NM_gene55350.t1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of NM_gene55350.t1 vs. ExPASy TrEMBL
Match: A0A2H5PRA6|A0A2H5PRA6_CITUN (DYW_deaminase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_160280 PE=3 SV=1) HSP 1 Score: 1686.77 bits (4367), Expect = 0.000e+0 Identity = 809/820 (98.66%), Postives = 813/820 (99.15%), Query Frame = 0 Query: 1 MFRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESGEIDFDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 MFRLAPS KDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENES EIDFDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA VARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYI+KHGLEFNLFVSNNLINMY KFGM+RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRN RAVHGFIMRRGWFMEDVIIGNAVVDMYAKLG+INSA AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIH RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA+ISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW Sbjct: 1 MFRLAPSGKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAIVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNCRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
BLAST of NM_gene55350.t1 vs. ExPASy TrEMBL
Match: A0A067F8D6|A0A067F8D6_CITSI (DYW_deaminase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g003439mg PE=3 SV=1) HSP 1 Score: 1677.14 bits (4342), Expect = 0.000e+0 Identity = 801/820 (97.68%), Postives = 810/820 (98.78%), Query Frame = 0 Query: 1 MFRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESGEIDFDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 MFRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENES EIDFD LFQSCTKLHHVKRLHALL+VSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD+GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA+SDNILSGLLIHLYI+KHGLEFNLFVSNNLINMY KFGM+RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA+LNDCRNSR+VHGFIMRRGWFMEDVIIGNAVVDMYAKLG+INSA AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN NQGTYVSILPAYSHVGALRQGIKIH RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA+ISCHGIHG GDKALN FRQMLDEGVRPDHITFVSLL ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW Sbjct: 1 MFRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
BLAST of NM_gene55350.t1 vs. ExPASy TrEMBL
Match: A0A067EXB7|A0A067EXB7_CITSI (DYW_deaminase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g003439mg PE=3 SV=1) HSP 1 Score: 1446.03 bits (3742), Expect = 0.000e+0 Identity = 689/705 (97.73%), Postives = 697/705 (98.87%), Query Frame = 0 Query: 116 MISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 MISVYVR GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD+GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA+SDNILSGLLIHLYI+KHGLEFNLFVSNNLINMY KFGM+RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA+LNDCRNSR+VHGFIMRRGWFMEDVIIGNAVVDMYAKLG+INSA AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN NQGTYVSILPAYSHVGALRQGIKIH RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA+ISCHGIHG GDKALN FRQMLDEGVRPDHITFVSLL ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW Sbjct: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705 HSP 2 Score: 224.942 bits (572), Expect = 3.087e-59 Identity = 142/488 (29.10%), Postives = 256/488 (52.46%), Query Frame = 0 Query: 50 FDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHG-LEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINANQGTYVSILPAYSHVGALRQGIK-IHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAVISCHGIHGH 529 F + ++C L K++H +L G VF + L++ Y G + +R FD + R+ +WN+MIS Y +SG EA+D + L G+ D T +L C N++ G IH ++K G E+++FV+ +L++MY +FG+ A ++FD M RD SWN++I+ Y QS + + A M+ G+ D +T+ S+ + AQ ++ + +H +I++ G ++ + N +++MY K G+I A VF+ + +DV+SWN++I Y Q+ A F M++ I P+ T VS+ + + R +H +++ DV + +VDMY K G I+ A ++F +P + WN +I+ + +G +A+ F QM++E + + T+VS+L A SH G + +G + H+ + + + C+VD++G+ G + A + +P R + W A++ IHG+ Sbjct: 34 FPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL-EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE--GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 517
BLAST of NM_gene55350.t1 vs. ExPASy TrEMBL
Match: V4SBQ6|V4SBQ6_CITCL (DYW_deaminase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10027922mg PE=3 SV=1) HSP 1 Score: 1439.86 bits (3726), Expect = 0.000e+0 Identity = 687/705 (97.45%), Postives = 695/705 (98.58%), Query Frame = 0 Query: 116 MISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 MISVYVR GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD+GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA+SDNILSGLLIHLYI+KHGLEFNLFVSNNLINMY KFGM+RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA+LNDCRNSR+VHGFIMRR WFMEDVIIGNAVVDMYAKLG+INSA AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN NQGTYVSILPAYSHVGALRQGIKIH RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA+ISCHGIHG GDKALN FRQMLDEGVRPDHITFVSLL ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH FKDGICSCGDYW Sbjct: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRDWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHRFKDGICSCGDYW 705 HSP 2 Score: 222.246 bits (565), Expect = 3.543e-58 Identity = 141/488 (28.89%), Postives = 255/488 (52.25%), Query Frame = 0 Query: 50 FDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHG-LEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINANQGTYVSILPAYSHVGALRQGIK-IHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAVISCHGIHGH 529 F + ++C L K++H +L G VF + L++ Y G + +R FD + R+ +WN+MIS Y +SG EA+D + L G+ D T +L C N++ G IH ++K G E+++FV+ +L++MY +FG+ A ++FD M RD SWN++I+ Y QS + + A M+ G+ D +T+ S+ + AQ ++ + +H +I++ ++ + N +++MY K G+I A VF+ + +DV+SWN++I Y Q+ A F M++ I P+ T VS+ + + R +H ++ + DV + +VDMY K G I+ A ++F +P + WN +I+ + +G +A+ F QM++E + + T+VS+L A SH G + +G + H+ + + + C+VD++G+ G + A + +P R + W A++ IHG+ Sbjct: 34 FPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL-EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRDWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI-KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE--GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 517
BLAST of NM_gene55350.t1 vs. ExPASy TrEMBL
Match: A0A6P6AES4|A0A6P6AES4_DURZI (pentatricopeptide repeat-containing protein At4g33990-like isoform X2 OS=Durio zibethinus OX=66656 GN=LOC111308937 PE=3 SV=1) HSP 1 Score: 1316.98 bits (3407), Expect = 0.000e+0 Identity = 614/820 (74.88%), Postives = 713/820 (86.95%), Query Frame = 0 Query: 1 MFRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESGEIDFDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 MFRL P+ + R + K+LP LQ LFSAA+NSLQ + D E+ +DF+ LF+SC +LH K LHAL++VSGK +++F S KLVN Y+ LGD+SFSR TFDHI ++VYTWNSM+S YVRSG EAVDCFYQF LTS LRPDFYTF PVLKAC+ +DG +IHC VLKLGFEWDVFV ASL+HMY RFG+ ARKLFDDMPVRD GSWNAMISGYCQ+GN EALD+L+EMRLEGV MDP+T+ SILP+CAQ D+IL+G+LIHLY IKHGLEF+LFVSN LINMY K G + HA +VFD M+ RDVVSWNSIIAAYEQ++DP A G F MQ G PD LTLVSL+SIVA+L+D + ++VHGF+MRRGW ++DVI GN+VVDMYAKLGV++SARAVFE LPVKDV+SWNTLITGYAQNGLASEAIE F MM+EC EI NQGT+VSILPAYS+VGAL+QG++IH ++IKN L D+FV TCL+DMYGKCG++DDAMSLF++VP+ +SVPWNA+ISCHGIHGH +KAL LFR+M +EGV+PDHITFVSLL+AC HSGLV EGQR FH+MQEE+GIKP LKHYGCMVDLFGRAGHL MA+NFI+NMPV+PDAS+WGALLGACRIHGN++LGA AS+RLFEVDSENVGYYVL+SNIYAN+GKWEGVD+VR++ARDRGL+KTPGWSSIEVNNKVD+FYTGN++HPK E+IY ELR LT KMKSLGYVPD SFVLQDVEEDEKEHIL SHSERLAIAFGII +PPKSPI+IFKNLRVCGDCHN TKFIS+ITEREIIVRDSNRFHHFKDG+CSCGDYW Sbjct: 1 MFRLVPTYRGRHISKILPSLQVRFTLFSAASNSLQSTSDGYEDGCKAVDFNCLFKSCKRLHLAKHLHALVVVSGKAQSIFFSAKLVNIYSYLGDVSFSRRTFDHIPIKDVYTWNSMVSAYVRSGHFREAVDCFYQFFLTSDLRPDFYTFAPVLKACKIPLDGMRIHCLVLKLGFEWDVFVTASLVHMYTRFGIVGSARKLFDDMPVRDMGSWNAMISGYCQNGNVAEALDVLNEMRLEGVKMDPVTIVSILPICAQLDDILNGMLIHLYAIKHGLEFDLFVSNALINMYAKVGKLEHAQKVFDHMVIRDVVSWNSIIAAYEQNDDPNGALGLFYNMQLIGTSPDYLTLVSLSSIVAQLSDSPSCKSVHGFVMRRGWILKDVISGNSVVDMYAKLGVMDSARAVFEALPVKDVVSWNTLITGYAQNGLASEAIEAFGMMQECKEITPNQGTWVSILPAYSNVGALKQGMRIHGQLIKNSLYLDIFVGTCLIDMYGKCGKLDDAMSLFFEVPKMTSVPWNAIISCHGIHGHAEKALKLFREMREEGVKPDHITFVSLLSACGHSGLVEEGQRCFHVMQEEYGIKPILKHYGCMVDLFGRAGHLEMAYNFIKNMPVKPDASVWGALLGACRIHGNIDLGAFASNRLFEVDSENVGYYVLLSNIYANIGKWEGVDKVRAVARDRGLRKTPGWSSIEVNNKVDVFYTGNQSHPKCEEIYKELRCLTDKMKSLGYVPDYSFVLQDVEEDEKEHILMSHSERLAIAFGIIKTPPKSPIRIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 820
