Egl100000.1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Egl100000.1 vs. ExPASy TrEMBL
Match: A0A067G8P1|A0A067G8P1_CITSI (DNA-directed RNA polymerase (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g046830mg PE=3 SV=1) HSP 1 Score: 458.373 bits (1178), Expect = 7.978e-158 Identity = 225/243 (92.59%), Postives = 227/243 (93.42%), Query Frame = 0 Query: 1 MAEPQNRPPSTICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 MAE QNRPPSTI V MLSRTSAKGGSS QYI ATLPYIRTEIPIII+FRALGFTAD+DILEHI YDFQDTQMMELLRPSLEEAFFIQNQQ YIGKRGATVGVTREK IKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAED RDHYGNKRLDLAGPLLGGLFR LFRKLTGDVRSYVQKCVDN KDVN QFAIKAKTITGGLKYSLAT NWGQGNAAGTRAGVSQV Sbjct: 203 MAESQNRPPSTIFVPMLSRTSAKGGSSGQYIHATLPYIRTEIPIIILFRALGFTADEDILEHICYDFQDTQMMELLRPSLEEAFFIQNQQ----YIGKRGATVGVTREKMIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRTLFRKLTGDVRSYVQKCVDNGKDVNLQFAIKAKTITGGLKYSLATGNWGQGNAAGTRAGVSQV 441
BLAST of Egl100000.1 vs. ExPASy TrEMBL
Match: Q1L5B7|Q1L5B7_9ERIC (DNA-directed RNA polymerase (Fragment) OS=Camellia japonica OX=4443 GN=RPB2 PE=3 SV=1) HSP 1 Score: 453.366 bits (1165), Expect = 2.353e-157 Identity = 219/243 (90.12%), Postives = 227/243 (93.42%), Query Frame = 0 Query: 1 MAEPQNRPPSTICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 MAE QNRPPS++ V+MLSRTSAKGGSS QYIRATLPYIRTEIPIIIVFRALGF ADKDILEHI YDF DTQMMELLRPSLEEAF IQNQQVALDYIGKRGA+VGVT+EKRIKYAKEILQKEMLPHVG G++CETKKAYYFG+IIHRLLLCALGRRAED RDHYGNKRLDLAGPLLGGLFRMLFRKLT DVR YVQKCVDN KDVN QFAIKAKTIT GLKYSLAT NWGQ NAAGTRAGVSQV Sbjct: 126 MAESQNRPPSSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGASVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQV 368
BLAST of Egl100000.1 vs. ExPASy TrEMBL
Match: Q1L5A9|Q1L5A9_9MAGN (DNA-directed RNA polymerase (Fragment) OS=Liquidambar acalycina OX=63358 GN=RPB2 PE=3 SV=1) HSP 1 Score: 452.21 bits (1162), Expect = 2.684e-156 Identity = 219/243 (90.12%), Postives = 227/243 (93.42%), Query Frame = 0 Query: 1 MAEPQNRPPSTICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 MAE QNRPPS++ V+MLSRTSAKGGSS QYIRATLPYIRTEIPIIIVFRALGF ADKDILEHI YDF DTQMMELLRPSLEEAF IQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVG G++CETKKAYYFG+IIHRLLLCALGRRAED R HYGNKRLDLAGPLLGGLFRMLFRKLT DVR+YVQKCVDN KDVN QFAIKAKTIT GLKYSLAT NWGQ NAAGTRAGVSQV Sbjct: 126 MAESQNRPPSSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRAHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQV 368
BLAST of Egl100000.1 vs. ExPASy TrEMBL
Match: Q1L5A8|Q1L5A8_9MAGN (DNA-directed RNA polymerase (Fragment) OS=Nymphaea colorata OX=210225 GN=RPB2 PE=2 SV=1) HSP 1 Score: 451.055 bits (1159), Expect = 3.467e-156 Identity = 216/243 (88.89%), Postives = 227/243 (93.42%), Query Frame = 0 Query: 1 MAEPQNRPPSTICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 MAE QNRPPS++ V+MLSRTSAKGGSS QYIRATLPYIRTEIPIIIVFRALGF ADKDILEHI YDF DTQMME+LRPSLEEAF IQNQQVALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVG G++CETKKAYYFG+IIHRLLLCALGRR ED RDHYGNKRLDLAGPLLGGLFRMLFRKLT DV++YVQKCVDN KDVN QFAIKAKTIT GLKYSLAT NWGQ NAAGTRAGVSQV Sbjct: 126 MAESQNRPPSSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEMLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKTYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQV 368
