Egl212310.3
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Egl212310.3 vs. ExPASy TrEMBL
Match: A0A067H2I7|A0A067H2I7_CITSI (CST complex subunit TEN1 OS=Citrus sinensis OX=2711 GN=CISIN_1g033186mg PE=4 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 3.120e-84 Identity = 123/125 (98.40%), Postives = 123/125 (98.40%), Query Frame = 0 Query: 1 MASSAIKSGALVTLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMNNTAT 125 MASSAIKSGALV LTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMNNT T Sbjct: 1 MASSAIKSGALVNLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMNNTVT 125
BLAST of Egl212310.3 vs. ExPASy TrEMBL
Match: A0A2H5PPY8|A0A2H5PPY8_CITUN (CST complex subunit TEN1 OS=Citrus unshiu OX=55188 GN=CUMW_156600 PE=4 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 2.512e-83 Identity = 122/125 (97.60%), Postives = 122/125 (97.60%), Query Frame = 0 Query: 1 MASSAIKSGALVTLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMNNTAT 125 MASSAIKSGALV LTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLY QSLQLLRQFQADRMNNT T Sbjct: 1 MASSAIKSGALVNLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYHQSLQLLRQFQADRMNNTVT 125
BLAST of Egl212310.3 vs. ExPASy TrEMBL
Match: V4TAV6|V4TAV6_CITCL (CST complex subunit TEN1 OS=Citrus clementina OX=85681 GN=CICLE_v10002848mg PE=4 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 1.155e-82 Identity = 121/125 (96.80%), Postives = 122/125 (97.60%), Query Frame = 0 Query: 1 MASSAIKSGALVTLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMNNTAT 125 MASSAIKSGALV LTELHPSSQFYEEGASLRVTGKLQDYAVE AMAIIADGNAILKIDTQHLRDLSF+VGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLY QSLQLLRQFQADRMNNTAT Sbjct: 1 MASSAIKSGALVNLTELHPSSQFYEEGASLRVTGKLQDYAVETAMAIIADGNAILKIDTQHLRDLSFQVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYHQSLQLLRQFQADRMNNTAT 125
BLAST of Egl212310.3 vs. ExPASy TrEMBL
Match: A0A6J1A6E3|A0A6J1A6E3_9ROSI (CST complex subunit TEN1 OS=Herrania umbratica OX=108875 GN=LOC110415121 PE=4 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.746e-66 Identity = 96/125 (76.80%), Postives = 112/125 (89.60%), Query Frame = 0 Query: 1 MASSAIKSGALVTLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMNNTAT 125 MAS AIK GALVTL EL PSS+F++EGASLRVTGKLQ+Y+VE A+A+IAD +A LK+DTQHLR+LSFRVGSI+QFIGELHIQ + EAILQAR GRNVDG+DLNLY Q+LQL+RQFQA+RMNN T Sbjct: 1 MASPAIKPGALVTLPELQPSSEFFKEGASLRVTGKLQEYSVETAIAVIADESATLKVDTQHLRELSFRVGSIFQFIGELHIQPNNEAILQARAGRNVDGIDLNLYHQALQLVRQFQAERMNNATT 125
BLAST of Egl212310.3 vs. ExPASy TrEMBL
Match: A0A6P5YT77|A0A6P5YT77_DURZI (CST complex subunit TEN1 OS=Durio zibethinus OX=66656 GN=LOC111294355 PE=4 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 3.123e-66 Identity = 96/125 (76.80%), Postives = 115/125 (92.00%), Query Frame = 0 Query: 1 MASSAIKSGALVTLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMNNTAT 125 MAS AIKSGALVTL EL PSS+F++EGASLRVTG+LQ+Y+VE A+A+IAD +A+LKIDT+HLR+LSFRVGSI+QFIGELHIQ + EAILQAR+GRNVDG+DLNLY QSLQL+RQFQA+RMN+ T Sbjct: 1 MASLAIKSGALVTLPELQPSSEFFKEGASLRVTGRLQEYSVETAIAVIADQSAVLKIDTKHLRELSFRVGSIFQFIGELHIQPNNEAILQARIGRNVDGIDLNLYHQSLQLVRQFQAERMNSATT 125
BLAST of Egl212310.3 vs. ExPASy TrEMBL