BLAST of NM_gene55350.t1 vs. ExPASy TrEMBL
Match: A0A1Q3CBH5|A0A1Q3CBH5_CEPFO (PPR domain-containing protein/PPR_2 domain-containing protein/DYW_deaminase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_20903 PE=3 SV=1) HSP 1 Score: 1315.06 bits (3402), Expect = 0.000e+0 Identity = 615/820 (75.00%), Postives = 711/820 (86.71%), Query Frame = 0 Query: 1 MFRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESGEIDFDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 MFRL P+CK R + K LP +QA PLFS A +SLQ+ LENE IDFD LFQSCTK+ H K LH LL+VSG + ST+LVN YA LGD+ FS F+ + +NV+TWNSMIS YVRSG+ EAVDCFYQF LTSGL+PDFYTFPPVLKACR+++DGK IHCSVLKLGF+WDVFV ASL+HMY RFGL VA KLFDDMP+RD GSWNAMISGYCQ+GN +EAL++ D+M EGV MDP+T+ SILPVCAQSD+IL+G+LIHLY IKHGL+F+LFVSN LINMY KFG + HA R+FD M+ RD+VSWNSIIAAYEQ++D +TA G+F MQ G+QPD+LTLVSL SIVA+L+D RN ++VHG+IMRRGWFM D IGNAVVDMYAKLG + S+RAVFEGLPVKDVISWN+LITGYAQNGLASEAIEV++MMEE EI +QGT+VSILPAYSH+GAL+QG++IH RV KN L DVFV TCLVDMYGKCGR+DDAMSLFYQ+PR SSVPWNA+I+CHG+HGH KALNLFR+MLDE V+PDH+TFVSLL+ACSHSGL+ EGQ FH+MQEE+GIKP L+HYGCMVDLFGRAG+L +AHNFI++MPVRPDAS+WGALL ACR HGN ELG VASD LFE+DSE VGYYVL+SNIYANVGKWEGVDEVRSLARDRGL+KTPGWSSIEV N+VD+FY+GN++HPK E+IY ELRNLTAK+KSLGYVPD SFVLQDVE+DEKE ILTSHSERLAI FGII++PPK+PI+IFKNLRVCGDCH WTK+IS+ITEREI+VRDSNRFHHFKDGICSC DYW Sbjct: 1 MFRLVPTCKGRHVSKFLPSVQAFCPLFSPATSSLQVISYGLENEYKGIDFDHLFQSCTKVCHAKSLHCLLVVSGNAHDIILSTRLVNLYAYLGDVLFSHRIFEQVPNKNVFTWNSMISAYVRSGQFLEAVDCFYQFNLTSGLKPDFYTFPPVLKACRSVLDGKGIHCSVLKLGFQWDVFVTASLIHMYSRFGLVGVACKLFDDMPIRDRGSWNAMISGYCQNGNVIEALNVRDQMSFEGVKMDPVTLVSILPVCAQSDDILTGMLIHLYAIKHGLDFDLFVSNALINMYAKFGSLGHAQRIFDHMLVRDIVSWNSIIAAYEQNDDAVTALGWFNMMQVNGMQPDILTLVSLASIVAQLSDLRNGQSVHGYIMRRGWFMGDAAIGNAVVDMYAKLGDLESSRAVFEGLPVKDVISWNSLITGYAQNGLASEAIEVYRMMEEYKEIIPDQGTWVSILPAYSHLGALQQGMRIHGRVFKNRLYLDVFVGTCLVDMYGKCGRLDDAMSLFYQLPRKSSVPWNAIIACHGVHGHAKKALNLFREMLDERVKPDHVTFVSLLSACSHSGLICEGQWCFHVMQEEYGIKPSLRHYGCMVDLFGRAGYLELAHNFIKDMPVRPDASVWGALLAACRKHGNTELGMVASDHLFELDSEEVGYYVLLSNIYANVGKWEGVDEVRSLARDRGLRKTPGWSSIEVGNEVDVFYSGNQSHPKCEEIYMELRNLTAKIKSLGYVPDYSFVLQDVEDDEKEQILTSHSERLAIGFGIITTPPKTPIRIFKNLRVCGDCHTWTKYISRITEREIMVRDSNRFHHFKDGICSCKDYW 820
BLAST of NM_gene55350.t1 vs. ExPASy TrEMBL
Match: A0A6P6GH33|A0A6P6GH33_ZIZJJ (pentatricopeptide repeat-containing protein At4g33990 OS=Ziziphus jujuba OX=326968 GN=LOC107427084 PE=3 SV=1) HSP 1 Score: 1315.06 bits (3402), Expect = 0.000e+0 Identity = 611/818 (74.69%), Postives = 714/818 (87.29%), Query Frame = 0 Query: 3 RLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESGEIDFDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 RL P+CK+ ++ K LP +QAH FSA N+LQ+ D ENE+ +IDFD+LF SCT +H K LH+LL+VSG+++ +F S KLVN YA L D+SFSR TFD I +++YTWNSM+S YVRSGR +A++CFY F LTS LRPDFYTFPPVLKAC NLVDGKKIHC V KLGFE DVFVAASL+HMY RFG +ARKLF++MP+RD GSWNAMISG+CQ+GNA EALD+++EMRL+GV MDP+TV+S+L VCAQS+++LSG+LIHLY+IKHGLEF++FV N LINMY KF ++ HA +VFDQM RDVVSWNSIIAAYEQ+++PITA F+ +QQ GIQ D LTL+SL SI+A+L D R SR+VHGFI+RRGW M+DV GNAVVDMYAKLG I+SAR VFEGLPVKDVISWNTLITGYAQNGLASEA+EV+ MM+E +I NQGT+VS+LPAYSH+GAL+QG++IH RV+KNCL DVFV TCL+DMYGKCGR+DDAM LFY+VPR SSVPWNA+ISCHGIHGHGDKAL LF+ ML E V+PDH+TFVSLL+ACSHSGLV EGQRYF MQ+E+GIKP LKHYGCMVDLFGRAGHL MA+NFI+NMPV+PDASIWGALLGACRIHGN+EL ASD LFEV++ENVGYYVL+SNIYAN GKWEGVD+VRSLARD+GL+KTPGWSSIE NNKVD+FYTGN++HP E+IY ELR LTAKMKSLGY+PD SFVLQDVEEDEKEHILTSHSERLAIAFGIIS+PPK+PI+IFKNLRVCGDCHN TK+IS+ITEREIIVRD+NRFHHFKDGICSCGDYW Sbjct: 2 RLVPACKNLQIFKFLPSVQAHCSFFSAVTNTLQVPADGFENENKKIDFDMLFPSCTTVHLAKCLHSLLVVSGRVENIFLSAKLVNLYAYLDDVSFSRRTFDQIPKKDIYTWNSMVSAYVRSGRFQQAIECFYHFLLTSDLRPDFYTFPPVLKACGNLVDGKKIHCWVQKLGFESDVFVAASLIHMYSRFGHLVIARKLFNEMPIRDTGSWNAMISGFCQNGNAAEALDVMNEMRLDGVKMDPVTVSSLLTVCAQSNDMLSGMLIHLYVIKHGLEFDVFVCNALINMYAKFCIVDHARKVFDQMKIRDVVSWNSIIAAYEQNDEPITAFEFYKKLQQNGIQSDSLTLLSLASIIAQLTDDRKSRSVHGFILRRGWLMQDVATGNAVVDMYAKLGSIDSARTVFEGLPVKDVISWNTLITGYAQNGLASEAVEVYDMMKERTDIIPNQGTWVSVLPAYSHLGALQQGMRIHGRVMKNCLYMDVFVGTCLIDMYGKCGRLDDAMLLFYEVPRKSSVPWNAIISCHGIHGHGDKALELFKNMLVEEVKPDHVTFVSLLSACSHSGLVGEGQRYFDAMQKEYGIKPSLKHYGCMVDLFGRAGHLEMAYNFIKNMPVQPDASIWGALLGACRIHGNVELCKFASDSLFEVETENVGYYVLLSNIYANFGKWEGVDKVRSLARDKGLRKTPGWSSIEANNKVDVFYTGNQSHPNCEEIYTELRFLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKTPIRIFKNLRVCGDCHNATKYISKITEREIIVRDANRFHHFKDGICSCGDYW 819
BLAST of NM_gene55350.t1 vs. ExPASy TrEMBL
Match: A0A7N2MYK1|A0A7N2MYK1_QUELO (DYW_deaminase domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 1313.9 bits (3399), Expect = 0.000e+0 Identity = 621/820 (75.73%), Postives = 712/820 (86.83%), Query Frame = 0 Query: 1 MFRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESGEIDFDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 MFRL P+C R + K LP LQAH LFSAA +S Q + D +N + +IDF++LF SCTK+H K LHA LLVSGK + +F S +LVN YA L D+SF++ TFD I ++VYTWNSM+S YVRSGR +A++CFY F LTSG+RPD Y+FP VLKAC NLVDGKK+HC VLKLGFEWDVFVAASL+HMY RFG + ARKLF++MPVRD GSWNAMISGYCQ+GNA EAL++LDEMRLEGV MDP+TV+S+L VC+QSD+ LSG+LIHLY+IKHGLE +LFVSN LINMY KFG + HA RVFDQM RDVVSWNSIIAAYEQ+++PITA G F MQ GIQPDLLT VSL SIVA+L+D ++SR+VHGFI+RRGW MEDV+IGNA+VDMYAKLG I+SAR VFEGLPVKD ISWN+LITGYAQNGLASEAIEV++MMEE EI NQGT+VSILPAYSHVGAL+QG++IH RVIKNCL DVFV TCLVDMYGKCGR+DD +SLFY +PR SSVPWNAVISC GIHGHG+KAL LF +ML EGV+PDH+TFVSLL+ACSHSGLV EGQ F MMQEE+GIKP LKHYGCMVDL GRAG L MA+N I+NMP++PDAS+WGALLGACRIHGN EL ASDRLFEV+ ENVGYYVL+SNIYANVGKWE +D+VRSLAR+RGL+KTPGWSSIEVNNKVD+FYTGN+THPK E+IY+EL+ LT KMKSLGY+PD SFVLQDVE+DEKEHILTSHSERLAIAFGIIS+PPKS I+IFKNLRVCGDCHN TKFIS+ITEREI+VRDSNRFHHFKDGICSCGDYW Sbjct: 1 MFRLLPTCIGRHISKSLPSLQAHCSLFSAAISSRQFTSDGFDNGNKDIDFNILFSSCTKVHLAKCLHAFLLVSGKGQNIFLSARLVNLYAYLSDVSFAQRTFDQIPKKDVYTWNSMVSAYVRSGRFRDAINCFYLFLLTSGIRPDSYSFPSVLKACGNLVDGKKMHCWVLKLGFEWDVFVAASLVHMYSRFGFLSAARKLFNNMPVRDMGSWNAMISGYCQNGNAAEALEVLDEMRLEGVKMDPVTVSSLLAVCSQSDDSLSGMLIHLYVIKHGLECDLFVSNALINMYAKFGSLGHAQRVFDQMEVRDVVSWNSIIAAYEQNDNPITALGLFNKMQLIGIQPDLLTAVSLASIVAQLSDRQSSRSVHGFILRRGWLMEDVVIGNAIVDMYAKLGAIDSARTVFEGLPVKDAISWNSLITGYAQNGLASEAIEVYRMMEEHKEIIPNQGTWVSILPAYSHVGALQQGMRIHGRVIKNCLYLDVFVGTCLVDMYGKCGRLDDVLSLFYHIPRMSSVPWNAVISCLGIHGHGEKALKLFNEMLVEGVKPDHVTFVSLLSACSHSGLVDEGQWCFRMMQEEYGIKPSLKHYGCMVDLLGRAGRLEMAYNVIKNMPIQPDASVWGALLGACRIHGNYELSTFASDRLFEVEPENVGYYVLLSNIYANVGKWEDLDKVRSLARNRGLRKTPGWSSIEVNNKVDVFYTGNQTHPKCEEIYNELKVLTTKMKSLGYIPDFSFVLQDVEDDEKEHILTSHSERLAIAFGIISTPPKSTIRIFKNLRVCGDCHNATKFISRITEREIVVRDSNRFHHFKDGICSCGDYW 820
BLAST of NM_gene55350.t1 vs. ExPASy TrEMBL
