CsN08G008830.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of CsN08G008830.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067ET51|A0A067ET51_CITSI (Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g043833mg PE=4 SV=1) HSP 1 Score: 479.174 bits (1232), Expect = 1.854e-170 Identity = 235/237 (99.16%), Postives = 236/237 (99.58%), Query Frame = 0 Query: 1 MENSRPATGYPAPTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVLL 237 MENSRPATGYPAPTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRV + Sbjct: 1 MENSRPATGYPAPTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVSM 237
BLAST of CsN08G008830.1 vs. ExPASy TrEMBL (2024)
Match: tr|V4SA84|V4SA84_CITCL (Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10029176mg PE=4 SV=1) HSP 1 Score: 477.248 bits (1227), Expect = 1.277e-169 Identity = 234/239 (97.91%), Postives = 237/239 (99.16%), Query Frame = 0 Query: 1 MENSRPATGYPAPTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVLLDY 239 MENSRPATGYPAPTHNGYPPPNTAYPYSA PPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRV +++ Sbjct: 1 MENSRPATGYPAPTHNGYPPPNTAYPYSAPPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVAVNF 239
BLAST of CsN08G008830.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2H5Q9A8|A0A2H5Q9A8_CITUN (Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_208250 PE=4 SV=1) HSP 1 Score: 476.863 bits (1226), Expect = 1.507e-169 Identity = 234/237 (98.73%), Postives = 235/237 (99.16%), Query Frame = 0 Query: 1 MENSRPATGYPAPTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVLL 237 MENSRPATGYPAPTHNGYPPPNTAYPYSA PPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRV + Sbjct: 1 MENSRPATGYPAPTHNGYPPPNTAYPYSAPPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVSM 237
BLAST of CsN08G008830.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA39T8V6|A0AA39T8V6_ACESA (Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein OS=Acer saccharum OX=4024 GN=LWI29_034383 PE=4 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 1.383e-86 Identity = 136/223 (60.99%), Postives = 161/223 (72.20%), Query Frame = 0 Query: 1 MEN-SRPATGYPAPTHNGYPPPNTAYPYSAAPP-QSQPYSYPPYYQP------PTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVP 215 MEN SRP TGYPAP NG+P A+PY A PP SQPY YPPYYQ P RR + LR ++V VA VI G LLIFWLVVRP +PEF L SLSVSNFS NQS+VT WDA AYNPNKKM VSYYDVVS I++ +LT T + PF QDTR +T L+AKFS+ID YV+ K ++ +N++R G+V F+ +LEAIAGF+YG WR RRRL+RVWC DVP Sbjct: 1 MENPSRPVTGYPAPNPNGHP----AHPYQAPPPPLSQPYHYPPYYQSAPPPLYPNRRRSFLRTILVVTVAFFVIFGSILLIFWLVVRPHLPEFQLASLSVSNFSANQSRVTATWDARYRAYNPNKKMTVSYYDVVSYIFFKSEFLTSTQIAPFKQDTRNQTDLTAKFSIIDYYVDAKHVNDLNSQRTHGSVTFNVKLEAIAGFRYGAWRARRRLIRVWCNDVP 219
BLAST of CsN08G008830.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5C7IWR6|A0A5C7IWR6_9ROSI (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_002117 PE=4 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 1.650e-80 Identity = 133/240 (55.42%), Postives = 165/240 (68.75%), Query Frame = 0 Query: 1 MEN-SRPATGYPAPTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQPPTR--RNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSK--GSGSLVGGARKCRV 235 MEN SR TGYPAP NG+P P Y PP R + LR ++V VA VI G LLIFWLVVRP +PEF L+SLSVSNFS NQS+VT WDA AYNPNKKM VSYYDVVS I++ ++LT T + PF QDTR +T L+AKFS+ID YV+ K+++ +N++R G+V F+ +LEAIAGF+YG WR RRR++RVWC +VP+NVSS GSG+LVGG R C+V Sbjct: 1 MENPSRLVTGYPAPNPNGHPAHPYPAPPPPLSQPYHYPPYYHPAAPPYPNPRRSFLRTILVVTVAFFVIFGSVLLIFWLVVRPHLPEFQLSSLSVSNFSANQSRVTATWDARYHAYNPNKKMTVSYYDVVSYIFFKSDFLTSTQIAPFKQDTRNQTDLTAKFSIIDYYVDAKLVNDLNSQRTHGSVTFNVKLEAIAGFRYGAWRARRRVIRVWCNNVPINVSSNSGGSGNLVGGPRNCKV 240
