcription factor PIL1 OS=Arabidopsis thaliana ...	[more]

BLAST of Cmt252300.2 vs. Araport11
Analysis Date: 2024-02-08 (Blastp of Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) v1.0 proteins vs Araport11)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
\|	2.584e-53	44.34	Symbols: SPT \| SPATULA \| chr4:17414167-17415945 FO...	[more]
\|	1.894e-41	46.01	Symbols: ALC \| ALCATRAZ \| chr5:26785332-26786338 R...	[more]
\|	6.248e-34	54.42	Symbols: PIF3, PAP3, POC1 \| PHYTOCHROME-ASSOCIATED...	[more]
\|	6.248e-34	54.42	Symbols: PIF3, PAP3, POC1 \| PHYTOCHROME-ASSOCIATED...	[more]
\|	6.248e-34	54.42	Symbols: PIF3, PAP3, POC1 \| PHYTOCHROME-ASSOCIATED...	[more]
\|	6.248e-34	54.42	Symbols: PIF3, PAP3, POC1 \| PHYTOCHROME-ASSOCIATED...	[more]
\|	6.248e-34	54.42	Symbols: PIF3, PAP3, POC1 \| PHYTOCHROME-ASSOCIATED...	[more]
\|	6.248e-34	54.42	Symbols: PIF3, PAP3, POC1 \| PHYTOCHROME-ASSOCIATED...	[more]
\|	3.788e-30	51.11	Symbols: PIF1, PIL5 \| phytochrome interacting fact...	[more]
\|	3.788e-30	51.11	Symbols: PIF1, PIL5 \| phytochrome interacting fact...	[more]

InterPro

Analysis Name: InterProScan Analysis for Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) v1.0 proteins
Date Performed: 2024-02-08

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	FUNFAM	G3DSA:4.10.280.10:FF:000004		coord: 154..217 e-value: 5.2E-39 score: 133.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 154..218 e-value: 2.0E-22 score: 80.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 156..220
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 162..209 e-value: 4.2E-11 score: 53.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 159..208 score: 18.069506
IPR031066	Basic helix-loop-helix (bHLH) transcription factors ALC-like, plant	PANTHER	PTHR45855	TRANSCRIPTION FACTOR PIF1-RELATED	coord: 26..314
IPR047265	Transcription factor PIF1-like, basic helix-loop-helix domain	CDD	cd11445	bHLH_AtPIF_like	coord: 160..221 e-value: 2.67587E-37 score: 125.947

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1:4513072..4516351-
coding sequence from alignment at chr1:4513072..4516351-

mRNA sequence

>Cmt252300.2-HZY-T_v1 ID=Cmt252300.2-HZY-T_v1; Name=Cmt252300.2; organism=Citrus maxima; type=mRNA; length=978bp
ATGGAGCAAGATCATGTATATCAGTATAACAACAACGTTAATATATATTC
TACAGCTTCATCATCTTCAGTTCATAACACTCACGTTCCTCCGTCTTCTT
CGGACGAAATCTCTATGTTTCTTCATCAGATTCTTTACCGTTCATCATCA
TCATCGTCAACAACAATAACAGCGACAACGTCGTCTCCGAACGTGACCCA
CGGGGTCCCACACCCAGTGGAGATCAGTGCTCACCGTTTGAGCAAATCAT
CTGGGATCTCAGCCGTTGATTTAGTGAACACGTCTGTCGGTGTTGGTGGT
TCTTTGTCGGGGAATGTGATGGTGAGTGGAGCCAACGTGTCTTCTTCTTC
AGTTGGACTTAGCGAGAACGAAAACACTGATGAACATGATTGTCAAAGCG
AGGAGGGTATTCAAGCGTCAGTAGATGAGGTTACAGCCAAACCAGTGCGT
CCTCGAAGTTCATCAAAAAGAAGCCGAGCTGCAGAGGTTCATAATTTGTC
TGAAAAGAGGAGGAGGAGCAGGATTAATGAGAAAATGAAAGCATTGCAAA
GCTTAATACCAAATTCTAATAAGACCGACAAAGCATCAATGCTTGATGAA
GCGATTGAGTACCTCAAGCACCTTCAGCTCCAAGTACAGGTGTTAACAAT
GAGAAATGGAATGAGTTTACATCCTATGTGCTTGCCCGGCATACTGCCAC
CAATTCAATTACCTCATATGAGAATGGGCTTTGGTGTGGGAAATGGGTCT
CTGCATATGAACTCAACAGGCACACTTGTAAGTCAAGAAACATCGACGCT
GAATGTGTTCAATCTACCAAATCAACACATTTCCTCAAACCAGCTACAAC
TACCCTCTACATCAAATGTAATAAATTCAGAAACTGAGTTTGGGTTGGAT
GCATCAATCCAGGCAAACTTTGGACCCTTCCAGCATGGCACAGCTTCTGG
GGTAAGGGTAAAAGAACCACTTTTATGA