BLAST of Egl100000.1 vs. ExPASy TrEMBL
Match: Q1L6C9|Q1L6C9_GUNCH (DNA-directed RNA polymerase (Fragment) OS=Gunnera chilensis OX=130722 GN=RPB2 PE=3 SV=1) HSP 1 Score: 446.432 bits (1147), Expect = 4.006e-154 Identity = 214/243 (88.07%), Postives = 226/243 (93.00%), Query Frame = 0 Query: 1 MAEPQNRPPSTICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 MAE QNRPPS++ V+MLSR SAKGG+S QYIRATLPYIRTEIPIIIVFRALGF ADKDILEHI Y+F DTQMMELLRPSLEEAF IQNQQVALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVG G++CETKKAYYFG+IIHRLLLCA+GRR ED RDHYGNKRLDLAGPLLGGLFRMLFRKLT DVR+YVQKCVDN KDVN QFAIKAKTIT GLKYSLAT NWGQ NAAGTRAGVSQV Sbjct: 126 MAESQNRPPSSMFVRMLSRASAKGGASGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYEFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQV 368
BLAST of Egl100000.1 vs. ExPASy TrEMBL
Match: A0A2K3P2Z2|A0A2K3P2Z2_TRIPR (DNA-directed RNA polymerase (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g006223 PE=3 SV=1) HSP 1 Score: 451.825 bits (1161), Expect = 8.527e-154 Identity = 219/243 (90.12%), Postives = 226/243 (93.00%), Query Frame = 0 Query: 1 MAEPQNRPPSTICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 MAE QNRPPST+ V+MLSR SAKGGSS QYIRATLPYIRTEIPIIIVFRALGF ADKDILEHI YDF DTQMMELLRPSLEEAF IQNQQVALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVG G++CETKKAYYFG+IIHRLLLCALGRRAED RDHYGNKRLDLAGPLLGGLFRMLFRKLT DVR YVQKCVDN KDVN QFAIKAKTIT GLKYSLAT NWGQ NAAGTRAGVSQV Sbjct: 220 MAESQNRPPSTMFVRMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQV 462
BLAST of Egl100000.1 vs. ExPASy TrEMBL
Match: A0A087GFV5|A0A087GFV5_ARAAL (DNA-directed RNA polymerase (Fragment) OS=Arabis alpina OX=50452 GN=AALP_Aa7g042700 PE=3 SV=1) HSP 1 Score: 445.662 bits (1145), Expect = 1.952e-153 Identity = 216/242 (89.26%), Postives = 224/242 (92.56%), Query Frame = 0 Query: 1 MAEPQNRPPSTICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWGQGNAAGTRAGVSQ 242 MAE QNRPPST+ V+MLSR SAKGGSS QYIR TLPYIRTEIPIIIVFRALGF ADKDILEHI YDF DTQMMELLRPSLEEAF IQNQQVALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVG G+FCETKKAYYFG+IIHRLLLCALGRR ED RDHYGNKRLDLAGPLLGGLFRMLFRKLT DVRSYVQKCVD+ K+VN QFAIKAKTIT GLKYSLAT NWGQ NAAGTRAGVSQ Sbjct: 238 MAENQNRPPSTMFVRMLSRASAKGGSSGQYIRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFGDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDHSKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQ 479
BLAST of Egl100000.1 vs. ExPASy TrEMBL
Match: A0A453LQL9|A0A453LQL9_AEGTS (DNA-directed RNA polymerase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1) HSP 1 Score: 444.506 bits (1142), Expect = 6.138e-153 Identity = 215/243 (88.48%), Postives = 223/243 (91.77%), Query Frame = 0 Query: 1 MAEPQNRPPSTICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 MAE QNRP S++ V+MLSR AKGGSS QYIRATLPYIR +IPIIIVFRALGF ADKDILEHI YDF DTQMMELLRPSLEEAF IQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVG G+FCETKKAYYFG+IIHRLL+CALGRRAED RDHYGNKRLDLAGPLLGGLFRMLFRKLT DVRSYVQKCVDN K+VN QFAIKAKTIT GLKYSLAT NWGQ N AGTRAGVSQV Sbjct: 211 MAENQNRPASSMFVRMLSRAGAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQV 453
