Csi02G034590.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Csi02G034590.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:16793765-16794889 FORWARD LENGTH=374) HSP 1 Score: 97.8265 bits (242), Expect = 3.369e-24 Identity = 55/169 (32.54%), Postives = 88/169 (52.07%), Query Frame = 0 Query: 1 MDRRTFGLLCELLRSRGL-KATGSLAVEEQVCMFLHTLSHHVKNRTIGSRFFRSGETVSRYFNS------------------------------NCFGALDGTYIRVRVPENDKPRYRTRKGEIATNVLGVCSQDMKFIFVMPGWEGSSSDLRVLRDALNKPTGLKVPH 138 MD+ F LC+LL++RGL + T + +E Q+ +FL + H+++ R + F SGET+SR+FN+ +C G +D +I V V +++ +R G + NVL S D++F +V+ GWEGS+SD +VL AL + L+VP Sbjct: 48 MDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDDPYFKDCVGVVDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQ 216
BLAST of Csi02G034590.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:10992505-10993435 FORWARD LENGTH=148) HSP 1 Score: 76.6406 bits (187), Expect = 6.266e-18 Identity = 47/139 (33.81%), Postives = 76/139 (54.68%), Query Frame = 0 Query: 49 RFFRSGETVSRYFNSNCFGALDGTYIRVRVPENDKPRYRTRKGEIATNVLGVCSQDMKFIFVMPGWEGSSSDLRVLRDALNKPTG-LKVP-HELIDLPNNEVEDNDSISSIKASDQW----TSWRNDLATTMYNNWLGN 181 R R + YF +C GA+D T+I V + P +R RKG+I+ N+L C+ D++F++V+ GWEGS+ D +VL DAL + + L VP + E ++++ + DQ WR +A+ M+NN + N Sbjct: 10 RKIRESTRLYPYF-KDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHDSKVLNDALTRNSNRLPVPEEDESAEEVVEEVNDNNDEVLTTQDQQREYANQWRETIASNMWNNSIEN 147
BLAST of Csi02G034590.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:10779003-10780218 FORWARD LENGTH=296) HSP 1 Score: 62.7734 bits (151), Expect = 7.773e-12 Identity = 47/153 (30.72%), Postives = 69/153 (45.10%), Query Frame = 0 Query: 1 MDRRTFGLLCELLRSR-GLKATGSLAVEEQVCMFLHTLSHHVKNRTIGSRFFRSGETVSRYFNS--NCFGALDGTYIRVRVPE---------NDKPRY----RTRKGEIATNVLGVCSQDMKFIFVMPGWEGSSSDLRVLRDALNKPTGLKVP 137 M F LCE+L + GL+++ +++++E V +FL + + R I RF + ET+ R F+ L YIR R E D RY G + NVL +C DM F + G GS+ D RVL A++ VP Sbjct: 30 MSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDIALRFGHAQETIWRKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYWPFLMDLLGIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAISDDPLFHVP 182
BLAST of Csi02G034590.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5C7HM07|A0A5C7HM07_9ROSI (DDE Tnp4 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018639 PE=4 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 8.383e-67 Identity = 111/172 (64.53%), Postives = 124/172 (72.09%), Query Frame = 0 Query: 1 MDRRTFGLLCELLRSRG-LKATGSLAVEEQVCMFLHTLSHHVKNRTIGSRFFRSGETVSRYFNS--------------------------------NCFGALDGTYIRVRVPENDKPRYRTRKGEIATNVLGVCSQDMKFIFVMPGWEGSSSDLRVLRDALNKPTGLKVPHE 139 MDRRTFG+LCELLR+ G LK G + +EEQVC FLH L+HHVKNRTIG RF RSGETVSRYFNS C GALDGT+I+VRV E DKPRYRTRKGE+ATNVLGVCS+DMKFIFV PGWEGS+SD RVLRDAL++PTGLKVP+E Sbjct: 1 MDRRTFGILCELLRTDGKLKKDGLVTIEEQVCSFLHVLAHHVKNRTIGHRFNRSGETVSRYFNSVLNGIIRLQGSLLQKPNPIPNDCTDARWKWFKGCLGALDGTHIKVRVSEKDKPRYRTRKGEVATNVLGVCSRDMKFIFVFPGWEGSASDSRVLRDALSRPTGLKVPNE 172