Match: A0A061DZS3|A0A061DZS3_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_007072 PE=3 SV=1) HSP 1 Score: 1312.36 bits (3395), Expect = 0.000e+0 Identity = 611/820 (74.51%), Postives = 715/820 (87.20%), Query Frame = 0 Query: 1 MFRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESGEIDFDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 MFRL P+ + R + K+ PLLQ PLFSAAANSLQ + + E+ IDF+ LF+SCT+LH KRLHAL+LVSGK +++F S KLVN YA L D+SFSR TFD I+ ++VYTWNSM+S YVRSGR EAVDCFYQF TSGLRPDFYTFPPVLKAC+NL DG ++HC VLKLGFEWDVFV ASL+HMY RF + ARKLFDDMPVRD GSWNAMISGYCQ+GNA EAL++L+EMRLE V MDP+T+ASILP+CAQ D+IL G LIHLY IK GLEF+LFVSN LINMY KFG + HA +VFD M+ RD+VSWNSIIAAYEQ++DP A G F M+ GI PD LTLVSL+SIVA+L+D R ++VHGF+MRRGWF++DVI GN+VVDMYAKLG+++SA AVF LPVKDV+SWNTLITGYAQNGLA EAIE + MM+EC EI NQ T+VSILPAYS+VGAL+QG+++H R+IKN D+FV TCL+DMYGKCG++DDAMSLF++VP+ +SVPWNA+ISCHGIHGH +KAL LFR+M +EGV+PDH+TFVSLL+ACSHSGLV EGQ FH+MQEE+GI+P LKHYGCMVDLFGRAGHL MA+NFI+N+PV+PDAS+WGALLGACRIHGN++LG ASDRLFEVDS+NVGYYVL+SNIYAN+GKWEGVD+VR++ARD+GL+KTPGWSSIEV+NKVD+FYTGNR+HPK E+I+ ELR+LTAKMKSLGYVPD SFVLQDVEEDEKEHIL SHSERLAIA+GIISSPPKSPI+IFKNLRVCGDCHN TKFISQIT+REIIVRDSNRFHHFKDGICSCGDYW Sbjct: 1 MFRLVPTYRVRHISKIFPLLQVRCPLFSAAANSLQGTSNGCEDNDKSIDFNHLFKSCTQLHLAKRLHALVLVSGKAQSIFISAKLVNLYAYLCDVSFSRRTFDQINEKDVYTWNSMVSAYVRSGRFQEAVDCFYQFFSTSGLRPDFYTFPPVLKACKNLPDGMRMHCLVLKLGFEWDVFVTASLVHMYTRFRIVGSARKLFDDMPVRDMGSWNAMISGYCQNGNAAEALEVLNEMRLERVMMDPVTIASILPICAQLDDILYGRLIHLYAIKSGLEFDLFVSNALINMYAKFGKLEHAQKVFDHMVVRDLVSWNSIIAAYEQNDDPHMALGLFYNMKLIGINPDYLTLVSLSSIVAQLSDSRKGKSVHGFVMRRGWFLKDVISGNSVVDMYAKLGIMDSAHAVFYVLPVKDVVSWNTLITGYAQNGLAGEAIEAYGMMQECKEITPNQATWVSILPAYSNVGALQQGMRVHGRLIKNSFYLDIFVGTCLIDMYGKCGKLDDAMSLFFEVPKMTSVPWNAIISCHGIHGHAEKALKLFREMREEGVKPDHVTFVSLLSACSHSGLVDEGQWCFHVMQEEYGIEPILKHYGCMVDLFGRAGHLEMAYNFIKNLPVKPDASVWGALLGACRIHGNIDLGTFASDRLFEVDSDNVGYYVLLSNIYANIGKWEGVDKVRAVARDKGLRKTPGWSSIEVSNKVDVFYTGNRSHPKCEEIFKELRSLTAKMKSLGYVPDYSFVLQDVEEDEKEHILMSHSERLAIAYGIISSPPKSPIRIFKNLRVCGDCHNATKFISQITDREIIVRDSNRFHHFKDGICSCGDYW 820
BLAST of NM_gene55350.t1 vs. ExPASy TrEMBL
Match: A0A6P6AEY2|A0A6P6AEY2_DURZI (pentatricopeptide repeat-containing protein At4g33990-like isoform X1 OS=Durio zibethinus OX=66656 GN=LOC111308937 PE=3 SV=1) HSP 1 Score: 1311.98 bits (3394), Expect = 0.000e+0 Identity = 612/819 (74.73%), Postives = 711/819 (86.81%), Query Frame = 0 Query: 2 FRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESGEIDFDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 RL P+ + R + K+LP LQ LFSAA+NSLQ + D E+ +DF+ LF+SC +LH K LHAL++VSGK +++F S KLVN Y+ LGD+SFSR TFDHI ++VYTWNSM+S YVRSG EAVDCFYQF LTS LRPDFYTF PVLKAC+ +DG +IHC VLKLGFEWDVFV ASL+HMY RFG+ ARKLFDDMPVRD GSWNAMISGYCQ+GN EALD+L+EMRLEGV MDP+T+ SILP+CAQ D+IL+G+LIHLY IKHGLEF+LFVSN LINMY K G + HA +VFD M+ RDVVSWNSIIAAYEQ++DP A G F MQ G PD LTLVSL+SIVA+L+D + ++VHGF+MRRGW ++DVI GN+VVDMYAKLGV++SARAVFE LPVKDV+SWNTLITGYAQNGLASEAIE F MM+EC EI NQGT+VSILPAYS+VGAL+QG++IH ++IKN L D+FV TCL+DMYGKCG++DDAMSLF++VP+ +SVPWNA+ISCHGIHGH +KAL LFR+M +EGV+PDHITFVSLL+AC HSGLV EGQR FH+MQEE+GIKP LKHYGCMVDLFGRAGHL MA+NFI+NMPV+PDAS+WGALLGACRIHGN++LGA AS+RLFEVDSENVGYYVL+SNIYAN+GKWEGVD+VR++ARDRGL+KTPGWSSIEVNNKVD+FYTGN++HPK E+IY ELR LT KMKSLGYVPD SFVLQDVEEDEKEHIL SHSERLAIAFGII +PPKSPI+IFKNLRVCGDCHN TKFIS+ITEREIIVRDSNRFHHFKDG+CSCGDYW Sbjct: 25 LRLVPTYRGRHISKILPSLQVRFTLFSAASNSLQSTSDGYEDGCKAVDFNCLFKSCKRLHLAKHLHALVVVSGKAQSIFFSAKLVNIYSYLGDVSFSRRTFDHIPIKDVYTWNSMVSAYVRSGHFREAVDCFYQFFLTSDLRPDFYTFAPVLKACKIPLDGMRIHCLVLKLGFEWDVFVTASLVHMYTRFGIVGSARKLFDDMPVRDMGSWNAMISGYCQNGNVAEALDVLNEMRLEGVKMDPVTIVSILPICAQLDDILNGMLIHLYAIKHGLEFDLFVSNALINMYAKVGKLEHAQKVFDHMVIRDVVSWNSIIAAYEQNDDPNGALGLFYNMQLIGTSPDYLTLVSLSSIVAQLSDSPSCKSVHGFVMRRGWILKDVISGNSVVDMYAKLGVMDSARAVFEALPVKDVVSWNTLITGYAQNGLASEAIEAFGMMQECKEITPNQGTWVSILPAYSNVGALKQGMRIHGQLIKNSLYLDIFVGTCLIDMYGKCGKLDDAMSLFFEVPKMTSVPWNAIISCHGIHGHAEKALKLFREMREEGVKPDHITFVSLLSACGHSGLVEEGQRCFHVMQEEYGIKPILKHYGCMVDLFGRAGHLEMAYNFIKNMPVKPDASVWGALLGACRIHGNIDLGAFASNRLFEVDSENVGYYVLLSNIYANIGKWEGVDKVRAVARDRGLRKTPGWSSIEVNNKVDVFYTGNQSHPKCEEIYKELRCLTDKMKSLGYVPDYSFVLQDVEEDEKEHILMSHSERLAIAFGIIKTPPKSPIRIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 843
BLAST of NM_gene55350.t1 vs. Araport11
Match: AT4G33990.2 (| Tetratricopeptide repeat (TPR)-like superfamily protein | Chr4:16290141-16292679 REVERSE LENGTH=816 | 201606) HSP 1 Score: 1087.02 bits (2810), Expect = 0.000e+0 Identity = 515/823 (62.58%), Postives = 644/823 (78.25%), Query Frame = 0 Query: 1 MFRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLEN--ESGEID-FDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 M R P+CK R ++L + + FSA+AN+LQ DC +N ES EID LF+ CT L K LHA L+VS +I+ V S KLVN Y LG+++ +RHTFDHI R+VY WN MIS Y R+G SE + CF F L+SGL PD+ TFP VLKACR ++DG KIHC LK GF WDV+VAASL+H+Y R+ AR LFD+MPVRD GSWNAMISGYCQSGNA EAL + + +R +MD +TV S+L C ++ + G+ IH Y IKHGLE LFVSN LI++Y +FG +R +VFD+M RD++SWNSII AYE + P+ A F M+ + IQPD LTL+SL SI+++L D R R+V GF +R+GWF+ED+ IGNAVV MYAKLG+++SARAVF LP DVISWNT+I+GYAQNG ASEAIE++ +MEE EI ANQGT+VS+LPA S GALRQG+K+H R++KN L DVFV T L DMYGKCGR++DA+SLFYQ+PR +SVPWN +I+CHG HGHG+KA+ LF++MLDEGV+PDHITFV+LL+ACSHSGLV EGQ F MMQ ++GI P LKHYGCMVD++GRAG L A FI++M ++PDASIWGALL ACR+HGN++LG +AS+ LFEV+ E+VGY+VL+SN+YA+ GKWEGVDE+RS+A +GL+KTPGWSS+EV+NKV++FYTGN+THP YE++Y EL L AK+K +GYVPD FVLQDVE+DEKEHIL SHSERLAIAF +I++P K+ I+IFKNLRVCGDCH+ TKFIS+ITEREIIVRDSNRFHHFK+G+CSCGDYW Sbjct: 1 MLRQIPTCKGGRFTRVLQSIGSVIREFSASANALQ---DCWKNGNESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 816
BLAST of NM_gene55350.t1 vs. Araport11
Match: AT4G33990.1 (| Tetratricopeptide repeat (TPR)-like superfamily protein | Chr4:16290141-16292612 REVERSE LENGTH=823 | 201606) HSP 1 Score: 1083.94 bits (2802), Expect = 0.000e+0 Identity = 514/821 (62.61%), Postives = 643/821 (78.32%), Query Frame = 0 Query: 3 RLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLEN--ESGEID-FDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 R P+CK R ++L + + FSA+AN+LQ DC +N ES EID LF+ CT L K LHA L+VS +I+ V S KLVN Y LG+++ +RHTFDHI R+VY WN MIS Y R+G SE + CF F L+SGL PD+ TFP VLKACR ++DG KIHC LK GF WDV+VAASL+H+Y R+ AR LFD+MPVRD GSWNAMISGYCQSGNA EAL + + +R +MD +TV S+L C ++ + G+ IH Y IKHGLE LFVSN LI++Y +FG +R +VFD+M RD++SWNSII AYE + P+ A F M+ + IQPD LTL+SL SI+++L D R R+V GF +R+GWF+ED+ IGNAVV MYAKLG+++SARAVF LP DVISWNT+I+GYAQNG ASEAIE++ +MEE EI ANQGT+VS+LPA S GALRQG+K+H R++KN L DVFV T L DMYGKCGR++DA+SLFYQ+PR +SVPWN +I+CHG HGHG+KA+ LF++MLDEGV+PDHITFV+LL+ACSHSGLV EGQ F MMQ ++GI P LKHYGCMVD++GRAG L A FI++M ++PDASIWGALL ACR+HGN++LG +AS+ LFEV+ E+VGY+VL+SN+YA+ GKWEGVDE+RS+A +GL+KTPGWSS+EV+NKV++FYTGN+THP YE++Y EL L AK+K +GYVPD FVLQDVE+DEKEHIL SHSERLAIAF +I++P K+ I+IFKNLRVCGDCH+ TKFIS+ITEREIIVRDSNRFHHFK+G+CSCGDYW Sbjct: 10 RQIPTCKGGRFTRVLQSIGSVIREFSASANALQ---DCWKNGNESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
BLAST of NM_gene55350.t1 vs. Araport11
Match: AT1G11290.1 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr1:3791454-3793883 REVERSE LENGTH=809 | 201606) HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0 Identity = 300/772 (38.86%), Postives = 460/772 (59.59%), Query Frame = 0 Query: 52 VLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 +L + C+ L ++++ L+ +G + F TKLV+ + G + + F+ I + +++M+ + + L +A+ F + + P Y F +LK C + + GK+IH ++K GF D+F L +MY + N ARK+FD MP RD SWN +++GY Q+G A AL+++ M E + IT+ S+LP + I G IH Y ++ G + + +S L++MY K G + A ++FD M+ER+VVSWNS+I AY Q+ +P A F M G++P ++++ A L D R +H + G +V + N+++ MY K +++A ++F L + ++SWN +I G+AQNG +A+ F M + + TYVS++ A + + IH V+++CL +VFV T LVDMY KCG I A +F + WNA+I +G HG G AL LF +M ++P+ +TF+S+++ACSHSGLV G + F+MM+E + I+ + HYG MVDL GRAG L A +FI MPV+P +++GA+LGAC+IH N+ A++RLFE++ ++ GY+VL++NIY WE V +VR +GL+KTPG S +E+ N+V F++G+ HP +KIY L L +K GYVPD + VL VE D KE +L++HSE+LAI+FG++++ + I + KNLRVC DCHN TK+IS +T REI+VRD RFHHFK+G CSCGDYW Sbjct: 42 LLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDD-VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG-LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS-RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of NM_gene55350.t1 vs. Araport11