BLAST of Egl100000.1 vs. ExPASy TrEMBL
Match: Q1L6D4|Q1L6D4_EMBCO (DNA-directed RNA polymerase (Fragment) OS=Embothrium coccineum OX=54937 GN=RPB2 PE=3 SV=1) HSP 1 Score: 451.44 bits (1160), Expect = 1.558e-152 Identity = 219/243 (90.12%), Postives = 226/243 (93.00%), Query Frame = 0 Query: 1 MAEPQNRPPSTICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 MAE QNRPPS++ V+MLSRTSAKGGSS QYIRATLPYIRTEIPIIIVFRALGF ADKDILEHI YDF DTQMM LLRPSLEEAF IQNQQVALDYIGKRG+TVGVTREKRIKYAKEILQKEMLPHVG G++CETKKAYYFG+IIHRLLLCALGRRAED RDHYGNKRLDLAGPLLGGLFRMLFRKLT DVR YVQKCVDN KDVN QFAIKAKTIT GLKYSLAT NWGQ NAAGTRAGVSQV Sbjct: 126 MAESQNRPPSSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMGLLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQV 368
BLAST of Egl100000.1 vs. ExPASy TrEMBL
Match: A0A0D2VFB3|A0A0D2VFB3_GOSRA (DNA-directed RNA polymerase subunit beta OS=Gossypium raimondii OX=29730 GN=B456_010G255400 PE=3 SV=1) HSP 1 Score: 460.299 bits (1183), Expect = 2.636e-152 Identity = 224/243 (92.18%), Postives = 228/243 (93.83%), Query Frame = 0 Query: 1 MAEPQNRPPSTICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 MAE QNRPPST+ V+MLSRTSAKGGSS QYIRATLPYIRTEIPIIIVFRALGF ADKDILEHI YDF DTQMMELLRPSLEEAF IQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVG G+FCETKKAYYFG+IIHRLLLCALGRRAED RDHYGNKRLDLAGPLLGGLFRMLFRKLT DVRSYVQKCVDN KDVN QFAIKAKTIT GLKYSLAT NWGQ NAAGTRAGVSQV Sbjct: 230 MAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQV 472
BLAST of Egl100000.1 vs. ExPASy Swiss-Prot
Match: RPB2_SOLLC (DNA-directed RNA polymerase II subunit RPB2 OS=Solanum lycopersicum OX=4081 GN=RPB2 PE=2 SV=1) HSP 1 Score: 454.521 bits (1168), Expect = 3.834e-151 Identity = 221/243 (90.95%), Postives = 227/243 (93.42%), Query Frame = 0 Query: 1 MAEPQNRPPSTICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 MA+ QNRPPST+ V+MLSRTSAKGGSS QYIRATLPYIRTEIPIIIVFRALGF ADKDILEHI YDF DTQMMELLRPSLEEAF IQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVG G++CETKKAYYFG+IIHRLLLCALGRRAED RDHYGNKRLDLAGPLLGGLFRMLFRKLT DVR YVQKCVDN KDVN QFAIKAKTIT GLKYSLAT NWGQ NAAGTRAGVSQV Sbjct: 230 MADTQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQV 472
BLAST of Egl100000.1 vs. ExPASy Swiss-Prot
Match: NRPB2_ARATH (DNA-directed RNA polymerase II subunit 2 OS=Arabidopsis thaliana OX=3702 GN=NRPB2 PE=1 SV=2) HSP 1 Score: 439.884 bits (1130), Expect = 1.626e-145 Identity = 214/243 (88.07%), Postives = 223/243 (91.77%), Query Frame = 0 Query: 1 MAEPQNRPPSTICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 MAE QNRPPST+ V+ML+R SAKGGSS QYIR TLPYIRTEIPIIIVFRALGF ADKDILEHI YDF DTQMMELLRPSLEEAF IQNQ VALDYIGKRGATVGVT+EKRIKYA++ILQKEMLPHVG G+ CETKKAYYFG+IIHRLLLCALGRR ED RDHYGNKRLDLAGPLLGGLFRMLFRKLT DVRSYVQKCVDN K+VN QFAIKAKTIT GLKYSLAT NWGQ NAAGTRAGVSQV Sbjct: 231 MAENQNRPPSTMFVRMLARASAKGGSSGQYIRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQLVALDYIGKRGATVGVTKEKRIKYARDILQKEMLPHVGIGEHCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQV 473