BLAST of Csi02G034590.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P5SL65|A0A6P5SL65_PRUAV (Protein ALP1-like isoform X1 OS=Prunus avium OX=42229 GN=LOC110757082 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.507e-65 Identity = 109/170 (64.12%), Postives = 124/170 (72.94%), Query Frame = 0 Query: 1 MDRRTFGLLCELLRSRG-LKATGSLAVEEQVCMFLHTLSHHVKNRTIGSRFFRSGETVSRYFNS--------------------------------NCFGALDGTYIRVRVPENDKPRYRTRKGEIATNVLGVCSQDMKFIFVMPGWEGSSSDLRVLRDALNKPTGLKVP 137 MDRRTFGLLC+LLR G +K G +++EEQVC+FLH L+ HVKNRTIGSRFFRSGET+SRYFNS NC GALDGTYI+VRV E DKPRYRTRKGEIATNVLGVCS+DM+FIFV+PGWEGS+SD RVLRDA+ +P GLKVP Sbjct: 75 MDRRTFGLLCDLLRQDGRVKNDGLVSLEEQVCVFLHVLAQHVKNRTIGSRFFRSGETISRYFNSVLQGVLRLQDILLKVPDPVLDNCEDSRWRRFKNCLGALDGTYIKVRVAEIDKPRYRTRKGEIATNVLGVCSRDMQFIFVLPGWEGSASDSRVLRDAITRPNGLKVP 244
BLAST of Csi02G034590.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA39T1V8|A0AA39T1V8_ACESA (Myb/SANT-like domain-containing protein OS=Acer saccharum OX=4024 GN=LWI29_022476 PE=4 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 5.777e-64 Identity = 106/173 (61.27%), Postives = 124/173 (71.68%), Query Frame = 0 Query: 1 MDRRTFGLLCELLRSRG-LKATGSLAVEEQVCMFLHTLSHHVKNRTIGSRFFRSGETVSRYFNS--------------------------------NCFGALDGTYIRVRVPENDKPRYRTRKGEIATNVLGVCSQDMKFIFVMPGWEGSSSDLRVLRDALNKPTGLKVPHEL 140 MDRRTF +LCELLR+ G LK G ++VEEQVCMFLH L+HHVKNRTI SRF+RSGET+SRYFNS NC GALDGTYI+V VPE DKPR+R+RKGEIATNVLG CS+DM F FV PGWEGS+SD RVL DAL++PTG+K+P+E+ Sbjct: 1 MDRRTFAVLCELLRNTGRLKTNGLVSVEEQVCMFLHILAHHVKNRTIRSRFYRSGETISRYFNSVLCAVLQLHNHLLVSPDPVAENCSDERWKWFKNCLGALDGTYIKVHVPEVDKPRFRSRKGEIATNVLGACSRDMMFTFVFPGWEGSASDSRVLHDALSRPTGMKIPNEM 173
BLAST of Csi02G034590.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA39SHN9|A0AA39SHN9_ACESA (DDE Tnp4 domain-containing protein OS=Acer saccharum OX=4024 GN=LWI29_006461 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 7.257e-64 Identity = 105/170 (61.76%), Postives = 121/170 (71.18%), Query Frame = 0 Query: 1 MDRRTFGLLCELLRSRG-LKATGSLAVEEQVCMFLHTLSHHVKNRTIGSRFFRSGETVSRYFNS--------------------------------NCFGALDGTYIRVRVPENDKPRYRTRKGEIATNVLGVCSQDMKFIFVMPGWEGSSSDLRVLRDALNKPTGLKVP 137 MDRRTF +LCELLR+ G LK G ++VEEQVCMFLH L+HHVKNRTI SRF+RSGET+SRYFNS NC GALDGTYI+V VPE DKPR+R+RKGEIATNVLG CS+DM F FV PGWEGS+SD RVL DAL++PTG+K+P Sbjct: 1 MDRRTFAVLCELLRNTGRLKTNGLVSVEEQVCMFLHILAHHVKNRTIRSRFYRSGETISRYFNSVLCAVLQLHNHLLVSPDPVAKNCSDERWKWFKNCLGALDGTYIKVHVPEVDKPRFRSRKGEIATNVLGACSRDMMFTFVFPGWEGSASDSRVLYDALSRPTGMKIP 170
BLAST of Csi02G034590.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P3Z3M1|A0A6P3Z3M1_ZIZJJ (Protein ALP1-like OS=Ziziphus jujuba OX=326968 GN=LOC107406113 PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.933e-63 Identity = 102/170 (60.00%), Postives = 122/170 (71.76%), Query Frame = 0 Query: 1 MDRRTFGLLCELLRSRG-LKATGSLAVEEQVCMFLHTLSHHVKNRTIGSRFFRSGETVSRYFNS--------------------------------NCFGALDGTYIRVRVPENDKPRYRTRKGEIATNVLGVCSQDMKFIFVMPGWEGSSSDLRVLRDALNKPTGLKVP 137 MDRRTF +LC LLR G +K G++ +EEQVC+FLH ++HH KNRTI SRF+RSGET+SRYFNS NC GALDGTYI+V+VPE DKPRYRTRKGEIATNVLGVC+ +M+FIFV+PGWEGS+SD RVLRDA+++P GLKVP Sbjct: 67 MDRRTFVILCRLLRQDGYVKRDGTVTLEEQVCIFLHIIAHHTKNRTIISRFYRSGETISRYFNSVLNGVLRLHSILLRHPEPVSDNCSDDRWKMFKNCLGALDGTYIKVKVPEIDKPRYRTRKGEIATNVLGVCNPNMEFIFVLPGWEGSASDSRVLRDAISRPNGLKVP 236
