Egl044200.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Egl044200.1 vs. ExPASy TrEMBL
Match: V4U946|V4U946_CITCL (Wound-responsive family protein OS=Citrus clementina OX=85681 GN=CICLE_v10017300mg PE=4 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 6.197e-59 Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0 Query: 1 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSPSSSSSALVSSKLMRDPKAKQSEESLRTVMYLSCWGPN 94 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSS SSSSSA+VSSKLMRDPKAKQSEESLRTVMYLSCWGPN Sbjct: 1 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSSSSSSSAVVSSKLMRDPKAKQSEESLRTVMYLSCWGPN 94
BLAST of Egl044200.1 vs. ExPASy TrEMBL
Match: A0A067D3I1|A0A067D3I1_CITSI (Wound-responsive family protein OS=Citrus sinensis OX=2711 GN=CISIN_1g039583mg PE=4 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 6.197e-59 Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0 Query: 1 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSPSSSSSALVSSKLMRDPKAKQSEESLRTVMYLSCWGPN 94 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSS SSSSSA+VSSKLMRDPKAKQSEESLRTVMYLSCWGPN Sbjct: 1 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSSSSSSSAVVSSKLMRDPKAKQSEESLRTVMYLSCWGPN 94
BLAST of Egl044200.1 vs. ExPASy TrEMBL
Match: A0A067EX56|A0A067EX56_CITSI (Wound-responsive family protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034419mg PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.206e-55 Identity = 91/95 (95.79%), Postives = 92/95 (96.84%), Query Frame = 0 Query: 1 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSPSSSSS-ALVSSKLMRDPKAKQSEESLRTVMYLSCWGPN 94 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSS SSSSS A+VSSKLMRDPKAKQSEESLRTVMYLSCW PN Sbjct: 1 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSSSSSSSAAVVSSKLMRDPKAKQSEESLRTVMYLSCWCPN 95
BLAST of Egl044200.1 vs. ExPASy TrEMBL
Match: A0A5N5J4G8|A0A5N5J4G8_9ROSI (Wound-responsive family protein OS=Salix brachista OX=2182728 GN=DKX38_029852 PE=4 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.840e-40 Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = 0 Query: 1 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSPSSSSSALVSSKLMRDPKAKQSEESLRTVMYLSCWGP 93 M ST AWMVA S+AAVEAMKDQGFCRWNYT+RSLHQHAKN +RS+ +KKLSSP+S+ +VSSK+ + KAKQSEESLRTVMYLSCWGP Sbjct: 1 MRSTGEAWMVAFSIAAVEAMKDQGFCRWNYTIRSLHQHAKNKVRSTT--KAKKLSSPTSN---VVSSKVCENQKAKQSEESLRTVMYLSCWGP 88
BLAST of Egl044200.1 vs. ExPASy TrEMBL
Match: A0A836XQC6|A0A836XQC6_9ROSI (2-nonaprenyl-3-methyl-6-methoxy-1 benzoquinol hydroxylase OS=Salix suchowensis OX=1278906 GN=IMY05_019G0113400 PE=4 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.557e-40 Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = 0 Query: 1 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSPSSSSSALVSSKLMRDPKAKQSEESLRTVMYLSCWGP 93 M ST AWMVA S+AAVEAMKDQGFCRWNYT+RSLHQHAKN +RS+ +KKLSSP+S+ +VSSK+ + KAKQSEESLRTVMYLSCWGP Sbjct: 1 MRSTGEAWMVAFSIAAVEAMKDQGFCRWNYTIRSLHQHAKNKVRSTT--KAKKLSSPTSN---VVSSKVWENQKAKQSEESLRTVMYLSCWGP 88
BLAST of Egl044200.1 vs. ExPASy TrEMBL