BLAST of Egl100000.1 vs. ExPASy Swiss-Prot
Match: RPB2_MOUSE (DNA-directed RNA polymerase II subunit RPB2 OS=Mus musculus OX=10090 GN=Polr2b PE=1 SV=2) HSP 1 Score: 323.168 bits (827), Expect = 1.676e-101 Identity = 160/244 (65.57%), Postives = 188/244 (77.05%), Query Frame = 0 Query: 3 EPQNRPPSTICVQMLSR--TSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWG-QGNAAGTRAGVSQV 243 E +RP STI V ML+R AK + Q I ATLPYI+ E+PIIIVFRALGF +D+DILEHI YDF+D +MME+++PSL+EAF IQ Q VAL++IG RGA GVT+EKRIKYAKE+LQKEMLPHVG DFCETKKAY+ G+++HRLLL ALGRR D RDHYGNKRLDLAGPLL LFR +F+ L +VR Y QK +D KD N + AIK + I+ GLKYSLAT NWG Q A RAGVSQV Sbjct: 226 ENSSRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQV 469
BLAST of Egl100000.1 vs. ExPASy Swiss-Prot
Match: RPB2_HUMAN (DNA-directed RNA polymerase II subunit RPB2 OS=Homo sapiens OX=9606 GN=POLR2B PE=1 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.838e-101 Identity = 160/244 (65.57%), Postives = 188/244 (77.05%), Query Frame = 0 Query: 3 EPQNRPPSTICVQMLSR--TSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWG-QGNAAGTRAGVSQV 243 E +RP STI V ML+R AK + Q I ATLPYI+ E+PIIIVFRALGF +D+DILEHI YDF+D +MME+++PSL+EAF IQ Q VAL++IG RGA GVT+EKRIKYAKE+LQKEMLPHVG DFCETKKAY+ G+++HRLLL ALGRR D RDHYGNKRLDLAGPLL LFR +F+ L +VR Y QK +D KD N + AIK + I+ GLKYSLAT NWG Q A RAGVSQV Sbjct: 226 ENSSRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQV 469
BLAST of Egl100000.1 vs. ExPASy Swiss-Prot
Match: RPB2_DICDI (DNA-directed RNA polymerase II subunit rpb2 OS=Dictyostelium discoideum OX=44689 GN=polr2b PE=3 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 1.239e-99 Identity = 154/241 (63.90%), Postives = 194/241 (80.50%), Query Frame = 0 Query: 3 EPQNRPPSTICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 E +RP ST+ ++ML T+ KG I+AT+PYI+ ++P+IIVFRALGF ADKDILEHI YDF+D QMM+L+RPSLEE+F IQ+Q+VALDY+GKRG+T+G TRE+RIK+A+E+LQKEMLPHV +F ETKKA+YFG+I HRLLL +L RR D RDH+ NKRLDLAGPLLG LFR LF+KLT DVR Y+Q+C+D K+ A+K+KTIT GLKYSLAT NWG + GT++GV+QV Sbjct: 231 ETGSRPTSTMYLKMLHNTN-KGPVG---IKATVPYIKQDVPVIIVFRALGFVADKDILEHICYDFKDAQMMDLMRPSLEESFVIQSQEVALDYLGKRGSTMG-TREQRIKFAREVLQKEMLPHVSVAEFYETKKAFYFGYITHRLLLASLERRPLDDRDHFANKRLDLAGPLLGTLFRQLFKKLTKDVRLYLQRCIDKDKEFIASSAVKSKTITSGLKYSLATGNWGSSKSGGTKSGVAQV 466
BLAST of Egl100000.1 vs. ExPASy Swiss-Prot
Match: RPB2_DROME (DNA-directed RNA polymerase II subunit RPB2 OS=Drosophila melanogaster OX=7227 GN=RpII140 PE=2 SV=2) HSP 1 Score: 315.849 bits (808), Expect = 7.380e-99 Identity = 157/244 (64.34%), Postives = 185/244 (75.82%), Query Frame = 0 Query: 3 EPQNRPPSTICVQMLSRTSA--KGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWG-QGNAAGTRAGVSQV 243 E +RP ST+ V M++R S K + Q I A LPYI+ EIPI+IVFRALGF AD+DILEHI YDF D +MME+++PSL+EAF +Q Q VAL++IG RGA GVT++KRIKYAKEILQKEMLPHVG DFCETKKAY+ G+++HRLLL +LGRR D RDHYGNKRLDLAGPLL LFR LF+ L +VR Y QK +D KD N + AIK IT GL+YSLAT NWG Q A RAGVSQV Sbjct: 227 EHSSRPTSTLWVNMMARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEMVKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQV 470
BLAST of Egl100000.1 vs. ExPASy Swiss-Prot