BLAST of CsN08G008830.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6A6NBG5|A0A6A6NBG5_HEVBR (Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_000482 PE=4 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 4.887e-70 Identity = 120/239 (50.21%), Postives = 163/239 (68.20%), Query Frame = 0 Query: 4 SRPATGYP---APTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNF--STNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKG-SGSLVGGARKCRVL 236 SRPATGYP A NGYPPP +A Y A PP + PY Y P R L+R L+ A + VTV+ L I WLV++P PEFH+TS SVSN ST+ ++TGNW+A + YNPNKK+++SY +++S I Y L++T +PPF QDT+ T + A+FSV+DSYV+ +V++ IN +RA GAV F+ R+ A GFK GG+R RRRL+RVWC +V + +++ G SG+L GGARKC+V Sbjct: 5 SRPATGYPVHPAQHPNGYPPPQSATAY-APPPPNNPYYYNQPPAYPNPRAALIRRLIAALIVVTVLFLTILFICWLVIQPHRPEFHVTSFSVSNLNVSTSSQRLTGNWNARFQVYNPNKKLKISYDEIMSSILYKSEILSQTRIPPFKQDTKNHTTMDAEFSVVDSYVDERVVNGINGDRANGAVGFEVRVVADVGFKVGGFRARRRLLRVWCDNVSIGLTANGRSGNLTGGARKCKVF 242
BLAST of CsN08G008830.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8NKQ7|A0A8B8NKQ7_9MYRT (NDR1/HIN1-like protein 26 OS=Rhodamnia argentea OX=178133 GN=LOC115735553 PE=4 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 6.263e-70 Identity = 122/247 (49.39%), Postives = 158/247 (63.97%), Query Frame = 0 Query: 2 ENSRP-ATGYPAP----THNGYPP---PNTAYPYSAAPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQS--QVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNV-SSKGSGSLVGGARKCRVLL 237 +NSRP TGYPAP NGYPP N +YPY+A PPQ Y Y P RR LR +VA +A VI+G L I WLV+RPR+PEF + SL+V+NFS + S V+G+W + NPNKKM++SY D+ S I+Y L+ T LPPF Q TR +T + A F+ +D+YV+ + INAERARGAV F RL A+A FK G WR RRRL+RV+C ++ V + + G+G L GG R+CRV L Sbjct: 3 DNSRPPVTGYPAPPPGAYSNGYPPGAHSNASYPYAAPPPQYANYQY----YAPDRRATFLRYFLVAMIAFFVIIGTVLFIVWLVLRPRLPEFRVQSLTVTNFSVSNSSQHVSGDWLVQFQVANPNKKMKISYADIASSIFYKSESLSATRLPPFDQGTRNQTVVQASFAAVDTYVDGWAVSEINAERARGAVSFQVRLLALARFKAGWWRARRRLIRVFCVNLAVGLPPNNGTGKLTGGVRECRVGL 245
BLAST of CsN08G008830.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7J7E048|A0A7J7E048_TRIWF (Protein YLS9 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW02G00713 PE=4 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 5.449e-68 Identity = 115/240 (47.92%), Postives = 156/240 (65.00%), Query Frame = 0 Query: 4 SRPATGYPAPTHNGYPPP--NTAYPYSAAPPQSQPYSYPPYYQ---PPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQ--VTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVS-SKGSGSLVGGARKCRV 235 SRP TGYP + NGYP P +AYPY A PPQ+QP++Y YY PP R R V + +TVI L I WLV+RPR+PEF + SLSVSNF+ S +TG+W+ ++ YNPN +M +SY DV ++Y +L T +PPF Q + +T + A FS +SYV+R+VLD I+A+RARG V F+ ++ A+ F+ G WR R R++RV+C DVPV ++ S SG LVGGAR+C V Sbjct: 5 SRPVTGYP--SANGYPAPPLGSAYPYQAQPPQNQPHAY--YYNAPPPPDPRLAFYRRFCVIIIGLTVIFATVLFICWLVIRPRVPEFRVDSLSVSNFNVTSSSQTLTGSWNLRLQVYNPNSRMTLSYDDVRPSVFYKTEFLVETRIPPFQQGKKNQTFVDASFSASNSYVDRRVLDGISADRARGTVSFNVKVVAVVKFRTGAWRARARVLRVYCTDVPVGITASSTSGKLVGGARECSV 240