Match: A0A8T2WEK8|A0A8T2WEK8_POPDE (Wound-responsive family protein OS=Populus deltoides OX=3696 GN=H0E87_030334 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.092e-40 Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = 0 Query: 1 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSPSSSSSALVSSKLMRDPKAKQSEESLRTVMYLSCWGP 93 MSSTS+AWMVA +AAVEAMKDQGFCRWNYT+RSLH HAKN +RS +KKLSSP+S+ +VSSK+ + KAKQSEESLRTVMYLSCWGP Sbjct: 1 MSSTSKAWMVAFGIAAVEAMKDQGFCRWNYTIRSLHHHAKNKVRS--MSKAKKLSSPTSN---VVSSKVRENQKAKQSEESLRTVMYLSCWGP 88
BLAST of Egl044200.1 vs. ExPASy TrEMBL
Match: A0A836DEX9|A0A836DEX9_9ROSI (2-nonaprenyl-3-methyl-6-methoxy-1 benzoquinol hydroxylase OS=Salix suchowensis OX=1278906 GN=IMY05_019G0112600 PE=4 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.018e-39 Identity = 67/93 (72.04%), Postives = 77/93 (82.80%), Query Frame = 0 Query: 1 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSPSSSSSALVSSKLMRDPKAKQSEESLRTVMYLSCWGP 93 M ST AWMVA S+AAVEAMKDQGF RWNYT+RSLHQHAKN +RS+ +KKLSSP+S+ +VSSK+ + KAKQSEESLRTVMYLSCWGP Sbjct: 1 MRSTGEAWMVAVSIAAVEAMKDQGFERWNYTIRSLHQHAKNKVRSTT--KTKKLSSPTSN---VVSSKVRENQKAKQSEESLRTVMYLSCWGP 88
BLAST of Egl044200.1 vs. ExPASy TrEMBL
Match: A0A5J5AAH5|A0A5J5AAH5_9ASTE (Wound-responsive family protein OS=Nyssa sinensis OX=561372 GN=F0562_008360 PE=4 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.573e-39 Identity = 72/94 (76.60%), Postives = 81/94 (86.17%), Query Frame = 0 Query: 1 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSPSSSSSALVSSKLMRDPKAKQSEESLRTVMYLSCWGPN 94 M+STSRAW+VA SV VEA+KDQGFCRWNYT+RS+HQHAKNN+R SVSQ +KKL S SSSA+VS+K RD KAKQSEESLR VMYLSCWGPN Sbjct: 102 MTSTSRAWIVAGSVGLVEALKDQGFCRWNYTIRSIHQHAKNNLR-SVSQ-AKKL---SPSSSAMVSNK-ARDEKAKQSEESLRKVMYLSCWGPN 189 HSP 2 Score: 113.62 bits (283), Expect = 1.380e-29 Identity = 64/88 (72.73%), Postives = 74/88 (84.09%), Query Frame = 0 Query: 1 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSPSSSSSALVSSKLMRDPKAKQSEESLRTVMYL 88 MSSTS+AW+VAASV VEA+KDQGFCRWNYT+RS+HQHAKNN+R SVSQ +KKL S SS A+VS+K RD KAKQSEESLR V+ L Sbjct: 1 MSSTSKAWIVAASVGLVEALKDQGFCRWNYTIRSIHQHAKNNLR-SVSQ-AKKL---SPSSYAMVSNK-ARDEKAKQSEESLRKVINL 82
BLAST of Egl044200.1 vs. ExPASy TrEMBL
Match: U5FJ43|U5FJ43_POPTR (Wound-responsive family protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G116500 PE=4 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.339e-39 Identity = 67/93 (72.04%), Postives = 77/93 (82.80%), Query Frame = 0 Query: 1 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSPSSSSSALVSSKLMRDPKAKQSEESLRTVMYLSCWGP 93 MSSTS+AWMVA +AAVEAMKDQGFCRWNYT+R LH HAKN +RS +KKLSSP+S+ +VSSK+ + KAKQSEESLRTVMYLSCWGP Sbjct: 1 MSSTSKAWMVAFGIAAVEAMKDQGFCRWNYTIRLLHHHAKNKVRS--MSKAKKLSSPTSN---VVSSKVRENQKAKQSEESLRTVMYLSCWGP 88
BLAST of Egl044200.1 vs. ExPASy TrEMBL
Match: A0A3N7HDZ5|A0A3N7HDZ5_POPTR (Wound-responsive family protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G116932 PE=4 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.339e-39 Identity = 66/94 (70.21%), Postives = 80/94 (85.11%), Query Frame = 0 Query: 1 MSSTSRAWMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSPSSSSSALVSSKLMRDPKAKQSEESLRTVMYLSCWGPN 94 MSS S+AW+VAA++ VEA+KDQGFCRWNYTLRSLHQHAKN++ S+SQ++KKL SSSA++SSK ++ KAKQSEESLR VMYLSCWGPN Sbjct: 1 MSSASKAWLVAAAIGGVEALKDQGFCRWNYTLRSLHQHAKNHV-GSISQANKKL---PHSSSAIISSKF-KEEKAKQSEESLRKVMYLSCWGPN 89
BLAST of Egl044200.1 vs. Araport11