protein sequence of Cmt252300.2-HZY-T_v1

>Cmt252300.2-HZY-T_v1 ID=Cmt252300.2-HZY-T_v1; Name=Cmt252300.2-HZY-T_v1; organism=Citrus maxima; type=polypeptide; length=326bp
MEQDHVYQYNNNVNIYSTASSSSVHNTHVPPSSSDEISMFLHQILYRSSS
SSSTTITATTSSPNVTHGVPHPVEISAHRLSKSSGISAVDLVNTSVGVGG
SLSGNVMVSGANVSSSSVGLSENENTDEHDCQSEEGIQASVDEVTAKPVR
PRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDE
AIEYLKHLQLQVQVLTMRNGMSLHPMCLPGILPPIQLPHMRMGFGVGNGS
LHMNSTGTLVSQETSTLNVFNLPNQHISSNQLQLPSTSNVINSETEFGLD
ASIQANFGPFQHGTASGVRVKEPLL*

mRNA from alignment at chr1:4513072..4516351-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

> ID=; Name=; organism= ; type=; length=3280bp; location=Sequence derived from: chr1:4513072..4516351- (Citrus maxima
CAGTGAGTGTCAAAGTTTCGGCACTGTTAATGATATATATATATATTGAT
GAGCAGCCAACAACAAATTACAAACCCAACGAAAAGAAACCAAGGAAGCG
AAGTAGCAGCTGTACCGAAACTAAATGGAGCAAGATCATGTATATCAGTA
TAACAACAACGTTAATATATATTCTACAGCTTCATCATCTTCAGTTCATA
ACACTCACGTTCCTCCGTCTTCTTCGGACGAAATCTCTATGTTTCTTCAT
CAGATTCTTTACCGTTCATCATCATCATCGTCAACAACAATAACAGCGAC
AACGTCGTCTCCGAACGTGACCCACGGGGTCCCACACCCAGTGGAGATCA
GTGCTCACCGTTTGAGCAAATCATCTGGGATCTCAGCCGTTGATTTAGTG
AACACGTCTGTCGGTGTTGGTGGTTCTTTGTCGGGGAATGTGATGGTGAG
TGGAGCCAACGTGTCTTCTTCTTCAGTTGGACTTAGCGAGAACGAAAACA
CTGATGAACATGATTGTCAAAGCGAGGTACTTTAGCCTGCAAATGCACTG
TTCCTTCTGCTGAGATAGTAATGAAAAATACAGAGAAAATGTTATATAAA
GGAGAATTCCTTTGGGTGGCAAGGGTGGTTAGTTGTTAAAGATTGCAATT
TTTAATTCAGTTTTCTTTTGTTGCAATTTTTAATTCATTTTTTTTCCAGC
CGAGAAAATGTGAGTGGAAGAACAAAGAAAGTAACAGCTTGAATCTTTCG
ACAATTCCTTTACTACTTCATTAGCTTAAAGGAGATTTAATTTCGGTTTA
TCTTTTTAAGCTTTATTTTTGTTTTCAATTGCGGCTTTATTAAAAGTTCA
AATTATTCAACCAGGAGGGTATTCAAGCGTCAGTAGATGAGGTTACAGCC
AAACCAGTGCGTCCTCGAAGTTCATCAAAAAGAAGCCGAGCTGCAGAGGT
TCATAATTTGTCTGAAAAGGTTGGCGTGTTTATCAATATGGCTTTGTTCT
AATTCAGTAACAATAACAATGGGGTAATTTTGAATTTGGTAGTAACGCTT
TGTGTGTGTGTGAGAGCAGAGGAGGAGGAGCAGGATTAATGAGAAAATGA
AAGCATTGCAAAGCTTAATACCAAATTCTAATAAGGTCGTACAAATTTAA
ATTTTGGTTGCCTTCATGCTTGGTTTGCTTTTGTTTAATAGAAATAGTCG
ATTTAATTATTGGATGATTTATTGCATTAACTATCCATGGCAGACCGACA
AAGCATCAATGCTTGATGAAGCGATTGAGTACCTCAAGCACCTTCAGCTC