Match: A0A5N6QW84|A0A5N6QW84_9ROSI (CST complex subunit TEN1 OS=Carpinus fangiana OX=176857 GN=FH972_006663 PE=4 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 5.350e-66 Identity = 98/121 (80.99%), Postives = 112/121 (92.56%), Query Frame = 0 Query: 1 MASSAIKSGALVTLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMN 121 MASSAIKSG LV+L E+HPSSQF+++GASLRVTGKLQ+Y+VE A+AI+ DGNA LKI+TQHLRDLSFRVGSIYQFIGEL +Q D EAILQARVGRNVDG+DLNLY+QSLQLLRQFQAD +N Sbjct: 1 MASSAIKSGELVSLEEIHPSSQFFKQGASLRVTGKLQEYSVETAIAIVVDGNANLKINTQHLRDLSFRVGSIYQFIGELLLQPDNEAILQARVGRNVDGIDLNLYQQSLQLLRQFQADHLN 121
BLAST of Egl212310.3 vs. ExPASy TrEMBL
Match: A0A1R3KWF5|A0A1R3KWF5_9ROSI (Nucleic acid-binding protein OS=Corchorus olitorius OX=93759 GN=COLO4_03798 PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.846e-65 Identity = 94/125 (75.20%), Postives = 113/125 (90.40%), Query Frame = 0 Query: 1 MASSAIKSGALVTLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMNNTAT 125 MAS AIKSGALVTL EL PSS+F++EGASLRVTGKLQ+Y+ E A+A++AD +A L+IDTQHLR+LSFRVGS++QFIGELHIQ + EAILQAR GRNVDG+DL+LY QSLQL+RQFQA+RMNN+ T Sbjct: 1 MASPAIKSGALVTLPELQPSSEFFKEGASLRVTGKLQEYSAETAIAVVADESATLRIDTQHLRELSFRVGSVFQFIGELHIQPNNEAILQARTGRNVDGIDLDLYHQSLQLVRQFQAERMNNSTT 125
BLAST of Egl212310.3 vs. ExPASy TrEMBL
Match: A0A1R3KM53|A0A1R3KM53_COCAP (CST complex subunit TEN1 OS=Corchorus capsularis OX=210143 GN=CCACVL1_01153 PE=4 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 4.158e-65 Identity = 95/125 (76.00%), Postives = 113/125 (90.40%), Query Frame = 0 Query: 1 MASSAIKSGALVTLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMNNTAT 125 MAS AIKSGALVTL EL PSS+F++EGASLRVTGKLQ+Y+ E A+A+IAD +A L+IDTQHLR+LSFRVGSI+QFIGELHIQ + EAILQAR GRNVDG+DL+LY QSLQL+RQFQA+RM+N+ T Sbjct: 1 MASPAIKSGALVTLPELQPSSEFFKEGASLRVTGKLQEYSAETAIAVIADESATLRIDTQHLRELSFRVGSIFQFIGELHIQPNNEAILQARTGRNVDGIDLDLYHQSLQLVRQFQAERMSNSTT 125
BLAST of Egl212310.3 vs. ExPASy TrEMBL
Match: A0A061F2K6|A0A061F2K6_THECC (CST complex subunit TEN1 OS=Theobroma cacao OX=3641 GN=TCM_026701 PE=4 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 4.901e-65 Identity = 94/125 (75.20%), Postives = 112/125 (89.60%), Query Frame = 0 Query: 1 MASSAIKSGALVTLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMNNTAT 125 MAS AIK GALVTL EL PSS+F++EGASLRVTGKLQ+Y+VE A+A+IAD +A LK+DTQHLR+LSFRVGSI+QFIGELHIQ + EAILQAR GRNVDG+DLNLY Q+LQL+RQFQA+R+N+ T Sbjct: 1 MASPAIKPGALVTLPELRPSSEFFKEGASLRVTGKLQEYSVETAIAVIADDSATLKVDTQHLRELSFRVGSIFQFIGELHIQPNSEAILQARAGRNVDGIDLNLYHQALQLVRQFQAERVNSATT 125
BLAST of Egl212310.3 vs. ExPASy TrEMBL
Match: A0A1Q3CSY2|A0A1Q3CSY2_CEPFO (CST complex subunit TEN1 OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_26623 PE=4 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 7.521e-65 Identity = 101/125 (80.80%), Postives = 111/125 (88.80%), Query Frame = 0 Query: 1 MASSAIKSGALVTLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMNNTAT 125 MAS AI+SGALVTL+EL PSS F++ GASLRVTGKLQ+Y++E A+AII DG AILKIDTQHLRDL FRVGSIYQFIGEL IQ D EAILQARVGRNVDG+DLNLY QSLQLLRQFQAD MNN+ T Sbjct: 1 MASPAIESGALVTLSELDPSSSFFKLGASLRVTGKLQEYSLETAIAIITDGGAILKIDTQHLRDLGFRVGSIYQFIGEL-IQPDNEAILQARVGRNVDGIDLNLYHQSLQLLRQFQADHMNNSTT 124
BLAST of Egl212310.3 vs. ExPASy Swiss-Prot