Match: AT4G18750.1 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr4:10304850-10307465 FORWARD LENGTH=871 | 201606) HSP 1 Score: 579.326 bits (1492), Expect = 0.000e+0 Identity = 303/741 (40.89%), Postives = 442/741 (59.65%), Query Frame = 0 Query: 83 TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA---CRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 +KL Y N GDL + FD + WN +++ +SG S ++ F + ++SG+ D YTF V K+ R++ G+++H +LK GF V SL+ Y + + ARK+FD+M RD SWN++I+GY +G A + L + +M + G+ +D T+ S+ CA S I G +H +K N L++MY+K G + A VF +M +R VVS+ S+IA Y + A F M++ GI PD+ T+ ++ + A+ + VH +I D+ + NA++DMYAK G + A VF + VKD+ISWNT+I GY++N A+EA+ +F ++ E + ++ T +LPA + + A +G +IH +++N D VA LVDMY KCG + A LF + V W +I+ +G+HG G +A+ LF QM G+ D I+FVSLL ACSHSGLV EG R+F++M+ E I+P ++HY C+VD+ R G L A+ FI+NMP+ PDA+IWGALL CRIH +++L ++++FE++ EN GYYVLM+NIYA KWE V +R RGL+K PG S IE+ +V+IF G+ ++P+ E I LR + A+M GY P + L D EE EKE L HSE+LA+A GIISS I++ KNLRVCGDCH KF+S++T REI++RDSNRFH FKDG CSC +W Sbjct: 133 SKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF-DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871 HSP 2 Score: 247.284 bits (630), Expect = 1.198e-69 Identity = 165/553 (29.84%), Postives = 284/553 (51.36%), Query Frame = 0 Query: 54 FQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT-TMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHM--MQEEFGIKPHLKHYGCM-VDLFGR 597 F S +H ++LH +L SG + LV FY + +R FD ++ R+V +WNS+I+ YV +G + + F Q L SG+ D T V C R + G+ +H +K F + +LL MY + G + A+ +F +M R S+ +MI+GY + G A EA+ + +EM EG+S D TV ++L CA+ + G +H +I ++ L F++FVSN L++MY K G ++ A VF +M +D++SWN+II Y ++ A F +++ PD T+ + A L+ R +HG+IMR G+F D + N++VDMYAK G + A +F+ + KD++SW +I GY +G EAI +F M + I A++ ++VS+L A SH G + +G + + C + V C+VDM + G + A +P + W A++ IH A + ++ + + P++ + L+A + +E +++ + +++ G + K+ GC +++ GR Sbjct: 205 FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM-LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF-SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG-IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE--LEPENTGYYVLMA-----NIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 747 HSP 3 Score: 234.187 bits (596), Expect = 4.410e-65 Identity = 157/536 (29.29%), Postives = 275/536 (51.31%), Query Frame = 0 Query: 101 TFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEG-VRPDHITFVSLLAACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631 TFD R+V N+ + + SG L AV ++ D T VL+ C ++L DGK++ + GF D + + L MY G A ++FD++ + WN +++ +SG+ ++ + +M GV MD T + + + ++ G +H +I+K G V N+L+ Y K + A +VFD+M ERDV+SWNSII Y + F M +GI+ DL T+VS+ + A RAVH ++ + ED N ++DMY+K G ++SA+AVF + + V+S+ ++I GYA+ GLA EA+++F+ MEE I+ + T ++L + L +G ++H + +N L FD+FV+ L+DMY KCG + +A +F ++ + WN +I + + + ++AL+LF +L+E PD T +L AC+ +G+ + ++M+ + H+ + +VD++ + G L +AH ++ + D W ++ +HG Sbjct: 56 TFD----RSVTDANTQLRRFCESGNLENAVKLL---CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE-EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMHG 579
BLAST of NM_gene55350.t1 vs. Araport11
Match: AT3G57430.1 (| Tetratricopeptide repeat (TPR)-like superfamily protein | Chr3:21255731-21258403 REVERSE LENGTH=890 | 201606) HSP 1 Score: 575.474 bits (1482), Expect = 0.000e+0 Identity = 303/794 (38.16%), Postives = 469/794 (59.07%), Query Frame = 0 Query: 50 FDVLFQSCTKLHHV---KRLHALLLVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL------VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHG-LEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE----------INANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR-PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 F L ++ L + K++HA + G + +V + LVN Y GD FD IS RN +WNS+IS + A++ F + L + P +T V+ AC NL + GK++H L+ G E + F+ +L+ MY + G ++ L RD +WN ++S CQ+ +EAL+ L EM LEGV D T++S+LP C+ + + +G +H Y +K+G L+ N FV + L++MY + RVFD M +R + WN++IA Y Q+ A F M++ AG+ + T+ + + A+HGF+++RG D + N ++DMY++LG I+ A +F + +D+++WNT+ITGY + +A+ + M+ + N T ++ILP+ + + AL +G +IH IKN L DV V + LVDMY KCG + + +F Q+P+ + + WN +I +G+HG+G +A++L R M+ +GV+P+ +TF+S+ AACSHSG+V EG R F++M+ ++G++P HY C+VDL GRAG + A+ + MP A W +LLGA RIH N+E+G +A+ L +++ +YVL++NIY++ G W+ EVR +++G++K PG S IE ++V F G+ +HP+ EK+ L L +M+ GYVPD S VL +VEEDEKE +L HSE+LAIAFGI+++ P + I++ KNLRVC DCH TKFIS+I +REII+RD RFH FK+G CSCGDYW Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG-LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890 HSP 2 Score: 250.366 bits (638), Expect = 1.212e-70 Identity = 160/543 (29.47%), Postives = 274/543 (50.46%), Query Frame = 0 Query: 108 RNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWD-VFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQ---SDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQM------LDEG-----VRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632 R+ W ++ VRS L EAV + + G++PD Y FP +LKA +L D GK+IH V K G+ D V VA +L+++Y + G K+FD + R+ SWN++IS C AL+ M E V T+ S++ C+ + ++ G +H Y ++ G E N F+ N L+ MY K G + + + RD+V+WN+++++ Q+ + A + M G++PD T+ S+ + L R + +H + ++ G E+ +G+A+VDMY + S R VF+G+ + + WN +I GY+QN EA+ +F MEE + AN T ++PA GA + IH V+K L D FV L+DMY + G+ID AM +F ++ V WN +I+ + H + AL L +M + +G ++P+ IT +++L +C+ +++G+ H + + + +VD++ + G L M+ +P + + W ++ A +HGN Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVL-GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
BLAST of NM_gene55350.t1 vs. Araport11
Match: AT4G30700.1 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr4:14962617-14964995 REVERSE LENGTH=792 | 201606) HSP 1 Score: 563.533 bits (1451), Expect = 0.000e+0 Identity = 289/777 (37.19%), Postives = 458/777 (58.94%), Query Frame = 0 Query: 48 IDFDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVS-MDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 +DF F+ T + H+ + HA +++ G + TKL ++LG + ++R F + +V+ +N ++ + + ++ F ++ L+P+ T+ + A D G+ IH + G + ++ + ++++ MY +F ARK+FD MP +D WN MISGY ++ VE++ + ++ E + +D T+ ILP A+ + G+ IH K G + +V I++Y+K G I+ +F + + D+V++N++I Y + + + F + +G + TLVSL + L A+HG+ ++ F+ + A+ +Y+KL I SAR +F+ P K + SWN +I+GY QNGL +AI +F+ M++ +E + N T IL A + +GAL G +H V ++V+T L+ MY KCG I +A LF + + + V WN +IS +G+HG G +ALN+F +ML+ G+ P +TF+ +L ACSH+GLV EG F+ M +G +P +KHY CMVD+ GRAGHL A FI+ M + P +S+W LLGACRIH + L S++LFE+D +NVGY+VL+SNI++ + VR A+ R L K PG++ IE+ +F +G+++HP+ ++IY++L L KM+ GY P+ L DVEE+E+E ++ HSERLAIAFG+I++ P + I+I KNLRVC DCH TK IS+ITER I+VRD+NRFHHFKDG+CSCGDYW Sbjct: 24 LDF---FKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSN-FLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK-SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
BLAST of NM_gene55350.t1 vs. Araport11
Match: AT5G16860.1 (| Tetratricopeptide repeat (TPR)-like superfamily protein | Chr5:5543834-5546386 FORWARD LENGTH=850 | 201606) HSP 1 Score: 547.74 bits (1410), Expect = 0.000e+0 Identity = 313/846 (37.00%), Postives = 474/846 (56.03%), Query Frame = 0 Query: 28 SAAANSLQISPDCLENESGEIDFDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI--SYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLR--PDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-----------------------------------AGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFI------MRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVK--DVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCL-CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 +AAA S Q L + S C + VK +H LL G I T+ ++ L++ Y ++G LS + S VY WNS+I Y +G A C Y F L L PD YTFP V KAC + G+ H L GF +VFV +L+ MY R + ARK+FD+M V D SWN++I Y + G AL++ M E G D IT+ ++LP CA G +H + + + N+FV N L++MY K GM+ A VF M +DVVSWN+++A Y Q A F MQ+ +GI+P+ +TL+S+ S A + + + +H + +R+ ++ ++ N ++DMYAK +++ARA+F+ L K DV++W +I GY+Q+G A++A+E+ +M EE + N T L A + + ALR G +IH ++N +FV+ CL+DMY KCG I DA +F + + V W ++++ +G+HG+G++AL +F +M G + D +T + +L ACSHSG++ +G YF+ M+ FG+ P +HY C+VDL GRAG L A I+ MP+ P +W A L CRIHG +ELG A++++ E+ S + G Y L+SN+YAN G+W+ V +RSL R +G+KK PG S +E F+ G++THP ++IY L + ++K +GYVP+ F L DV+++EK+ +L HSE+LA+A+GI+++P + I+I KNLRVCGDCH ++S+I + +II+RDS+RFHHFK+G CSC YW Sbjct: 9 NAAAKSHQYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFG-ILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGC---ANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
BLAST of NM_gene55350.t1 vs. Araport11