CAAGTACAGGTTTGTCGATTCTCCAATTTCTAGACTTCTTTCCTGGTAGT
GCTACTTTGAAAAATGTCATTCAGTTTTGATGCCTTTAGTCTTGAAAATC
GGAGTGAGTCTCCAAGCTTGCTGTTCCCTGCAATGTAGTCAATTAGTTGA
ACTGATTATAGGTTTGTAAGATTTGTAAACCTTGAAATTTAACCACTAGA
AAGATTATCCTTAAAGAATAATGTATTCAGATGCTGCTGAGAATGTTGAG
AGAACTGTATTGCTACGAGGGCTGTGTGTGTTGGAGGAAGGGCCTGGAAG
ATAGCCCAGATCTGAGATCAGGTGCAATTTGTTGTCAAGTCTTTTGCATA
GTTATGCCTTGCACTTTCCATTGGATTAGCAATTGCTGATAGAGATTCAT
TTGTTTAAGTCCACATAAATTTACTACTGATTGCAGGTCAATCTCCTCAT
GCTCTTTGCCTATAAAAAGCAAAAATAAATTTAAGGAAGATGATGGGGCC
ACAATGTAATACATATGAACAAAGAAAGTGATTTGAATGTAGTTGTTAGC
CCCAATAATGCTATATATATTGATGTTTTATCTTGTGGTGTTAAGTTGAA
CAACATATATGGAATAGCTTGAACAAAGAAAGTGATTCAGTGTAGCCGTT
TGTGTGAGAAAAAATGGTAGTGTTAAGGTTAATTAGCTTGGTCCTGACTT
GTTATATTATGATTCTGATTTTAGGTGTTAACAATGAGAAATGGAATGAG
TTTACATCCTATGTGCTTGCCCGGCATACTGCCACCAATTCAATTACCTC
ATATGAGAATGGGCTTTGGTGTGGGAAATGGGTCTCTGCATATGAACTCA
ACAGGCACACTTGTAAGTCAAGAAACATCGACGCTGAATGTGTTCAATCT
ACCAAATCAACACATTTCCTCAAACCAGCTACAACTACCCTCTACATCAA
ATGTAATAAATTCAGAAACTGAGTTTGGGTTGGATGCATCAATCCAGGCA
AACTTTGGACCCTTCCAGCATGGCACAGCTTCTGGGGTAAGGGTAAAAGA
ACCACTTTTATGAGTAACCATGCGTGCAAAGTTGAGGAATGACATTAGCC
AATATAATATAGTTTTGCAATGTGAAGGAAACTAGCAGGGAGGACATGTT
GCCACATCAACATTTAAATGTCGGTCATTCTGTAACAAATCCATCAGGTG
CGACCATGAAGTTTACATTCCTCAACTATTTAAATTATATGTTCTAAAAA
TTCAATTGTTTGGATCCATCAGTCCGCTTGAAGTAGTATTTTTTACTGTC
ATTTTGTCTGTCGAGAAGGAACAAAGCATTTTAAACCCTTTATCTGACAT
GGGCTTCTGTATTGAATTTGAAACTGGAATCACAGCTCCAGCTGTGCATA
CCTTTAATTCACAAGGTTCTGATCTAAAAGACAGAAGCTCTTTGGAAGCA
TGCATGATAGGAAGAGACCGTGCAGAAGGTGTGCACCTAAAGGCTATTGA
TCACAATCTTGTACTTTCCCCACACTTAAAAGGGTAAAAATACTTTGGTG
AATCAGATAATATTTTTGTGTCTCACTTCTACATGCATGCCTTAATTTCA
CTTGGTGTATGTTTTTTACCAGCATGCAGACAGGTAGAAGTGTCTGCAGT
GATGATATGAAGCCAGAAAGAAAAGATTTTTGAGTTTATTGGATTCATGC
TACTCAATTATAATGCATTTGGATTTAGGGGCGCTGCGGTTAACTGCCAG
CTTTAACATCACTAAATGTTGCTTAGGGAATCCTCAAAAATTAAATTAGC
TTATTTTGGACATGCCTCTAACCATGTTTTAGCAACCGAATTTGCAAAAT
TAGCTTGTAGGCAATGGTTGTGGTCAAAAGTAGGGATTACTCTTGTAAAT
TCCATTTTCTTTGGGTCAGGACTGACGTTATCTTACGACTCATATCTAGT
AACTATTTATGATATGCTAATGTTCTTGCC