BLAST of CsN08G008830.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7J7DF53|A0A7J7DF53_TRIWF (Protein YLS9 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW07G00489 PE=4 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.447e-65 Identity = 115/240 (47.92%), Postives = 155/240 (64.58%), Query Frame = 0 Query: 4 SRPATGYPAPTHNGYP--PPNTAYPYSAAPPQSQPYSYPPYYQ---PPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQ--VTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVS-SKGSGSLVGGARKCRV 235 SRP TGYP T NGYP PP + YPY A PPQ+ ++Y YY PP R+ R + VA+TVI L I+WL++RP +PEF + SLSVSNF+ S VTG+W ++ YN N++M VSY DV I+Y+ L T +PPF Q + +T + A FS +SYV+R V+D I+A+RARG V F+ ++ A+ F+ G WR R R++RV+C DVPV ++ S SG LVGGAR+CRV Sbjct: 5 SRPVTGYP--TANGYPAPPPGSVYPYQAPPPQNPSHAY--YYNAPPPPDPRSAFFRRFCLIIVALTVIFATVLFIYWLIIRPTVPEFRVDSLSVSNFNVTSSSQTVTGSWYLRLQVYNTNRRMTVSYDDVRPSIFYETESLVETRIPPFQQGKKNQTFVDASFSATNSYVDRWVVDGISADRARGNVSFNVKVVAVVNFRTGAWRARARVLRVYCRDVPVGITASSRSGKLVGGARECRV 240
BLAST of CsN08G008830.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6A2YGF0|A0A6A2YGF0_HIBSY (Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111402pilonHSYRG00431 PE=4 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.507e-62 Identity = 105/237 (44.30%), Postives = 144/237 (60.76%), Query Frame = 0 Query: 2 ENSRPATGYPAPTHNGYPP--PNTAYPYSAAPPQSQPY-SYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRV 235 ++SRP TGYP N Y P P T Y Y+ P PY S PP P LR L+VA +I G L I WLV+RP++P+F + SLS+SNFS +V W+A I+ NPNKK+ VSY +VVS I++ +L+ T + PF Q TR + A +S++DS+V+ KV+D++N ER+ G +KF+ ++ A F+YGGWR RRR + VWC DV V S SG + GG +KC V Sbjct: 3 DSSRPVTGYPVQNLNDYAPTPPTTGYSYARVNPNGHPYYSTPP---PQNPHPTFLRRLLVAVAVFLIIFGAILFIIWLVLRPQLPDFSIQSLSLSNFSAANQRVNATWNAQIQVSNPNKKLSVSYGEVVSSIFHKDYFLSETRIGPFVQGTRSAGAVGASYSLVDSFVDGKVVDAMNEERSGGEMKFNLKVIADVAFQYGGWRGRRRFLTVWCDDVAVTAS---SGKMTGGPKKCSV 233
BLAST of CsN08G008830.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 9.547e-18 Identity = 54/169 (31.95%), Postives = 82/169 (48.52%), Query Frame = 0 Query: 52 LLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIE--AYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFS----VIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDV 214 LL V +++ VILG A LIFWL+VRPR +FH+T S++ F ++ A+ NPNK++ + Y + + YY+G + L PF Q + T L+ F VI + + + L NAER G + + FK G + RR +V C D+ Sbjct: 37 LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTL---NAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDL 202
BLAST of CsN08G008830.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FNH6|NHL3_ARATH (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.525e-10 Identity = 46/182 (25.27%), Postives = 85/182 (46.70%), Query Frame = 0 Query: 61 VAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTN-QSQVTGNWDAAIEAYNPNKKMRVSYYDV-VSGIYYDGNYLTRTPLPPFSQDTRERTPLSAK-----FSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRV 235 + + V+LG A LI WL+ RP +FH+T ++ F+ + + + N D NPN+++ V Y ++ V G Y D + + F Q + T + K ++D + + + +N++ R D +L FK+G ++ R ++ C D+ V ++S + V KC V Sbjct: 53 ITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYR----IDAKLRLKIRFKFGLIKSWRFKPKIKC-DLKVPLTSNSTSGFVFQPTKCDV 229