Match: AT3G63370.1 (| Tetratricopeptide repeat (TPR)-like superfamily protein | Chr3:23402080-23404962 FORWARD LENGTH=960 | 201606) HSP 1 Score: 547.354 bits (1409), Expect = 0.000e+0 Identity = 291/784 (37.12%), Postives = 470/784 (59.95%), Query Frame = 0 Query: 46 GEIDFDVLFQSCTKLHHVK---RLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR-NVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM-KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 G F L ++C KL ++ LH+LL+ G T F LV+ YA DLS +R FD + + WNS++S Y SG+ E ++ F + +T G P+ YT L AC GK+IH SVLK +++V +L+ MY R G A ++ M D +WN++I GY Q+ EAL+ +M G D +++ SI+ + N+L+G+ +H Y+IKHG + NL V N LI+MY+K + + R F +M ++D++SW ++IA Y Q++ + A F + + ++ D + L S+ + L + +H I+R+G D +I N +VD+Y K + A VFE + KDV+SW ++I+ A NG SEA+E+F+ M E ++A+ + IL A + + AL +G +IH +++ C + +A +VDMY CG + A ++F ++ R + + ++I+ +G+HG G A+ LF +M E V PDHI+F++LL ACSH+GL+ EG+ + +M+ E+ ++P +HY C+VD+ GRA + A F++ M P A +W ALL ACR H E+G +A+ RL E++ +N G VL+SN++A G+W V++VR+ + G++K PG S IE++ KV F +++HP+ ++IY++L +T K+ + +GYV D FVL +V+E EK +L HSER+AIA+G++ +P ++ ++I KNLRVC DCH + K +S++ R+I++RD+NRFHHF+ G+CSCGD W Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT-GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL--DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-LSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960 HSP 2 Score: 252.677 bits (644), Expect = 4.808e-71 Identity = 184/668 (27.54%), Postives = 330/668 (49.40%), Query Frame = 0 Query: 3 RLAPSCKDRRLCKLLPLLQAHRPL---------FSAAANSLQISPDCLENESGEIDFDVLFQSCTKLHHV---KRLHALLLVS-GKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFN-LFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651 RL S C+ P Q+++P+ F D EN S F + + C K V ++LH+ + + + F + KLV Y G L + FD + R + WN+MI YV +G + A+ ++ + G+ +FP +LKAC L D G ++H ++KLG+ F+ +L+ MY + + AR+LFD + D WN+++S Y SG ++E L++ EM + G + + T+ S L C G IH ++K + L+V N LI MYT+ G + A R+ QM DVV+WNS+I Y Q+ A FF+ M AG + D +++ S+ + +L++ +H ++++ GW ++ +GN ++DMY+K + F + KD+ISW T+I GYAQN EA+E+F+ + + + ++ SIL A S + ++ +IH +++ L D + LVD+YGKC + A +F + V W ++IS ++G+ +A+ LFR+M++ G+ D + + +L+A + +++G+ + +++++ F ++ + +VD++ G L A + R + +++ A +HG G A + ++ ENV Sbjct: 27 RLHCSIPTEPSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV-EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD-SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA--VAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHG---CGKAAVELFDKMRHENV 684
BLAST of NM_gene55350.t1 vs. Araport11
Match: AT3G22690.2 (| LOW protein: PPR containing-like protein | Chr3:8022006-8024534 REVERSE LENGTH=842 | 201606) HSP 1 Score: 547.354 bits (1409), Expect = 0.000e+0 Identity = 299/806 (37.10%), Postives = 468/806 (58.06%), Query Frame = 0 Query: 54 FQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLG---DLSFSRHTFDHI-SYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKL-------------------------------GVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 ++C + +K H L G V + TKLV LG LSF++ F++ SY + +NS+I Y SG +EA+ F + + SG+ PD YTFP L AC R +G +IH ++K+G+ D+FV SL+H Y G + ARK+FD+M R+ SW +MI GY + A +A+D+ M R E V+ + +T+ ++ CA+ +++ +G ++ +I G+E N + + L++MY K I A R+FD+ ++ N++ + Y + A G F M +G++PD ++++S S ++L + ++ HG+++R G+ D I NA++DMY K G +++A FE +P K+++SWNT+I+G Q L EAIEVF M+ +NA+ T +SI A H+GAL I+ + KN + DV + T LVDM+ +CG + AMS+F + W A I + G+ ++A+ LF M+++G++PD + FV L ACSH GLV +G+ F+ M + G+ P HYGCMVDL GRAG L A I++MP+ P+ IW +LL ACR+ GN+E+ A A++++ + E G YVL+SN+YA+ G+W + +VR +++GL+K PG SSI++ K F +G+ +HP+ I L ++ + LG+VPD S VL DV+E EK +L+ HSE+LA+A+G+ISS + I+I KNLRVC DCH++ KF S++ REII+RD+NRFH+ + G CSCGD+W Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRM-MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842 HSP 2 Score: 196.438 bits (498), Expect = 3.566e-52 Identity = 145/511 (28.38%), Postives = 242/511 (47.36%), Query Frame = 0 Query: 150 PPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA---NVARKLFDDMPVRDNG-SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG-FFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQ---GIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLD--------------------------------EGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620 P LK C+ + + K H S+ K G + DV L+ C G + A+++F++ +N++I GY SG EA+ + M G+S D T L CA+S +G+ IH I+K G +LFV N+L++ Y + G + A +VFD+M ER+VVSW S+I Y + + A FF ++ + P+ +T+V + S AKL D V+ FI G + D+++ +A+VDMY K I+ A+ +F+ ++ N + + Y + GL EA+ VF +M + + + +S+L A S LR G H V++N + L+DMY KC R D A +F ++ + V WN++++ + +G D A F M + EGV D +T +S+ +AC H G + + ++ + E+ GI+ ++ +VD+F R G A + ++ R D S W Sbjct: 36 PSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD----SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAW 539 HSP 3 Score: 137.887 bits (346), Expect = 4.133e-33 Identity = 117/464 (25.22%), Postives = 208/464 (44.83%), Query Frame = 0 Query: 53 LFQSCTKLHHVK---RLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFE-WD------------------------------VFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMR-LEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAV-HGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVK--DVISWNTLITGYAQNG---LASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHV 472 + +C KL ++ +++A + SG + LV+ Y + ++ FD N+ N+M S YVR G EA+ F + SG+RPD + + +C RN++ GK H VL+ GFE WD V S++ Y G + A + F+ MP ++ SWN +ISG Q EA+++ M+ EGV+ D +T+ SI C + I+ YI K+G++ ++ + L++M+++ G A+ +F+ + RDV +W + I A + + A F M + G++PD + V + + + + + + + G EDV G +VD+ + G++ A + E +P++ DVI WN+L+ G +A+ A E Q++ G+YV + Y+ G K+ + Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMAAYAAEKIQVLAP-----ERTGSYVLLSNVYASAGRWNDMAKVRL 697
BLAST of NM_gene55350.t1 vs. Araport11
Match: AT3G02010.1 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr3:337965-340442 FORWARD LENGTH=825 | 201606) HSP 1 Score: 543.888 bits (1400), Expect = 0.000e+0 Identity = 276/753 (36.65%), Postives = 428/753 (56.84%), Query Frame = 0 Query: 77 KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLR-PDFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEWDVFVAAS--LLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVI--IGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS-ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 K S+ +++ + GD+S +R FD + R V TW ++ Y R+ EA F Q +S PD TF +L C + V ++H +KLGF+ + F+ S LL YC ++A LF+++P +D+ ++N +I+GY + G E++ + +MR G T + +L + G +H + G + V N +++ Y+K + +FD+M E D VS+N +I++Y Q++ + FF MQ G ++ SI A L+ + R +H + D I +GN++VDMYAK + A +F+ LP + +SW LI+GY Q GL +++F M N + A+Q T+ ++L A + +L G ++H +I++ +VF + LVDMY KCG I DA+ +F ++P ++V WNA+IS H +G G+ A+ F +M++ G++PD ++ + +L ACSH G V +G YF M +GI P KHY CM+DL GR G A + MP PD +W ++L ACRIH N L A+++LF ++ + YV MSNIYA G+WE V +V+ R+RG+KK P +S +EVN+K+ +F + ++THP ++I ++ LTA+++ GY PD S V+QDV+E K L HSERLA+AF +IS+P PI + KNLR C DCH K IS+I +REI VRD++RFHHF +G+CSCGDYW Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL---LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN-LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825 HSP 2 Score: 154.451 bits (389), Expect = 2.334e-38 Identity = 114/440 (25.91%), Postives = 211/440 (47.95%), Query Frame = 0 Query: 43 NESGEIDFDVLFQSCTKLHHV---KRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDV--IIG--------NAVVDMYAKLGVINSARAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVG 462 ++ + F + ++ LH ++LHAL + +G + ++++FY+ + +R FD + + ++N +IS Y ++ + ++ F + R +F F +L NL G+++HC L + + V SL+ MY + + A +F +P R SW A+ISGY Q G L + +MR + D T A++L A ++L G +H +II+ G N+F + L++MY K G I+ A++VF++M +R+ VSWN++I+A+ + D A G F M ++G+QPD VS+ ++ + C GF+ + + + + I G ++D+ + G A + + +P + D I W++++ + LA A E ME+ + A YVS+ Y+ G Sbjct: 246 HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNF-PFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD---SVSILGVLTACSHC-------GFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAA----YVSMSNIYAAAG 670