Match: TEN1_ARATH (CST complex subunit TEN1 OS=Arabidopsis thaliana OX=3702 GN=TEN1 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.200e-51 Identity = 77/124 (62.10%), Postives = 98/124 (79.03%), Query Frame = 0 Query: 1 MASSAIKSGALVTLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHI-QADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMNNT 123 MA S I+ G +TL EL+PSS FY+EG SLRVT L+ Y+VE A+ +I DG LKI+TQ++RD+SFRVGSIYQFIGELHI Q + EAILQAR GRNVDG+D+NLYR++++LLRQF + N+ Sbjct: 1 MAKSQIEPGVPITLQELYPSSLFYKEGVSLRVTAMLRGYSVETAIGVIEDGGRSLKINTQNIRDVSFRVGSIYQFIGELHIEQPNNEAILQARTGRNVDGIDMNLYRKTIELLRQFLKEEDNSN 124
BLAST of Egl212310.3 vs. Araport11
Match: | (Symbols: TEN1, MDO1 | MERISTEM DISORGANIZATION 1, telomeric pathways in association with Stn1 | chr1:21064647-21065577 REVERSE LENGTH=127) HSP 1 Score: 161.384 bits (407), Expect = 3.348e-52 Identity = 77/124 (62.10%), Postives = 98/124 (79.03%), Query Frame = 0 Query: 1 MASSAIKSGALVTLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHI-QADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMNNT 123 MA S I+ G +TL EL+PSS FY+EG SLRVT L+ Y+VE A+ +I DG LKI+TQ++RD+SFRVGSIYQFIGELHI Q + EAILQAR GRNVDG+D+NLYR++++LLRQF + N+ Sbjct: 1 MAKSQIEPGVPITLQELYPSSLFYKEGVSLRVTAMLRGYSVETAIGVIEDGGRSLKINTQNIRDVSFRVGSIYQFIGELHIEQPNNEAILQARTGRNVDGIDMNLYRKTIELLRQFLKEEDNSN 124
BLAST of Egl212310.3 vs. Araport11
Match: | (Symbols: TEN1, MDO1 | MERISTEM DISORGANIZATION 1, telomeric pathways in association with Stn1 | chr1:21064647-21065577 REVERSE LENGTH=127) HSP 1 Score: 161.384 bits (407), Expect = 3.348e-52 Identity = 77/124 (62.10%), Postives = 98/124 (79.03%), Query Frame = 0 Query: 1 MASSAIKSGALVTLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQHLRDLSFRVGSIYQFIGELHI-QADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRMNNT 123 MA S I+ G +TL EL+PSS FY+EG SLRVT L+ Y+VE A+ +I DG LKI+TQ++RD+SFRVGSIYQFIGELHI Q + EAILQAR GRNVDG+D+NLYR++++LLRQF + N+ Sbjct: 1 MAKSQIEPGVPITLQELYPSSLFYKEGVSLRVTAMLRGYSVETAIGVIEDGGRSLKINTQNIRDVSFRVGSIYQFIGELHIEQPNNEAILQARTGRNVDGIDMNLYRKTIELLRQFLKEEDNSN 124 The following BLAST results are available for this feature:
BLAST of Egl212310.3 vs. ExPASy TrEMBL
Analysis Date: 2024-02-02 (Blastp of Citrus australasica cv. AZM v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Egl212310.3 vs. ExPASy Swiss-Prot
Analysis Date: 2024-02-02 (Blastp of Citrus australasica cv. AZM v1.0 proteins vs UniProt Swissprot) Total hits: 1 Position : 0 Zoom : x 1
BLAST of Egl212310.3 vs. Araport11
Analysis Date: 2024-02-02 (Blastp of Citrus australasica cv. AZM v1.0 proteins vs Araport11) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus australasica cv. AZM v1.0 proteins
Date Performed: 2024-02-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Egl212310.3-AZM_v1 ID=Egl212310.3-AZM_v1; Name=Egl212310.3; organism=Citrus australasica; type=mRNA; length=378bpback to top protein sequence of Egl212310.3-AZM_v1 >Egl212310.3-AZM_v1 ID=Egl212310.3-AZM_v1; Name=Egl212310.3-AZM_v1; organism=Citrus australasica; type=polypeptide; length=126bpback to top mRNA from alignment at contig264:454375..457261+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2887bp; location=Sequence derived from: contig264:454375..457261+ (Citrus australasicaback to top Coding sequence (CDS) from alignment at contig264:454375..457261+ >Egl212310.3-AZM_v1 ID=Egl212310.3-AZM_v1; Name=Egl212310.3; organism=Citrus australasica; type=CDS; length=378bp; location=Sequence derived from: contig264:454375..457261+ (Citrus australasicaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|