BLAST of CsN08G008830.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8VZ13|Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 5.278e-10 Identity = 37/161 (22.98%), Postives = 75/161 (46.58%), Query Frame = 0 Query: 73 IFWLVVRPRIPEFHLTSLSVSNFS--TNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGAR 231 I +L +RP+ + + + SV F+ N + + I++YNP K + V Y+ + + + + PF Q + T + + + + + + AE+++G ++ + + A +K +R+RRR ++ C V +NV+ S SL G R Sbjct: 57 ITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVT---SSSLDGFQR 214
BLAST of CsN08G008830.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:11669769-11670500 FORWARD LENGTH=243) HSP 1 Score: 147.902 bits (372), Expect = 1.581e-43 Identity = 100/247 (40.49%), Postives = 147/247 (59.51%), Query Frame = 0 Query: 4 SRPATGYPAPTH-----------NGYPPP--NTAYPYSAAPPQSQPYSYPPYYQP-PTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERA-RGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNV-SSKGSGSLVGGARKCR 234 SRPATGYP P NGYP P TAYPY ++ PYY P P R ++R L + ++LG L IF+L+VRP++P+ +L SLSVSNF+ + +QV+G WD ++ NPN KM + Y + +YY+ L+ T L PF Q +++T ++A SV +YV+ +++DSI ER+ +G V+FD R+ + F+YG +R RRR V V+C DV V V S G G +VG +++C+ Sbjct: 5 SRPATGYPYPYPYPNPQQQQPPTNGYPNPAAGTAYPYQ---------NHNPYYAPQPNPRAVIIRRLFIVFTTFLLLLGLILFIFFLIVRPQLPDVNLNSLSVSNFNVSNNQVSGKWDLQLQFRNPNSKMSLHYETALCAMYYNRVSLSETRLQPFDQGKKDQTVVNATLSVSGTYVDGRLVDSIGKERSVKGNVEFDLRMISYVTFRYGAFR-RRRYVTVYCDDVAVGVPVSSGEGKMVGSSKRCK 241
BLAST of CsN08G008830.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:19446970-19447872 FORWARD LENGTH=300) HSP 1 Score: 95.5153 bits (236), Expect = 4.787e-23 Identity = 62/218 (28.44%), Postives = 99/218 (45.41%), Query Frame = 0 Query: 25 YPYSAAPP-----QSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGN------YLTRTPLPPFSQDTRERTPLSAKFSVIDSY---VERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSS-KGSGSLV 227 YPY+ APP S P P YQ P + +R + + + V+L + I WLV+RP+IP F + + SVSNF+ + W A + N N K++ Y+D + G+ Y N +L P +T++ + + D V V+D + ER G V F R+ FK GW R ++V+C + V G+G+++ Sbjct: 74 YPYAQAPPASYYGSSYPAQQNPVYQRPAS-SGFVRGIFTGLIVLVVLLCISTTITWLVLRPQIPLFSVNNFSVSNFNVTGPVFSAQWTANLTIENQNTKLK-GYFDRIQGLVYHQNAVGEDEFLATAFFQPVFVETKKSVVIGETLTAGDKEQPKVPSWVVDEMKKERETGTVTFSLRMAVWVTFKTDGWAARESGLKVFCGKLKVGFEGISGNGAVL 289
BLAST of CsN08G008830.1 vs. Araport11
Match: | (Symbols: NHL10, ATNHL10, YLS9 | NDR1/HIN1-LIKE, ARABIDOPSIS NDR1/HIN1-LIKE 10, YELLOW-LEAF-SPECIFIC GENE 9 | chr2:15110635-15111318 FORWARD LENGTH=227) HSP 1 Score: 82.4185 bits (202), Expect = 9.826e-19 Identity = 54/169 (31.95%), Postives = 82/169 (48.52%), Query Frame = 0 Query: 52 LLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIE--AYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFS----VIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDV 214 LL V +++ VILG A LIFWL+VRPR +FH+T S++ F ++ A+ NPNK++ + Y + + YY+G + L PF Q + T L+ F VI + + + L NAER G + + FK G + RR +V C D+ Sbjct: 37 LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTL---NAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDL 202