Match: RPB2_SCHPO (DNA-directed RNA polymerase II subunit RPB2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpb2 PE=1 SV=2) HSP 1 Score: 298.13 bits (762), Expect = 3.466e-92 Identity = 139/235 (59.15%), Postives = 182/235 (77.45%), Query Frame = 0 Query: 10 STICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWG-QGNAAGTRAGVSQV 243 S++ +++++R + G Q IRATLPYIR++IPI+IVFRALG D+DILEHI YD D QM+E+++P +EEAF IQ++ +ALDYIGKRG+T GVTREKR++YA +ILQKE+LPH+ T + ET+KA++ G++IHR+LLCAL RR D RDH+G KRLDLAGPLL LFRMLFRK+T DV Y+QKCV+ ++ N A+K+ IT GL+YSLAT NWG Q + R GVSQV Sbjct: 237 SSMQIKLMARNTENSG---QTIRATLPYIRSDIPIVIVFRALGVVPDRDILEHICYDPNDFQMLEMMKPCIEEAFVIQDKDIALDYIGKRGSTTGVTREKRLRYAHDILQKELLPHITTMEGFETRKAFFLGYMIHRMLLCALERREPDDRDHFGKKRLDLAGPLLASLFRMLFRKMTRDVYKYMQKCVETNREFNLTLAVKSNIITNGLRYSLATGNWGDQKRSMVNRVGVSQV 468
BLAST of Egl100000.1 vs. ExPASy Swiss-Prot
Match: RPB2_CAEEL (DNA-directed RNA polymerase II subunit RPB2 OS=Caenorhabditis elegans OX=6239 GN=rpb-2 PE=2 SV=2) HSP 1 Score: 291.582 bits (745), Expect = 9.281e-90 Identity = 146/244 (59.84%), Postives = 176/244 (72.13%), Query Frame = 0 Query: 3 EPQNRPPSTICVQMLSRTSAKGGSSE--QYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWG-QGNAAGTRAGVSQV 243 E +RP ST+ V ML+R G + Q I LPYI+ EIPI+IVFRALGF +D+DIL HI YDF D +MME+++PSL+EAF IQ Q VAL++IG RGA GVTRE+RIKYA+EILQKE+LPHVG + CETKKA++ G+++HRLLL ALGRR D RDH GNKRLDLAGPLL LFR LFR L ++R QK ++ D +K TIT GL YSLAT NWG Q A +RAGVSQV Sbjct: 232 ENSSRPTSTMWVNMLARGGGGGKKTAMGQRIIGILPYIKQEIPIMIVFRALGFVSDRDILGHIIYDFNDPEMMEMVKPSLDEAFVIQEQNVALNFIGARGAKPGVTREQRIKYAREILQKELLPHVGVSEHCETKKAFFIGYMVHRLLLAALGRRELDDRDHIGNKRLDLAGPLLAFLFRSLFRNLLKEMRMTAQKYINKNDDFALDVCVKTSTITRGLTYSLATGNWGDQKKAHQSRAGVSQV 475
BLAST of Egl100000.1 vs. ExPASy Swiss-Prot
Match: RPB2_PICGU (DNA-directed RNA polymerase II subunit RPB2 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=RPB2 PE=3 SV=3) HSP 1 Score: 278.485 bits (711), Expect = 6.644e-85 Identity = 131/220 (59.55%), Postives = 174/220 (79.09%), Query Frame = 0 Query: 25 GSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWG-QGNAAGTRAGVSQV 243 +S + I+ATLPYI+ +IPI+IVFRALG D DILEHI YD D QM+E+L+P +EE F IQ ++VALD+IG+RGA +G+ REKRI+YAK+ILQKE+LP++ + ET+KA++ G++++RLLLCAL R+ D RDH+G KRLDLAGPLL LFR+LF+KLT D+ +Y+Q+CV+N K N A+K++TIT GL+YSLAT NWG Q A +RAGVSQV Sbjct: 258 STSNRTIKATLPYIKEDIPIVIVFRALGIVPDGDILEHICYDANDWQMLEMLKPCVEEGFVIQEREVALDFIGRRGA-LGIKREKRIQYAKDILQKELLPNITQDEGFETRKAFFLGYMVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLASLFRILFKKLTKDIYNYMQRCVENDKVFNLTLAVKSQTITDGLRYSLATGNWGEQKKAMSSRAGVSQV 476
BLAST of Egl100000.1 vs. ExPASy Swiss-Prot
Match: RPB2_CANGA (DNA-directed RNA polymerase II subunit RPB2 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=RPB2 PE=3 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 1.718e-83 Identity = 132/235 (56.17%), Postives = 177/235 (75.32%), Query Frame = 0 Query: 10 STICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWG-QGNAAGTRAGVSQV 243 ST+ V++ R S SS + I+ATLPYI+ +IPI+I+FRALG D +ILEHI YD D QM+E+L+P +E+ F IQ+++ ALD+IG+RG +G+ +EKRI+YAK+ILQKE LPH+ + E++KA++ G++I+RLLLCAL R+ +D RDH+G KRLDLAGPLL LF+ LFRKLT D+ Y+Q+ V+ D N + AI AKTIT GLKY+LAT NWG Q A +RAGVSQV Sbjct: 250 STLQVKLYGRES----SSARTIKATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVNDWQMLEMLKPCVEDGFVIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHITQLEGFESRKAFFLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLTKDIFRYMQRTVEEANDFNMKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQV 480