BLAST of Csi02G034590.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5C7ITC3|A0A5C7ITC3_9ROSI (Myb/SANT-like domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000663 PE=4 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.352e-63 Identity = 108/170 (63.53%), Postives = 122/170 (71.76%), Query Frame = 0 Query: 1 MDRRTFGLLCELLRSRG-LKATGSLAVEEQVCMFLHTLSHHVKNRTIGSRFFRSGETVSRYFNS--------------------------------NCFGALDGTYIRVRVPENDKPRYRTRKGEIATNVLGVCSQDMKFIFVMPGWEGSSSDLRVLRDALNKPTGLKVP 137 MDRRTF +LCELLR G LK G ++VEEQVCMFLH L+HHVKNRTI +RF RSGETVSRYFNS NC GALDGT+I+V VPE DKPR+R+RKGEIATNVLGVCS+DM F FV+PGWEGS+SD RVLRDAL++PTGLKVP Sbjct: 1 MDRRTFAVLCELLRGTGRLKIDGLVSVEEQVCMFLHILAHHVKNRTIHNRFQRSGETVSRYFNSVLCAVLQLHNILLISPDPVPENCTDEKWKWFKNCLGALDGTFIQVHVPEVDKPRFRSRKGEIATNVLGVCSRDMIFTFVLPGWEGSASDSRVLRDALSRPTGLKVP 170
BLAST of Csi02G034590.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA39W7Y1|A0AA39W7Y1_ACESA (Myb/SANT-like domain-containing protein OS=Acer saccharum OX=4024 GN=LWI29_000578 PE=4 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.461e-63 Identity = 108/170 (63.53%), Postives = 122/170 (71.76%), Query Frame = 0 Query: 1 MDRRTFGLLCELLRSRG-LKATGSLAVEEQVCMFLHTLSHHVKNRTIGSRFFRSGETVSRYFNS--------------------------------NCFGALDGTYIRVRVPENDKPRYRTRKGEIATNVLGVCSQDMKFIFVMPGWEGSSSDLRVLRDALNKPTGLKVP 137 MDRRTF +LCELLR G LK G ++VEEQVCMFLH L+HHVKNRTI +RF RSGETVSRYFNS NC GALDGT+I+V VPE DKPR+R+RKGEIATNVLGVCS+DM F FV+PGWEGS+SD RVLRDAL++PTGLKVP Sbjct: 1 MDRRTFAVLCELLRGTGRLKIDGLVSVEEQVCMFLHILAHHVKNRTIHNRFQRSGETVSRYFNSVLCAVLQLHNILLISPDPVPENCTDEKWKWFKNCLGALDGTFIQVHVPEVDKPRFRSRKGEIATNVLGVCSRDMIFTFVLPGWEGSASDSRVLRDALSRPTGLKVP 170
BLAST of Csi02G034590.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA39T077|A0AA39T077_ACESA (Myb/SANT-like domain-containing protein OS=Acer saccharum OX=4024 GN=LWI29_006626 PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 6.320e-63 Identity = 107/170 (62.94%), Postives = 121/170 (71.18%), Query Frame = 0 Query: 1 MDRRTFGLLCELLRSRG-LKATGSLAVEEQVCMFLHTLSHHVKNRTIGSRFFRSGETVSRYFNS--------------------------------NCFGALDGTYIRVRVPENDKPRYRTRKGEIATNVLGVCSQDMKFIFVMPGWEGSSSDLRVLRDALNKPTGLKVP 137 MDRRTF +LCELLR G LK G ++VEEQVCMFLH L+HHVKNRTI +RF RSGETVSRYFNS NC GALD T+I+V VPE DKPR+R+RKGEIATNVLGVCS+DM F FV+PGWEGS+SD RVLRDAL++PTGLKVP Sbjct: 1 MDRRTFAVLCELLRGTGRLKIDGLVSVEEQVCMFLHILAHHVKNRTIHNRFQRSGETVSRYFNSVLCAVLQLHNILLISPDPVPENCTDEKWKWFKNCLGALDETFIQVHVPEVDKPRFRSRKGEIATNVLGVCSRDMIFTFVLPGWEGSASDSRVLRDALSRPTGLKVP 170