BLAST of NM_gene55350.t1 vs. ExPASy Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2) HSP 1 Score: 1083.94 bits (2802), Expect = 0.000e+0 Identity = 514/821 (62.61%), Postives = 643/821 (78.32%), Query Frame = 0 Query: 3 RLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLEN--ESGEID-FDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 R P+CK R ++L + + FSA+AN+LQ DC +N ES EID LF+ CT L K LHA L+VS +I+ V S KLVN Y LG+++ +RHTFDHI R+VY WN MIS Y R+G SE + CF F L+SGL PD+ TFP VLKACR ++DG KIHC LK GF WDV+VAASL+H+Y R+ AR LFD+MPVRD GSWNAMISGYCQSGNA EAL + + +R +MD +TV S+L C ++ + G+ IH Y IKHGLE LFVSN LI++Y +FG +R +VFD+M RD++SWNSII AYE + P+ A F M+ + IQPD LTL+SL SI+++L D R R+V GF +R+GWF+ED+ IGNAVV MYAKLG+++SARAVF LP DVISWNT+I+GYAQNG ASEAIE++ +MEE EI ANQGT+VS+LPA S GALRQG+K+H R++KN L DVFV T L DMYGKCGR++DA+SLFYQ+PR +SVPWN +I+CHG HGHG+KA+ LF++MLDEGV+PDHITFV+LL+ACSHSGLV EGQ F MMQ ++GI P LKHYGCMVD++GRAG L A FI++M ++PDASIWGALL ACR+HGN++LG +AS+ LFEV+ E+VGY+VL+SN+YA+ GKWEGVDE+RS+A +GL+KTPGWSS+EV+NKV++FYTGN+THP YE++Y EL L AK+K +GYVPD FVLQDVE+DEKEHIL SHSERLAIAF +I++P K+ I+IFKNLRVCGDCH+ TKFIS+ITEREIIVRDSNRFHHFK+G+CSCGDYW Sbjct: 10 RQIPTCKGGRFTRVLQSIGSVIREFSASANALQ---DCWKNGNESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
BLAST of NM_gene55350.t1 vs. ExPASy Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1) HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0 Identity = 300/772 (38.86%), Postives = 460/772 (59.59%), Query Frame = 0 Query: 52 VLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 +L + C+ L ++++ L+ +G + F TKLV+ + G + + F+ I + +++M+ + + L +A+ F + + P Y F +LK C + + GK+IH ++K GF D+F L +MY + N ARK+FD MP RD SWN +++GY Q+G A AL+++ M E + IT+ S+LP + I G IH Y ++ G + + +S L++MY K G + A ++FD M+ER+VVSWNS+I AY Q+ +P A F M G++P ++++ A L D R +H + G +V + N+++ MY K +++A ++F L + ++SWN +I G+AQNG +A+ F M + + TYVS++ A + + IH V+++CL +VFV T LVDMY KCG I A +F + WNA+I +G HG G AL LF +M ++P+ +TF+S+++ACSHSGLV G + F+MM+E + I+ + HYG MVDL GRAG L A +FI MPV+P +++GA+LGAC+IH N+ A++RLFE++ ++ GY+VL++NIY WE V +VR +GL+KTPG S +E+ N+V F++G+ HP +KIY L L +K GYVPD + VL VE D KE +L++HSE+LAI+FG++++ + I + KNLRVC DCHN TK+IS +T REI+VRD RFHHFK+G CSCGDYW Sbjct: 42 LLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDD-VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG-LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS-RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
BLAST of NM_gene55350.t1 vs. ExPASy Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1) HSP 1 Score: 579.326 bits (1492), Expect = 0.000e+0 Identity = 303/741 (40.89%), Postives = 442/741 (59.65%), Query Frame = 0 Query: 83 TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA---CRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 +KL Y N GDL + FD + WN +++ +SG S ++ F + ++SG+ D YTF V K+ R++ G+++H +LK GF V SL+ Y + + ARK+FD+M RD SWN++I+GY +G A + L + +M + G+ +D T+ S+ CA S I G +H +K N L++MY+K G + A VF +M +R VVS+ S+IA Y + A F M++ GI PD+ T+ ++ + A+ + VH +I D+ + NA++DMYAK G + A VF + VKD+ISWNT+I GY++N A+EA+ +F ++ E + ++ T +LPA + + A +G +IH +++N D VA LVDMY KCG + A LF + V W +I+ +G+HG G +A+ LF QM G+ D I+FVSLL ACSHSGLV EG R+F++M+ E I+P ++HY C+VD+ R G L A+ FI+NMP+ PDA+IWGALL CRIH +++L ++++FE++ EN GYYVLM+NIYA KWE V +R RGL+K PG S IE+ +V+IF G+ ++P+ E I LR + A+M GY P + L D EE EKE L HSE+LA+A GIISS I++ KNLRVCGDCH KF+S++T REI++RDSNRFH FKDG CSC +W Sbjct: 133 SKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF-DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871 HSP 2 Score: 247.284 bits (630), Expect = 1.171e-68 Identity = 165/553 (29.84%), Postives = 284/553 (51.36%), Query Frame = 0 Query: 54 FQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT-TMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHM--MQEEFGIKPHLKHYGCM-VDLFGR 597 F S +H ++LH +L SG + LV FY + +R FD ++ R+V +WNS+I+ YV +G + + F Q L SG+ D T V C R + G+ +H +K F + +LL MY + G + A+ +F +M R S+ +MI+GY + G A EA+ + +EM EG+S D TV ++L CA+ + G +H +I ++ L F++FVSN L++MY K G ++ A VF +M +D++SWN+II Y ++ A F +++ PD T+ + A L+ R +HG+IMR G+F D + N++VDMYAK G + A +F+ + KD++SW +I GY +G EAI +F M + I A++ ++VS+L A SH G + +G + + C + V C+VDM + G + A +P + W A++ IH A + ++ + + P++ + L+A + +E +++ + +++ G + K+ GC +++ GR Sbjct: 205 FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM-LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF-SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG-IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE--LEPENTGYYVLMA-----NIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 747 HSP 3 Score: 234.187 bits (596), Expect = 4.311e-64 Identity = 157/536 (29.29%), Postives = 275/536 (51.31%), Query Frame = 0 Query: 101 TFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEG-VRPDHITFVSLLAACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631 TFD R+V N+ + + SG L AV ++ D T VL+ C ++L DGK++ + GF D + + L MY G A ++FD++ + WN +++ +SG+ ++ + +M GV MD T + + + ++ G +H +I+K G V N+L+ Y K + A +VFD+M ERDV+SWNSII Y + F M +GI+ DL T+VS+ + A RAVH ++ + ED N ++DMY+K G ++SA+AVF + + V+S+ ++I GYA+ GLA EA+++F+ MEE I+ + T ++L + L +G ++H + +N L FD+FV+ L+DMY KCG + +A +F ++ + WN +I + + + ++AL+LF +L+E PD T +L AC+ +G+ + ++M+ + H+ + +VD++ + G L +AH ++ + D W ++ +HG Sbjct: 56 TFD----RSVTDANTQLRRFCESGNLENAVKLL---CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE-EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMHG 579
BLAST of NM_gene55350.t1 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2) HSP 1 Score: 575.474 bits (1482), Expect = 0.000e+0 Identity = 303/794 (38.16%), Postives = 469/794 (59.07%), Query Frame = 0 Query: 50 FDVLFQSCTKLHHV---KRLHALLLVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL------VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHG-LEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE----------INANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR-PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 F L ++ L + K++HA + G + +V + LVN Y GD FD IS RN +WNS+IS + A++ F + L + P +T V+ AC NL + GK++H L+ G E + F+ +L+ MY + G ++ L RD +WN ++S CQ+ +EAL+ L EM LEGV D T++S+LP C+ + + +G +H Y +K+G L+ N FV + L++MY + RVFD M +R + WN++IA Y Q+ A F M++ AG+ + T+ + + A+HGF+++RG D + N ++DMY++LG I+ A +F + +D+++WNT+ITGY + +A+ + M+ + N T ++ILP+ + + AL +G +IH IKN L DV V + LVDMY KCG + + +F Q+P+ + + WN +I +G+HG+G +A++L R M+ +GV+P+ +TF+S+ AACSHSG+V EG R F++M+ ++G++P HY C+VDL GRAG + A+ + MP A W +LLGA RIH N+E+G +A+ L +++ +YVL++NIY++ G W+ EVR +++G++K PG S IE ++V F G+ +HP+ EK+ L L +M+ GYVPD S VL +VEEDEKE +L HSE+LAIAFGI+++ P + I++ KNLRVC DCH TKFIS+I +REII+RD RFH FK+G CSCGDYW Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG-LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890 HSP 2 Score: 250.366 bits (638), Expect = 1.185e-69 Identity = 160/543 (29.47%), Postives = 274/543 (50.46%), Query Frame = 0 Query: 108 RNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWD-VFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQ---SDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQM------LDEG-----VRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632 R+ W ++ VRS L EAV + + G++PD Y FP +LKA +L D GK+IH V K G+ D V VA +L+++Y + G K+FD + R+ SWN++IS C AL+ M E V T+ S++ C+ + ++ G +H Y ++ G E N F+ N L+ MY K G + + + RD+V+WN+++++ Q+ + A + M G++PD T+ S+ + L R + +H + ++ G E+ +G+A+VDMY + S R VF+G+ + + WN +I GY+QN EA+ +F MEE + AN T ++PA GA + IH V+K L D FV L+DMY + G+ID AM +F ++ V WN +I+ + H + AL L +M + +G ++P+ IT +++L +C+ +++G+ H + + + +VD++ + G L M+ +P + + W ++ A +HGN Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVL-GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