BLAST of Egl100000.1 vs. Araport11
Match: | (Symbols: EMB1989, NRPB2, RPB2 | EMBRYO DEFECTIVE 1989 | chr4:11535684-11542200 REVERSE LENGTH=1188) HSP 1 Score: 439.884 bits (1130), Expect = 1.682e-146 Identity = 214/243 (88.07%), Postives = 223/243 (91.77%), Query Frame = 0 Query: 1 MAEPQNRPPSTICVQMLSRTSAKGGSSEQYIRATLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVNFQFAIKAKTITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 MAE QNRPPST+ V+ML+R SAKGGSS QYIR TLPYIRTEIPIIIVFRALGF ADKDILEHI YDF DTQMMELLRPSLEEAF IQNQ VALDYIGKRGATVGVT+EKRIKYA++ILQKEMLPHVG G+ CETKKAYYFG+IIHRLLLCALGRR ED RDHYGNKRLDLAGPLLGGLFRMLFRKLT DVRSYVQKCVDN K+VN QFAIKAKTIT GLKYSLAT NWGQ NAAGTRAGVSQV Sbjct: 231 MAENQNRPPSTMFVRMLARASAKGGSSGQYIRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQLVALDYIGKRGATVGVTKEKRIKYARDILQKEMLPHVGIGEHCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQV 473
BLAST of Egl100000.1 vs. Araport11
Match: | (Symbols: NRPC2 | nuclear RNA polymerase C2 | chr5:18250295-18257713 REVERSE LENGTH=832) HSP 1 Score: 82.0333 bits (201), Expect = 2.294e-17 Identity = 62/212 (29.25%), Postives = 109/212 (51.42%), Query Frame = 0 Query: 41 EIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFF--IQNQQVALDYIGKRGATVGV-TREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNR-KDVNFQFAIKAK-----TITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 +IPIIIV +A+G +D++I++ + +D + L PS+EE + Q+ ALDY+ + + T ++ A IL+ L HV D +K +Y G ++ R++ L + A D +D+ GNKRL+L+G L+ LF LF+ + + V ++ + F F+ +I+ GL+ +L+T N+ R G++QV Sbjct: 242 KIPIIIVLKAMGMESDQEIVQMVG---RDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPPEKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQV 450
BLAST of Egl100000.1 vs. Araport11
Match: | (Symbols: NRPC2 | nuclear RNA polymerase C2 | chr5:18247416-18257713 REVERSE LENGTH=1161) HSP 1 Score: 81.6481 bits (200), Expect = 3.068e-17 Identity = 62/212 (29.25%), Postives = 109/212 (51.42%), Query Frame = 0 Query: 41 EIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFF--IQNQQVALDYIGKRGATVGV-TREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNR-KDVNFQFAIKAK-----TITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 +IPIIIV +A+G +D++I++ + +D + L PS+EE + Q+ ALDY+ + + T ++ A IL+ L HV D +K +Y G ++ R++ L + A D +D+ GNKRL+L+G L+ LF LF+ + + V ++ + F F+ +I+ GL+ +L+T N+ R G++QV Sbjct: 242 KIPIIIVLKAMGMESDQEIVQMVG---RDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPPEKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQV 450
BLAST of Egl100000.1 vs. Araport11