BLAST of Csi02G034590.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA39VH77|A0AA39VH77_ACESA (DDE Tnp4 domain-containing protein OS=Acer saccharum OX=4024 GN=LWI29_026372 PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.969e-62 Identity = 104/170 (61.18%), Postives = 120/170 (70.59%), Query Frame = 0 Query: 1 MDRRTFGLLCELLR-SRGLKATGSLAVEEQVCMFLHTLSHHVKNRTIGSRFFRSGETVSRYFNS--------------------------------NCFGALDGTYIRVRVPENDKPRYRTRKGEIATNVLGVCSQDMKFIFVMPGWEGSSSDLRVLRDALNKPTGLKVP 137 MDRRTF +LCELLR +R LK G ++VEEQV MFLH L+HHVKNRTI SRF+RSGET+SRYFNS NC GALDGTYI+V VPE DKPR+R+RKGEIATNVLG CS+DM F FV PGWEGS+SD RVL DAL++PTG+K+P Sbjct: 1 MDRRTFAVLCELLRNTRRLKTNGLVSVEEQVYMFLHILAHHVKNRTIRSRFYRSGETISRYFNSVLCAVLQLHNHLLVSPDPVAENCSDERWKWFKNCLGALDGTYIKVHVPEVDKPRFRSRKGEIATNVLGACSRDMMFTFVFPGWEGSASDSRVLHDALSRPTGMKIP 170
BLAST of Csi02G034590.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5C7J0G5|A0A5C7J0G5_9ROSI (DDE Tnp4 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002715 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.979e-62 Identity = 107/172 (62.21%), Postives = 120/172 (69.77%), Query Frame = 0 Query: 1 MDRRTFGLLCELLRSR-GLKATGSLAVEEQVCMFLHTLSHHVKNRTIGSRFFRSGETVSRYFNS--------------------------------NCFGALDGTYIRVRVPENDKPRYRTRKGEIATNVLGVCSQDMKFIFVMPGWEGSSSDLRVLRDALNKPTGLKVPHE 139 MDRRTFG+LCELLR+ LK G + +EEQVC FLH L+HHVKN TIG RF RSGETVSRYFNS C GALD T+I+VRV E DKPRYRTRK E+ATNVLGVCS+DMKFIFV PGWEGS+SD RVLRDAL++PTGLKVP+E Sbjct: 75 MDRRTFGILCELLRTDDKLKKDGLVTIEEQVCSFLHVLAHHVKNCTIGHRFNRSGETVSRYFNSVLNGIIRLQGSLLQKPNPIPNDCTDARWKWFKGCLGALDETHIKVRVSEKDKPRYRTRKCEVATNVLGVCSRDMKFIFVFPGWEGSASDSRVLRDALSRPTGLKVPNE 246 The following BLAST results are available for this feature:
BLAST of Csi02G034590.1 vs. Araport11
Analysis Date: 2024-07-19 (Blastp of Citrus sinensis cv. Neixiu v1.0 proteins vs Araport11) Total hits: 3 Position : 0 Zoom : x 1
BLAST of Csi02G034590.1 vs. Araport11
Analysis Date: 2024-07-19 (Blastp of Citrus sinensis cv. Neixiu v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Csi02G034590.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-19 (Blastp of Citrus sinensis cv. Neixiu v1.0 proteins vs UniProt TrEMBL ) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus sinensis cv. Neixiu v1.0 proteins
Date Performed: 2024-07-19 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCitSine.Neixiu.1.0.Csi02G034590.1 ID=drCitSine.Neixiu.1.0.Csi02G034590.1; Name=Csi02G034590.1; organism=Citrus sinensis; type=mRNA; length=564bpback to top protein sequence of drCitSine.Neixiu.1.0.Csi02G034590.1 >drCitSine.Neixiu.1.0.Csi02G034590.1 ID=drCitSine.Neixiu.1.0.Csi02G034590.1; Name=drCitSine.Neixiu.1.0.Csi02G034590.1; organism=Citrus sinensis; type=polypeptide; length=187bpback to top mRNA from alignment at Chr02:32103727..32104863- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1137bp; location=Sequence derived from: Chr02:32103727..32104863- (Citrus sinensisback to top Coding sequence (CDS) from alignment at Chr02:32103727..32104863- >drCitSine.Neixiu.1.0.Csi02G034590.1 ID=drCitSine.Neixiu.1.0.Csi02G034590.1; Name=Csi02G034590.1; organism=Citrus sinensis; type=CDS; length=564bp; location=Sequence derived from: Chr02:32103727..32104863- (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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