Match: | (Symbols: WIP4 | Wound-induced polypeptide 4 | chr4:6374805-6375077 FORWARD LENGTH=90) HSP 1 Score: 105.531 bits (262), Expect = 3.344e-31 Identity = 61/96 (63.54%), Postives = 74/96 (77.08%), Query Frame = 0 Query: 1 MSSTSRAWMVAASVAAVEAMKDQ-GFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSPSSSSSALVSSKLMRDPKAKQSEESLRTVMYLSCWGPN* 95 MSSTS+AW VA S+ AVEA+KDQ G CRWNY LRS++QH +NN+RS VSQ K+ SS S S++ S + KAK++EESLRTVMYLSCWGPN* Sbjct: 1 MSSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRS-VSQG-KRFSSSSVSAAVTSSGE---SEKAKKAEESLRTVMYLSCWGPN* 91
BLAST of Egl044200.1 vs. Araport11
Match: | (Symbols: WIP3 | Wound-induced polypeptide 3 | chr4:6373226-6373477 REVERSE LENGTH=83) HSP 1 Score: 103.219 bits (256), Expect = 2.272e-30 Identity = 58/96 (60.42%), Postives = 70/96 (72.92%), Query Frame = 0 Query: 1 MSSTSRAWMVAASVAAVEAMKDQ-GFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSPSSSSSALVSSKLMRDPKAKQSEESLRTVMYLSCWGPN* 95 MSS S+ WMVAAS+ AVEA+KDQ G CRWNY +RS +Q+ +NN+RS VSQ+ KKLSS S + K KQ+EESLRTVMYLSCWGP+* Sbjct: 1 MSSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRS-VSQA-KKLSSSS----------IDYTNKTKQAEESLRTVMYLSCWGPS* 84
BLAST of Egl044200.1 vs. Araport11
Match: | (Symbols: WIP5 | Wound-induced polypeptide 5 | chr4:16135465-16135752 FORWARD LENGTH=95) HSP 1 Score: 58.5362 bits (140), Expect = 1.618e-12 Identity = 35/87 (40.23%), Postives = 47/87 (54.02%), Query Frame = 0 Query: 8 WMVAASVAAVEAMKDQGFCRWNYTLRSLHQHAKNNIRSSVSQSSKKLSSPSSSSSALVSSKLMRDPKAKQSEESLRTVMYLSCWGPN 94 W VA ++AAVE +KDQG RWNY R LH+ A +R+ S + SSS++++ S L P E S M LSC+GP Sbjct: 9 WAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRSKPLSTTP----FETSFEKAMGLSCFGPT 91 The following BLAST results are available for this feature:
BLAST of Egl044200.1 vs. ExPASy TrEMBL
Analysis Date: 2024-02-02 (Blastp of Citrus australasica cv. AZM v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Egl044200.1 vs. ExPASy TrEMBL
Analysis Date: 2024-02-02 (Blastp of Citrus australasica cv. AZM v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Egl044200.1 vs. Araport11
Analysis Date: 2024-02-02 (Blastp of Citrus australasica cv. AZM v1.0 proteins vs Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus australasica cv. AZM v1.0 proteins
Date Performed: 2024-02-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Egl044200.1-AZM_v1 ID=Egl044200.1-AZM_v1; Name=Egl044200.1; organism=Citrus australasica; type=mRNA; length=285bpback to top protein sequence of Egl044200.1-AZM_v1 >Egl044200.1-AZM_v1 ID=Egl044200.1-AZM_v1; Name=Egl044200.1-AZM_v1; organism=Citrus australasica; type=polypeptide; length=95bpback to top mRNA from alignment at contig106:1478460..1478977- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=518bp; location=Sequence derived from: contig106:1478460..1478977- (Citrus australasicaback to top Coding sequence (CDS) from alignment at contig106:1478460..1478977- >Egl044200.1-AZM_v1 ID=Egl044200.1-AZM_v1; Name=Egl044200.1; organism=Citrus australasica; type=CDS; length=285bp; location=Sequence derived from: contig106:1478460..1478977- (Citrus australasicaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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