Match: | (Symbols: NRPC2 | nuclear RNA polymerase C2 | chr5:18247416-18257713 REVERSE LENGTH=1161) HSP 1 Score: 81.6481 bits (200), Expect = 3.068e-17 Identity = 62/212 (29.25%), Postives = 109/212 (51.42%), Query Frame = 0 Query: 41 EIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLEEAFF--IQNQQVALDYIGKRGATVGV-TREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNR-KDVNFQFAIKAK-----TITGGLKYSLATRNWGQGNAAGTRAGVSQV 243 +IPIIIV +A+G +D++I++ + +D + L PS+EE + Q+ ALDY+ + + T ++ A IL+ L HV D +K +Y G ++ R++ L + A D +D+ GNKRL+L+G L+ LF LF+ + + V ++ + F F+ +I+ GL+ +L+T N+ R G++QV Sbjct: 242 KIPIIIVLKAMGMESDQEIVQMVG---RDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPPEKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQV 450
BLAST of Egl100000.1 vs. Araport11
Match: | (Symbols: NRPD2A, DMS2, DRD2, NRPE2, NRPD2, OCP1 | OVEREXPRESSOR OF CATIONIC PEROXIDASE 1, DEFECTIVE IN MERISTEM SILENCING 2, nuclear RNA polymerase D2A | chr3:8567971-8573819 REVERSE LENGTH=1172) HSP 1 Score: 68.9366 bits (167), Expect = 5.515e-13 Identity = 56/204 (27.45%), Postives = 97/204 (47.55%), Query Frame = 0 Query: 34 TLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLE------EAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVN-FQFAIKAKTITGGLKYSLATRNWGQ 230 T+ ++ TEIP+ ++F ALG ++DK+ ++ I +D D + L S+ EAF N AL Y+ ++ + T+ + E L + P + + KKA + G+++ LL G+R + RD + NKR++LAG LL R+ + +QK + D+ + + A IT GL + +T W Sbjct: 269 TVYFLSTEIPVWLLFFALGVSSDKEAMDLIAFDGDDASITNSLIASIHVADAVCEAFRCGNN--ALTYVEQQ---IKSTKFPPAESVDECLHLYLFPGLQS----LKKKARFLGYMVKCLLNSYAGKRKCENRDSFRNKRIELAGELLEREIRVHLAHARRKMTRAMQKHLSGDGDLKPIEHYLDASVITNGLSRAFSTGAWSH 463
BLAST of Egl100000.1 vs. Araport11
Match: | (Symbols: NRPD2A, DMS2, DRD2, NRPE2, NRPD2, OCP1 | OVEREXPRESSOR OF CATIONIC PEROXIDASE 1, DEFECTIVE IN MERISTEM SILENCING 2, nuclear RNA polymerase D2A | chr3:8567971-8573819 REVERSE LENGTH=1172) HSP 1 Score: 68.9366 bits (167), Expect = 5.515e-13 Identity = 56/204 (27.45%), Postives = 97/204 (47.55%), Query Frame = 0 Query: 34 TLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLE------EAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVN-FQFAIKAKTITGGLKYSLATRNWGQ 230 T+ ++ TEIP+ ++F ALG ++DK+ ++ I +D D + L S+ EAF N AL Y+ ++ + T+ + E L + P + + KKA + G+++ LL G+R + RD + NKR++LAG LL R+ + +QK + D+ + + A IT GL + +T W Sbjct: 269 TVYFLSTEIPVWLLFFALGVSSDKEAMDLIAFDGDDASITNSLIASIHVADAVCEAFRCGNN--ALTYVEQQ---IKSTKFPPAESVDECLHLYLFPGLQS----LKKKARFLGYMVKCLLNSYAGKRKCENRDSFRNKRIELAGELLEREIRVHLAHARRKMTRAMQKHLSGDGDLKPIEHYLDASVITNGLSRAFSTGAWSH 463
BLAST of Egl100000.1 vs. Araport11
Match: | (Symbols: NRPD2B | nuclear RNA polymerase D2B | chr3:6195323-6200204 FORWARD LENGTH=1055) HSP 1 Score: 66.2402 bits (160), Expect = 4.507e-12 Identity = 55/204 (26.96%), Postives = 96/204 (47.06%), Query Frame = 0 Query: 34 TLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLE------EAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVN-FQFAIKAKTITGGLKYSLATRNWGQ 230 T+ ++ TEIP+ ++F ALG ++DK+ ++ I +D D + L S+ EAF N AL Y+ + + T+ + + L+ + P + KKA + G+++ LL G+R + RD + NKR++LAG LL R+ + +QK + D+ + + A IT GL + +T W Sbjct: 151 TVYFLSTEIPVWLLFFALGVSSDKEAMDLIAFDGDDASITNSLIASIHEADAVCEAFRCGNN--ALTYVEHQ---IKSTKFPPAESVDDCLRLYLFPCLQG----LKKKARFLGYMVKCLLSAYAGKRKCENRDSFRNKRIELAGELLEREIRVHLAHARRKMTRAMQKQLSGDGDLKPIEHYLDASVITNGLNRAFSTGAWSH 345