BLAST of NM_gene55350.t1 vs. ExPASy Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1) HSP 1 Score: 563.533 bits (1451), Expect = 0.000e+0 Identity = 289/777 (37.19%), Postives = 458/777 (58.94%), Query Frame = 0 Query: 48 IDFDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVS-MDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 +DF F+ T + H+ + HA +++ G + TKL ++LG + ++R F + +V+ +N ++ + + ++ F ++ L+P+ T+ + A D G+ IH + G + ++ + ++++ MY +F ARK+FD MP +D WN MISGY ++ VE++ + ++ E + +D T+ ILP A+ + G+ IH K G + +V I++Y+K G I+ +F + + D+V++N++I Y + + + F + +G + TLVSL + L A+HG+ ++ F+ + A+ +Y+KL I SAR +F+ P K + SWN +I+GY QNGL +AI +F+ M++ +E + N T IL A + +GAL G +H V ++V+T L+ MY KCG I +A LF + + + V WN +IS +G+HG G +ALN+F +ML+ G+ P +TF+ +L ACSH+GLV EG F+ M +G +P +KHY CMVD+ GRAGHL A FI+ M + P +S+W LLGACRIH + L S++LFE+D +NVGY+VL+SNI++ + VR A+ R L K PG++ IE+ +F +G+++HP+ ++IY++L L KM+ GY P+ L DVEE+E+E ++ HSERLAIAFG+I++ P + I+I KNLRVC DCH TK IS+ITER I+VRD+NRFHHFKDG+CSCGDYW Sbjct: 24 LDF---FKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSN-FLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK-SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
BLAST of NM_gene55350.t1 vs. ExPASy Swiss-Prot
Match: PP390_ARATH (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1) HSP 1 Score: 547.74 bits (1410), Expect = 0.000e+0 Identity = 313/846 (37.00%), Postives = 474/846 (56.03%), Query Frame = 0 Query: 28 SAAANSLQISPDCLENESGEIDFDVLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI--SYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLR--PDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-----------------------------------AGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFI------MRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVK--DVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCL-CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 +AAA S Q L + S C + VK +H LL G I T+ ++ L++ Y ++G LS + S VY WNS+I Y +G A C Y F L L PD YTFP V KAC + G+ H L GF +VFV +L+ MY R + ARK+FD+M V D SWN++I Y + G AL++ M E G D IT+ ++LP CA G +H + + + N+FV N L++MY K GM+ A VF M +DVVSWN+++A Y Q A F MQ+ +GI+P+ +TL+S+ S A + + + +H + +R+ ++ ++ N ++DMYAK +++ARA+F+ L K DV++W +I GY+Q+G A++A+E+ +M EE + N T L A + + ALR G +IH ++N +FV+ CL+DMY KCG I DA +F + + V W ++++ +G+HG+G++AL +F +M G + D +T + +L ACSHSG++ +G YF+ M+ FG+ P +HY C+VDL GRAG L A I+ MP+ P +W A L CRIHG +ELG A++++ E+ S + G Y L+SN+YAN G+W+ V +RSL R +G+KK PG S +E F+ G++THP ++IY L + ++K +GYVP+ F L DV+++EK+ +L HSE+LA+A+GI+++P + I+I KNLRVCGDCH ++S+I + +II+RDS+RFHHFK+G CSC YW Sbjct: 9 NAAAKSHQYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFG-ILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGC---ANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
BLAST of NM_gene55350.t1 vs. ExPASy Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1) HSP 1 Score: 547.354 bits (1409), Expect = 0.000e+0 Identity = 299/806 (37.10%), Postives = 468/806 (58.06%), Query Frame = 0 Query: 54 FQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLG---DLSFSRHTFDHI-SYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKL-------------------------------GVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 ++C + +K H L G V + TKLV LG LSF++ F++ SY + +NS+I Y SG +EA+ F + + SG+ PD YTFP L AC R +G +IH ++K+G+ D+FV SL+H Y G + ARK+FD+M R+ SW +MI GY + A +A+D+ M R E V+ + +T+ ++ CA+ +++ +G ++ +I G+E N + + L++MY K I A R+FD+ ++ N++ + Y + A G F M +G++PD ++++S S ++L + ++ HG+++R G+ D I NA++DMY K G +++A FE +P K+++SWNT+I+G Q L EAIEVF M+ +NA+ T +SI A H+GAL I+ + KN + DV + T LVDM+ +CG + AMS+F + W A I + G+ ++A+ LF M+++G++PD + FV L ACSH GLV +G+ F+ M + G+ P HYGCMVDL GRAG L A I++MP+ P+ IW +LL ACR+ GN+E+ A A++++ + E G YVL+SN+YA+ G+W + +VR +++GL+K PG SSI++ K F +G+ +HP+ I L ++ + LG+VPD S VL DV+E EK +L+ HSE+LA+A+G+ISS + I+I KNLRVC DCH++ KF S++ REII+RD+NRFH+ + G CSCGD+W Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRM-MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842 HSP 2 Score: 196.438 bits (498), Expect = 3.485e-51 Identity = 145/511 (28.38%), Postives = 242/511 (47.36%), Query Frame = 0 Query: 150 PPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA---NVARKLFDDMPVRDNG-SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG-FFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQ---GIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLD--------------------------------EGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620 P LK C+ + + K H S+ K G + DV L+ C G + A+++F++ +N++I GY SG EA+ + M G+S D T L CA+S +G+ IH I+K G +LFV N+L++ Y + G + A +VFD+M ER+VVSW S+I Y + + A FF ++ + P+ +T+V + S AKL D V+ FI G + D+++ +A+VDMY K I+ A+ +F+ ++ N + + Y + GL EA+ VF +M + + + +S+L A S LR G H V++N + L+DMY KC R D A +F ++ + V WN++++ + +G D A F M + EGV D +T +S+ +AC H G + + ++ + E+ GI+ ++ +VD+F R G A + ++ R D S W Sbjct: 36 PSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD----SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAW 539 HSP 3 Score: 137.887 bits (346), Expect = 4.040e-32 Identity = 117/464 (25.22%), Postives = 208/464 (44.83%), Query Frame = 0 Query: 53 LFQSCTKLHHVK---RLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFE-WD------------------------------VFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMR-LEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAV-HGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVK--DVISWNTLITGYAQNG---LASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHV 472 + +C KL ++ +++A + SG + LV+ Y + ++ FD N+ N+M S YVR G EA+ F + SG+RPD + + +C RN++ GK H VL+ GFE WD V S++ Y G + A + F+ MP ++ SWN +ISG Q EA+++ M+ EGV+ D +T+ SI C + I+ YI K+G++ ++ + L++M+++ G A+ +F+ + RDV +W + I A + + A F M + G++PD + V + + + + + + + G EDV G +VD+ + G++ A + E +P++ DVI WN+L+ G +A+ A E Q++ G+YV + Y+ G K+ + Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMAAYAAEKIQVLAP-----ERTGSYVLLSNVYASAGRWNDMAKVRL 697
BLAST of NM_gene55350.t1 vs. ExPASy Swiss-Prot
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1) HSP 1 Score: 543.888 bits (1400), Expect = 0.000e+0 Identity = 276/753 (36.65%), Postives = 428/753 (56.84%), Query Frame = 0 Query: 77 KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLR-PDFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEWDVFVAAS--LLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVI--IGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS-ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 K S+ +++ + GD+S +R FD + R V TW ++ Y R+ EA F Q +S PD TF +L C + V ++H +KLGF+ + F+ S LL YC ++A LF+++P +D+ ++N +I+GY + G E++ + +MR G T + +L + G +H + G + V N +++ Y+K + +FD+M E D VS+N +I++Y Q++ + FF MQ G ++ SI A L+ + R +H + D I +GN++VDMYAK + A +F+ LP + +SW LI+GY Q GL +++F M N + A+Q T+ ++L A + +L G ++H +I++ +VF + LVDMY KCG I DA+ +F ++P ++V WNA+IS H +G G+ A+ F +M++ G++PD ++ + +L ACSH G V +G YF M +GI P KHY CM+DL GR G A + MP PD +W ++L ACRIH N L A+++LF ++ + YV MSNIYA G+WE V +V+ R+RG+KK P +S +EVN+K+ +F + ++THP ++I ++ LTA+++ GY PD S V+QDV+E K L HSERLA+AF +IS+P PI + KNLR C DCH K IS+I +REI VRD++RFHHF +G+CSCGDYW Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL---LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN-LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825 HSP 2 Score: 154.451 bits (389), Expect = 2.282e-37 Identity = 114/440 (25.91%), Postives = 211/440 (47.95%), Query Frame = 0 Query: 43 NESGEIDFDVLFQSCTKLHHV---KRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDV--IIG--------NAVVDMYAKLGVINSARAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVG 462 ++ + F + ++ LH ++LHAL + +G + ++++FY+ + +R FD + + ++N +IS Y ++ + ++ F + R +F F +L NL G+++HC L + + V SL+ MY + + A +F +P R SW A+ISGY Q G L + +MR + D T A++L A ++L G +H +II+ G N+F + L++MY K G I+ A++VF++M +R+ VSWN++I+A+ + D A G F M ++G+QPD VS+ ++ + C GF+ + + + + I G ++D+ + G A + + +P + D I W++++ + LA A E ME+ + A YVS+ Y+ G Sbjct: 246 HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNF-PFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD---SVSILGVLTACSHC-------GFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAA----YVSMSNIYAAAG 670
