Cs_ont_2g034670.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cs_ont_2g034670.1 vs. DB:SwissProt
Match: DIR19_ARATH (Dirigent protein 19 OS=Arabidopsis thaliana OX=3702 GN=DIR19 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.157e-44 Identity = 66/109 (60.55%), Postives = 87/109 (79.82%), Query Frame = 1 Query: 91 AKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPPTN-TSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGSSITVL 414 +T+ N + KKEKLTHF+++WHDI +GQ+ + +S++ PP T GFG++ MIDNPLT P++SSKMVGRAQGFYA S+EE+GLLMAMNFA ++GKYNGS+ITVL Sbjct: 24 GETLESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTLTPKLSSKMVGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVL 132
BLAST of Cs_ont_2g034670.1 vs. DB:SwissProt
Match: DIR20_ARATH (Dirigent protein 20 OS=Arabidopsis thaliana OX=3702 GN=DIR20 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.274e-40 Identity = 68/110 (61.82%), Postives = 88/110 (80.00%), Query Frame = 1 Query: 88 YAKTMNKNLMGL-KKEKLTHFQIHWHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGSSITVL 414 +A+TM++ L+GL KKEKLTHF+++WHDI SG NPT I + P TN+S FG I+MIDN LTA M+S ++G+AQGFYA A+Q+E+G LMAMNFAF GKYNGS+IT+L Sbjct: 27 FARTMDRKLLGLHKKEKLTHFKVYWHDILSGPNPTSIMIQPPVTNSSY--FGAISMIDNALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITIL 134
BLAST of Cs_ont_2g034670.1 vs. DB:SwissProt
Match: DIR7_ARATH (Dirigent protein 7 OS=Arabidopsis thaliana OX=3702 GN=DIR7 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.280e-34 Identity = 64/138 (46.38%), Postives = 91/138 (65.94%), Query Frame = 1 Query: 1 MVKFLPIFATQIIXXXXXXXXXTKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGSSITVL 414 M K + I TQI+ + ++S+ + +AKT++K GL+KEKLTHF+++WHDI SG NP+ + V+ PP + S+ FG + +IDN LT ++S +VG+AQG YA Q + LM MNFAF GKYNGSSI +L Sbjct: 1 MAKLILIIVTQILLIAAVVSAR---KGENFAKTIDKKHFGLRKEKLTHFRVYWHDILSGSNPSSV-VINPPISNSSF-FGSVTVIDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTGKYNGSSIAIL 133
BLAST of Cs_ont_2g034670.1 vs. DB:SwissProt
Match: DIR3_ARATH (Dirigent protein 3 OS=Arabidopsis thaliana OX=3702 GN=DIR3 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.265e-34 Identity = 59/111 (53.15%), Postives = 83/111 (74.77%), Query Frame = 1 Query: 88 YAKTMNKNLMGL-KKEKLTHFQIHWHDIQSGQNPTPISVVRPPTN-TSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGSSITVL 414 +A+T+N+ +GL KKEKLTH +++WHDI +G+NP+ I + P +S++ FG I MIDN LT ++S +VG+AQG Y A+Q+E+GLLMAMN AF GKYNGS+IT+L Sbjct: 28 FARTINRKHLGLGKKEKLTHLRVYWHDIVTGRNPSSIRIQGPVAKYSSSSYFGSITMIDNALTLDVPINSTVVGQAQGMYVGAAQKEIGLLMAMNLAFKTGKYNGSTITIL 138
BLAST of Cs_ont_2g034670.1 vs. DB:SwissProt
Match: DIR8_ARATH (Dirigent protein 8 OS=Arabidopsis thaliana OX=3702 GN=DIR8 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.133e-30 Identity = 60/139 (43.17%), Postives = 89/139 (64.03%), Query Frame = 1 Query: 1 MVKFLPIFATQIIXXXXXXXXXTKIQVHGYAKTMN-KNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGSSITVL 414 M + IFA QI+ + S ++ +TMN K+L KKEKLTH +++WH+ +G+NP+ + + +P N+S +G I M+D+PLT ++ +VG+AQG Y A+Q E+G LM MNFAF GKYNGS+IT+L Sbjct: 1 MTNLILIFAAQILLFYAVASVGDEL-----GRTMNGKHLGPYKKEKLTHLRVYWHNSVNGRNPSSVMIQQPVLNSSLSG--SITMMDDPLTFDVPRNATVVGQAQGMYVAAAQGEIGFLMVMNFAFTTGKYNGSTITIL 132
BLAST of Cs_ont_2g034670.1 vs. DB:SwissProt
Match: DIR21_ARATH (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.149e-28 Identity = 49/107 (45.79%), Postives = 72/107 (67.29%), Query Frame = 1 Query: 88 YAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVR-PPTNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGSSI 405 ++ T+ G K +KLTH ++HDI SG PT + V P TN+S GFG++ ++D+ LT GPE++S+ VGRAQG YA A Q ++GLLMA N F +GK++ S++ Sbjct: 28 FSTTVKAPYPGHKPDKLTHLHFYFHDIVSGDKPTSVQVANGPTTNSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAFNLVFTKGKFSDSTV 134
BLAST of Cs_ont_2g034670.1 vs. DB:SwissProt
Match: DIR_GLYEC (Pterocarpan synthase 1 OS=Glycyrrhiza echinata OX=46348 GN=PTS1 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.259e-27 Identity = 46/111 (41.44%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 88 YAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPPTNTSTNG--FGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGSSITVL 414 Y ++M+ ++G ++EK TH ++HD+ +G P+ + +V P + N FG + +D+PLT GPE SK+VG+AQG Y SQEE+GL+M M AF +G++NGS++++L Sbjct: 25 YYQSMSPTVLGFQEEKFTHLHFYFHDVVTGPKPSMV-IVAEPNGKAKNSLPFGTVVAMDDPLTVGPESDSKLVGKAQGIYTSISQEEMGLMMVMTMAFSDGEFNGSTLSIL 134
BLAST of Cs_ont_2g034670.1 vs. DB:SwissProt
Match: DIR_SOYBN (Pterocarpan synthase 1 OS=Glycine max OX=3847 GN=PTS1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.329e-26 Identity = 45/110 (40.91%), Postives = 68/110 (61.82%), Query Frame = 1 Query: 88 YAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPPTNTSTN-GFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGSSITVL 414 Y ++ L+G ++E+ TH +HD+ +G P+ + + P FG + +D+PLT GPE SK+VG+AQG Y SQEE+GL+M M AF +G +NGS+I+VL Sbjct: 23 YYSSLTPTLLGFREEQFTHLHFFFHDVVTGPKPSMVFIAEPNGKAKDALPFGTVVAMDDPLTVGPEQDSKLVGKAQGIYTSISQEEMGLMMVMTMAFTDGDFNGSTISVL 132
BLAST of Cs_ont_2g034670.1 vs. DB:SwissProt
Match: DIR11_ARATH (Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.877e-26 Identity = 53/113 (46.90%), Postives = 67/113 (59.29%), Query Frame = 1 Query: 67 TKIQVHGYAKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPP-TNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGSS 402 T Q Y+KT G K +KLTH ++HDI SG PT I V P TN+S FG + ++D P+T GPE+SSK VGRAQG YA + G M NF F EG++NGS+ Sbjct: 29 TVTQSKPYSKT--TPFQGNKPDKLTHLHFYFHDIISGDKPTTIRVAEAPGTNSSATVFGAVLIVDAPVTEGPELSSKEVGRAQGLYASTDMKTFGFTMVFNFVFTEGEFNGST 139
BLAST of Cs_ont_2g034670.1 vs. DB:SwissProt
Match: DIR2_ARATH (Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.646e-25 Identity = 46/106 (43.40%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 91 AKTMNKNLMGLKKEKLTHFQIHWHDIQSGQNPTPISVVRPP-TNTSTNGFGIINMIDNPLTAGPEMSSKMVGRAQGFYALASQEEVGLLMAMNFAFIEGKYNGSSI 405 A + K G K +K TH ++HD+ SG PT + V TN+S FG+I + D+PLT GP+ SSK VGRAQG YAL + + + M N AF G++NGS++ Sbjct: 27 AYSTTKPCQGYKPDKFTHLHFYFHDVISGDKPTAVKVAEARRTNSSNVNFGVIMIADDPLTEGPDPSSKEVGRAQGMYALTAMKNISFTMVFNLAFTAGEFNGSTV 132 The following BLAST results are available for this feature:
BLAST of Cs_ont_2g034670.1 vs. DB:SwissProt
Analysis Date: 2023-02-21 (BLAST: C.sinensis DHSO v3.0) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro: C. sinensis DHSO v3.0
Date Performed: 2023-04-20 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Cs_ont_2g034670.1_Citrus_sinensis_DHSO_v3.0 ID=Cs_ont_2g034670.1_Citrus_sinensis_DHSO_v3.0; Name=Cs_ont_2g034670.1; organism=Citrus sinensis; type=mRNA; length=417bpback to top protein sequence of Cs_ont_2g034670.1_Citrus_sinensis_DHSO_v3.0 >Cs_ont_2g034670.1_Citrus_sinensis_DHSO_v3.0 ID=Cs_ont_2g034670.1_Citrus_sinensis_DHSO_v3.0; Name=Cs_ont_2g034670.1_Citrus_sinensis_DHSO_v3.0; organism=Citrus sinensis; type=polypeptide; length=139bpback to top mRNA from alignment at chr2_v3.0:32159435..32159851+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=417bp; location=Sequence derived from: chr2_v3.0:32159435..32159851+ (Citrus sinensisback to top Coding sequence (CDS) from alignment at chr2_v3.0:32159435..32159851+ >Cs_ont_2g034670.1_Citrus_sinensis_DHSO_v3.0 ID=Cs_ont_2g034670.1_Citrus_sinensis_DHSO_v3.0; Name=Cs_ont_2g034670.1; organism=Citrus sinensis; type=CDS; length=417bp; location=Sequence derived from: chr2_v3.0:32159435..32159851+ (Citrus sinensisback to top |