CsN08G008700.1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CsN08G008700.1 vs. ExPASy TrEMBL (2024)
Match: tr|V4RS43|V4RS43_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029624mg PE=4 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 6.109e-71 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 Query: 1 MMSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQILED 109
MMSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQILED
Sbjct: 1 MMSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQILED 109
BLAST of CsN08G008700.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067ET64|A0A067ET64_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g033912mg PE=4 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 6.109e-71 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 Query: 1 MMSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQILED 109
MMSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQILED
Sbjct: 1 MMSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQILED 109
BLAST of CsN08G008700.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2H5Q9A2|A0A2H5Q9A2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_208140 PE=4 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.799e-70 Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0 Query: 1 MMSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQILED 109
MMSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQI ED
Sbjct: 1 MMSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQIRED 109
BLAST of CsN08G008700.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1Q3D0R9|A0A1Q3D0R9_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_29478 PE=4 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.176e-51 Identity = 83/108 (76.85%), Postives = 95/108 (87.96%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQILED 109
MSRP LL FLLI+LIITSQFEWRQQLV D D+TP+I Q+++QI KREE VKEKIILSQEKNIQRLNELV+SLQ+QL CRGNNE+RN T H+SEHV E++RQQILED
Sbjct: 1 MSRPMLLAFLLIVLIITSQFEWRQQLVVDNDTTPNITQQKNQILKREEVVKEKIILSQEKNIQRLNELVRSLQQQLLQCRGNNESRNGTARHLSEHVNELKRQQILED 108
BLAST of CsN08G008700.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7J8ZMG7|A0A7J8ZMG7_9ROSI (Uncharacterized protein OS=Gossypium laxum OX=34288 GN=Golax_012076 PE=4 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.341e-51 Identity = 79/108 (73.15%), Postives = 96/108 (88.89%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQILED 109
MSRP LLVFL IILIITSQFEWRQ LV D+D+TPS++QK QIS+REEAVKEKIILSQEK IQRLNELV+SL++QL C+G+N+T N TVS+++E ++E+ERQQILED
Sbjct: 1 MSRPMLLVFLFIILIITSQFEWRQPLVVDVDTTPSVSQKPQQISRREEAVKEKIILSQEKKIQRLNELVRSLEQQLLQCKGDNKTTNGTVSYLTERILELERQQILED 108
BLAST of CsN08G008700.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7J8UJG1|A0A7J8UJG1_9ROSI (Peptidyl-prolyl cis-trans isomerase G OS=Gossypium klotzschianum OX=34286 GN=Goklo_017998 PE=4 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.341e-51 Identity = 79/108 (73.15%), Postives = 96/108 (88.89%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQILED 109
MSRP LLVFL IILIITSQFEWRQ LV D+D+TPS++QK QIS+REEAVKEKIILSQEK IQRLNELV+SL++QL C+G+N+T N TVS+++E ++E+ERQQILED