BLAST of Egl100000.1 vs. Araport11
Match: | (Symbols: NRPD2B | nuclear RNA polymerase D2B | chr3:6195323-6199237 FORWARD LENGTH=894) HSP 1 Score: 66.2402 bits (160), Expect = 4.561e-12 Identity = 55/204 (26.96%), Postives = 96/204 (47.06%), Query Frame = 0 Query: 34 TLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLE------EAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVN-FQFAIKAKTITGGLKYSLATRNWGQ 230 T+ ++ TEIP+ ++F ALG ++DK+ ++ I +D D + L S+ EAF N AL Y+ + + T+ + + L+ + P + KKA + G+++ LL G+R + RD + NKR++LAG LL R+ + +QK + D+ + + A IT GL + +T W Sbjct: 151 TVYFLSTEIPVWLLFFALGVSSDKEAMDLIAFDGDDASITNSLIASIHEADAVCEAFRCGNN--ALTYVEHQ---IKSTKFPPAESVDDCLRLYLFPCLQG----LKKKARFLGYMVKCLLSAYAGKRKCENRDSFRNKRIELAGELLEREIRVHLAHARRKMTRAMQKQLSGDGDLKPIEHYLDASVITNGLNRAFSTGAWSH 345
BLAST of Egl100000.1 vs. Araport11
Match: | (Symbols: NRPD2B | nuclear RNA polymerase D2B | chr3:6195323-6199202 FORWARD LENGTH=905) HSP 1 Score: 65.855 bits (159), Expect = 5.610e-12 Identity = 55/204 (26.96%), Postives = 96/204 (47.06%), Query Frame = 0 Query: 34 TLPYIRTEIPIIIVFRALGFTADKDILEHIFYDFQDTQMMELLRPSLE------EAFFIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGHIIHRLLLCALGRRAEDVRDHYGNKRLDLAGPLLGGLFRMLFRKLTGDVRSYVQKCVDNRKDVN-FQFAIKAKTITGGLKYSLATRNWGQ 230 T+ ++ TEIP+ ++F ALG ++DK+ ++ I +D D + L S+ EAF N AL Y+ + + T+ + + L+ + P + KKA + G+++ LL G+R + RD + NKR++LAG LL R+ + +QK + D+ + + A IT GL + +T W Sbjct: 151 TVYFLSTEIPVWLLFFALGVSSDKEAMDLIAFDGDDASITNSLIASIHEADAVCEAFRCGNN--ALTYVEHQ---IKSTKFPPAESVDDCLRLYLFPCLQG----LKKKARFLGYMVKCLLSAYAGKRKCENRDSFRNKRIELAGELLEREIRVHLAHARRKMTRAMQKQLSGDGDLKPIEHYLDASVITNGLNRAFSTGAWSH 345 The following BLAST results are available for this feature:
BLAST of Egl100000.1 vs. ExPASy TrEMBL
Analysis Date: 2024-02-02 (Blastp of Citrus australasica cv. AZM v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Egl100000.1 vs. ExPASy Swiss-Prot
Analysis Date: 2024-02-02 (Blastp of Citrus australasica cv. AZM v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Egl100000.1 vs. Araport11
Analysis Date: 2024-02-02 (Blastp of Citrus australasica cv. AZM v1.0 proteins vs Araport11) Total hits: 9 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus australasica cv. AZM v1.0 proteins
Date Performed: 2024-02-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Egl100000.1-AZM_v1 ID=Egl100000.1-AZM_v1; Name=Egl100000.1; organism=Citrus australasica; type=mRNA; length=777bpback to top protein sequence of Egl100000.1-AZM_v1 >Egl100000.1-AZM_v1 ID=Egl100000.1-AZM_v1; Name=Egl100000.1-AZM_v1; organism=Citrus australasica; type=polypeptide; length=259bpback to top mRNA from alignment at contig224:126925..129660- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2736bp; location=Sequence derived from: contig224:126925..129660- (Citrus australasicaback to top Coding sequence (CDS) from alignment at contig224:126925..129660- >Egl100000.1-AZM_v1 ID=Egl100000.1-AZM_v1; Name=Egl100000.1; organism=Citrus australasica; type=CDS; length=777bp; location=Sequence derived from: contig224:126925..129660- (Citrus australasicaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|