BLAST of NM_gene55350.t1 vs. ExPASy Swiss-Prot
Match: PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1) HSP 1 Score: 539.65 bits (1389), Expect = 0.000e+0 Identity = 271/618 (43.85%), Postives = 401/618 (64.89%), Query Frame = 0 Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM------QQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAK--LGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 SWN++I+ +SG++ EAL MR + + + C+ +I SG H G + ++FVS+ LI MY+ G + A +VFD++ +R++VSW S+I Y+ + + + A F + + D + LVS+ S +++ + ++H F+++RG F V +GN ++D YAK G + AR +F+ + KD +S+N++++ YAQ+G+++EA EVF+ + + + N T ++L A SH GALR G IH +VI+ L DV V T ++DMY KCGR++ A F ++ + W A+I+ +G+HGH KAL LF M+D GVRP++ITFVS+LAACSH+GL EG R+F+ M+ FG++P L+HYGCMVDL GRAG L A++ IQ M ++PD+ IW +LL ACRIH N+EL ++ RLFE+DS N GYY+L+S+IYA+ G+W+ V+ VR + ++RGL K PG+S +E+N +V +F G+ HP+ EKIY+ L L K+ GYV + S V DV+E+EKE L HSE+LAIAFGI+++ P S + + KNLRVC DCHN K IS+I +RE +VRD+ RFHHFKDG CSCGDYW Sbjct: 43 SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG-FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659 HSP 2 Score: 209.149 bits (531), Expect = 1.778e-56 Identity = 132/439 (30.07%), Postives = 240/439 (54.67%), Query Frame = 0 Query: 104 HISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRL------EGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGM--IRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAVISCHGIH 527 ++ +V++WNS+I+ RSG +EA+ F S L P +FP +KAC +L D GK+ H G++ D+FV+++L+ MY G ARK+FD++P R+ SW +MI GY +GNA++A+ + ++ + + + +D + + S++ C++ IH ++IK G + + V N L++ Y K G + A ++FDQ++++D VS+NSI++ Y QS A F + + + + +TL ++ V+ R + +H ++R G +DVI+G +++DMY K G + +AR F+ + K+V SW +I GY +G A++A+E+F M + + N T+VS+L A SH G +G + +K + + C+VD+ G+ G + A L ++ + S+ W+++++ IH Sbjct: 35 YVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLS-LYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG-LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYITFVSVLAACSHAGLHVEGWR-WFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469 HSP 3 Score: 153.295 bits (386), Expect = 1.962e-37 Identity = 111/398 (27.89%), Postives = 190/398 (47.74%), Query Frame = 0 Query: 50 FDVLFQSCTKLHHV---KRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTS-----GLRPDFYTFPPVLKAC-RNLVDG--KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN--VARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIG-----------NAVVDMYAKLGVINSARAVFEGLPVK-DVISWNTLITG 421 F ++C+ L + K+ H V G +F S+ L+ Y+ G L +R FD I RN+ +W SMI Y +G +AV F + + D V+ AC R G + IH V+K GF+ V V +LL Y + G VARK+FD + +D S+N+++S Y QSG + EA ++ + + + V+ + IT++++L + S + G IH +I+ GLE ++ V ++I+MY K G + A + FD+M ++V SW ++IA Y A F M +G++P+ +T VS+ + + H + GW + + G +VD+ + G + A + + + +K D I W++L+ Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS-----------HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
BLAST of NM_gene55350.t1 vs. ExPASy Swiss-Prot
Match: PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2) HSP 1 Score: 547.354 bits (1409), Expect = 1.155e-180 Identity = 291/784 (37.12%), Postives = 470/784 (59.95%), Query Frame = 0 Query: 46 GEIDFDVLFQSCTKLHHVK---RLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR-NVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFNLFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM-KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820 G F L ++C KL ++ LH+LL+ G T F LV+ YA DLS +R FD + + WNS++S Y SG+ E ++ F + +T G P+ YT L AC GK+IH SVLK +++V +L+ MY R G A ++ M D +WN++I GY Q+ EAL+ +M G D +++ SI+ + N+L+G+ +H Y+IKHG + NL V N LI+MY+K + + R F +M ++D++SW ++IA Y Q++ + A F + + ++ D + L S+ + L + +H I+R+G D +I N +VD+Y K + A VFE + KDV+SW ++I+ A NG SEA+E+F+ M E ++A+ + IL A + + AL +G +IH +++ C + +A +VDMY CG + A ++F ++ R + + ++I+ +G+HG G A+ LF +M E V PDHI+F++LL ACSH+GL+ EG+ + +M+ E+ ++P +HY C+VD+ GRA + A F++ M P A +W ALL ACR H E+G +A+ RL E++ +N G VL+SN++A G+W V++VR+ + G++K PG S IE++ KV F +++HP+ ++IY++L +T K+ + +GYV D FVL +V+E EK +L HSER+AIA+G++ +P ++ ++I KNLRVC DCH + K +S++ R+I++RD+NRFHHF+ G+CSCGD W Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT-GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL--DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-LSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960 HSP 2 Score: 252.677 bits (644), Expect = 4.700e-70 Identity = 184/668 (27.54%), Postives = 330/668 (49.40%), Query Frame = 0 Query: 3 RLAPSCKDRRLCKLLPLLQAHRPL---------FSAAANSLQISPDCLENESGEIDFDVLFQSCTKLHHV---KRLHALLLVS-GKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DNGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEFN-LFVSNNLINMYTKFGMIRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAKLNDCRNSRAVHGFIMRRGWFMEDVIIGNAVVDMYAKLGVINSARAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINANQGTYVSILPAYSHVGALRQGIKIHVRVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAVISCHGIHGHGDKALNLFRQMLDEGVRPDHITFVSLLAACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651 RL S C+ P Q+++P+ F D EN S F + + C K V ++LH+ + + + F + KLV Y G L + FD + R + WN+MI YV +G + A+ ++ + G+ +FP +LKAC L D G ++H ++KLG+ F+ +L+ MY + + AR+LFD + D WN+++S Y SG ++E L++ EM + G + + T+ S L C G IH ++K + L+V N LI MYT+ G + A R+ QM DVV+WNS+I Y Q+ A FF+ M AG + D +++ S+ + +L++ +H ++++ GW ++ +GN ++DMY+K + F + KD+ISW T+I GYAQN EA+E+F+ + + + ++ SIL A S + ++ +IH +++ L D + LVD+YGKC + A +F + V W ++IS ++G+ +A+ LFR+M++ G+ D + + +L+A + +++G+ + +++++ F ++ + +VD++ G L A + R + +++ A +HG G A + ++ ENV Sbjct: 27 RLHCSIPTEPSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV-EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD-SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA--VAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHG---CGKAAVELFDKMRHENV 684 The following BLAST results are available for this feature:
BLAST of NM_gene55350.t1 vs. ExPASy TrEMBL
Analysis Date: 2023-04-28 (Blastp of Citrus australis v1.0 (UQ) proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of NM_gene55350.t1 vs. Araport11
Analysis Date: 2023-05-04 (Blastp of Citrus limon Eureka v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
BLAST of NM_gene55350.t1 vs. ExPASy Swiss-Prot
Analysis Date: 2023-05-04 (Blastp of Citrus limon Eureka v1.0 proteins vs UniProt Swissprot ) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus limon cv. Eureka v1.0 proteins
Date Performed: 2023-05-01 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >NM_gene55350.t1_cle_v1 ID=NM_gene55350.t1_cle_v1; Name=NM_gene55350.t1; organism=Citrus limon; type=mRNA; length=2769bpback to top protein sequence of NM_gene55350.t1_cle_v1 >NM_gene55350.t1_cle_v1 ID=NM_gene55350.t1_cle_v1; Name=NM_gene55350.t1_cle_v1; organism=Citrus limon; type=polypeptide; length=820bpback to top mRNA from alignment at Chr08B:3336025..3339116+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3092bp; location=Sequence derived from: Chr08B:3336025..3339116+ (Citrus limonback to top Coding sequence (CDS) from alignment at Chr08B:3336025..3339116+ >NM_gene55350.t1_cle_v1 ID=NM_gene55350.t1_cle_v1; Name=NM_gene55350.t1; organism=Citrus limon; type=CDS; length=2463bp; location=Sequence derived from: Chr08B:3336025..3339116+ (Citrus limonback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|