Sbjct: 1 MSRPMLLVFLFIILIITSQFEWRQPLVVDVDTTPSVSQKPQQISRREEAVKEKIILSQEKKIQRLNELVRSLEQQLLQCKGDNKTTNGTVSYLTERILELERQQILED 108
BLAST of CsN08G008700.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7J8NGU3|A0A7J8NGU3_9ROSI (Uncharacterized protein OS=Gossypium lobatum OX=34289 GN=Golob_027932 PE=4 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.341e-51 Identity = 79/108 (73.15%), Postives = 96/108 (88.89%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQILED 109
MSRP LLVFL IILIITSQFEWRQ LV D+D+TPS++QK QIS+REEAVKEKIILSQEK IQRLNELV+SL++QL C+G+N+T N TVS+++E ++E+ERQQILED
Sbjct: 1 MSRPMLLVFLFIILIITSQFEWRQPLVVDVDTTPSVSQKPQQISRREEAVKEKIILSQEKKIQRLNELVRSLEQQLLQCKGDNKTTNGTVSYLTERILELERQQILED 108
BLAST of CsN08G008700.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7J8XB88|A0A7J8XB88_GOSAI (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_025650 PE=4 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.341e-51 Identity = 79/108 (73.15%), Postives = 96/108 (88.89%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQILED 109
MSRP LLVFL IILIITSQFEWRQ LV D+D+TPS++QK QIS+REEAVKEKIILSQEK IQRLNELV+SL++QL C+G+N+T N TVS+++E ++E+ERQQILED
Sbjct: 1 MSRPMLLVFLFIILIITSQFEWRQPLVVDVDTTPSVSQKPQQISRREEAVKEKIILSQEKKIQRLNELVRSLEQQLLQCKGDNKTTNGTVSYLTERILELERQQILED 108
BLAST of CsN08G008700.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7J8RNG2|A0A7J8RNG2_GOSDV (Peptidyl-prolyl cis-trans isomerase G OS=Gossypium davidsonii OX=34287 GN=Godav_015538 PE=4 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.341e-51 Identity = 79/108 (73.15%), Postives = 96/108 (88.89%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQILED 109
MSRP LLVFL IILIITSQFEWRQ LV D+D+TPS++QK QIS+REEAVKEKIILSQEK IQRLNELV+SL++QL C+G+N+T N TVS+++E ++E+ERQQILED
Sbjct: 1 MSRPMLLVFLFIILIITSQFEWRQPLVVDVDTTPSVSQKPQQISRREEAVKEKIILSQEKKIQRLNELVRSLEQQLLQCKGDNKTTNGTVSYLTERILELERQQILED 108
BLAST of CsN08G008700.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7J9N4J0|A0A7J9N4J0_GOSSC (Peptidyl-prolyl cis-trans isomerase G OS=Gossypium schwendimanii OX=34291 GN=Goshw_022840 PE=4 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.341e-51 Identity = 79/108 (73.15%), Postives = 96/108 (88.89%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVSHMSEHVIEVERQQILED 109
MSRP LLVFL IILIITSQFEWRQ LV D+D+TPS++QK QIS+REEAVKEKIILSQEK IQRLNELV+SL++QL C+G+N+T N TVS+++E ++E+ERQQILED
Sbjct: 1 MSRPMLLVFLFIILIITSQFEWRQPLVVDVDTTPSVSQKPQQISRREEAVKEKIILSQEKKIQRLNELVRSLEQQLLQCKGDNKTTNGTVSYLTERILELERQQILED 108
BLAST of CsN08G008700.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:7374211-7375112 REVERSE LENGTH=108) HSP 1 Score: 143.665 bits (361), Expect = 8.498e-46 Identity = 73/109 (66.97%), Postives = 93/109 (85.32%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNST-VSHMSEHVIEVERQQILED 109
MSRP +LVFLL+ILI+TSQFEWRQ L+ +LD+ PS++QK QI+KREEAVKEKIILSQE++IQRLN+LV+SLQ QL C+G NETRN+T SH ++ IE+ER+ I+ED
Sbjct: 1 MSRPIMLVFLLVILIVTSQFEWRQPLL-ELDAAPSLSQKHQQIAKREEAVKEKIILSQERHIQRLNDLVRSLQMQLQRCKGENETRNATETSHNNKQFIELERKHIVED 108
BLAST of CsN08G008700.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:7374211-7375538 REVERSE LENGTH=100) HSP 1 Score: 113.62 bits (283), Expect = 5.581e-34 Identity = 59/95 (62.11%), Postives = 77/95 (81.05%), Query Frame = 0 Query: 16 IITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNST-VSHMSEHVIEVERQQILED 109
+I FEWRQ L+ +LD+ PS++QK QI+KREEAVKEKIILSQE++IQRLN+LV+SLQ QL C+G NETRN+T SH ++ IE+ER+ I+ED
Sbjct: 7 VINRSFEWRQPLL-ELDAAPSLSQKHQQIAKREEAVKEKIILSQERHIQRLNDLVRSLQMQLQRCKGENETRNATETSHNNKQFIELERKHIVED 100
BLAST of CsN08G008700.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:15968760-15970532 REVERSE LENGTH=108) HSP 1 Score: 100.908 bits (250), Expect = 7.279e-29 Identity = 74/109 (67.89%), Postives = 91/109 (83.49%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNETRNSTVS-HMSEHVIEVERQQILED 109
MS+P LLV LL+ILI+TSQFEWRQ LV +LD+ S +QKQ QIS REEAVKEKII+SQE++IQRLNELV+SLQ QL C+G NET+N+T S H+++ IEVER+QILE
Sbjct: 1 MSKPVLLVCLLVILIVTSQFEWRQPLV-ELDTATSSSQKQQQISDREEAVKEKIIISQERHIQRLNELVRSLQLQLLQCKGENETQNATKSYHINKQFIEVERKQILEG 108
BLAST of CsN08G008700.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:7374272-7375112 REVERSE LENGTH=136) HSP 1 Score: 81.2629 bits (199), Expect = 9.194e-21 Identity = 41/68 (60.29%), Postives = 54/68 (79.41%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLVADLDSTPSINQKQHQISKREEAVKEKIILSQEKNIQRLNEL 69
MSRP +LVFLL+ILI+TSQFEWRQ L+ +LD+ PS++QK QI+KREEAVKEK+ L ++ + L L
Sbjct: 1 MSRPIMLVFLLVILIVTSQFEWRQPLL-ELDAAPSLSQKHQQIAKREEAVKEKMRLVEKHRLIGLATL 67
BLAST of CsN08G008700.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:1906596-1907382 FORWARD LENGTH=106) HSP 1 Score: 68.5514 bits (166), Expect = 3.460e-16 Identity = 38/88 (43.18%), Postives = 62/88 (70.45%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLV--ADLDSTPSI--NQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNE 85
M+R ++L+F+L+ +++TSQFEW +Q+ ++ S P I +++Q I + +E+V+ K IL QEK IQ+LNELV+ L+ QL CR N+
Sbjct: 1 MTRSWVLLFVLMFIVLTSQFEWNEQVENESETSSRPLILSDKEQQHIPQGKESVQVKKILFQEKKIQKLNELVRDLRRQLLQCRNENQ 88
BLAST of CsN08G008700.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:1906596-1907382 FORWARD LENGTH=106) HSP 1 Score: 68.5514 bits (166), Expect = 3.460e-16 Identity = 38/88 (43.18%), Postives = 62/88 (70.45%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLV--ADLDSTPSI--NQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNE 85
M+R ++L+F+L+ +++TSQFEW +Q+ ++ S P I +++Q I + +E+V+ K IL QEK IQ+LNELV+ L+ QL CR N+
Sbjct: 1 MTRSWVLLFVLMFIVLTSQFEWNEQVENESETSSRPLILSDKEQQHIPQGKESVQVKKILFQEKKIQKLNELVRDLRRQLLQCRNENQ 88
BLAST of CsN08G008700.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:1906596-1907382 FORWARD LENGTH=106) HSP 1 Score: 68.5514 bits (166), Expect = 3.460e-16 Identity = 38/88 (43.18%), Postives = 62/88 (70.45%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLV--ADLDSTPSI--NQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNE 85
M+R ++L+F+L+ +++TSQFEW +Q+ ++ S P I +++Q I + +E+V+ K IL QEK IQ+LNELV+ L+ QL CR N+
Sbjct: 1 MTRSWVLLFVLMFIVLTSQFEWNEQVENESETSSRPLILSDKEQQHIPQGKESVQVKKILFQEKKIQKLNELVRDLRRQLLQCRNENQ 88
BLAST of CsN08G008700.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:1906596-1907382 FORWARD LENGTH=106) HSP 1 Score: 68.5514 bits (166), Expect = 3.460e-16 Identity = 38/88 (43.18%), Postives = 62/88 (70.45%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLV--ADLDSTPSI--NQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNE 85
M+R ++L+F+L+ +++TSQFEW +Q+ ++ S P I +++Q I + +E+V+ K IL QEK IQ+LNELV+ L+ QL CR N+
Sbjct: 1 MTRSWVLLFVLMFIVLTSQFEWNEQVENESETSSRPLILSDKEQQHIPQGKESVQVKKILFQEKKIQKLNELVRDLRRQLLQCRNENQ 88
BLAST of CsN08G008700.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:1906596-1907382 FORWARD LENGTH=106) HSP 1 Score: 68.5514 bits (166), Expect = 3.460e-16 Identity = 38/88 (43.18%), Postives = 62/88 (70.45%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLV--ADLDSTPSI--NQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNE 85
M+R ++L+F+L+ +++TSQFEW +Q+ ++ S P I +++Q I + +E+V+ K IL QEK IQ+LNELV+ L+ QL CR N+
Sbjct: 1 MTRSWVLLFVLMFIVLTSQFEWNEQVENESETSSRPLILSDKEQQHIPQGKESVQVKKILFQEKKIQKLNELVRDLRRQLLQCRNENQ 88
BLAST of CsN08G008700.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:1906596-1907382 FORWARD LENGTH=106) HSP 1 Score: 68.5514 bits (166), Expect = 3.460e-16 Identity = 38/88 (43.18%), Postives = 62/88 (70.45%), Query Frame = 0 Query: 2 MSRPFLLVFLLIILIITSQFEWRQQLV--ADLDSTPSI--NQKQHQISKREEAVKEKIILSQEKNIQRLNELVQSLQEQLSHCRGNNE 85
M+R ++L+F+L+ +++TSQFEW +Q+ ++ S P I +++Q I + +E+V+ K IL QEK IQ+LNELV+ L+ QL CR N+
Sbjct: 1 MTRSWVLLFVLMFIVLTSQFEWNEQVENESETSSRPLILSDKEQQHIPQGKESVQVKKILFQEKKIQKLNELVRDLRRQLLQCRNENQ 88 The following BLAST results are available for this feature:
BLAST of CsN08G008700.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2025-01-03 (Blastp of Citrus sinensis cv. Newhall T2T v2.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CsN08G008700.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2025-01-03 (Blastp of Citrus sinensis cv. Newhall T2T v2.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CsN08G008700.1 vs. Araport11
Analysis Date: 2025-01-03 (Blastp of Citrus sinensis cv. Newhall T2T v2.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus sinensis cv. Newhall T2T v2.0 proteins
Date Performed: 2025-01-03 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCitSine.Newhall.2.0.CsN08G008700.1 ID=drCitSine.Newhall.2.0.CsN08G008700.1; Name=CsN08G008700.1; organism=Citrus sinensis; type=mRNA; length=330bpback to top protein sequence of drCitSine.Newhall.2.0.CsN08G008700.1 >drCitSine.Newhall.2.0.CsN08G008700.1 ID=drCitSine.Newhall.2.0.CsN08G008700.1; Name=drCitSine.Newhall.2.0.CsN08G008700.1; organism=Citrus sinensis; type=polypeptide; length=110bpback to top mRNA from alignment at Chr08:9850740..9853357+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2618bp; location=Sequence derived from: Chr08:9850740..9853357+ (Citrus sinensisback to top Coding sequence (CDS) from alignment at Chr08:9850740..9853357+ >drCitSine.Newhall.2.0.CsN08G008700.1 ID=drCitSine.Newhall.2.0.CsN08G008700.1; Name=CsN08G008700.1; organism=Citrus sinensis; type=CDS; length=330bp; location=Sequence derived from: Chr08:9850740..9853357+ (Citrus sinensisback to top |