Coding sequence (CDS) from alignment at chr1:4513072..4516351-

>Cmt252300.2-HZY-T_v1 ID=Cmt252300.2-HZY-T_v1; Name=Cmt252300.2; organism=Citrus maxima; type=CDS; length=978bp; location=Sequence derived from: chr1:4513072..4516351- (Citrus maxima
ATGGAGCAAGATCATGTATATCAGTATAACAACAACGTTAATATATATTC
TACAGCTTCATCATCTTCAGTTCATAACACTCACGTTCCTCCGTCTTCTT
CGGACGAAATCTCTATGTTTCTTCATCAGATTCTTTACCGTTCATCATCA
TCATCGTCAACAACAATAACAGCGACAACGTCGTCTCCGAACGTGACCCA
CGGGGTCCCACACCCAGTGGAGATCAGTGCTCACCGTTTGAGCAAATCAT
CTGGGATCTCAGCCGTTGATTTAGTGAACACGTCTGTCGGTGTTGGTGGT
TCTTTGTCGGGGAATGTGATGGTGAGTGGAGCCAACGTGTCTTCTTCTTC
AGTTGGACTTAGCGAGAACGAAAACACTGATGAACATGATTGTCAAAGCG
AGGAGGGTATTCAAGCGTCAGTAGATGAGGTTACAGCCAAACCAGTGCGT
CCTCGAAGTTCATCAAAAAGAAGCCGAGCTGCAGAGGTTCATAATTTGTC
TGAAAAGAGGAGGAGGAGCAGGATTAATGAGAAAATGAAAGCATTGCAAA
GCTTAATACCAAATTCTAATAAGACCGACAAAGCATCAATGCTTGATGAA
GCGATTGAGTACCTCAAGCACCTTCAGCTCCAAGTACAGGTGTTAACAAT
GAGAAATGGAATGAGTTTACATCCTATGTGCTTGCCCGGCATACTGCCAC
CAATTCAATTACCTCATATGAGAATGGGCTTTGGTGTGGGAAATGGGTCT
CTGCATATGAACTCAACAGGCACACTTGTAAGTCAAGAAACATCGACGCT
GAATGTGTTCAATCTACCAAATCAACACATTTCCTCAAACCAGCTACAAC
TACCCTCTACATCAAATGTAATAAATTCAGAAACTGAGTTTGGGTTGGAT
GCATCAATCCAGGCAAACTTTGGACCCTTCCAGCATGGCACAGCTTCTGG
GGTAAGGGTAAAAGAACCACTTTTATGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR036638	HLH_DNA-bd_sf
IPR011598	bHLH_dom
IPR031066	bHLH_ALC-like_plant
IPR047265	PIF1-like_bHLH

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity