CsN08G008760.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CsN08G008760.1 vs. ExPASy TrEMBL (2024)
Match: tr|V4SJY4|V4SJY4_CITCL (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10029945mg PE=4 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 8.929e-50 Identity = 86/106 (81.13%), Postives = 90/106 (84.91%), Query Frame = 0 Query: 43 IAVEYTSLKD------------SKANFQFHSSLDNIPMCNFLVNRAALAYLSPMPATSSRTSHRKQFFIRTWDKVNLPVRACVNFINRHVVSKITGVFDKVMAAIH 136 IA+EYTSL+D SKANFQFHSSLD IP+ NFLV+RAALAYLSPMPATS RTSHRKQ FIRTWDKVNLPVRACVNFINRHVVSKITGVFDKVMAAIH Sbjct: 1 IAIEYTSLRDVMPWMKHCRSAYSKANFQFHSSLD-IPVSNFLVHRAALAYLSPMPATS-RTSHRKQLFIRTWDKVNLPVRACVNFINRHVVSKITGVFDKVMAAIH 104
BLAST of CsN08G008760.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A061GVA2|A0A061GVA2_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_041294 PE=4 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.147e-20 Identity = 57/153 (37.25%), Postives = 86/153 (56.21%), Query Frame = 0 Query: 2 KSKKLSFIAKIKSNSFPRHSNCNNTYFSASGSEINFCSATAIAVEYTSLKDSKANFQFHSSLDN-------------IPMCNFLVNRAALAYLSPM--PATSSRTSHRKQFFIRTWDKVNLPVRACVNFINRHVVSKITGVFDKVMAAIHVTR 139 +SKKL+F AKI+SN+FP+ ++ ++Y++A SE++ S++ + YTSLKD + + S +N IP+ N LV +AA YL PM P SS T+ ++ R W +V PV+AC FI R ++ KI F+K AI R Sbjct: 8 ESKKLAFTAKIESNNFPK-TDRQSSYYAALDSELD--SSSPLISTYTSLKDLMPSSKGSQSQNNPYSAGSTIASAYEIPITNLLVKKAAWVYLQPMALPPNSSSTTPKEHILCRAWVEVKSPVKACFRFIRRTIIHKIACAFEKFSGAILFGR 157
BLAST of CsN08G008760.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7N2KLV7|A0A7N2KLV7_QUELO (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.381e-18 Identity = 54/148 (36.49%), Postives = 76/148 (51.35%), Query Frame = 0 Query: 2 KSKKLSFIAKIKSNSFPRHSNCNNTYFSASGSEINFCSATAIAVEYTSLKD------------SKANFQFH-SSLDNIPMCNFLVNRAALAYLSPMPATSSRTSHRKQFFIRTWDKVNLPVRACVNFINRHVVSKITGVFDKVMAAIH 136 +S K + + +S SFPR + +A+ SE+ S + YTSLK+ S + +F S IP+ NF+V +AA AYL P P SS + K WD+ LPV C+NFINRHV+ IT FD+++ AIH Sbjct: 7 QSGKFTSRKRFQSKSFPRSVREETAFAAANNSELANSSNSP---SYTSLKELLPPSSEIRRRKSMLSRRFGMQSAHEIPISNFIVQKAAWAYLQPSPPVSSFVAGSKCILYLVWDEFKLPVHTCLNFINRHVIRAITSAFDRLLGAIH 151
BLAST of CsN08G008760.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7N2KLZ0|A0A7N2KLZ0_QUELO (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.992e-18 Identity = 54/148 (36.49%), Postives = 76/148 (51.35%), Query Frame = 0 Query: 2 KSKKLSFIAKIKSNSFPRHSNCNNTYFSASGSEINFCSATAIAVEYTSLKD------------SKANFQFH-SSLDNIPMCNFLVNRAALAYLSPMPATSSRTSHRKQFFIRTWDKVNLPVRACVNFINRHVVSKITGVFDKVMAAIH 136 +S K + + +S SFPR + +A+ SE+ S + YTSLK+ S + +F S IP+ NF+V +AA AYL P P SS + K WD+ LPV C+NFINRHV+ IT FD+++ AIH Sbjct: 7 QSGKFASRKRFQSKSFPRTVREETAFAAANNSELANSSNSP---SYTSLKELLPPSSEIRRRKSMLSRRFGMQSAHEIPISNFIVQKAAWAYLQPSPPVSSFVAGSKCILYLVWDEFKLPVHTCLNFINRHVIRAITSAFDRLLGAIH 151
BLAST of CsN08G008760.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T1NT62|A0A8T1NT62_CARIL (Uncharacterized protein OS=Carya illinoinensis OX=32201 GN=CIPAW_13G131800 PE=4 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.390e-16 Identity = 48/130 (36.92%), Postives = 69/130 (53.08%), Query Frame = 0 Query: 13 KSNSFPRHSNCNNTYFSASGSEINFCSATAIAVEYTSLKD-----SKANFQFHSSLDNIPMCNFLVNRAALAYLSPMPATSSRTS-HRKQFFIRTWDKVNLPVRACVNFINRHVVSKITGVFDKVMAAIH 136 + SFPR + +T F A+ SE+ + + YTSLKD + S+ IP+ NFLV RAA AYL P P + + +S + F R W+++ PV AC+ F NR V++ IT D+V IH Sbjct: 10 QCRSFPR-TVLEDTAFVAANSEL----IESPPLAYTSLKDLLPRRPPSRGLSMQSVHEIPISNFLVQRAAWAYLQPTPVSGTSSSCGNRWLFSRVWEELRPPVNACIKFFNRKVMTAITQALDRVFGVIH 134
BLAST of CsN08G008760.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P9E1C7|A0A6P9E1C7_JUGRE (Uncharacterized protein LOC118344497 OS=Juglans regia OX=51240 GN=LOC118344497 PE=4 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.305e-15 Identity = 52/131 (39.69%), Postives = 68/131 (51.91%), Query Frame = 0 Query: 13 KSNSFPRHSNCNNTYFSASGSEINFCSATAIAVEYTSLKD-----SKANFQFHSSLDNIPMCNFLVNRAALAYLSPMP--ATSSRTSHRKQFFIRTWDKVNLPVRACVNFINRHVVSKITGVFDKVMAAIH 136 + SFPR + +T F A+ SE+ S + YTSLKD S+ IP+ NFLV RAA AYL P P TSS +R F R W+++ PV AC+ F NR V++ IT D+V IH Sbjct: 10 QCRSFPR-TVLEDTAFVAANSELIIESP---PLAYTSLKDLLPRRPPTRGLSMQSVHEIPISNFLVQRAAWAYLQPTPVSGTSSSCGYRC-IFSRVWEELRPPVNACIRFFNRKVMTAITQALDRVFGVIH 135
BLAST of CsN08G008760.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7J7DZ72|A0A7J7DZ72_TRIWF (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW02G00719 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.413e-13 Identity = 53/148 (35.81%), Postives = 75/148 (50.68%), Query Frame = 0 Query: 2 KSKKLSFIAKIKSNSFPRHSNCNNTYFSASGSEINFCSATAIAVEYTSLKD---------SKANFQFHSSLDNIPMCNFLVNRAALAYLSPM-----PATSSRTSHRKQFFIRTWDKVNLPVRACVNFINRHVVSKITGVFDKVMAAI 135 K K + + K+ +SFP+ + +SAS S+ N S T YTSLKD +++ Q S+ IP+ NFLV +AA AYL PM + S + K F R WD + LP AC+ FIN H++ KI+ FD V + Sbjct: 11 KEKPILLLGKL--HSFPQ-TALEKKLYSASKSD-NVHSNTCPT--YTSLKDLIPSNRRRLTRSPLQVQSA-HEIPITNFLVKKAAWAYLQPMLEPSSSSRRSNNNESKHIFGRIWDDLKLPANACLRFINEHIIVKISRAFDLVFGGM 151
BLAST of CsN08G008760.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8X8A060|A0A8X8A060_POPTO (Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_018038 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.396e-11 Identity = 50/148 (33.78%), Postives = 75/148 (50.68%), Query Frame = 0 Query: 2 KSKKLSFIAKIKSNSFPRHSNCNNTYFSASGSEINFCSATAIAVEYTSLKD-----------SKANFQFHSSLDNIPMCNFLVNRAALAYLSPMPATSS------RTSHRKQFFIRTWDKVNLPVRACVNFINRHVVSKITGVFDKVM 132 +SKKLSFI K KSNSFP + C T + + S + S+ +++ YTS+KD S+ F S ++I + N LV +AA YL P+P T + R F+ W+K+ + C FIN ++V KIT D ++ Sbjct: 12 QSKKLSFITKTKSNSFPA-ALCEETS-NPNASLKHALSSPSLSYTYTSVKDLIPCVKSQSPLSQGGFCTIRSAEDIAISNVLVQKAAWLYLQPLPKTRTPPLPPPPPPPRTYFWGHIWNKL---MNTCPKFINSNIVGKITDALDMLL 154
BLAST of CsN08G008760.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7J6WCY3|A0A7J6WCY3_THATH (Copii coat assembly protein sec16 protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_015213 PE=4 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.827e-10 Identity = 49/141 (34.75%), Postives = 74/141 (52.48%), Query Frame = 0 Query: 11 KIKSNSFPRHSNCNNTYFSASGSEINFCSATAIAVEYTSLKD-----------SKANFQFHSSLDNIPMCNFLVNRAALAYLSPM---PATSSRTSHRKQFFIRTWDKVNLPVRACVNFINRHVVSKITGVFDKVMAAIHV 137 K +S+SFP +N + + F ++F + ++ YTSL+D + N Q S+ IP+ N LV +AA AYL PM P +S+R S R+ + + D V P +AC FI R V+ IT VFD+ + AI + Sbjct: 31 KKQSSSFP-STNDDKSSFPT----VDFELISLKSLAYTSLRDILPSLSAVQSPTGCNTQ---SMYEIPIRNHLVKQAAWAYLQPMSASPGSSNRYSFRRMWTRFSTDYVRNPFKACFGFIRRRVLPMITQVFDRFLGAIQI 163
BLAST of CsN08G008760.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8X8D698|A0A8X8D698_POPTO (Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_016245 PE=4 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 4.053e-10 Identity = 50/148 (33.78%), Postives = 71/148 (47.97%), Query Frame = 0 Query: 2 KSKKLSFIAKIKSNSFPRHSNCNNTYFSASGSEINFCSATAIAVEYTSLKD-----------SKANFQFHSSLDNIPMCNFLVNRAALAYLSPMPATSS---------RTSHRKQFFIRTWDKVNLPVRACVNFINRHVVSKITGVFD 129 +SKKLSFI K KSNSFP + C T + + S + S+ ++ YTS+KD S+ F S ++I + N LV +AA YL P+P T + R F+ W+K+ + C FIN +V KIT D Sbjct: 13 QSKKLSFITKTKSNSFPT-ALCEETS-NPNASLKHALSSPSLTYAYTSVKDLIPWVKSHSPLSQGGFCTIRSAEDIAISNVLVQKAAWLYLQPLPKTRTPPPPPPPPPPPPPRTYFWGHIWNKL---MNTCPKFINGDIVGKITDALD 155 The following BLAST results are available for this feature:
BLAST of CsN08G008760.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2025-01-03 (Blastp of Citrus sinensis cv. Newhall T2T v2.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CsN08G008760.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2025-01-03 (Blastp of Citrus sinensis cv. Newhall T2T v2.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of CsN08G008760.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2025-01-03 (Blastp of Citrus sinensis cv. Newhall T2T v2.0 proteins vs Araport11) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus sinensis cv. Newhall T2T v2.0 proteins
Date Performed: 2025-01-03 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCitSine.Newhall.2.0.CsN08G008760.1 ID=drCitSine.Newhall.2.0.CsN08G008760.1; Name=CsN08G008760.1; organism=Citrus sinensis; type=mRNA; length=426bpback to top protein sequence of drCitSine.Newhall.2.0.CsN08G008760.1 >drCitSine.Newhall.2.0.CsN08G008760.1 ID=drCitSine.Newhall.2.0.CsN08G008760.1; Name=drCitSine.Newhall.2.0.CsN08G008760.1; organism=Citrus sinensis; type=polypeptide; length=142bpback to top mRNA from alignment at Chr08:9891476..9891937+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=462bp; location=Sequence derived from: Chr08:9891476..9891937+ (Citrus sinensisback to top Coding sequence (CDS) from alignment at Chr08:9891476..9891937+ >drCitSine.Newhall.2.0.CsN08G008760.1 ID=drCitSine.Newhall.2.0.CsN08G008760.1; Name=CsN08G008760.1; organism=Citrus sinensis; type=CDS; length=426bp; location=Sequence derived from: Chr08:9891476..9891937+ (Citrus sinensisback to top |