BLAST of CsN08G008830.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:7647056-7647679 REVERSE LENGTH=207) HSP 1 Score: 67.3958 bits (163), Expect = 2.755e-13 Identity = 39/175 (22.29%), Postives = 81/175 (46.29%), Query Frame = 0 Query: 46 PTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFS-TNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVS 219 P RR +L+ + + + + + LI WL +P+ + + + SV NF+ TN + ++ + I+++NPN ++ V Y V + + L + PF Q + + V + + ++ + G + F+ ++A FK G W++ R ++ C V V++S Sbjct: 19 PLRRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATFQFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAVSKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLS 193
BLAST of CsN08G008830.1 vs. Araport11
Match: | (Symbols: NHL3 | NDR1/HIN1-like 3 | chr5:1931016-1931711 REVERSE LENGTH=231) HSP 1 Score: 62.7734 bits (151), Expect = 1.560e-11 Identity = 46/182 (25.27%), Postives = 85/182 (46.70%), Query Frame = 0 Query: 61 VAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTN-QSQVTGNWDAAIEAYNPNKKMRVSYYDV-VSGIYYDGNYLTRTPLPPFSQDTRERTPLSAK-----FSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRV 235 + + V+LG A LI WL+ RP +FH+T ++ F+ + + + N D NPN+++ V Y ++ V G Y D + + F Q + T + K ++D + + + +N++ R D +L FK+G ++ R ++ C D+ V ++S + V KC V Sbjct: 53 ITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYR----IDAKLRLKIRFKFGLIKSWRFKPKIKC-DLKVPLTSNSTSGFVFQPTKCDV 229
BLAST of CsN08G008830.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:2559672-2560337 REVERSE LENGTH=221) HSP 1 Score: 61.2326 bits (147), Expect = 5.401e-11 Identity = 37/161 (22.98%), Postives = 75/161 (46.58%), Query Frame = 0 Query: 73 IFWLVVRPRIPEFHLTSLSVSNFS--TNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGAR 231 I +L +RP+ + + + SV F+ N + + I++YNP K + V Y+ + + + + PF Q + T + + + + + + AE+++G ++ + + A +K +R+RRR ++ C V +NV+ S SL G R Sbjct: 57 ITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVT---SSSLDGFQR 214
BLAST of CsN08G008830.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:19450750-19451376 FORWARD LENGTH=208) HSP 1 Score: 59.6918 bits (143), Expect = 1.443e-10 Identity = 55/205 (26.83%), Postives = 89/205 (43.41%), Query Frame = 0 Query: 52 LLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQ-SQVTGNWDAAIEAYNPNKKMRVSYYD--VVSGIYYDGNYLTRTPLPPFSQDTRE-----------RTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGG-------ARKCRV 235 ++R L A +A VI+ + + W+++RP P F L +V F+ +Q + +T N+ I + NPN K+ + YYD V Y + RT +PP Q +E P++ SV ++ E+ RG V R + +K T + + V C +N+ +K +G LVG A KC V Sbjct: 15 VVRKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTIASRNPNSKIGI-YYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPYNSV-----------ALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAF-INLGNKAAGVLVGDNAVKYTLANKCSV 206
BLAST of CsN08G008830.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:22807440-22808114 REVERSE LENGTH=224) HSP 1 Score: 59.6918 bits (143), Expect = 1.842e-10 Identity = 37/153 (24.18%), Postives = 69/153 (45.10%), Query Frame = 0 Query: 61 VAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSG-IYYDGNYLTRTPLP-PFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWC 211 +++ + LG I W+ ++P P H+ S+S S T + I A+NPN+ + + YYD + G +YY + T L PF QD + + + S V + + +R +G + F ++ ++ FK W ++ + C Sbjct: 49 LSLLLCLGIITFILWISLQPHRPRVHIRGFSISGLSRPDGFETSHISFKITAHNPNQNVGI-YYDSMEGSVYYKEKRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWMEMERDRNQGKIMFRLKVRSMIRFKVYTWHSKSHKMYASC 200
BLAST of CsN08G008830.1 vs. Araport11
Match: | (Symbols: NHL13 | NDR/HIN1-like 13 | chr2:11566383-11567165 FORWARD LENGTH=260) HSP 1 Score: 57.3806 bits (137), Expect = 1.750e-9 Identity = 56/235 (23.83%), Postives = 104/235 (44.26%), Query Frame = 0 Query: 19 PPPNTAYPYSAAPPQSQPYSYPP------YYQPPTRRNN------LLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQ-SQVTGNWDAAIEAYNPNKKMRVSYYDVVSG--IYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVLLD 238 PPP+T Y P+ Q Y PP + Q ++ N + A + V+ G + + +L+ RP P++ + SVS + N S ++ +++ + + N N K+ V YY+ S +YY+ ++ +P F Q + T + S + + + E ++ V F +++A K+G +T +V V C DV V+ + S + +RKC +D Sbjct: 32 PPPST---YVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGV-YYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDC-DVTVDKLTAPSRIV---SRKCSHDVD 258
BLAST of CsN08G008830.1 vs. Araport11
Match: | (Symbols: NHL13 | NDR/HIN1-like 13 | chr2:11566383-11567165 FORWARD LENGTH=260) HSP 1 Score: 57.3806 bits (137), Expect = 1.750e-9 Identity = 56/235 (23.83%), Postives = 104/235 (44.26%), Query Frame = 0 Query: 19 PPPNTAYPYSAAPPQSQPYSYPP------YYQPPTRRNN------LLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQ-SQVTGNWDAAIEAYNPNKKMRVSYYDVVSG--IYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVLLD 238 PPP+T Y P+ Q Y PP + Q ++ N + A + V+ G + + +L+ RP P++ + SVS + N S ++ +++ + + N N K+ V YY+ S +YY+ ++ +P F Q + T + S + + + E ++ V F +++A K+G +T +V V C DV V+ + S + +RKC +D Sbjct: 32 PPPST---YVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGV-YYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDC-DVTVDKLTAPSRIV---SRKCSHDVD 258 The following BLAST results are available for this feature:
BLAST of CsN08G008830.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2025-01-03 (Blastp of Citrus sinensis cv. Newhall T2T v2.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of CsN08G008830.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2025-01-03 (Blastp of Citrus sinensis cv. Newhall T2T v2.0 proteins vs UniProt Swissprot) Total hits: 3 Position : 0 Zoom : x 1
BLAST of CsN08G008830.1 vs. Araport11
Analysis Date: 2025-01-03 (Blastp of Citrus sinensis cv. Newhall T2T v2.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus sinensis cv. Newhall T2T v2.0 proteins
Date Performed: 2025-01-03 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCitSine.Newhall.2.0.CsN08G008830.1 ID=drCitSine.Newhall.2.0.CsN08G008830.1; Name=CsN08G008830.1; organism=Citrus sinensis; type=mRNA; length=762bpback to top protein sequence of drCitSine.Newhall.2.0.CsN08G008830.1 >drCitSine.Newhall.2.0.CsN08G008830.1 ID=drCitSine.Newhall.2.0.CsN08G008830.1; Name=drCitSine.Newhall.2.0.CsN08G008830.1; organism=Citrus sinensis; type=polypeptide; length=254bpback to top mRNA from alignment at Chr08:9927788..9932028- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=4241bp; location=Sequence derived from: Chr08:9927788..9932028- (Citrus sinensisback to top Coding sequence (CDS) from alignment at Chr08:9927788..9932028- >drCitSine.Newhall.2.0.CsN08G008830.1 ID=drCitSine.Newhall.2.0.CsN08G008830.1; Name=CsN08G008830.1; organism=Citrus sinensis; type=CDS; length=762bp; location=Sequence derived from: Chr08:9927788..9932028- (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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